Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:05:23 (1250092): wrapper (7.7.26015): starting
00:05:23 (1250092): wrapper: running run_atlas (--nthreads 8)
[2026-01-24 00:05:23] Arguments: --nthreads 8
[2026-01-24 00:05:23] Threads: 8
[2026-01-24 00:05:23] Checking for CVMFS
[2026-01-24 00:05:24] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-24 00:05:25] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-24 00:05:25] Running cvmfs_config stat atlas.cern.ch
[2026-01-24 00:05:28] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-24 00:05:28] 2.13.3.0 9330 114521 334236 155460 0 303 30111869 32935936 24572 16776704 0 530675478 99.699 404586652 32808 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-24 00:05:28] CVMFS is ok
[2026-01-24 00:05:28] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-24 00:05:28] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-24 00:05:28] Further information can be found at the LHC@home message board.
[2026-01-24 00:05:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-24 00:05:28] Checking for apptainer binary...
[2026-01-24 00:05:28] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-24 00:05:28] Running /usr/bin/apptainer --version
[2026-01-24 00:05:29] apptainer version 1.4.5-2.el9
[2026-01-24 00:05:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-24 00:05:30] c-5-5.aglt2.org
[2026-01-24 00:05:30] apptainer works
[2026-01-24 00:05:30] Set ATHENA_PROC_NUMBER=8
[2026-01-24 00:05:30] Set ATHENA_CORE_NUMBER=8
[2026-01-24 00:05:31] Starting ATLAS job with PandaID=6979649282
[2026-01-24 00:05:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-25 16:43:03]  *** The last 200 lines of the pilot log: ***
[2026-01-25 16:43:03] 2026-01-25 21:42:08,808 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6979649282/memory_monitor_summary.json (trf name=prmon)
[2026-01-25 16:43:03] 2026-01-25 21:42:08,809 | INFO     | extracted standard info from prmon json
[2026-01-25 16:43:03] 2026-01-25 21:42:08,809 | INFO     | extracted standard memory fields from prmon json
[2026-01-25 16:43:03] 2026-01-25 21:42:08,809 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-25 16:43:03] 2026-01-25 21:42:08,813 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-25 16:43:03] 2026-01-25 21:42:08,813 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-25 16:43:03] 2026-01-25 21:42:08,859 | INFO     | fitting pss+swap vs Time
[2026-01-25 16:43:03] 2026-01-25 21:42:08,862 | INFO     | sum of square deviations: 4254443732554.7847
[2026-01-25 16:43:03] 2026-01-25 21:42:09,093 | INFO     | sum of deviations: 4729941634173.569
[2026-01-25 16:43:03] 2026-01-25 21:42:09,094 | INFO     | mean x: 1769304290.1177945
[2026-01-25 16:43:03] 2026-01-25 21:42:09,094 | INFO     | mean y: 2479631.590225564
[2026-01-25 16:43:03] 2026-01-25 21:42:09,094 | INFO     | intersect: -1964570951.618376
[2026-01-25 16:43:03] 2026-01-25 21:42:09,097 | INFO     | chi2: 10.130739012190485
[2026-01-25 16:43:03] 2026-01-25 21:42:09,100 | INFO     | sum of square deviations: 4227842410455.377
[2026-01-25 16:43:03] 2026-01-25 21:42:09,301 | INFO     | sum of deviations: 5489109456314.9375
[2026-01-25 16:43:03] 2026-01-25 21:42:09,301 | INFO     | mean x: 1769304137.6190875
[2026-01-25 16:43:03] 2026-01-25 21:42:09,301 | INFO     | mean y: 2483983.791125994
[2026-01-25 16:43:03] 2026-01-25 21:42:09,301 | INFO     | intersect: -2294646119.4702253
[2026-01-25 16:43:03] 2026-01-25 21:42:09,304 | INFO     | chi2: 6.569746305784345
[2026-01-25 16:43:03] 2026-01-25 21:42:09,304 | INFO     | current chi2=6.569746305784345 (change=35.15037453951918 %)
[2026-01-25 16:43:03] 2026-01-25 21:42:09,308 | INFO     | sum of square deviations: 4201352206718.4507
[2026-01-25 16:43:03] 2026-01-25 21:42:09,544 | INFO     | sum of deviations: 5468922018961.512
[2026-01-25 16:43:03] 2026-01-25 21:42:09,553 | INFO     | mean x: 1769303985.120386
[2026-01-25 16:43:03] 2026-01-25 21:42:09,554 | INFO     | mean y: 2483867.625419463
[2026-01-25 16:43:03] 2026-01-25 21:42:09,555 | INFO     | intersect: -2300628332.058264
[2026-01-25 16:43:03] 2026-01-25 21:42:09,558 | INFO     | chi2: 6.56852410666997
[2026-01-25 16:43:03] 2026-01-25 21:42:09,559 | INFO     | current chi2=6.56852410666997 (change=0.01860344460027257 %)
[2026-01-25 16:43:03] 2026-01-25 21:42:09,559 | INFO     | right removable region: 2383
[2026-01-25 16:43:03] 2026-01-25 21:42:09,562 | INFO     | sum of square deviations: 4227841800455.8413
[2026-01-25 16:43:03] 2026-01-25 21:42:09,815 | INFO     | sum of deviations: 4100813825159.4175
[2026-01-25 16:43:03] 2026-01-25 21:42:09,816 | INFO     | mean x: 1769304442.6182504
[2026-01-25 16:43:03] 2026-01-25 21:42:09,816 | INFO     | mean y: 2483237.141900377
[2026-01-25 16:43:03] 2026-01-25 21:42:09,816 | INFO     | intersect: -1713661420.499407
[2026-01-25 16:43:03] 2026-01-25 21:42:09,819 | INFO     | chi2: 7.584910563342548
[2026-01-25 16:43:03] 2026-01-25 21:42:09,819 | INFO     | current chi2=7.584910563342548 (change=25.129740740379347 %)
[2026-01-25 16:43:03] 2026-01-25 21:42:09,822 | INFO     | sum of square deviations: 4201350840868.166
[2026-01-25 16:43:03] 2026-01-25 21:42:10,046 | INFO     | sum of deviations: 3703517371785.2183
[2026-01-25 16:43:03] 2026-01-25 21:42:10,046 | INFO     | mean x: 1769304595.1191275
[2026-01-25 16:43:03] 2026-01-25 21:42:10,047 | INFO     | mean y: 2485523.837248322
[2026-01-25 16:43:03] 2026-01-25 21:42:10,047 | INFO     | intersect: -1557167681.094588
[2026-01-25 16:43:03] 2026-01-25 21:42:10,050 | INFO     | chi2: 6.650328715350175
[2026-01-25 16:43:03] 2026-01-25 21:42:10,050 | INFO     | current chi2=6.650328715350175 (change=12.321593513694888 %)
[2026-01-25 16:43:03] 2026-01-25 21:42:10,050 | INFO     | left removable region: 20
[2026-01-25 16:43:03] 2026-01-25 21:42:10,053 | INFO     | sum of square deviations: 4091298635627.0293
[2026-01-25 16:43:03] 2026-01-25 21:42:10,086 | INFO     | monitor loop #7438: job 0:6979649282 is in state 'finished'
[2026-01-25 16:43:03] 2026-01-25 21:42:10,086 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-25 16:43:03] 2026-01-25 21:42:10,553 | INFO     | sum of deviations: 3852483095666.912
[2026-01-25 16:43:03] 2026-01-25 21:42:10,553 | INFO     | mean x: 1769304564.622937
[2026-01-25 16:43:03] 2026-01-25 21:42:10,553 | INFO     | mean y: 2493229.444350402
[2026-01-25 16:43:03] 2026-01-25 21:42:10,553 | INFO     | intersect: -1663534243.334234
[2026-01-25 16:43:03] 2026-01-25 21:42:10,557 | INFO     | chi2: 2.1138909575381732
[2026-01-25 16:43:03] 2026-01-25 21:42:10,557 | INFO     | current memory leak: 0.94 B/s (using 2363 data points, chi2=2.11)
[2026-01-25 16:43:03] 2026-01-25 21:42:10,559 | INFO     | could have reported an average CPU frequency of 2600 MHz (84 samples)
[2026-01-25 16:43:03] 2026-01-25 21:42:10,559 | INFO     | ..............................
[2026-01-25 16:43:03] 2026-01-25 21:42:10,559 | INFO     | . Timing measurements:
[2026-01-25 16:43:03] 2026-01-25 21:42:10,559 | INFO     | . get job = 0 s
[2026-01-25 16:43:03] 2026-01-25 21:42:10,559 | INFO     | . initial setup = 36 s
[2026-01-25 16:43:03] 2026-01-25 21:42:10,559 | INFO     | . payload setup = 38 s
[2026-01-25 16:43:03] 2026-01-25 21:42:10,560 | INFO     | . stage-in = 0 s
[2026-01-25 16:43:03] 2026-01-25 21:42:10,560 | INFO     | . payload execution = 146049 s
[2026-01-25 16:43:03] 2026-01-25 21:42:10,560 | INFO     | . stage-out = 4 s
[2026-01-25 16:43:03] 2026-01-25 21:42:10,560 | INFO     | . log creation = 1 s
[2026-01-25 16:43:03] 2026-01-25 21:42:10,560 | INFO     | ..............................
[2026-01-25 16:43:03] 2026-01-25 21:42:11,350 | INFO     | PID=1273575 has CPU usage=18.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-01-25 16:43:03] 2026-01-25 21:42:11,351 | INFO     | .. there are 28 such processes running
[2026-01-25 16:43:03] 2026-01-25 21:42:11,456 | INFO     | 
[2026-01-25 16:43:03] 2026-01-25 21:42:11,456 | INFO     | job summary report
[2026-01-25 16:43:03] 2026-01-25 21:42:11,456 | INFO     | --------------------------------------------------
[2026-01-25 16:43:03] 2026-01-25 21:42:11,457 | INFO     | PanDA job id: 6979649282
[2026-01-25 16:43:03] 2026-01-25 21:42:11,457 | INFO     | task id: 48318042
[2026-01-25 16:43:03] 2026-01-25 21:42:11,457 | INFO     | errors: (none)
[2026-01-25 16:43:03] 2026-01-25 21:42:11,457 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-25 16:43:03] 2026-01-25 21:42:11,457 | INFO     | pilot state: finished 
[2026-01-25 16:43:03] 2026-01-25 21:42:11,457 | INFO     | transexitcode: 0
[2026-01-25 16:43:03] 2026-01-25 21:42:11,457 | INFO     | exeerrorcode: 0
[2026-01-25 16:43:03] 2026-01-25 21:42:11,457 | INFO     | exeerrordiag: 
[2026-01-25 16:43:03] 2026-01-25 21:42:11,457 | INFO     | exitcode: 0
[2026-01-25 16:43:03] 2026-01-25 21:42:11,458 | INFO     | exitmsg: OK
[2026-01-25 16:43:03] 2026-01-25 21:42:11,458 | INFO     | cpuconsumptiontime: 54245 s
[2026-01-25 16:43:03] 2026-01-25 21:42:11,458 | INFO     | nevents: 400
[2026-01-25 16:43:03] 2026-01-25 21:42:11,458 | INFO     | neventsw: 0
[2026-01-25 16:43:03] 2026-01-25 21:42:11,458 | INFO     | pid: 1293516
[2026-01-25 16:43:03] 2026-01-25 21:42:11,458 | INFO     | pgrp: 1293516
[2026-01-25 16:43:03] 2026-01-25 21:42:11,458 | INFO     | corecount: 8
[2026-01-25 16:43:03] 2026-01-25 21:42:11,458 | INFO     | event service: False
[2026-01-25 16:43:03] 2026-01-25 21:42:11,458 | INFO     | sizes: {0: 2283753, 1: 2284270, 2: 2284270, 146091: 2373093, 146092: 2373092, 146097: 2382146, 146098: 2382330, 146101: 2382524}
[2026-01-25 16:43:03] 2026-01-25 21:42:11,458 | INFO     | --------------------------------------------------
[2026-01-25 16:43:03] 2026-01-25 21:42:11,458 | INFO     | 
[2026-01-25 16:43:03] 2026-01-25 21:42:11,459 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2026-01-25 16:43:03] 2026-01-25 21:42:11,652 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-25 16:43:03] 2026-01-25 21:42:11,653 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-25 16:43:03] 2026-01-25 21:42:11,653 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-25 16:43:03] 2026-01-25 21:42:11,653 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-25 16:43:03] 2026-01-25 21:42:11,653 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-25 16:43:03] 2026-01-25 21:42:11,653 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-25 16:43:03] 2026-01-25 21:42:11,653 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-25 16:43:03] 2026-01-25 21:42:11,653 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-25 16:43:03] 2026-01-25 21:42:11,654 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-25 16:43:03] 2026-01-25 21:42:11,654 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-25 16:43:03] 2026-01-25 21:42:11,654 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-25 16:43:03] 2026-01-25 21:42:11,654 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-25 16:43:03] 2026-01-25 21:42:11,654 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-25 16:43:03] 2026-01-25 21:42:11,654 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-25 16:43:03] 2026-01-25 21:42:11,654 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-25 16:43:03] 2026-01-25 21:42:11,654 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-25 16:43:03] 2026-01-25 21:42:11,654 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-25 16:43:03] 2026-01-25 21:42:11,655 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-25 16:43:03] 2026-01-25 21:42:11,655 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-25 16:43:03] 2026-01-25 21:42:11,655 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-25 16:43:03] 2026-01-25 21:42:11,655 | INFO     | job 6979649282 has completed (purged errors)
[2026-01-25 16:43:03] 2026-01-25 21:42:11,655 | INFO     | overall cleanup function is called
[2026-01-25 16:43:03] 2026-01-25 21:42:12,722 | INFO     | --- collectZombieJob: --- 10, [1293516]
[2026-01-25 16:43:03] 2026-01-25 21:42:12,722 | INFO     | zombie collector waiting for pid 1293516
[2026-01-25 16:43:03] 2026-01-25 21:42:12,722 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-25 16:43:03] 2026-01-25 21:42:12,726 | INFO     | collected zombie processes
[2026-01-25 16:43:03] 2026-01-25 21:42:12,726 | INFO     | will attempt to kill all subprocesses of pid=1293516
[2026-01-25 16:43:03] 2026-01-25 21:42:14,849 | INFO     | process IDs to be killed: [1293516] (in reverse order)
[2026-01-25 16:43:03] 2026-01-25 21:42:15,036 | WARNING  | found no corresponding commands to process id(s)
[2026-01-25 16:43:03] 2026-01-25 21:42:15,037 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-25 16:43:03] 2026-01-25 21:42:15,072 | INFO     | did not find any defunct processes belonging to 1293516
[2026-01-25 16:43:03] 2026-01-25 21:42:15,088 | INFO     | did not find any defunct processes belonging to 1293516
[2026-01-25 16:43:03] 2026-01-25 21:42:15,088 | INFO     | ready for new job
[2026-01-25 16:43:03] 2026-01-25 21:42:15,088 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-25 16:43:03] 2026-01-25 21:42:15,096 | INFO     | **************************************
[2026-01-25 16:43:03] 2026-01-25 21:42:15,096 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-25 16:43:03] 2026-01-25 21:42:15,096 | INFO     | **************************************
[2026-01-25 16:43:03] 2026-01-25 21:42:15,096 | INFO     | 
[2026-01-25 16:43:03] 2026-01-25 21:42:15,098 | INFO     | architecture information:
[2026-01-25 16:43:03] 2026-01-25 21:42:15,099 | INFO     | executing command: cat /etc/os-release
[2026-01-25 16:43:03] 2026-01-25 21:42:15,184 | INFO     | cat /etc/os-release:
[2026-01-25 16:43:03] NAME="CentOS Linux"
[2026-01-25 16:43:03] VERSION="7 (Core)"
[2026-01-25 16:43:03] ID="centos"
[2026-01-25 16:43:03] ID_LIKE="rhel fedora"
[2026-01-25 16:43:03] VERSION_ID="7"
[2026-01-25 16:43:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-25 16:43:03] ANSI_COLOR="0;31"
[2026-01-25 16:43:03] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-25 16:43:03] HOME_URL="https://www.centos.org/"
[2026-01-25 16:43:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-25 16:43:03] 
[2026-01-25 16:43:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-25 16:43:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-25 16:43:03] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-25 16:43:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-25 16:43:03] 
[2026-01-25 16:43:03] 2026-01-25 21:42:15,185 | INFO     | **************************************
[2026-01-25 16:43:03] 2026-01-25 21:42:15,690 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2026-01-25 16:43:03] 2026-01-25 21:42:15,795 | INFO     | sufficient remaining disk space (71127007232 B)
[2026-01-25 16:43:03] 2026-01-25 21:42:15,795 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-25 16:43:03] 2026-01-25 21:42:15,795 | INFO     | current server update state: UPDATING_FINAL
[2026-01-25 16:43:03] 2026-01-25 21:42:15,796 | INFO     | update_server=False
[2026-01-25 16:43:03] 2026-01-25 21:42:15,796 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-25 16:43:03] 2026-01-25 21:42:15,803 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-25 16:43:03] 2026-01-25 21:42:16,002 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-25 16:43:03] 2026-01-25 21:42:16,294 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-25 16:43:03] 2026-01-25 21:42:16,294 | INFO     | aborting loop
[2026-01-25 16:43:03] 2026-01-25 21:42:16,609 | INFO     | all data control threads have been joined
[2026-01-25 16:43:03] 2026-01-25 21:42:16,801 | INFO     | [job] retrieve thread has finished
[2026-01-25 16:43:03] 2026-01-25 21:42:17,008 | INFO     | [job] queue monitor thread has finished
[2026-01-25 16:43:03] 2026-01-25 21:42:17,084 | INFO     | [payload] failed_post thread has finished
[2026-01-25 16:43:03] 2026-01-25 21:42:17,181 | INFO     | all payload control threads have been joined
[2026-01-25 16:43:03] 2026-01-25 21:42:17,228 | INFO     | all job control threads have been joined
[2026-01-25 16:43:03] 2026-01-25 21:42:17,326 | INFO     | [job] job monitor thread has finished
[2026-01-25 16:43:03] 2026-01-25 21:42:17,434 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-25 16:43:03] 2026-01-25 21:42:17,436 | INFO     | [job] create_data_payload thread has finished
[2026-01-25 16:43:03] 2026-01-25 21:42:17,442 | INFO     | [job] validate thread has finished
[2026-01-25 16:43:03] 2026-01-25 21:42:17,489 | INFO     | [payload] validate_pre thread has finished
[2026-01-25 16:43:03] 2026-01-25 21:42:17,492 | INFO     | [payload] execute_payloads thread has finished
[2026-01-25 16:43:03] 2026-01-25 21:42:17,615 | INFO     | [data] control thread has finished
[2026-01-25 16:43:03] 2026-01-25 21:42:17,813 | INFO     | [data] copytool_out thread has finished
[2026-01-25 16:43:03] 2026-01-25 21:42:17,935 | INFO     | [payload] validate_post thread has finished
[2026-01-25 16:43:03] 2026-01-25 21:42:18,117 | INFO     | [data] copytool_in thread has finished
[2026-01-25 16:43:03] 2026-01-25 21:42:18,187 | INFO     | [payload] control thread has finished
[2026-01-25 16:43:03] 2026-01-25 21:42:18,234 | INFO     | [job] control thread has finished
[2026-01-25 16:43:03] 2026-01-25 21:42:19,040 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-25 16:43:03] 2026-01-25 21:42:23,069 | INFO     | [data] queue_monitor thread has finished
[2026-01-25 16:43:03] 2026-01-25 21:42:44,851 | INFO     | PID=1273575 has CPU usage=4.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-25 16:43:03] 2026-01-25 21:42:44,852 | INFO     | .. there are 28 such processes running
[2026-01-25 16:43:03] 2026-01-25 21:42:44,852 | INFO     | found 0 job(s) in 20 queues
[2026-01-25 16:43:03] 2026-01-25 21:42:44,853 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-25 16:43:03] 2026-01-25 21:42:44,853 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-25 16:43:03] 2026-01-25 21:42:54,816 | INFO     | [monitor] cgroup control has ended
[2026-01-25 16:43:03] 2026-01-25 21:42:56,416 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139665832204096)>', '<ExcThread(monitor, started 139665340356352)>']
[2026-01-25 16:43:03] 2026-01-25 21:42:56,923 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-25 16:43:03] 2026-01-25 21:42:56,923 | INFO     | [monitor] control thread has ended
[2026-01-25 16:43:03] 2026-01-25 21:43:01,442 | INFO     | all workflow threads have been joined
[2026-01-25 16:43:03] 2026-01-25 21:43:01,442 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-25 16:43:03] 2026-01-25 21:43:01,443 | INFO     | traces error code: 0
[2026-01-25 16:43:03] 2026-01-25 21:43:01,443 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-25 16:43:03] 2026-01-25 21:43:01,649 [wrapper] ==== pilot stdout END ====
[2026-01-25 16:43:03] 2026-01-25 21:43:01,707 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-25 16:43:03] 2026-01-25 21:43:01,726 [wrapper] pilotpid: 1273575
[2026-01-25 16:43:03] 2026-01-25 21:43:01,741 [wrapper] Pilot exit status: 0
[2026-01-25 16:43:03] 2026-01-25 21:43:01,832 [wrapper] pandaids: 6979649282
[2026-01-25 16:43:03] 2026-01-25 21:43:01,923 [wrapper] cleanup supervisor_pilot 1585393 1273576
[2026-01-25 16:43:03] 2026-01-25 21:43:01,926 [wrapper] Test setup, not cleaning
[2026-01-25 16:43:03] 2026-01-25 21:43:01,930 [wrapper] apfmon messages muted
[2026-01-25 16:43:03] 2026-01-25 21:43:01,997 [wrapper] ==== wrapper stdout END ====
[2026-01-25 16:43:03] 2026-01-25 21:43:02,045 [wrapper] ==== wrapper stderr END ====
[2026-01-25 16:43:03]  *** Error codes and diagnostics ***
[2026-01-25 16:43:03]     "exeErrorCode": 0,
[2026-01-25 16:43:03]     "exeErrorDiag": "",
[2026-01-25 16:43:03]     "pilotErrorCode": 0,
[2026-01-25 16:43:03]     "pilotErrorDiag": "",
[2026-01-25 16:43:03]  *** Listing of results directory ***
[2026-01-25 16:43:03] total 704248
[2026-01-25 16:43:03] -rw-r--r--. 1 boincer umatlas    584422 Jan 23 14:36 pilot3.tar.gz
[2026-01-25 16:43:03] -rwx------. 1 boincer umatlas     36322 Jan 23 14:39 runpilot2-wrapper.sh
[2026-01-25 16:43:03] -rw-r--r--. 1 boincer umatlas      5111 Jan 23 14:42 queuedata.json
[2026-01-25 16:43:03] -rw-r--r--. 1 boincer umatlas       100 Jan 24 00:05 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-25 16:43:03] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 24 00:05 run_atlas
[2026-01-25 16:43:03] -rw-r--r--. 1 boincer umatlas       105 Jan 24 00:05 job.xml
[2026-01-25 16:43:03] -rw-r--r--. 2 boincer umatlas 494754165 Jan 24 00:05 EVNT.48318040._000010.pool.root.1
[2026-01-25 16:43:03] -rw-r--r--. 2 boincer umatlas     15845 Jan 24 00:05 start_atlas.sh
[2026-01-25 16:43:03] drwxrwx--x. 2 boincer umatlas      4096 Jan 24 00:05 shared
[2026-01-25 16:43:03] -rw-r--r--. 2 boincer umatlas    597752 Jan 24 00:05 input.tar.gz
[2026-01-25 16:43:03] -rw-r--r--. 1 boincer umatlas         0 Jan 24 00:05 boinc_lockfile
[2026-01-25 16:43:03] -rw-r--r--. 1 boincer umatlas      2527 Jan 24 00:05 pandaJob.out
[2026-01-25 16:43:03] -rw-------. 1 boincer umatlas        57 Jan 24 00:05 setup.sh.local
[2026-01-25 16:43:03] -rw-------. 1 boincer umatlas   1004238 Jan 24 00:06 agis_schedconf.cvmfs.json
[2026-01-25 16:43:03] -rw-------. 1 boincer umatlas       439 Jan 24 00:07 workernode_map.json
[2026-01-25 16:43:03] drwx------. 5 boincer umatlas      4096 Jan 24 00:07 pilot3
[2026-01-25 16:43:03] -rw-------. 1 boincer umatlas 186091582 Jan 25 16:35 HITS.48318042._000469.pool.root.1
[2026-01-25 16:43:03] -rw-r--r--. 1 boincer umatlas      6659 Jan 25 16:36 init_data.xml
[2026-01-25 16:43:03] -rw-r--r--. 1 boincer umatlas       531 Jan 25 16:36 boinc_task_state.xml
[2026-01-25 16:43:03] -rw-------. 1 boincer umatlas      1045 Jan 25 16:41 memory_monitor_summary.json
[2026-01-25 16:43:03] -rw-------. 1 boincer umatlas   1516246 Jan 25 16:42 agis_ddmendpoints.agis.ALL.json
[2026-01-25 16:43:03] -rw-------. 1 boincer umatlas   1966271 Jan 25 16:42 log.48318042._000469.job.log.tgz.1
[2026-01-25 16:43:03] -rw-------. 1 boincer umatlas      6389 Jan 25 16:42 heartbeat.json
[2026-01-25 16:43:03] -rw-------. 1 boincer umatlas        95 Jan 25 16:42 pilot_heartbeat.json
[2026-01-25 16:43:03] -rw-r--r--. 1 boincer umatlas        28 Jan 25 16:42 wrapper_checkpoint.txt
[2026-01-25 16:43:03] -rw-------. 1 boincer umatlas      4820 Jan 25 16:43 pilotlog.txt
[2026-01-25 16:43:03] -rw-------. 1 boincer umatlas  16210722 Jan 25 16:43 log.48318042._000469.job.log.1
[2026-01-25 16:43:03] -rw-r--r--. 1 boincer umatlas      8192 Jan 25 16:43 boinc_mmap_file
[2026-01-25 16:43:03] -rw-------. 1 boincer umatlas       357 Jan 25 16:43 output.list
[2026-01-25 16:43:03] -rw-r--r--. 1 boincer umatlas       620 Jan 25 16:43 runtime_log
[2026-01-25 16:43:03] -rw-------. 1 boincer umatlas  18196480 Jan 25 16:43 result.tar.gz
[2026-01-25 16:43:03] -rw-r--r--. 1 boincer umatlas      9328 Jan 25 16:43 runtime_log.err
[2026-01-25 16:43:03] -rw-------. 1 boincer umatlas       657 Jan 25 16:43 oIZKDmTBc38n9Rq4apOajLDm4fhM0noT9bVo0NGKDmStwKDm6MAUDm.diag
[2026-01-25 16:43:03] -rw-r--r--. 1 boincer umatlas     21286 Jan 25 16:43 stderr.txt
[2026-01-25 16:43:03] HITS file was successfully produced:
[2026-01-25 16:43:03] -rw-------. 1 boincer umatlas 186091582 Jan 25 16:35 shared/HITS.pool.root.1
[2026-01-25 16:43:03]  *** Contents of shared directory: ***
[2026-01-25 16:43:03] total 683272
[2026-01-25 16:43:03] -rw-r--r--. 2 boincer umatlas 494754165 Jan 24 00:05 ATLAS.root_0
[2026-01-25 16:43:03] -rw-r--r--. 2 boincer umatlas     15845 Jan 24 00:05 start_atlas.sh
[2026-01-25 16:43:03] -rw-r--r--. 2 boincer umatlas    597752 Jan 24 00:05 input.tar.gz
[2026-01-25 16:43:03] -rw-------. 1 boincer umatlas 186091582 Jan 25 16:35 HITS.pool.root.1
[2026-01-25 16:43:03] -rw-------. 1 boincer umatlas  18196480 Jan 25 16:43 result.tar.gz
16:43:04 (1250092): run_atlas exited; CPU time 61741.684531
16:43:04 (1250092): called boinc_finish(0)

</stderr_txt>
]]>

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