Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:39:09 (25138): wrapper (7.7.26015): starting
14:39:09 (25138): wrapper: running run_atlas (--nthreads 8)
[2026-01-24 14:39:09] Arguments: --nthreads 8
[2026-01-24 14:39:09] Threads: 8
[2026-01-24 14:39:09] Checking for CVMFS
[2026-01-24 14:39:10] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-24 14:39:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-24 14:39:11] Running cvmfs_config stat atlas.cern.ch
[2026-01-24 14:39:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-24 14:39:13] 2.11.2.0 32117 57087 130548 155474 1 54 18559498 25165825 1060 130560 0 22325592 99.827 14857880 3104 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-24 14:39:13] CVMFS is ok
[2026-01-24 14:39:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-24 14:39:13] Checking for apptainer binary...
[2026-01-24 14:39:13] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-24 14:39:13] Running /usr/bin/apptainer --version
[2026-01-24 14:39:13] apptainer version 1.3.2-1.el7
[2026-01-24 14:39:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-24 14:39:30] cg-vwn477.simple-grid.lan
[2026-01-24 14:39:30] apptainer works
[2026-01-24 14:39:30] Set ATHENA_PROC_NUMBER=8
[2026-01-24 14:39:30] Set ATHENA_CORE_NUMBER=8
[2026-01-24 14:39:30] Starting ATLAS job with PandaID=6980226480
[2026-01-24 14:39:30] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-24 20:03:26]  *** The last 200 lines of the pilot log: ***
[2026-01-24 20:03:26] 2026-01-24 19:02:21,493 | INFO     | total number of processed events: 400 (read)
[2026-01-24 20:03:26] 2026-01-24 19:02:21,495 | INFO     | using path: /var/lib/boinc/slots/4/PanDA_Pilot-6980226480/memory_monitor_summary.json (trf name=prmon)
[2026-01-24 20:03:26] 2026-01-24 19:02:21,496 | INFO     | extracted standard info from prmon json
[2026-01-24 20:03:26] 2026-01-24 19:02:21,496 | INFO     | extracted standard memory fields from prmon json
[2026-01-24 20:03:26] 2026-01-24 19:02:21,496 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-24 20:03:26] 2026-01-24 19:02:21,496 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-24 20:03:26] 2026-01-24 19:02:21,496 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-24 20:03:26] 2026-01-24 19:02:21,503 | INFO     | fitting pss+swap vs Time
[2026-01-24 20:03:26] 2026-01-24 19:02:21,503 | INFO     | sum of square deviations: 8971993338.0
[2026-01-24 20:03:26] 2026-01-24 19:02:21,507 | INFO     | sum of deviations: 182745515625.00018
[2026-01-24 20:03:26] 2026-01-24 19:02:21,507 | INFO     | mean x: 1769271958.0
[2026-01-24 20:03:26] 2026-01-24 19:02:21,507 | INFO     | mean y: 2449551.895765472
[2026-01-24 20:03:26] 2026-01-24 19:02:21,507 | INFO     | intersect: -36034861674.82415
[2026-01-24 20:03:26] 2026-01-24 19:02:21,508 | INFO     | chi2: 6.926993044672456
[2026-01-24 20:03:26] 2026-01-24 19:02:21,508 | INFO     | sum of square deviations: 8540720135.5
[2026-01-24 20:03:26] 2026-01-24 19:02:21,511 | INFO     | sum of deviations: 179461652604.99997
[2026-01-24 20:03:26] 2026-01-24 19:02:21,511 | INFO     | mean x: 1769271805.5
[2026-01-24 20:03:26] 2026-01-24 19:02:21,512 | INFO     | mean y: 2448390.6754966886
[2026-01-24 20:03:26] 2026-01-24 19:02:21,512 | INFO     | intersect: -37174327933.218605
[2026-01-24 20:03:26] 2026-01-24 19:02:21,513 | INFO     | chi2: 6.9345753602780835
[2026-01-24 20:03:26] 2026-01-24 19:02:21,513 | INFO     | current chi2=6.9345753602780835 (change=-0.10946041892533323 %)
[2026-01-24 20:03:26] 2026-01-24 19:02:21,513 | INFO     | right removable region: 301
[2026-01-24 20:03:26] 2026-01-24 19:02:21,514 | INFO     | sum of square deviations: 8540720135.5
[2026-01-24 20:03:26] 2026-01-24 19:02:21,517 | INFO     | sum of deviations: 75858456341.49998
[2026-01-24 20:03:26] 2026-01-24 19:02:21,517 | INFO     | mean x: 1769272110.5
[2026-01-24 20:03:26] 2026-01-24 19:02:21,517 | INFO     | mean y: 2487328.7516556294
[2026-01-24 20:03:26] 2026-01-24 19:02:21,518 | INFO     | intersect: -15712142002.413107
[2026-01-24 20:03:26] 2026-01-24 19:02:21,518 | INFO     | chi2: 2.1133773912721474
[2026-01-24 20:03:26] 2026-01-24 19:02:21,518 | INFO     | current chi2=2.1133773912721474 (change=69.49069563600119 %)
[2026-01-24 20:03:26] 2026-01-24 19:02:21,519 | INFO     | sum of square deviations: 8123493708.0
[2026-01-24 20:03:26] 2026-01-24 19:02:21,522 | INFO     | sum of deviations: 8570990195.999996
[2026-01-24 20:03:26] 2026-01-24 19:02:21,522 | INFO     | mean x: 1769272263.0
[2026-01-24 20:03:26] 2026-01-24 19:02:21,523 | INFO     | mean y: 2511848.1245791246
[2026-01-24 20:03:26] 2026-01-24 19:02:21,523 | INFO     | intersect: -1864223791.160011
[2026-01-24 20:03:26] 2026-01-24 19:02:21,523 | INFO     | chi2: 0.1251286412016559
[2026-01-24 20:03:26] 2026-01-24 19:02:21,523 | INFO     | current chi2=0.1251286412016559 (change=94.07920981276634 %)
[2026-01-24 20:03:26] 2026-01-24 19:02:21,524 | INFO     | sum of square deviations: 7720081493.0
[2026-01-24 20:03:26] 2026-01-24 19:02:21,527 | INFO     | sum of deviations: 1302052655.4999993
[2026-01-24 20:03:26] 2026-01-24 19:02:21,527 | INFO     | mean x: 1769272415.5
[2026-01-24 20:03:26] 2026-01-24 19:02:21,527 | INFO     | mean y: 2514583.6746575343
[2026-01-24 20:03:26] 2026-01-24 19:02:21,528 | INFO     | intersect: -295887168.81895095
[2026-01-24 20:03:26] 2026-01-24 19:02:21,528 | INFO     | chi2: 0.09762433969909627
[2026-01-24 20:03:26] 2026-01-24 19:02:21,528 | INFO     | current chi2=0.09762433969909627 (change=21.98082008917048 %)
[2026-01-24 20:03:26] 2026-01-24 19:02:21,529 | INFO     | left removable region: 30
[2026-01-24 20:03:26] 2026-01-24 19:02:21,529 | INFO     | sum of square deviations: 6171352920.0
[2026-01-24 20:03:26] 2026-01-24 19:02:21,532 | INFO     | sum of deviations: 18402585224.999996
[2026-01-24 20:03:26] 2026-01-24 19:02:21,532 | INFO     | mean x: 1769272690.0
[2026-01-24 20:03:26] 2026-01-24 19:02:21,532 | INFO     | mean y: 2507215.89298893
[2026-01-24 20:03:26] 2026-01-24 19:02:21,533 | INFO     | intersect: -5273352370.498968
[2026-01-24 20:03:26] 2026-01-24 19:02:21,533 | INFO     | chi2: 0.0021798012079530483
[2026-01-24 20:03:26] 2026-01-24 19:02:21,533 | INFO     | current memory leak: 2.98 B/s (using 271 data points, chi2=0.00)
[2026-01-24 20:03:26] 2026-01-24 19:02:21,534 | INFO     | could have reported an average CPU frequency of 2249 MHz (14 samples)
[2026-01-24 20:03:26] 2026-01-24 19:02:21,534 | INFO     | ..............................
[2026-01-24 20:03:26] 2026-01-24 19:02:21,534 | INFO     | . Timing measurements:
[2026-01-24 20:03:26] 2026-01-24 19:02:21,535 | INFO     | . get job = 0 s
[2026-01-24 20:03:26] 2026-01-24 19:02:21,535 | INFO     | . initial setup = 115 s
[2026-01-24 20:03:26] 2026-01-24 19:02:21,535 | INFO     | . payload setup = 149 s
[2026-01-24 20:03:26] 2026-01-24 19:02:21,535 | INFO     | . stage-in = 0 s
[2026-01-24 20:03:26] 2026-01-24 19:02:21,535 | INFO     | . payload execution = 18821 s
[2026-01-24 20:03:26] 2026-01-24 19:02:21,535 | INFO     | . stage-out = 2 s
[2026-01-24 20:03:26] 2026-01-24 19:02:21,535 | INFO     | . log creation = 0 s
[2026-01-24 20:03:26] 2026-01-24 19:02:21,535 | INFO     | ..............................
[2026-01-24 20:03:26] 2026-01-24 19:02:21,654 | INFO     | 
[2026-01-24 20:03:26] 2026-01-24 19:02:21,654 | INFO     | job summary report
[2026-01-24 20:03:26] 2026-01-24 19:02:21,654 | INFO     | --------------------------------------------------
[2026-01-24 20:03:26] 2026-01-24 19:02:21,654 | INFO     | PanDA job id: 6980226480
[2026-01-24 20:03:26] 2026-01-24 19:02:21,654 | INFO     | task id: 48314417
[2026-01-24 20:03:26] 2026-01-24 19:02:21,655 | INFO     | errors: (none)
[2026-01-24 20:03:26] 2026-01-24 19:02:21,655 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-24 20:03:26] 2026-01-24 19:02:21,655 | INFO     | pilot state: finished 
[2026-01-24 20:03:26] 2026-01-24 19:02:21,655 | INFO     | transexitcode: 0
[2026-01-24 20:03:26] 2026-01-24 19:02:21,655 | INFO     | exeerrorcode: 0
[2026-01-24 20:03:26] 2026-01-24 19:02:21,655 | INFO     | exeerrordiag: 
[2026-01-24 20:03:26] 2026-01-24 19:02:21,655 | INFO     | exitcode: 0
[2026-01-24 20:03:26] 2026-01-24 19:02:21,655 | INFO     | exitmsg: OK
[2026-01-24 20:03:26] 2026-01-24 19:02:21,656 | INFO     | cpuconsumptiontime: 72646 s
[2026-01-24 20:03:26] 2026-01-24 19:02:21,656 | INFO     | nevents: 400
[2026-01-24 20:03:26] 2026-01-24 19:02:21,656 | INFO     | neventsw: 0
[2026-01-24 20:03:26] 2026-01-24 19:02:21,656 | INFO     | pid: 1199
[2026-01-24 20:03:26] 2026-01-24 19:02:21,656 | INFO     | pgrp: 1199
[2026-01-24 20:03:26] 2026-01-24 19:02:21,656 | INFO     | corecount: 8
[2026-01-24 20:03:26] 2026-01-24 19:02:21,656 | INFO     | event service: False
[2026-01-24 20:03:26] 2026-01-24 19:02:21,656 | INFO     | sizes: {0: 2283255, 1: 2283940, 2: 2284401, 13: 2284401, 18974: 2317060, 18977: 2326058, 18978: 2326242, 18980: 2326436}
[2026-01-24 20:03:26] 2026-01-24 19:02:21,656 | INFO     | --------------------------------------------------
[2026-01-24 20:03:26] 2026-01-24 19:02:21,657 | INFO     | 
[2026-01-24 20:03:26] 2026-01-24 19:02:21,657 | INFO     | executing command: ls -lF /var/lib/boinc/slots/4
[2026-01-24 20:03:26] 2026-01-24 19:02:21,700 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-24 20:03:26] 2026-01-24 19:02:21,701 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-24 20:03:26] 2026-01-24 19:02:21,701 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-24 20:03:26] 2026-01-24 19:02:21,701 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-24 20:03:26] 2026-01-24 19:02:21,701 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-24 20:03:26] 2026-01-24 19:02:21,701 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-24 20:03:26] 2026-01-24 19:02:21,701 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-24 20:03:26] 2026-01-24 19:02:21,702 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-24 20:03:26] 2026-01-24 19:02:21,702 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-24 20:03:26] 2026-01-24 19:02:21,702 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-24 20:03:26] 2026-01-24 19:02:21,702 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-24 20:03:26] 2026-01-24 19:02:21,702 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-24 20:03:26] 2026-01-24 19:02:21,702 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-24 20:03:26] 2026-01-24 19:02:21,702 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-24 20:03:26] 2026-01-24 19:02:21,703 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-24 20:03:26] 2026-01-24 19:02:21,703 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-24 20:03:26] 2026-01-24 19:02:21,703 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-24 20:03:26] 2026-01-24 19:02:21,703 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-24 20:03:26] 2026-01-24 19:02:21,703 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-24 20:03:26] 2026-01-24 19:02:21,703 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-24 20:03:26] 2026-01-24 19:02:21,703 | INFO     | job 6980226480 has completed (purged errors)
[2026-01-24 20:03:26] 2026-01-24 19:02:21,704 | INFO     | overall cleanup function is called
[2026-01-24 20:03:26] 2026-01-24 19:02:22,712 | INFO     | --- collectZombieJob: --- 10, [1199]
[2026-01-24 20:03:26] 2026-01-24 19:02:22,712 | INFO     | zombie collector waiting for pid 1199
[2026-01-24 20:03:26] 2026-01-24 19:02:22,712 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-24 20:03:26] 2026-01-24 19:02:22,712 | INFO     | collected zombie processes
[2026-01-24 20:03:26] 2026-01-24 19:02:22,712 | INFO     | will attempt to kill all subprocesses of pid=1199
[2026-01-24 20:03:26] 2026-01-24 19:02:22,779 | INFO     | process IDs to be killed: [1199] (in reverse order)
[2026-01-24 20:03:26] 2026-01-24 19:02:22,841 | WARNING  | found no corresponding commands to process id(s)
[2026-01-24 20:03:26] 2026-01-24 19:02:22,842 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-24 20:03:26] 2026-01-24 19:02:22,844 | INFO     | did not find any defunct processes belonging to 1199
[2026-01-24 20:03:26] 2026-01-24 19:02:22,845 | INFO     | did not find any defunct processes belonging to 1199
[2026-01-24 20:03:26] 2026-01-24 19:02:22,846 | INFO     | ready for new job
[2026-01-24 20:03:26] 2026-01-24 19:02:22,846 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-24 20:03:26] 2026-01-24 19:02:22,848 | INFO     | **************************************
[2026-01-24 20:03:26] 2026-01-24 19:02:22,848 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-24 20:03:26] 2026-01-24 19:02:22,848 | INFO     | **************************************
[2026-01-24 20:03:26] 2026-01-24 19:02:22,848 | INFO     | 
[2026-01-24 20:03:26] 2026-01-24 19:02:22,849 | INFO     | pilot is running in a VM
[2026-01-24 20:03:26] 2026-01-24 19:02:22,849 | INFO     | architecture information:
[2026-01-24 20:03:26] 2026-01-24 19:02:22,850 | INFO     | executing command: cat /etc/os-release
[2026-01-24 20:03:26] 2026-01-24 19:02:22,867 | INFO     | cat /etc/os-release:
[2026-01-24 20:03:26] NAME="CentOS Linux"
[2026-01-24 20:03:26] VERSION="7 (Core)"
[2026-01-24 20:03:26] ID="centos"
[2026-01-24 20:03:26] ID_LIKE="rhel fedora"
[2026-01-24 20:03:26] VERSION_ID="7"
[2026-01-24 20:03:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-24 20:03:26] ANSI_COLOR="0;31"
[2026-01-24 20:03:26] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-24 20:03:26] HOME_URL="https://www.centos.org/"
[2026-01-24 20:03:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-24 20:03:26] 
[2026-01-24 20:03:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-24 20:03:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-24 20:03:26] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-24 20:03:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-24 20:03:26] 
[2026-01-24 20:03:26] 2026-01-24 19:02:22,868 | INFO     | **************************************
[2026-01-24 20:03:26] 2026-01-24 19:02:23,371 | INFO     | executing command: df -mP /var/lib/boinc/slots/4
[2026-01-24 20:03:26] 2026-01-24 19:02:23,390 | INFO     | sufficient remaining disk space (493553188864 B)
[2026-01-24 20:03:26] 2026-01-24 19:02:23,391 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-24 20:03:26] 2026-01-24 19:02:23,391 | INFO     | current server update state: UPDATING_FINAL
[2026-01-24 20:03:26] 2026-01-24 19:02:23,391 | INFO     | update_server=False
[2026-01-24 20:03:26] 2026-01-24 19:02:23,391 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-24 20:03:26] 2026-01-24 19:02:23,392 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-24 20:03:26] 2026-01-24 19:02:23,636 | INFO     | all payload control threads have been joined
[2026-01-24 20:03:26] 2026-01-24 19:02:23,723 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-24 20:03:26] 2026-01-24 19:02:23,853 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-24 20:03:26] 2026-01-24 19:02:23,853 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-24 20:03:26] 2026-01-24 19:02:23,853 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-24 20:03:26] 2026-01-24 19:02:23,854 | INFO     | will abort loop
[2026-01-24 20:03:26] 2026-01-24 19:02:23,969 | INFO     | all job control threads have been joined
[2026-01-24 20:03:26] 2026-01-24 19:02:24,260 | INFO     | all data control threads have been joined
[2026-01-24 20:03:26] 2026-01-24 19:02:24,397 | INFO     | [job] retrieve thread has finished
[2026-01-24 20:03:26] 2026-01-24 19:02:24,398 | INFO     | [job] queue monitor thread has finished
[2026-01-24 20:03:26] 2026-01-24 19:02:24,570 | INFO     | [payload] failed_post thread has finished
[2026-01-24 20:03:26] 2026-01-24 19:02:24,633 | INFO     | [payload] validate_post thread has finished
[2026-01-24 20:03:26] 2026-01-24 19:02:24,642 | INFO     | [payload] control thread has finished
[2026-01-24 20:03:26] 2026-01-24 19:02:24,757 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-24 20:03:26] 2026-01-24 19:02:24,859 | INFO     | [job] job monitor thread has finished
[2026-01-24 20:03:26] 2026-01-24 19:02:24,975 | INFO     | [job] control thread has finished
[2026-01-24 20:03:26] 2026-01-24 19:02:25,101 | INFO     | [job] validate thread has finished
[2026-01-24 20:03:26] 2026-01-24 19:02:25,173 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-24 20:03:26] 2026-01-24 19:02:25,266 | INFO     | [data] control thread has finished
[2026-01-24 20:03:26] 2026-01-24 19:02:25,544 | INFO     | [payload] execute_payloads thread has finished
[2026-01-24 20:03:26] 2026-01-24 19:02:25,689 | INFO     | [job] create_data_payload thread has finished
[2026-01-24 20:03:26] 2026-01-24 19:02:25,729 | INFO     | [data] copytool_out thread has finished
[2026-01-24 20:03:26] 2026-01-24 19:02:25,801 | INFO     | [payload] validate_pre thread has finished
[2026-01-24 20:03:26] 2026-01-24 19:02:25,880 | INFO     | [data] copytool_in thread has finished
[2026-01-24 20:03:26] 2026-01-24 19:02:29,179 | INFO     | [data] queue_monitor thread has finished
[2026-01-24 20:03:26] 2026-01-24 19:02:53,817 | INFO     | PID=29136 has CPU usage=4.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-24 20:03:26] 2026-01-24 19:02:53,817 | INFO     | .. there are 2 such processes running
[2026-01-24 20:03:26] 2026-01-24 19:02:53,817 | INFO     | found 0 job(s) in 20 queues
[2026-01-24 20:03:26] 2026-01-24 19:02:53,817 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-24 20:03:26] 2026-01-24 19:02:53,817 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-24 20:03:26] 2026-01-24 19:03:20,567 | INFO     | [monitor] cgroup control has ended
[2026-01-24 20:03:26] 2026-01-24 19:03:21,393 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140166690047808)>', '<ExcThread(monitor, started 140166089914112)>']
[2026-01-24 20:03:26] 2026-01-24 19:03:21,960 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-24 20:03:26] 2026-01-24 19:03:21,960 | INFO     | [monitor] control thread has ended
[2026-01-24 20:03:26] 2026-01-24 19:03:26,405 | INFO     | all workflow threads have been joined
[2026-01-24 20:03:26] 2026-01-24 19:03:26,406 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-24 20:03:26] 2026-01-24 19:03:26,406 | INFO     | traces error code: 0
[2026-01-24 20:03:26] 2026-01-24 19:03:26,406 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-24 20:03:26] 2026-01-24 19:03:26,536 [wrapper] ==== pilot stdout END ====
[2026-01-24 20:03:26] 2026-01-24 19:03:26,545 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-24 20:03:26] 2026-01-24 19:03:26,551 [wrapper] pilotpid: 29136
[2026-01-24 20:03:26] 2026-01-24 19:03:26,555 [wrapper] Pilot exit status: 0
[2026-01-24 20:03:26] 2026-01-24 19:03:26,575 [wrapper] pandaids: 6980226480
[2026-01-24 20:03:26] 2026-01-24 19:03:26,641 [wrapper] cleanup supervisor_pilot  7751 29137
[2026-01-24 20:03:26] 2026-01-24 19:03:26,648 [wrapper] Test setup, not cleaning
[2026-01-24 20:03:26] 2026-01-24 19:03:26,658 [wrapper] apfmon messages muted
[2026-01-24 20:03:26] 2026-01-24 19:03:26,664 [wrapper] ==== wrapper stdout END ====
[2026-01-24 20:03:26] 2026-01-24 19:03:26,669 [wrapper] ==== wrapper stderr END ====
[2026-01-24 20:03:26]  *** Error codes and diagnostics ***
[2026-01-24 20:03:26]     "exeErrorCode": 0,
[2026-01-24 20:03:26]     "exeErrorDiag": "",
[2026-01-24 20:03:26]     "pilotErrorCode": 0,
[2026-01-24 20:03:26]     "pilotErrorDiag": "",
[2026-01-24 20:03:26]  *** Listing of results directory ***
[2026-01-24 20:03:26] total 419724
[2026-01-24 20:03:26] -rw-r--r--. 1 boinc boinc    584422 Jan 24 02:50 pilot3.tar.gz
[2026-01-24 20:03:26] -rwx------. 1 boinc boinc     36322 Jan 24 02:51 runpilot2-wrapper.sh
[2026-01-24 20:03:26] -rw-r--r--. 1 boinc boinc      5111 Jan 24 02:53 queuedata.json
[2026-01-24 20:03:26] -rw-r--r--. 1 boinc boinc       100 Jan 24 14:39 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-24 20:03:26] -rwxr-xr-x. 1 boinc boinc      7986 Jan 24 14:39 run_atlas
[2026-01-24 20:03:26] -rw-r--r--. 1 boinc boinc       105 Jan 24 14:39 job.xml
[2026-01-24 20:03:26] -rw-r--r--. 1 boinc boinc      6391 Jan 24 14:39 init_data.xml
[2026-01-24 20:03:26] -rw-r--r--. 2 boinc boinc 249283033 Jan 24 14:39 EVNT.48314413._000001.pool.root.1
[2026-01-24 20:03:26] -rw-r--r--. 2 boinc boinc     15845 Jan 24 14:39 start_atlas.sh
[2026-01-24 20:03:26] drwxrwx--x. 2 boinc boinc        68 Jan 24 14:39 shared
[2026-01-24 20:03:26] -rw-r--r--. 2 boinc boinc    597757 Jan 24 14:39 input.tar.gz
[2026-01-24 20:03:26] -rw-r--r--. 1 boinc boinc         0 Jan 24 14:39 boinc_lockfile
[2026-01-24 20:03:26] -rw-r--r--. 1 boinc boinc      2600 Jan 24 14:39 pandaJob.out
[2026-01-24 20:03:26] -rw-------. 1 boinc boinc       415 Jan 24 14:45 workernode_map.json
[2026-01-24 20:03:26] -rw-------. 1 boinc boinc   1004246 Jan 24 14:45 agis_schedconf.cvmfs.json
[2026-01-24 20:03:26] drwx------. 5 boinc boinc      4096 Jan 24 14:45 pilot3
[2026-01-24 20:03:26] -rw-------. 1 boinc boinc 170246600 Jan 24 20:01 HITS.48314417._000003.pool.root.1
[2026-01-24 20:03:26] -rw-r--r--. 1 boinc boinc       531 Jan 24 20:01 boinc_task_state.xml
[2026-01-24 20:03:26] -rw-------. 1 boinc boinc        95 Jan 24 20:02 pilot_heartbeat.json
[2026-01-24 20:03:26] -rw-------. 1 boinc boinc      1009 Jan 24 20:02 memory_monitor_summary.json
[2026-01-24 20:03:26] -rw-------. 1 boinc boinc   1516246 Jan 24 20:02 agis_ddmendpoints.agis.ALL.json
[2026-01-24 20:03:26] -rw-------. 1 boinc boinc    514816 Jan 24 20:02 log.48314417._000003.job.log.tgz.1
[2026-01-24 20:03:26] -rw-------. 1 boinc boinc      6300 Jan 24 20:02 heartbeat.json
[2026-01-24 20:03:26] -rw-r--r--. 1 boinc boinc      8192 Jan 24 20:03 boinc_mmap_file
[2026-01-24 20:03:26] -rw-r--r--. 1 boinc boinc        28 Jan 24 20:03 wrapper_checkpoint.txt
[2026-01-24 20:03:26] -rw-------. 1 boinc boinc      5066 Jan 24 20:03 pilotlog.txt
[2026-01-24 20:03:26] -rw-------. 1 boinc boinc   2656933 Jan 24 20:03 log.48314417._000003.job.log.1
[2026-01-24 20:03:26] -rw-------. 1 boinc boinc       357 Jan 24 20:03 output.list
[2026-01-24 20:03:26] -rw-r--r--. 1 boinc boinc       620 Jan 24 20:03 runtime_log
[2026-01-24 20:03:26] -rw-------. 1 boinc boinc   3184640 Jan 24 20:03 result.tar.gz
[2026-01-24 20:03:26] -rw-------. 1 boinc boinc       655 Jan 24 20:03 uPeKDmPzh38n9Rq4apOajLDm4fhM0noT9bVo0NGKDmoRxKDmoT5VMm.diag
[2026-01-24 20:03:26] -rw-r--r--. 1 boinc boinc      8816 Jan 24 20:03 runtime_log.err
[2026-01-24 20:03:26] -rw-r--r--. 1 boinc boinc     20734 Jan 24 20:03 stderr.txt
[2026-01-24 20:03:26] HITS file was successfully produced:
[2026-01-24 20:03:26] -rw-------. 1 boinc boinc 170246600 Jan 24 20:01 shared/HITS.pool.root.1
[2026-01-24 20:03:26]  *** Contents of shared directory: ***
[2026-01-24 20:03:26] total 413416
[2026-01-24 20:03:26] -rw-r--r--. 2 boinc boinc 249283033 Jan 24 14:39 ATLAS.root_0
[2026-01-24 20:03:26] -rw-r--r--. 2 boinc boinc     15845 Jan 24 14:39 start_atlas.sh
[2026-01-24 20:03:26] -rw-r--r--. 2 boinc boinc    597757 Jan 24 14:39 input.tar.gz
[2026-01-24 20:03:26] -rw-------. 1 boinc boinc 170246600 Jan 24 20:01 HITS.pool.root.1
[2026-01-24 20:03:26] -rw-------. 1 boinc boinc   3184640 Jan 24 20:03 result.tar.gz
20:03:28 (25138): run_atlas exited; CPU time 72848.631947
20:03:28 (25138): called boinc_finish(0)

</stderr_txt>
]]>

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