Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:14:08 (959): wrapper (7.7.26015): starting
13:14:08 (959): wrapper: running run_atlas (--nthreads 8)
[2026-01-24 13:14:08] Arguments: --nthreads 8
[2026-01-24 13:14:08] Threads: 8
[2026-01-24 13:14:08] Checking for CVMFS
[2026-01-24 13:14:10] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-24 13:14:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-24 13:14:10] Running cvmfs_config stat atlas.cern.ch
[2026-01-24 13:14:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-24 13:14:12] 2.11.2.0 23802 57002 130888 155472 1 53 20897794 25165825 1060 130560 0 19844165 99.804 15117863 3228 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-24 13:14:12] CVMFS is ok
[2026-01-24 13:14:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-24 13:14:12] Checking for apptainer binary...
[2026-01-24 13:14:12] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-24 13:14:12] Running /usr/bin/apptainer --version
[2026-01-24 13:14:12] apptainer version 1.3.2-1.el7
[2026-01-24 13:14:12] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-24 13:14:30] cg-vwn426.simple-grid.lan
[2026-01-24 13:14:30] apptainer works
[2026-01-24 13:14:30] Set ATHENA_PROC_NUMBER=8
[2026-01-24 13:14:30] Set ATHENA_CORE_NUMBER=8
[2026-01-24 13:14:30] Starting ATLAS job with PandaID=6980224068
[2026-01-24 13:14:30] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-24 18:05:51]  *** The last 200 lines of the pilot log: ***
[2026-01-24 18:05:51] 2026-01-24 17:05:12,713 | INFO     | total number of processed events: 400 (read)
[2026-01-24 18:05:51] 2026-01-24 17:05:12,715 | INFO     | using path: /var/lib/boinc/slots/2/PanDA_Pilot-6980224068/memory_monitor_summary.json (trf name=prmon)
[2026-01-24 18:05:51] 2026-01-24 17:05:12,716 | INFO     | extracted standard info from prmon json
[2026-01-24 18:05:51] 2026-01-24 17:05:12,716 | INFO     | extracted standard memory fields from prmon json
[2026-01-24 18:05:51] 2026-01-24 17:05:12,716 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-24 18:05:51] 2026-01-24 17:05:12,716 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-24 18:05:51] 2026-01-24 17:05:12,717 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-24 18:05:51] 2026-01-24 17:05:12,722 | INFO     | fitting pss+swap vs Time
[2026-01-24 18:05:51] 2026-01-24 17:05:12,723 | INFO     | sum of square deviations: 6519285025.0
[2026-01-24 18:05:51] 2026-01-24 17:05:12,726 | INFO     | sum of deviations: 94835073221.50006
[2026-01-24 18:05:51] 2026-01-24 17:05:12,726 | INFO     | mean x: 1769265891.5
[2026-01-24 18:05:51] 2026-01-24 17:05:12,726 | INFO     | mean y: 2469061.757246377
[2026-01-24 18:05:51] 2026-01-24 17:05:12,726 | INFO     | intersect: -25734779689.489838
[2026-01-24 18:05:51] 2026-01-24 17:05:12,726 | INFO     | chi2: 8.384849344725978
[2026-01-24 18:05:51] 2026-01-24 17:05:12,727 | INFO     | sum of square deviations: 6171352920.0
[2026-01-24 18:05:51] 2026-01-24 17:05:12,734 | INFO     | sum of deviations: 111446788085.99986
[2026-01-24 18:05:51] 2026-01-24 17:05:12,734 | INFO     | mean x: 1769265739.0
[2026-01-24 18:05:51] 2026-01-24 17:05:12,734 | INFO     | mean y: 2476224.5313653136
[2026-01-24 18:05:51] 2026-01-24 17:05:12,734 | INFO     | intersect: -31948213751.91434
[2026-01-24 18:05:51] 2026-01-24 17:05:12,735 | INFO     | chi2: 7.680593836695641
[2026-01-24 18:05:51] 2026-01-24 17:05:12,735 | INFO     | current chi2=7.680593836695641 (change=8.399143253221482 %)
[2026-01-24 18:05:51] 2026-01-24 17:05:12,735 | INFO     | right removable region: 270
[2026-01-24 18:05:51] 2026-01-24 17:05:12,736 | INFO     | sum of square deviations: 6171352920.0
[2026-01-24 18:05:51] 2026-01-24 17:05:12,738 | INFO     | sum of deviations: -3406708784.999983
[2026-01-24 18:05:51] 2026-01-24 17:05:12,738 | INFO     | mean x: 1769266044.0
[2026-01-24 18:05:51] 2026-01-24 17:05:12,739 | INFO     | mean y: 2512099.8745387453
[2026-01-24 18:05:51] 2026-01-24 17:05:12,739 | INFO     | intersect: 979181924.6650753
[2026-01-24 18:05:51] 2026-01-24 17:05:12,739 | INFO     | chi2: 3.319387714063008
[2026-01-24 18:05:51] 2026-01-24 17:05:12,739 | INFO     | current chi2=3.319387714063008 (change=60.41207685918788 %)
[2026-01-24 18:05:51] 2026-01-24 17:05:12,740 | INFO     | sum of square deviations: 5836025702.5
[2026-01-24 18:05:51] 2026-01-24 17:05:12,742 | INFO     | sum of deviations: -67729420814.0
[2026-01-24 18:05:51] 2026-01-24 17:05:12,742 | INFO     | mean x: 1769266196.5
[2026-01-24 18:05:51] 2026-01-24 17:05:12,742 | INFO     | mean y: 2541268.4360902254
[2026-01-24 18:05:51] 2026-01-24 17:05:12,742 | INFO     | intersect: 20535585648.86113
[2026-01-24 18:05:51] 2026-01-24 17:05:12,743 | INFO     | chi2: 1.08984755656327
[2026-01-24 18:05:51] 2026-01-24 17:05:12,743 | INFO     | current chi2=1.08984755656327 (change=67.16721123157767 %)
[2026-01-24 18:05:51] 2026-01-24 17:05:12,744 | INFO     | sum of square deviations: 5513070810.0
[2026-01-24 18:05:51] 2026-01-24 17:05:12,746 | INFO     | sum of deviations: -74922580342.0
[2026-01-24 18:05:51] 2026-01-24 17:05:12,746 | INFO     | mean x: 1769266349.0
[2026-01-24 18:05:51] 2026-01-24 17:05:12,746 | INFO     | mean y: 2544622.5440613027
[2026-01-24 18:05:51] 2026-01-24 17:05:12,746 | INFO     | intersect: 24046857628.447483
[2026-01-24 18:05:51] 2026-01-24 17:05:12,747 | INFO     | chi2: 1.0051897324121464
[2026-01-24 18:05:51] 2026-01-24 17:05:12,747 | INFO     | current chi2=1.0051897324121464 (change=7.7678592424507436 %)
[2026-01-24 18:05:51] 2026-01-24 17:05:12,747 | INFO     | left removable region: 30
[2026-01-24 18:05:51] 2026-01-24 17:05:12,747 | INFO     | sum of square deviations: 4286517580.0
[2026-01-24 18:05:51] 2026-01-24 17:05:12,749 | INFO     | sum of deviations: -32389867047.0
[2026-01-24 18:05:51] 2026-01-24 17:05:12,749 | INFO     | mean x: 1769266623.5
[2026-01-24 18:05:51] 2026-01-24 17:05:12,750 | INFO     | mean y: 2541139.75
[2026-01-24 18:05:51] 2026-01-24 17:05:12,750 | INFO     | intersect: 13371507821.057674
[2026-01-24 18:05:51] 2026-01-24 17:05:12,750 | INFO     | chi2: 0.1716638519367539
[2026-01-24 18:05:51] 2026-01-24 17:05:12,750 | INFO     | current memory leak: -7.56 B/s (using 240 data points, chi2=0.17)
[2026-01-24 18:05:51] 2026-01-24 17:05:12,751 | INFO     | could have reported an average CPU frequency of 1999 MHz (13 samples)
[2026-01-24 18:05:51] 2026-01-24 17:05:12,751 | INFO     | ..............................
[2026-01-24 18:05:51] 2026-01-24 17:05:12,751 | INFO     | . Timing measurements:
[2026-01-24 18:05:51] 2026-01-24 17:05:12,751 | INFO     | . get job = 0 s
[2026-01-24 18:05:51] 2026-01-24 17:05:12,752 | INFO     | . initial setup = 131 s
[2026-01-24 18:05:51] 2026-01-24 17:05:12,752 | INFO     | . payload setup = 117 s
[2026-01-24 18:05:51] 2026-01-24 17:05:12,752 | INFO     | . stage-in = 0 s
[2026-01-24 18:05:51] 2026-01-24 17:05:12,752 | INFO     | . payload execution = 16922 s
[2026-01-24 18:05:51] 2026-01-24 17:05:12,752 | INFO     | . stage-out = 5 s
[2026-01-24 18:05:51] 2026-01-24 17:05:12,752 | INFO     | . log creation = 0 s
[2026-01-24 18:05:51] 2026-01-24 17:05:12,752 | INFO     | ..............................
[2026-01-24 18:05:51] 2026-01-24 17:05:12,899 | INFO     | 
[2026-01-24 18:05:51] 2026-01-24 17:05:12,900 | INFO     | job summary report
[2026-01-24 18:05:51] 2026-01-24 17:05:12,900 | INFO     | --------------------------------------------------
[2026-01-24 18:05:51] 2026-01-24 17:05:12,900 | INFO     | PanDA job id: 6980224068
[2026-01-24 18:05:51] 2026-01-24 17:05:12,900 | INFO     | task id: 48314251
[2026-01-24 18:05:51] 2026-01-24 17:05:12,900 | INFO     | errors: (none)
[2026-01-24 18:05:51] 2026-01-24 17:05:12,900 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-24 18:05:51] 2026-01-24 17:05:12,900 | INFO     | pilot state: finished 
[2026-01-24 18:05:51] 2026-01-24 17:05:12,900 | INFO     | transexitcode: 0
[2026-01-24 18:05:51] 2026-01-24 17:05:12,900 | INFO     | exeerrorcode: 0
[2026-01-24 18:05:51] 2026-01-24 17:05:12,900 | INFO     | exeerrordiag: 
[2026-01-24 18:05:51] 2026-01-24 17:05:12,901 | INFO     | exitcode: 0
[2026-01-24 18:05:51] 2026-01-24 17:05:12,901 | INFO     | exitmsg: OK
[2026-01-24 18:05:51] 2026-01-24 17:05:12,901 | INFO     | cpuconsumptiontime: 64210 s
[2026-01-24 18:05:51] 2026-01-24 17:05:12,901 | INFO     | nevents: 400
[2026-01-24 18:05:51] 2026-01-24 17:05:12,901 | INFO     | neventsw: 0
[2026-01-24 18:05:51] 2026-01-24 17:05:12,901 | INFO     | pid: 9379
[2026-01-24 18:05:51] 2026-01-24 17:05:12,901 | INFO     | pgrp: 9379
[2026-01-24 18:05:51] 2026-01-24 17:05:12,901 | INFO     | corecount: 8
[2026-01-24 18:05:51] 2026-01-24 17:05:12,901 | INFO     | event service: False
[2026-01-24 18:05:51] 2026-01-24 17:05:12,901 | INFO     | sizes: {0: 2283287, 1: 2283972, 2: 2284433, 17044: 2316302, 17045: 2316301, 17051: 2325355, 17053: 2325539, 17055: 2325733}
[2026-01-24 18:05:51] 2026-01-24 17:05:12,902 | INFO     | --------------------------------------------------
[2026-01-24 18:05:51] 2026-01-24 17:05:12,902 | INFO     | 
[2026-01-24 18:05:51] 2026-01-24 17:05:12,902 | INFO     | executing command: ls -lF /var/lib/boinc/slots/2
[2026-01-24 18:05:51] 2026-01-24 17:05:13,247 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-24 18:05:51] 2026-01-24 17:05:13,248 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-24 18:05:51] 2026-01-24 17:05:13,248 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-24 18:05:51] 2026-01-24 17:05:13,248 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-24 18:05:51] 2026-01-24 17:05:13,248 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-24 18:05:51] 2026-01-24 17:05:13,248 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-24 18:05:51] 2026-01-24 17:05:13,248 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-24 18:05:51] 2026-01-24 17:05:13,249 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-24 18:05:51] 2026-01-24 17:05:13,249 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-24 18:05:51] 2026-01-24 17:05:13,249 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-24 18:05:51] 2026-01-24 17:05:13,249 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-24 18:05:51] 2026-01-24 17:05:13,249 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-24 18:05:51] 2026-01-24 17:05:13,249 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-24 18:05:51] 2026-01-24 17:05:13,249 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-24 18:05:51] 2026-01-24 17:05:13,249 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-24 18:05:51] 2026-01-24 17:05:13,250 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-24 18:05:51] 2026-01-24 17:05:13,250 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-24 18:05:51] 2026-01-24 17:05:13,250 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-24 18:05:51] 2026-01-24 17:05:13,250 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-24 18:05:51] 2026-01-24 17:05:13,250 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-24 18:05:51] 2026-01-24 17:05:13,250 | INFO     | job 6980224068 has completed (purged errors)
[2026-01-24 18:05:51] 2026-01-24 17:05:13,251 | INFO     | overall cleanup function is called
[2026-01-24 18:05:51] 2026-01-24 17:05:14,259 | INFO     | --- collectZombieJob: --- 10, [9379]
[2026-01-24 18:05:51] 2026-01-24 17:05:14,260 | INFO     | zombie collector waiting for pid 9379
[2026-01-24 18:05:51] 2026-01-24 17:05:14,260 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-24 18:05:51] 2026-01-24 17:05:14,260 | INFO     | collected zombie processes
[2026-01-24 18:05:51] 2026-01-24 17:05:14,260 | INFO     | will attempt to kill all subprocesses of pid=9379
[2026-01-24 18:05:51] 2026-01-24 17:05:14,346 | INFO     | process IDs to be killed: [9379] (in reverse order)
[2026-01-24 18:05:51] 2026-01-24 17:05:15,563 | WARNING  | found no corresponding commands to process id(s)
[2026-01-24 18:05:51] 2026-01-24 17:05:15,564 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-24 18:05:51] 2026-01-24 17:05:15,566 | INFO     | did not find any defunct processes belonging to 9379
[2026-01-24 18:05:51] 2026-01-24 17:05:15,568 | INFO     | did not find any defunct processes belonging to 9379
[2026-01-24 18:05:51] 2026-01-24 17:05:15,568 | INFO     | ready for new job
[2026-01-24 18:05:51] 2026-01-24 17:05:15,568 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-24 18:05:51] 2026-01-24 17:05:15,570 | INFO     | **************************************
[2026-01-24 18:05:51] 2026-01-24 17:05:15,571 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-24 18:05:51] 2026-01-24 17:05:15,571 | INFO     | **************************************
[2026-01-24 18:05:51] 2026-01-24 17:05:15,571 | INFO     | 
[2026-01-24 18:05:51] 2026-01-24 17:05:15,572 | INFO     | pilot is running in a VM
[2026-01-24 18:05:51] 2026-01-24 17:05:15,572 | INFO     | architecture information:
[2026-01-24 18:05:51] 2026-01-24 17:05:15,577 | INFO     | executing command: cat /etc/os-release
[2026-01-24 18:05:51] 2026-01-24 17:05:15,841 | INFO     | cat /etc/os-release:
[2026-01-24 18:05:51] NAME="CentOS Linux"
[2026-01-24 18:05:51] VERSION="7 (Core)"
[2026-01-24 18:05:51] ID="centos"
[2026-01-24 18:05:51] ID_LIKE="rhel fedora"
[2026-01-24 18:05:51] VERSION_ID="7"
[2026-01-24 18:05:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-24 18:05:51] ANSI_COLOR="0;31"
[2026-01-24 18:05:51] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-24 18:05:51] HOME_URL="https://www.centos.org/"
[2026-01-24 18:05:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-24 18:05:51] 
[2026-01-24 18:05:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-24 18:05:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-24 18:05:51] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-24 18:05:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-24 18:05:51] 
[2026-01-24 18:05:51] 2026-01-24 17:05:15,841 | INFO     | **************************************
[2026-01-24 18:05:51] 2026-01-24 17:05:16,345 | INFO     | executing command: df -mP /var/lib/boinc/slots/2
[2026-01-24 18:05:51] 2026-01-24 17:05:16,528 | INFO     | sufficient remaining disk space (495629369344 B)
[2026-01-24 18:05:51] 2026-01-24 17:05:16,528 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-24 18:05:51] 2026-01-24 17:05:16,529 | INFO     | current server update state: UPDATING_FINAL
[2026-01-24 18:05:51] 2026-01-24 17:05:16,529 | INFO     | update_server=False
[2026-01-24 18:05:51] 2026-01-24 17:05:16,529 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-24 18:05:51] 2026-01-24 17:05:16,685 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-24 18:05:51] 2026-01-24 17:05:16,732 | INFO     | all data control threads have been joined
[2026-01-24 18:05:51] 2026-01-24 17:05:17,141 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-24 18:05:51] 2026-01-24 17:05:17,142 | INFO     | aborting loop
[2026-01-24 18:05:51] 2026-01-24 17:05:17,165 | INFO     | all job control threads have been joined
[2026-01-24 18:05:51] 2026-01-24 17:05:17,183 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-24 18:05:51] 2026-01-24 17:05:17,474 | INFO     | all payload control threads have been joined
[2026-01-24 18:05:51] 2026-01-24 17:05:17,535 | INFO     | [job] retrieve thread has finished
[2026-01-24 18:05:51] 2026-01-24 17:05:17,739 | INFO     | [data] control thread has finished
[2026-01-24 18:05:51] 2026-01-24 17:05:17,914 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-24 18:05:51] 2026-01-24 17:05:18,087 | INFO     | [job] validate thread has finished
[2026-01-24 18:05:51] 2026-01-24 17:05:18,095 | INFO     | [data] copytool_in thread has finished
[2026-01-24 18:05:51] 2026-01-24 17:05:18,148 | INFO     | [job] job monitor thread has finished
[2026-01-24 18:05:51] 2026-01-24 17:05:18,172 | INFO     | [job] control thread has finished
[2026-01-24 18:05:51] 2026-01-24 17:05:18,198 | INFO     | [job] create_data_payload thread has finished
[2026-01-24 18:05:51] 2026-01-24 17:05:18,307 | INFO     | [payload] validate_post thread has finished
[2026-01-24 18:05:51] 2026-01-24 17:05:18,463 | INFO     | [payload] validate_pre thread has finished
[2026-01-24 18:05:51] 2026-01-24 17:05:18,481 | INFO     | [payload] control thread has finished
[2026-01-24 18:05:51] 2026-01-24 17:05:18,691 | INFO     | [data] copytool_out thread has finished
[2026-01-24 18:05:51] 2026-01-24 17:05:18,704 | INFO     | [payload] failed_post thread has finished
[2026-01-24 18:05:51] 2026-01-24 17:05:18,706 | INFO     | [payload] execute_payloads thread has finished
[2026-01-24 18:05:51] 2026-01-24 17:05:18,920 | INFO     | [job] queue monitor thread has finished
[2026-01-24 18:05:51] 2026-01-24 17:05:21,192 | INFO     | [data] queue_monitor thread has finished
[2026-01-24 18:05:51] 2026-01-24 17:05:24,331 | INFO     | [monitor] cgroup control has ended
[2026-01-24 18:05:51] 2026-01-24 17:05:26,917 | INFO     | job.realtimelogging is not enabled
[2026-01-24 18:05:51] 2026-01-24 17:05:27,924 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-24 18:05:51] 2026-01-24 17:05:28,102 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139947404453696)>', '<ExcThread(monitor, started 139946744608512)>']
[2026-01-24 18:05:51] 2026-01-24 17:05:33,127 | INFO     | all workflow threads have been joined
[2026-01-24 18:05:51] 2026-01-24 17:05:33,128 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-24 18:05:51] 2026-01-24 17:05:33,128 | INFO     | traces error code: 0
[2026-01-24 18:05:51] 2026-01-24 17:05:33,128 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-24 18:05:51] 2026-01-24 17:05:44,745 | INFO     | PID=4946 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-24 18:05:51] 2026-01-24 17:05:44,746 | INFO     | .. there are 2 such processes running
[2026-01-24 18:05:51] 2026-01-24 17:05:44,746 | INFO     | found 0 job(s) in 20 queues
[2026-01-24 18:05:51] 2026-01-24 17:05:44,746 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-24 18:05:51] 2026-01-24 17:05:44,746 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-24 18:05:51] 2026-01-24 17:05:44,746 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-24 18:05:51] 2026-01-24 17:05:44,746 | CRITICAL | thread 'MainThread' is not alive
[2026-01-24 18:05:51] 2026-01-24 17:05:44,746 | INFO     | [monitor] control thread has ended
[2026-01-24 18:05:51] 2026-01-24 17:05:45,268 [wrapper] ==== pilot stdout END ====
[2026-01-24 18:05:51] 2026-01-24 17:05:45,357 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-24 18:05:51] 2026-01-24 17:05:45,448 [wrapper] pilotpid: 4946
[2026-01-24 18:05:51] 2026-01-24 17:05:45,489 [wrapper] Pilot exit status: 0
[2026-01-24 18:05:51] 2026-01-24 17:05:46,069 [wrapper] pandaids: 6980224068
[2026-01-24 18:05:51] 2026-01-24 17:05:47,191 [wrapper] cleanup supervisor_pilot 15462 4947
[2026-01-24 18:05:51] 2026-01-24 17:05:47,281 [wrapper] Test setup, not cleaning
[2026-01-24 18:05:51] 2026-01-24 17:05:47,396 [wrapper] apfmon messages muted
[2026-01-24 18:05:51] 2026-01-24 17:05:47,486 [wrapper] ==== wrapper stdout END ====
[2026-01-24 18:05:51] 2026-01-24 17:05:47,601 [wrapper] ==== wrapper stderr END ====
[2026-01-24 18:05:51]  *** Error codes and diagnostics ***
[2026-01-24 18:05:51]     "exeErrorCode": 0,
[2026-01-24 18:05:51]     "exeErrorDiag": "",
[2026-01-24 18:05:51]     "pilotErrorCode": 0,
[2026-01-24 18:05:51]     "pilotErrorDiag": "",
[2026-01-24 18:05:51]  *** Listing of results directory ***
[2026-01-24 18:05:51] total 422144
[2026-01-24 18:05:51] -rw-r--r--. 1 boinc boinc    584422 Jan 24 02:50 pilot3.tar.gz
[2026-01-24 18:05:51] -rw-r--r--. 1 boinc boinc      5111 Jan 24 02:50 queuedata.json
[2026-01-24 18:05:51] -rwx------. 1 boinc boinc     36322 Jan 24 02:51 runpilot2-wrapper.sh
[2026-01-24 18:05:51] -rw-r--r--. 1 boinc boinc       100 Jan 24 13:14 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-24 18:05:51] -rwxr-xr-x. 1 boinc boinc      7986 Jan 24 13:14 run_atlas
[2026-01-24 18:05:51] -rw-r--r--. 1 boinc boinc       105 Jan 24 13:14 job.xml
[2026-01-24 18:05:51] -rw-r--r--. 1 boinc boinc      6390 Jan 24 13:14 init_data.xml
[2026-01-24 18:05:51] -rw-r--r--. 2 boinc boinc 253576850 Jan 24 13:14 EVNT.48314249._000001.pool.root.1
[2026-01-24 18:05:51] -rw-r--r--. 2 boinc boinc     15845 Jan 24 13:14 start_atlas.sh
[2026-01-24 18:05:51] drwxrwx--x. 2 boinc boinc        68 Jan 24 13:14 shared
[2026-01-24 18:05:51] -rw-r--r--. 2 boinc boinc    597769 Jan 24 13:14 input.tar.gz
[2026-01-24 18:05:51] -rw-r--r--. 1 boinc boinc         0 Jan 24 13:14 boinc_lockfile
[2026-01-24 18:05:51] -rw-r--r--. 1 boinc boinc      2626 Jan 24 13:14 pandaJob.out
[2026-01-24 18:05:51] -rw-------. 1 boinc boinc       415 Jan 24 13:20 workernode_map.json
[2026-01-24 18:05:51] -rw-------. 1 boinc boinc   1004246 Jan 24 13:20 agis_schedconf.cvmfs.json
[2026-01-24 18:05:51] drwx------. 5 boinc boinc      4096 Jan 24 13:20 pilot3
[2026-01-24 18:05:51] -rw-------. 1 boinc boinc 168972473 Jan 24 18:03 HITS.48314251._000024.pool.root.1
[2026-01-24 18:05:51] -rw-r--r--. 1 boinc boinc       531 Jan 24 18:03 boinc_task_state.xml
[2026-01-24 18:05:51] -rw-------. 1 boinc boinc        95 Jan 24 18:04 pilot_heartbeat.json
[2026-01-24 18:05:51] -rw-------. 1 boinc boinc      1016 Jan 24 18:04 memory_monitor_summary.json
[2026-01-24 18:05:51] -rw-------. 1 boinc boinc   1516246 Jan 24 18:05 agis_ddmendpoints.agis.ALL.json
[2026-01-24 18:05:51] -rw-------. 1 boinc boinc    513939 Jan 24 18:05 log.48314251._000024.job.log.tgz.1
[2026-01-24 18:05:51] -rw-------. 1 boinc boinc      6311 Jan 24 18:05 heartbeat.json
[2026-01-24 18:05:51] -rw-r--r--. 1 boinc boinc      8192 Jan 24 18:05 boinc_mmap_file
[2026-01-24 18:05:51] -rw-r--r--. 1 boinc boinc        28 Jan 24 18:05 wrapper_checkpoint.txt
[2026-01-24 18:05:51] -rw-------. 1 boinc boinc       889 Jan 24 18:05 pilotlog.txt
[2026-01-24 18:05:51] -rw-------. 1 boinc boinc   2385981 Jan 24 18:05 log.48314251._000024.job.log.1
[2026-01-24 18:05:51] -rw-------. 1 boinc boinc       357 Jan 24 18:05 output.list
[2026-01-24 18:05:51] -rw-r--r--. 1 boinc boinc       620 Jan 24 18:05 runtime_log
[2026-01-24 18:05:51] -rw-------. 1 boinc boinc   2918400 Jan 24 18:05 result.tar.gz
[2026-01-24 18:05:51] -rw-r--r--. 1 boinc boinc      8816 Jan 24 18:05 runtime_log.err
[2026-01-24 18:05:51] -rw-------. 1 boinc boinc       656 Jan 24 18:05 CXILDmtyh38nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmW13KDmjmaOZm.diag
[2026-01-24 18:05:51] -rw-r--r--. 1 boinc boinc     20652 Jan 24 18:05 stderr.txt
[2026-01-24 18:05:51] HITS file was successfully produced:
[2026-01-24 18:05:51] -rw-------. 1 boinc boinc 168972473 Jan 24 18:03 shared/HITS.pool.root.1
[2026-01-24 18:05:51]  *** Contents of shared directory: ***
[2026-01-24 18:05:51] total 416104
[2026-01-24 18:05:51] -rw-r--r--. 2 boinc boinc 253576850 Jan 24 13:14 ATLAS.root_0
[2026-01-24 18:05:51] -rw-r--r--. 2 boinc boinc     15845 Jan 24 13:14 start_atlas.sh
[2026-01-24 18:05:51] -rw-r--r--. 2 boinc boinc    597769 Jan 24 13:14 input.tar.gz
[2026-01-24 18:05:51] -rw-------. 1 boinc boinc 168972473 Jan 24 18:03 HITS.pool.root.1
[2026-01-24 18:05:51] -rw-------. 1 boinc boinc   2918400 Jan 24 18:05 result.tar.gz
18:05:52 (959): run_atlas exited; CPU time 64397.853699
18:05:52 (959): called boinc_finish(0)

</stderr_txt>
]]>

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