Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:49:46 (3121586): wrapper (7.7.26015): starting
14:49:46 (3121586): wrapper: running run_atlas (--nthreads 4)
[2026-01-25 14:49:46] Arguments: --nthreads 4
[2026-01-25 14:49:46] Threads: 4
[2026-01-25 14:49:46] Checking for CVMFS
[2026-01-25 14:49:46] No cvmfs_config command found, will try listing directly
[2026-01-25 14:49:46] CVMFS is ok
[2026-01-25 14:49:46] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-25 14:49:46] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-25 14:49:46] Further information can be found at the LHC@home message board.
[2026-01-25 14:49:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-25 14:49:46] Checking for apptainer binary...
[2026-01-25 14:49:46] which: no apptainer in ((null))
[2026-01-25 14:49:46] apptainer is not installed, using version from CVMFS
[2026-01-25 14:49:46] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-25 14:49:47] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot56/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut09.grid.cesnet.cz
[2026-01-25 14:49:47] apptainer works
[2026-01-25 14:49:47] Set ATHENA_PROC_NUMBER=4
[2026-01-25 14:49:47] Set ATHENA_CORE_NUMBER=4
[2026-01-25 14:49:47] Starting ATLAS job with PandaID=6980224528
[2026-01-25 14:49:47] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot56/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-25 18:26:46]  *** The last 200 lines of the pilot log: ***
[2026-01-25 18:26:46] 2026-01-25 17:25:50,037 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-25 18:26:46] 2026-01-25 17:25:50,075 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-01-25 18:26:46] 2026-01-25 17:25:50,076 | INFO     | reading metadata from: /scratch/boinc/var/slot56/slots/0/PanDA_Pilot-6980224528/jobReport.json
[2026-01-25 18:26:46] 2026-01-25 17:25:50,078 | INFO     | added worker_node to metadata from /scratch/boinc/var/slot56/slots/0/workernode_map.json
[2026-01-25 18:26:46] 2026-01-25 17:25:50,079 | INFO     | this job has now completed (state=finished)
[2026-01-25 18:26:46] 2026-01-25 17:25:50,079 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-25 18:26:46] 2026-01-25 17:25:50,079 | INFO     | log transfer has been attempted: DONE
[2026-01-25 18:26:46] 2026-01-25 17:25:50,079 | INFO     | job 6980224528 has finished - writing final server update
[2026-01-25 18:26:46] 2026-01-25 17:25:50,079 | WARNING  | failed to read HTCondor job classAd: [Errno 2] No such file or directory: '/scratch/condor/execute/dir_2182217/.job.ad'
[2026-01-25 18:26:46] 2026-01-25 17:25:50,079 | INFO     | total number of processed events: 400 (read)
[2026-01-25 18:26:46] 2026-01-25 17:25:50,092 | INFO     | using path: /scratch/boinc/var/slot56/slots/0/PanDA_Pilot-6980224528/memory_monitor_summary.json (trf name=prmon)
[2026-01-25 18:26:46] 2026-01-25 17:25:50,092 | INFO     | extracted standard info from prmon json
[2026-01-25 18:26:46] 2026-01-25 17:25:50,093 | INFO     | extracted standard memory fields from prmon json
[2026-01-25 18:26:46] 2026-01-25 17:25:50,093 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-25 18:26:46] 2026-01-25 17:25:50,093 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-25 18:26:46] 2026-01-25 17:25:50,093 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-25 18:26:46] 2026-01-25 17:25:50,097 | INFO     | fitting pss+swap vs Time
[2026-01-25 18:26:46] 2026-01-25 17:25:50,097 | INFO     | sum of square deviations: 2954447953.0
[2026-01-25 18:26:46] 2026-01-25 17:25:50,099 | INFO     | sum of deviations: 15639654275.0
[2026-01-25 18:26:46] 2026-01-25 17:25:50,099 | INFO     | mean x: 1769355459.5
[2026-01-25 18:26:46] 2026-01-25 17:25:50,099 | INFO     | mean y: 2338867.103773585
[2026-01-25 18:26:46] 2026-01-25 17:25:50,099 | INFO     | intersect: -9363914360.69975
[2026-01-25 18:26:46] 2026-01-25 17:25:50,100 | INFO     | chi2: 1.3747327748733134
[2026-01-25 18:26:46] 2026-01-25 17:25:50,100 | INFO     | sum of square deviations: 2750295288.0
[2026-01-25 18:26:46] 2026-01-25 17:25:50,101 | INFO     | sum of deviations: 15271752417.0
[2026-01-25 18:26:46] 2026-01-25 17:25:50,101 | INFO     | mean x: 1769355307.0
[2026-01-25 18:26:46] 2026-01-25 17:25:50,102 | INFO     | mean y: 2338592.2512077293
[2026-01-25 18:26:46] 2026-01-25 17:25:50,102 | INFO     | intersect: -9822481420.38775
[2026-01-25 18:26:46] 2026-01-25 17:25:50,102 | INFO     | chi2: 1.3755044868459554
[2026-01-25 18:26:46] 2026-01-25 17:25:50,102 | INFO     | current chi2=1.3755044868459554 (change=-0.05613541676949885 %)
[2026-01-25 18:26:46] 2026-01-25 17:25:50,102 | INFO     | right removable region: 206
[2026-01-25 18:26:46] 2026-01-25 17:25:50,103 | INFO     | sum of square deviations: 2750295288.0
[2026-01-25 18:26:46] 2026-01-25 17:25:50,104 | INFO     | sum of deviations: -10980812947.000002
[2026-01-25 18:26:46] 2026-01-25 17:25:50,104 | INFO     | mean x: 1769355612.0
[2026-01-25 18:26:46] 2026-01-25 17:25:50,104 | INFO     | mean y: 2358503.855072464
[2026-01-25 18:26:46] 2026-01-25 17:25:50,104 | INFO     | intersect: 7066677414.2166395
[2026-01-25 18:26:46] 2026-01-25 17:25:50,105 | INFO     | chi2: 0.07194610215639023
[2026-01-25 18:26:46] 2026-01-25 17:25:50,105 | INFO     | current chi2=0.07194610215639023 (change=94.76653910698968 %)
[2026-01-25 18:26:46] 2026-01-25 17:25:50,105 | INFO     | sum of square deviations: 2555770710.5
[2026-01-25 18:26:46] 2026-01-25 17:25:50,106 | INFO     | sum of deviations: -7063492163.499999
[2026-01-25 18:26:46] 2026-01-25 17:25:50,106 | INFO     | mean x: 1769355764.5
[2026-01-25 18:26:46] 2026-01-25 17:25:50,107 | INFO     | mean y: 2355429.0643564356
[2026-01-25 18:26:46] 2026-01-25 17:25:50,107 | INFO     | intersect: 4892399174.242217
[2026-01-25 18:26:46] 2026-01-25 17:25:50,107 | INFO     | chi2: 0.0625957604411853
[2026-01-25 18:26:46] 2026-01-25 17:25:50,107 | INFO     | current chi2=0.0625957604411853 (change=12.996314511771558 %)
[2026-01-25 18:26:46] 2026-01-25 17:25:50,107 | INFO     | left removable region: 20
[2026-01-25 18:26:46] 2026-01-25 17:25:50,108 | INFO     | sum of square deviations: 1995283922.5
[2026-01-25 18:26:46] 2026-01-25 17:25:50,109 | INFO     | sum of deviations: 2076158972.9999995
[2026-01-25 18:26:46] 2026-01-25 17:25:50,109 | INFO     | mean x: 1769355886.5
[2026-01-25 18:26:46] 2026-01-25 17:25:50,109 | INFO     | mean y: 2347536.3978494625
[2026-01-25 18:26:46] 2026-01-25 17:25:50,109 | INFO     | intersect: -1838725836.0496469
[2026-01-25 18:26:46] 2026-01-25 17:25:50,109 | INFO     | chi2: 0.024085431808276568
[2026-01-25 18:26:46] 2026-01-25 17:25:50,110 | INFO     | current memory leak: 1.04 B/s (using 186 data points, chi2=0.02)
[2026-01-25 18:26:46] 2026-01-25 17:25:50,110 | INFO     | could have reported an average CPU frequency of 2605 MHz (11 samples)
[2026-01-25 18:26:46] 2026-01-25 17:25:50,110 | INFO     | ..............................
[2026-01-25 18:26:46] 2026-01-25 17:25:50,111 | INFO     | . Timing measurements:
[2026-01-25 18:26:46] 2026-01-25 17:25:50,111 | INFO     | . get job = 0 s
[2026-01-25 18:26:46] 2026-01-25 17:25:50,111 | INFO     | . initial setup = 5 s
[2026-01-25 18:26:46] 2026-01-25 17:25:50,111 | INFO     | . payload setup = 6 s
[2026-01-25 18:26:46] 2026-01-25 17:25:50,111 | INFO     | . stage-in = 0 s
[2026-01-25 18:26:46] 2026-01-25 17:25:50,111 | INFO     | . payload execution = 12921 s
[2026-01-25 18:26:46] 2026-01-25 17:25:50,111 | INFO     | . stage-out = 1 s
[2026-01-25 18:26:46] 2026-01-25 17:25:50,111 | INFO     | . log creation = 0 s
[2026-01-25 18:26:46] 2026-01-25 17:25:50,111 | INFO     | ..............................
[2026-01-25 18:26:46] 2026-01-25 17:25:50,584 | INFO     | 
[2026-01-25 18:26:46] 2026-01-25 17:25:50,585 | INFO     | job summary report
[2026-01-25 18:26:46] 2026-01-25 17:25:50,585 | INFO     | --------------------------------------------------
[2026-01-25 18:26:46] 2026-01-25 17:25:50,585 | INFO     | PanDA job id: 6980224528
[2026-01-25 18:26:46] 2026-01-25 17:25:50,585 | INFO     | task id: 48314275
[2026-01-25 18:26:46] 2026-01-25 17:25:50,585 | INFO     | errors: (none)
[2026-01-25 18:26:46] 2026-01-25 17:25:50,585 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-25 18:26:46] 2026-01-25 17:25:50,585 | INFO     | pilot state: finished 
[2026-01-25 18:26:46] 2026-01-25 17:25:50,585 | INFO     | transexitcode: 0
[2026-01-25 18:26:46] 2026-01-25 17:25:50,586 | INFO     | exeerrorcode: 0
[2026-01-25 18:26:46] 2026-01-25 17:25:50,586 | INFO     | exeerrordiag: 
[2026-01-25 18:26:46] 2026-01-25 17:25:50,586 | INFO     | exitcode: 0
[2026-01-25 18:26:46] 2026-01-25 17:25:50,586 | INFO     | exitmsg: OK
[2026-01-25 18:26:46] 2026-01-25 17:25:50,586 | INFO     | cpuconsumptiontime: 50054 s
[2026-01-25 18:26:46] 2026-01-25 17:25:50,586 | INFO     | nevents: 400
[2026-01-25 18:26:46] 2026-01-25 17:25:50,586 | INFO     | neventsw: 0
[2026-01-25 18:26:46] 2026-01-25 17:25:50,586 | INFO     | pid: 3140371
[2026-01-25 18:26:46] 2026-01-25 17:25:50,586 | INFO     | pgrp: 3140371
[2026-01-25 18:26:46] 2026-01-25 17:25:50,586 | INFO     | corecount: 4
[2026-01-25 18:26:46] 2026-01-25 17:25:50,586 | INFO     | event service: False
[2026-01-25 18:26:46] 2026-01-25 17:25:50,586 | INFO     | sizes: {0: 2283936, 1: 2284397, 12: 2284397, 12930: 2314485, 12931: 2314484, 12932: 2323560, 12936: 2323938}
[2026-01-25 18:26:46] 2026-01-25 17:25:50,586 | INFO     | --------------------------------------------------
[2026-01-25 18:26:46] 2026-01-25 17:25:50,587 | INFO     | 
[2026-01-25 18:26:46] 2026-01-25 17:25:50,587 | INFO     | executing command: ls -lF /scratch/boinc/var/slot56/slots/0
[2026-01-25 18:26:46] 2026-01-25 17:25:50,607 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-25 18:26:46] 2026-01-25 17:25:50,608 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-25 18:26:46] 2026-01-25 17:25:50,608 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-25 18:26:46] 2026-01-25 17:25:50,608 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-25 18:26:46] 2026-01-25 17:25:50,608 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-25 18:26:46] 2026-01-25 17:25:50,608 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-25 18:26:46] 2026-01-25 17:25:50,608 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-25 18:26:46] 2026-01-25 17:25:50,608 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-25 18:26:46] 2026-01-25 17:25:50,608 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-25 18:26:46] 2026-01-25 17:25:50,608 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-25 18:26:46] 2026-01-25 17:25:50,608 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-25 18:26:46] 2026-01-25 17:25:50,608 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-25 18:26:46] 2026-01-25 17:25:50,609 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-25 18:26:46] 2026-01-25 17:25:50,609 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-25 18:26:46] 2026-01-25 17:25:50,609 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-25 18:26:46] 2026-01-25 17:25:50,609 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-25 18:26:46] 2026-01-25 17:25:50,609 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-25 18:26:46] 2026-01-25 17:25:50,609 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-25 18:26:46] 2026-01-25 17:25:50,609 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-25 18:26:46] 2026-01-25 17:25:50,609 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-25 18:26:46] 2026-01-25 17:25:50,609 | INFO     | job 6980224528 has completed (purged errors)
[2026-01-25 18:26:46] 2026-01-25 17:25:50,610 | INFO     | overall cleanup function is called
[2026-01-25 18:26:46] 2026-01-25 17:25:51,617 | INFO     | --- collectZombieJob: --- 10, [3140371]
[2026-01-25 18:26:46] 2026-01-25 17:25:51,617 | INFO     | zombie collector waiting for pid 3140371
[2026-01-25 18:26:46] 2026-01-25 17:25:51,617 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-25 18:26:46] 2026-01-25 17:25:51,617 | INFO     | collected zombie processes
[2026-01-25 18:26:46] 2026-01-25 17:25:51,617 | INFO     | will attempt to kill all subprocesses of pid=3140371
[2026-01-25 18:26:46] 2026-01-25 17:25:52,013 | INFO     | process IDs to be killed: [3140371] (in reverse order)
[2026-01-25 18:26:46] 2026-01-25 17:25:52,133 | WARNING  | found no corresponding commands to process id(s)
[2026-01-25 18:26:46] 2026-01-25 17:25:52,134 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-25 18:26:46] 2026-01-25 17:25:52,147 | INFO     | did not find any defunct processes belonging to 3140371
[2026-01-25 18:26:46] 2026-01-25 17:25:52,161 | INFO     | did not find any defunct processes belonging to 3140371
[2026-01-25 18:26:46] 2026-01-25 17:25:52,161 | INFO     | ready for new job
[2026-01-25 18:26:46] 2026-01-25 17:25:52,161 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-25 18:26:46] 2026-01-25 17:25:52,164 | INFO     | **************************************
[2026-01-25 18:26:46] 2026-01-25 17:25:52,164 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-25 18:26:46] 2026-01-25 17:25:52,164 | INFO     | **************************************
[2026-01-25 18:26:46] 2026-01-25 17:25:52,164 | INFO     | 
[2026-01-25 18:26:46] 2026-01-25 17:25:52,168 | INFO     | architecture information:
[2026-01-25 18:26:46] 2026-01-25 17:25:52,169 | INFO     | executing command: cat /etc/os-release
[2026-01-25 18:26:46] 2026-01-25 17:25:52,189 | INFO     | cat /etc/os-release:
[2026-01-25 18:26:46] NAME="CentOS Linux"
[2026-01-25 18:26:46] VERSION="7 (Core)"
[2026-01-25 18:26:46] ID="centos"
[2026-01-25 18:26:46] ID_LIKE="rhel fedora"
[2026-01-25 18:26:46] VERSION_ID="7"
[2026-01-25 18:26:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-25 18:26:46] ANSI_COLOR="0;31"
[2026-01-25 18:26:46] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-25 18:26:46] HOME_URL="https://www.centos.org/"
[2026-01-25 18:26:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-25 18:26:46] 
[2026-01-25 18:26:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-25 18:26:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-25 18:26:46] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-25 18:26:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-25 18:26:46] 
[2026-01-25 18:26:46] 2026-01-25 17:25:52,189 | INFO     | **************************************
[2026-01-25 18:26:46] 2026-01-25 17:25:52,692 | INFO     | executing command: df -mP /scratch/boinc/var/slot56/slots/0
[2026-01-25 18:26:46] 2026-01-25 17:25:52,708 | INFO     | sufficient remaining disk space (665424232448 B)
[2026-01-25 18:26:46] 2026-01-25 17:25:52,709 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-25 18:26:46] 2026-01-25 17:25:52,709 | INFO     | current server update state: UPDATING_FINAL
[2026-01-25 18:26:46] 2026-01-25 17:25:52,709 | INFO     | update_server=False
[2026-01-25 18:26:46] 2026-01-25 17:25:52,709 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-25 18:26:46] 2026-01-25 17:25:53,221 | INFO     | all data control threads have been joined
[2026-01-25 18:26:46] 2026-01-25 17:25:53,545 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-25 18:26:46] 2026-01-25 17:25:53,546 | INFO     | aborting loop
[2026-01-25 18:26:46] 2026-01-25 17:25:53,714 | INFO     | [job] retrieve thread has finished
[2026-01-25 18:26:46] 2026-01-25 17:25:53,794 | INFO     | [payload] validate_post thread has finished
[2026-01-25 18:26:46] 2026-01-25 17:25:53,889 | INFO     | [payload] validate_pre thread has finished
[2026-01-25 18:26:46] 2026-01-25 17:25:54,078 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-25 18:26:46] 2026-01-25 17:25:54,119 | INFO     | all payload control threads have been joined
[2026-01-25 18:26:46] 2026-01-25 17:25:54,162 | INFO     | [payload] execute_payloads thread has finished
[2026-01-25 18:26:46] 2026-01-25 17:25:54,226 | INFO     | [data] control thread has finished
[2026-01-25 18:26:46] 2026-01-25 17:25:54,233 | INFO     | [data] copytool_in thread has finished
[2026-01-25 18:26:46] 2026-01-25 17:25:54,239 | INFO     | all job control threads have been joined
[2026-01-25 18:26:46] 2026-01-25 17:25:54,401 | INFO     | [payload] failed_post thread has finished
[2026-01-25 18:26:46] 2026-01-25 17:25:54,553 | INFO     | [job] job monitor thread has finished
[2026-01-25 18:26:46] 2026-01-25 17:25:54,847 | INFO     | [job] create_data_payload thread has finished
[2026-01-25 18:26:46] 2026-01-25 17:25:54,966 | INFO     | [job] validate thread has finished
[2026-01-25 18:26:46] 2026-01-25 17:25:55,125 | INFO     | [payload] control thread has finished
[2026-01-25 18:26:46] 2026-01-25 17:25:55,214 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-25 18:26:46] 2026-01-25 17:25:55,244 | INFO     | [job] control thread has finished
[2026-01-25 18:26:46] 2026-01-25 17:25:55,381 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-25 18:26:46] 2026-01-25 17:25:56,083 | INFO     | [data] copytool_out thread has finished
[2026-01-25 18:26:46] 2026-01-25 17:25:56,219 | INFO     | [job] queue monitor thread has finished
[2026-01-25 18:26:46] 2026-01-25 17:25:59,386 | INFO     | [data] queue_monitor thread has finished
[2026-01-25 18:26:46] 2026-01-25 17:26:03,028 | INFO     | job.realtimelogging is not enabled
[2026-01-25 18:26:46] 2026-01-25 17:26:04,033 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-25 18:26:46] 2026-01-25 17:26:22,274 | INFO     | [monitor] cgroup control has ended
[2026-01-25 18:26:46] 2026-01-25 17:26:23,047 | INFO     | PID=3128436 has CPU usage=6.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-25 18:26:46] 2026-01-25 17:26:23,047 | INFO     | .. there are 4 such processes running
[2026-01-25 18:26:46] 2026-01-25 17:26:23,047 | INFO     | found 0 job(s) in 20 queues
[2026-01-25 18:26:46] 2026-01-25 17:26:23,047 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-25 18:26:46] 2026-01-25 17:26:23,047 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-25 18:26:46] 2026-01-25 17:26:24,223 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23404455032640)>', '<ExcThread(monitor, started 23403880773376)>']
[2026-01-25 18:26:46] 2026-01-25 17:26:25,057 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-25 18:26:46] 2026-01-25 17:26:25,057 | INFO     | [monitor] control thread has ended
[2026-01-25 18:26:46] 2026-01-25 17:26:29,249 | INFO     | all workflow threads have been joined
[2026-01-25 18:26:46] 2026-01-25 17:26:29,249 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-25 18:26:46] 2026-01-25 17:26:29,249 | INFO     | traces error code: 0
[2026-01-25 18:26:46] 2026-01-25 17:26:29,249 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-25 18:26:46] 2026-01-25 17:26:29,396 [wrapper] ==== pilot stdout END ====
[2026-01-25 18:26:46] 2026-01-25 17:26:29,400 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-25 18:26:46] 2026-01-25 17:26:29,402 [wrapper] pilotpid: 3128436
[2026-01-25 18:26:46] 2026-01-25 17:26:29,405 [wrapper] Pilot exit status: 0
[2026-01-25 18:26:46] 2026-01-25 17:26:29,417 [wrapper] pandaids: 6980224528
[2026-01-25 18:26:46] 2026-01-25 17:26:29,494 [wrapper] cleanup supervisor_pilot 3266823 3128437
[2026-01-25 18:26:46] 2026-01-25 17:26:29,497 [wrapper] Test setup, not cleaning
[2026-01-25 18:26:46] 2026-01-25 17:26:29,501 [wrapper] apfmon messages muted
[2026-01-25 18:26:46] 2026-01-25 17:26:29,504 [wrapper] ==== wrapper stdout END ====
[2026-01-25 18:26:46] 2026-01-25 17:26:29,507 [wrapper] ==== wrapper stderr END ====
[2026-01-25 18:26:46]  *** Error codes and diagnostics ***
[2026-01-25 18:26:46]     "exeErrorCode": 0,
[2026-01-25 18:26:46]     "exeErrorDiag": "",
[2026-01-25 18:26:46]     "pilotErrorCode": 0,
[2026-01-25 18:26:46]     "pilotErrorDiag": "",
[2026-01-25 18:26:46]  *** Listing of results directory ***
[2026-01-25 18:26:46] total 409316
[2026-01-25 18:26:46] -rwx------ 1 boinc boinc     36322 Jan 24 02:54 runpilot2-wrapper.sh
[2026-01-25 18:26:46] -rw-r--r-- 1 boinc boinc      5111 Jan 24 02:57 queuedata.json
[2026-01-25 18:26:46] -rw-r--r-- 1 boinc boinc    584422 Jan 24 02:57 pilot3.tar.gz
[2026-01-25 18:26:46] -rw-r--r-- 1 boinc boinc       100 Jan 25 14:49 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-25 18:26:46] -rwxr-xr-x 1 boinc boinc      7986 Jan 25 14:49 run_atlas
[2026-01-25 18:26:46] -rw-r--r-- 1 boinc boinc       105 Jan 25 14:49 job.xml
[2026-01-25 18:26:46] -rw-r--r-- 2 boinc boinc 246837870 Jan 25 14:49 EVNT.48314273._000001.pool.root.1
[2026-01-25 18:26:46] -rw-r--r-- 1 boinc boinc      6639 Jan 25 14:49 init_data.xml
[2026-01-25 18:26:46] -rw-r--r-- 2 boinc boinc     15845 Jan 25 14:49 start_atlas.sh
[2026-01-25 18:26:46] drwxrwx--x 2 boinc boinc      4096 Jan 25 14:49 shared
[2026-01-25 18:26:46] -rw-r--r-- 2 boinc boinc    597760 Jan 25 14:49 input.tar.gz
[2026-01-25 18:26:46] -rw-r--r-- 1 boinc boinc         0 Jan 25 14:49 boinc_lockfile
[2026-01-25 18:26:46] -rw-r--r-- 1 boinc boinc      2607 Jan 25 14:49 pandaJob.out
[2026-01-25 18:26:46] -rw------- 1 boinc boinc   1004254 Jan 25 14:49 agis_schedconf.cvmfs.json
[2026-01-25 18:26:46] -rw------- 1 boinc boinc       452 Jan 25 14:50 workernode_map.json
[2026-01-25 18:26:46] drwx------ 5 boinc boinc      4096 Jan 25 14:50 pilot3
[2026-01-25 18:26:46] -rw-r--r-- 1 boinc boinc       528 Jan 25 18:25 boinc_task_state.xml
[2026-01-25 18:26:46] -rw------- 1 boinc boinc 163906170 Jan 25 18:25 HITS.48314275._000022.pool.root.1
[2026-01-25 18:26:46] -rw------- 1 boinc boinc      1035 Jan 25 18:25 memory_monitor_summary.json
[2026-01-25 18:26:46] -rw------- 1 boinc boinc   1516246 Jan 25 18:25 agis_ddmendpoints.agis.ALL.json
[2026-01-25 18:26:46] -rw------- 1 boinc boinc    396680 Jan 25 18:25 log.48314275._000022.job.log.tgz.1
[2026-01-25 18:26:46] -rw------- 1 boinc boinc        95 Jan 25 18:25 pilot_heartbeat.json
[2026-01-25 18:26:46] -rw------- 1 boinc boinc      6399 Jan 25 18:25 heartbeat.json
[2026-01-25 18:26:46] -rw------- 1 boinc boinc      4901 Jan 25 18:26 pilotlog.txt
[2026-01-25 18:26:46] -rw------- 1 boinc boinc   1829702 Jan 25 18:26 log.48314275._000022.job.log.1
[2026-01-25 18:26:46] -rw------- 1 boinc boinc       357 Jan 25 18:26 output.list
[2026-01-25 18:26:46] -rw-r--r-- 1 boinc boinc       620 Jan 25 18:26 runtime_log
[2026-01-25 18:26:46] -rw------- 1 boinc boinc   2242560 Jan 25 18:26 result.tar.gz
[2026-01-25 18:26:46] -rw-r--r-- 1 boinc boinc      9205 Jan 25 18:26 runtime_log.err
[2026-01-25 18:26:46] -rw------- 1 boinc boinc       665 Jan 25 18:26 DERMDms1h38nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmPC4KDmnPZukn.diag
[2026-01-25 18:26:46] -rw-r--r-- 1 boinc boinc        26 Jan 25 18:26 wrapper_checkpoint.txt
[2026-01-25 18:26:46] -rw-r--r-- 1 boinc boinc      8192 Jan 25 18:26 boinc_mmap_file
[2026-01-25 18:26:46] -rw-r--r-- 1 boinc boinc     21144 Jan 25 18:26 stderr.txt
[2026-01-25 18:26:46] HITS file was successfully produced:
[2026-01-25 18:26:46] -rw------- 1 boinc boinc 163906170 Jan 25 18:25 shared/HITS.pool.root.1
[2026-01-25 18:26:46]  *** Contents of shared directory: ***
[2026-01-25 18:26:46] total 403924
[2026-01-25 18:26:46] -rw-r--r-- 2 boinc boinc 246837870 Jan 25 14:49 ATLAS.root_0
[2026-01-25 18:26:46] -rw-r--r-- 2 boinc boinc     15845 Jan 25 14:49 start_atlas.sh
[2026-01-25 18:26:46] -rw-r--r-- 2 boinc boinc    597760 Jan 25 14:49 input.tar.gz
[2026-01-25 18:26:46] -rw------- 1 boinc boinc 163906170 Jan 25 18:25 HITS.pool.root.1
[2026-01-25 18:26:46] -rw------- 1 boinc boinc   2242560 Jan 25 18:26 result.tar.gz
18:26:48 (3121586): run_atlas exited; CPU time 50671.143164
18:26:48 (3121586): called boinc_finish(0)

</stderr_txt>
]]>

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