Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:21:18 (7505): wrapper (7.7.26015): starting
13:21:18 (7505): wrapper: running run_atlas (--nthreads 8)
[2026-01-24 13:21:18] Arguments: --nthreads 8
[2026-01-24 13:21:18] Threads: 8
[2026-01-24 13:21:18] Checking for CVMFS
[2026-01-24 13:21:19] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-24 13:21:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-24 13:21:22] Running cvmfs_config stat atlas.cern.ch
[2026-01-24 13:21:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-24 13:21:24] 2.11.2.0 14084 57007 133208 155473 2 93 14515093 25165824 939 130560 0 20275225 99.799 15667554 3728 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-24 13:21:24] CVMFS is ok
[2026-01-24 13:21:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-24 13:21:24] Checking for apptainer binary...
[2026-01-24 13:21:24] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-24 13:21:24] Running /usr/bin/apptainer --version
[2026-01-24 13:21:24] apptainer version 1.3.2-1.el7
[2026-01-24 13:21:24] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-24 13:21:39] cg-vwn482.simple-grid.lan
[2026-01-24 13:21:39] apptainer works
[2026-01-24 13:21:39] Set ATHENA_PROC_NUMBER=8
[2026-01-24 13:21:39] Set ATHENA_CORE_NUMBER=8
[2026-01-24 13:21:39] Starting ATLAS job with PandaID=6979896065
[2026-01-24 13:21:39] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-24 17:47:32]  *** The last 200 lines of the pilot log: ***
[2026-01-24 17:47:32] 2026-01-24 16:46:27,198 | INFO     | total number of processed events: 400 (read)
[2026-01-24 17:47:32] 2026-01-24 16:46:27,200 | INFO     | using path: /var/lib/boinc/slots/1/PanDA_Pilot-6979896065/memory_monitor_summary.json (trf name=prmon)
[2026-01-24 17:47:32] 2026-01-24 16:46:27,201 | INFO     | extracted standard info from prmon json
[2026-01-24 17:47:32] 2026-01-24 16:46:27,201 | INFO     | extracted standard memory fields from prmon json
[2026-01-24 17:47:32] 2026-01-24 16:46:27,201 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-24 17:47:32] 2026-01-24 16:46:27,202 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-24 17:47:32] 2026-01-24 16:46:27,202 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-24 17:47:32] 2026-01-24 16:46:27,207 | INFO     | fitting pss+swap vs Time
[2026-01-24 17:47:32] 2026-01-24 16:46:27,207 | INFO     | sum of square deviations: 4844974562.5
[2026-01-24 17:47:32] 2026-01-24 16:46:27,210 | INFO     | sum of deviations: 110760718188.5
[2026-01-24 17:47:32] 2026-01-24 16:46:27,210 | INFO     | mean x: 1769265559.5
[2026-01-24 17:47:32] 2026-01-24 16:46:27,210 | INFO     | mean y: 2430822.18
[2026-01-24 17:47:32] 2026-01-24 16:46:27,210 | INFO     | intersect: -40444659561.56818
[2026-01-24 17:47:32] 2026-01-24 16:46:27,210 | INFO     | chi2: 8.850246529004659
[2026-01-24 17:47:32] 2026-01-24 16:46:27,211 | INFO     | sum of square deviations: 4560048290.0
[2026-01-24 17:47:32] 2026-01-24 16:46:27,213 | INFO     | sum of deviations: 124815782631.00002
[2026-01-24 17:47:32] 2026-01-24 16:46:27,213 | INFO     | mean x: 1769265407.0
[2026-01-24 17:47:32] 2026-01-24 16:46:27,213 | INFO     | mean y: 2438201.3673469387
[2026-01-24 17:47:32] 2026-01-24 16:46:27,214 | INFO     | intersect: -48425173177.427895
[2026-01-24 17:47:32] 2026-01-24 16:46:27,214 | INFO     | chi2: 8.160632339318598
[2026-01-24 17:47:32] 2026-01-24 16:46:27,214 | INFO     | current chi2=8.160632339318598 (change=7.7920336730283 %)
[2026-01-24 17:47:32] 2026-01-24 16:46:27,214 | INFO     | right removable region: 244
[2026-01-24 17:47:32] 2026-01-24 16:46:27,215 | INFO     | sum of square deviations: 4560048290.0
[2026-01-24 17:47:32] 2026-01-24 16:46:27,220 | INFO     | sum of deviations: 23745105646.999977
[2026-01-24 17:47:32] 2026-01-24 16:46:27,220 | INFO     | mean x: 1769265712.0
[2026-01-24 17:47:32] 2026-01-24 16:46:27,220 | INFO     | mean y: 2477367.2163265306
[2026-01-24 17:47:32] 2026-01-24 16:46:27,221 | INFO     | intersect: -9210451658.378408
[2026-01-24 17:47:32] 2026-01-24 16:46:27,221 | INFO     | chi2: 3.7582009324082977
[2026-01-24 17:47:32] 2026-01-24 16:46:27,221 | INFO     | current chi2=3.7582009324082977 (change=57.535635644819 %)
[2026-01-24 17:47:32] 2026-01-24 16:46:27,222 | INFO     | sum of square deviations: 4286517580.0
[2026-01-24 17:47:32] 2026-01-24 16:46:27,224 | INFO     | sum of deviations: -41417791742.49999
[2026-01-24 17:47:32] 2026-01-24 16:46:27,224 | INFO     | mean x: 1769265864.5
[2026-01-24 17:47:32] 2026-01-24 16:46:27,224 | INFO     | mean y: 2513640.5458333334
[2026-01-24 17:47:32] 2026-01-24 16:46:27,224 | INFO     | intersect: 17097762579.890018
[2026-01-24 17:47:32] 2026-01-24 16:46:27,225 | INFO     | chi2: 1.071667306233849
[2026-01-24 17:47:32] 2026-01-24 16:46:27,225 | INFO     | current chi2=1.071667306233849 (change=71.48456600623766 %)
[2026-01-24 17:47:32] 2026-01-24 16:46:27,225 | INFO     | sum of square deviations: 4024149870.0
[2026-01-24 17:47:32] 2026-01-24 16:46:27,227 | INFO     | sum of deviations: -50818661288.000015
[2026-01-24 17:47:32] 2026-01-24 16:46:27,227 | INFO     | mean x: 1769266017.0
[2026-01-24 17:47:32] 2026-01-24 16:46:27,227 | INFO     | mean y: 2519064.3276595743
[2026-01-24 17:47:32] 2026-01-24 16:46:27,228 | INFO     | intersect: 22345556314.650513
[2026-01-24 17:47:32] 2026-01-24 16:46:27,228 | INFO     | chi2: 0.969744766393204
[2026-01-24 17:47:32] 2026-01-24 16:46:27,228 | INFO     | current chi2=0.969744766393204 (change=9.510651229888744 %)
[2026-01-24 17:47:32] 2026-01-24 16:46:27,228 | INFO     | left removable region: 30
[2026-01-24 17:47:32] 2026-01-24 16:46:27,229 | INFO     | sum of square deviations: 3038856977.5
[2026-01-24 17:47:32] 2026-01-24 16:46:27,230 | INFO     | sum of deviations: -17369826097.500015
[2026-01-24 17:47:32] 2026-01-24 16:46:27,231 | INFO     | mean x: 1769266291.5
[2026-01-24 17:47:32] 2026-01-24 16:46:27,231 | INFO     | mean y: 2517395.26635514
[2026-01-24 17:47:32] 2026-01-24 16:46:27,231 | INFO     | intersect: 10115480272.77768
[2026-01-24 17:47:32] 2026-01-24 16:46:27,231 | INFO     | chi2: 0.12413135148345288
[2026-01-24 17:47:32] 2026-01-24 16:46:27,231 | INFO     | current memory leak: -5.72 B/s (using 214 data points, chi2=0.12)
[2026-01-24 17:47:32] 2026-01-24 16:46:27,235 | INFO     | could have reported an average CPU frequency of 2249 MHz (12 samples)
[2026-01-24 17:47:32] 2026-01-24 16:46:27,235 | INFO     | ..............................
[2026-01-24 17:47:32] 2026-01-24 16:46:27,235 | INFO     | . Timing measurements:
[2026-01-24 17:47:32] 2026-01-24 16:46:27,235 | INFO     | . get job = 0 s
[2026-01-24 17:47:32] 2026-01-24 16:46:27,236 | INFO     | . initial setup = 120 s
[2026-01-24 17:47:32] 2026-01-24 16:46:27,236 | INFO     | . payload setup = 154 s
[2026-01-24 17:47:32] 2026-01-24 16:46:27,236 | INFO     | . stage-in = 0 s
[2026-01-24 17:47:32] 2026-01-24 16:46:27,236 | INFO     | . payload execution = 15331 s
[2026-01-24 17:47:32] 2026-01-24 16:46:27,236 | INFO     | . stage-out = 3 s
[2026-01-24 17:47:32] 2026-01-24 16:46:27,236 | INFO     | . log creation = 1 s
[2026-01-24 17:47:32] 2026-01-24 16:46:27,236 | INFO     | ..............................
[2026-01-24 17:47:32] 2026-01-24 16:46:27,394 | INFO     | 
[2026-01-24 17:47:32] 2026-01-24 16:46:27,394 | INFO     | job summary report
[2026-01-24 17:47:32] 2026-01-24 16:46:27,394 | INFO     | --------------------------------------------------
[2026-01-24 17:47:32] 2026-01-24 16:46:27,394 | INFO     | PanDA job id: 6979896065
[2026-01-24 17:47:32] 2026-01-24 16:46:27,394 | INFO     | task id: 48318010
[2026-01-24 17:47:32] 2026-01-24 16:46:27,395 | INFO     | errors: (none)
[2026-01-24 17:47:32] 2026-01-24 16:46:27,395 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-24 17:47:32] 2026-01-24 16:46:27,395 | INFO     | pilot state: finished 
[2026-01-24 17:47:32] 2026-01-24 16:46:27,395 | INFO     | transexitcode: 0
[2026-01-24 17:47:32] 2026-01-24 16:46:27,395 | INFO     | exeerrorcode: 0
[2026-01-24 17:47:32] 2026-01-24 16:46:27,395 | INFO     | exeerrordiag: 
[2026-01-24 17:47:32] 2026-01-24 16:46:27,395 | INFO     | exitcode: 0
[2026-01-24 17:47:32] 2026-01-24 16:46:27,395 | INFO     | exitmsg: OK
[2026-01-24 17:47:32] 2026-01-24 16:46:27,395 | INFO     | cpuconsumptiontime: 55078 s
[2026-01-24 17:47:32] 2026-01-24 16:46:27,395 | INFO     | nevents: 400
[2026-01-24 17:47:32] 2026-01-24 16:46:27,396 | INFO     | neventsw: 0
[2026-01-24 17:47:32] 2026-01-24 16:46:27,396 | INFO     | pid: 16052
[2026-01-24 17:47:32] 2026-01-24 16:46:27,396 | INFO     | pgrp: 16052
[2026-01-24 17:47:32] 2026-01-24 16:46:27,396 | INFO     | corecount: 8
[2026-01-24 17:47:32] 2026-01-24 16:46:27,396 | INFO     | event service: False
[2026-01-24 17:47:32] 2026-01-24 16:46:27,396 | INFO     | sizes: {0: 2284173, 1: 2284261, 11: 2284261, 15490: 2315359, 15491: 2315358, 15496: 2324412, 15498: 2324596, 15501: 2324790}
[2026-01-24 17:47:32] 2026-01-24 16:46:27,396 | INFO     | --------------------------------------------------
[2026-01-24 17:47:32] 2026-01-24 16:46:27,396 | INFO     | 
[2026-01-24 17:47:32] 2026-01-24 16:46:27,396 | INFO     | executing command: ls -lF /var/lib/boinc/slots/1
[2026-01-24 17:47:32] 2026-01-24 16:46:27,990 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-24 17:47:32] 2026-01-24 16:46:27,990 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-24 17:47:32] 2026-01-24 16:46:27,990 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-24 17:47:32] 2026-01-24 16:46:27,990 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-24 17:47:32] 2026-01-24 16:46:27,990 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-24 17:47:32] 2026-01-24 16:46:27,990 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-24 17:47:32] 2026-01-24 16:46:27,990 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-24 17:47:32] 2026-01-24 16:46:27,990 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-24 17:47:32] 2026-01-24 16:46:27,991 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-24 17:47:32] 2026-01-24 16:46:27,991 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-24 17:47:32] 2026-01-24 16:46:27,991 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-24 17:47:32] 2026-01-24 16:46:27,991 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-24 17:47:32] 2026-01-24 16:46:27,991 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-24 17:47:32] 2026-01-24 16:46:27,991 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-24 17:47:32] 2026-01-24 16:46:27,991 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-24 17:47:32] 2026-01-24 16:46:27,991 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-24 17:47:32] 2026-01-24 16:46:27,991 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-24 17:47:32] 2026-01-24 16:46:27,991 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-24 17:47:32] 2026-01-24 16:46:27,992 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-24 17:47:32] 2026-01-24 16:46:27,992 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-24 17:47:32] 2026-01-24 16:46:27,992 | INFO     | job 6979896065 has completed (purged errors)
[2026-01-24 17:47:32] 2026-01-24 16:46:27,992 | INFO     | overall cleanup function is called
[2026-01-24 17:47:32] 2026-01-24 16:46:28,257 | INFO     | PID=11567 has CPU usage=7.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-24 17:47:32] 2026-01-24 16:46:28,257 | INFO     | .. there are 2 such processes running
[2026-01-24 17:47:32] 2026-01-24 16:46:29,001 | INFO     | --- collectZombieJob: --- 10, [16052]
[2026-01-24 17:47:32] 2026-01-24 16:46:29,001 | INFO     | zombie collector waiting for pid 16052
[2026-01-24 17:47:32] 2026-01-24 16:46:29,001 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-24 17:47:32] 2026-01-24 16:46:29,001 | INFO     | collected zombie processes
[2026-01-24 17:47:32] 2026-01-24 16:46:29,002 | INFO     | will attempt to kill all subprocesses of pid=16052
[2026-01-24 17:47:32] 2026-01-24 16:46:29,094 | INFO     | process IDs to be killed: [16052] (in reverse order)
[2026-01-24 17:47:32] 2026-01-24 16:46:29,953 | WARNING  | found no corresponding commands to process id(s)
[2026-01-24 17:47:32] 2026-01-24 16:46:29,954 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-24 17:47:32] 2026-01-24 16:46:29,956 | INFO     | did not find any defunct processes belonging to 16052
[2026-01-24 17:47:32] 2026-01-24 16:46:29,958 | INFO     | did not find any defunct processes belonging to 16052
[2026-01-24 17:47:32] 2026-01-24 16:46:29,958 | INFO     | ready for new job
[2026-01-24 17:47:32] 2026-01-24 16:46:29,958 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-24 17:47:32] 2026-01-24 16:46:29,960 | INFO     | **************************************
[2026-01-24 17:47:32] 2026-01-24 16:46:29,960 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-24 17:47:32] 2026-01-24 16:46:29,960 | INFO     | **************************************
[2026-01-24 17:47:32] 2026-01-24 16:46:29,960 | INFO     | 
[2026-01-24 17:47:32] 2026-01-24 16:46:29,961 | INFO     | pilot is running in a VM
[2026-01-24 17:47:32] 2026-01-24 16:46:29,961 | INFO     | architecture information:
[2026-01-24 17:47:32] 2026-01-24 16:46:29,970 | INFO     | executing command: cat /etc/os-release
[2026-01-24 17:47:32] 2026-01-24 16:46:30,195 | INFO     | cat /etc/os-release:
[2026-01-24 17:47:32] NAME="CentOS Linux"
[2026-01-24 17:47:32] VERSION="7 (Core)"
[2026-01-24 17:47:32] ID="centos"
[2026-01-24 17:47:32] ID_LIKE="rhel fedora"
[2026-01-24 17:47:32] VERSION_ID="7"
[2026-01-24 17:47:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-24 17:47:32] ANSI_COLOR="0;31"
[2026-01-24 17:47:32] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-24 17:47:32] HOME_URL="https://www.centos.org/"
[2026-01-24 17:47:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-24 17:47:32] 
[2026-01-24 17:47:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-24 17:47:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-24 17:47:32] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-24 17:47:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-24 17:47:32] 
[2026-01-24 17:47:32] 2026-01-24 16:46:30,196 | INFO     | **************************************
[2026-01-24 17:47:32] 2026-01-24 16:46:30,699 | INFO     | executing command: df -mP /var/lib/boinc/slots/1
[2026-01-24 17:47:32] 2026-01-24 16:46:30,897 | INFO     | sufficient remaining disk space (493435748352 B)
[2026-01-24 17:47:32] 2026-01-24 16:46:30,898 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-24 17:47:32] 2026-01-24 16:46:30,898 | INFO     | current server update state: UPDATING_FINAL
[2026-01-24 17:47:32] 2026-01-24 16:46:30,898 | INFO     | update_server=False
[2026-01-24 17:47:32] 2026-01-24 16:46:30,898 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-24 17:47:32] 2026-01-24 16:46:30,899 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-24 17:47:32] 2026-01-24 16:46:30,899 | INFO     | aborting loop
[2026-01-24 17:47:32] 2026-01-24 16:46:30,902 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-24 17:47:32] 2026-01-24 16:46:30,909 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-24 17:47:32] 2026-01-24 16:46:31,023 | INFO     | all job control threads have been joined
[2026-01-24 17:47:32] 2026-01-24 16:46:31,150 | INFO     | all payload control threads have been joined
[2026-01-24 17:47:32] 2026-01-24 16:46:31,751 | INFO     | all data control threads have been joined
[2026-01-24 17:47:32] 2026-01-24 16:46:31,904 | INFO     | [job] retrieve thread has finished
[2026-01-24 17:47:32] 2026-01-24 16:46:31,905 | INFO     | [job] job monitor thread has finished
[2026-01-24 17:47:32] 2026-01-24 16:46:32,029 | INFO     | [job] control thread has finished
[2026-01-24 17:47:32] 2026-01-24 16:46:32,066 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-24 17:47:32] 2026-01-24 16:46:32,074 | INFO     | [data] copytool_in thread has finished
[2026-01-24 17:47:32] 2026-01-24 16:46:32,092 | INFO     | [job] validate thread has finished
[2026-01-24 17:47:32] 2026-01-24 16:46:32,156 | INFO     | [payload] control thread has finished
[2026-01-24 17:47:32] 2026-01-24 16:46:32,408 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-24 17:47:32] 2026-01-24 16:46:32,451 | INFO     | [payload] validate_pre thread has finished
[2026-01-24 17:47:32] 2026-01-24 16:46:32,642 | INFO     | [payload] validate_post thread has finished
[2026-01-24 17:47:32] 2026-01-24 16:46:32,757 | INFO     | [data] control thread has finished
[2026-01-24 17:47:32] 2026-01-24 16:46:32,766 | INFO     | [payload] execute_payloads thread has finished
[2026-01-24 17:47:32] 2026-01-24 16:46:32,826 | INFO     | [job] create_data_payload thread has finished
[2026-01-24 17:47:32] 2026-01-24 16:46:32,909 | INFO     | [data] copytool_out thread has finished
[2026-01-24 17:47:32] 2026-01-24 16:46:33,289 | INFO     | [payload] failed_post thread has finished
[2026-01-24 17:47:32] 2026-01-24 16:46:33,414 | INFO     | [job] queue monitor thread has finished
[2026-01-24 17:47:32] 2026-01-24 16:46:34,918 | INFO     | [data] queue_monitor thread has finished
[2026-01-24 17:47:32] 2026-01-24 16:47:00,397 | INFO     | PID=11567 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-24 17:47:32] 2026-01-24 16:47:00,398 | INFO     | .. there are 2 such processes running
[2026-01-24 17:47:32] 2026-01-24 16:47:00,398 | INFO     | found 0 job(s) in 20 queues
[2026-01-24 17:47:32] 2026-01-24 16:47:00,398 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-24 17:47:32] 2026-01-24 16:47:00,398 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-24 17:47:32] 2026-01-24 16:47:21,139 | INFO     | [monitor] cgroup control has ended
[2026-01-24 17:47:32] 2026-01-24 16:47:22,764 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140295604926272)>', '<ExcThread(monitor, started 140295386593024)>']
[2026-01-24 17:47:32] 2026-01-24 16:47:23,536 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-24 17:47:32] 2026-01-24 16:47:23,536 | INFO     | [monitor] control thread has ended
[2026-01-24 17:47:32] 2026-01-24 16:47:27,790 | INFO     | all workflow threads have been joined
[2026-01-24 17:47:32] 2026-01-24 16:47:27,790 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-24 17:47:32] 2026-01-24 16:47:27,790 | INFO     | traces error code: 0
[2026-01-24 17:47:32] 2026-01-24 16:47:27,791 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-24 17:47:32] 2026-01-24 16:47:28,225 [wrapper] ==== pilot stdout END ====
[2026-01-24 17:47:32] 2026-01-24 16:47:28,310 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-24 17:47:32] 2026-01-24 16:47:28,414 [wrapper] pilotpid: 11567
[2026-01-24 17:47:32] 2026-01-24 16:47:28,538 [wrapper] Pilot exit status: 0
[2026-01-24 17:47:32] 2026-01-24 16:47:29,091 [wrapper] pandaids: 6979896065
[2026-01-24 17:47:32] 2026-01-24 16:47:29,365 [wrapper] cleanup supervisor_pilot 22813 11568
[2026-01-24 17:47:32] 2026-01-24 16:47:29,371 [wrapper] Test setup, not cleaning
[2026-01-24 17:47:32] 2026-01-24 16:47:29,374 [wrapper] apfmon messages muted
[2026-01-24 17:47:32] 2026-01-24 16:47:29,379 [wrapper] ==== wrapper stdout END ====
[2026-01-24 17:47:32] 2026-01-24 16:47:29,471 [wrapper] ==== wrapper stderr END ====
[2026-01-24 17:47:32]  *** Error codes and diagnostics ***
[2026-01-24 17:47:32]     "exeErrorCode": 0,
[2026-01-24 17:47:32]     "exeErrorDiag": "",
[2026-01-24 17:47:32]     "pilotErrorCode": 0,
[2026-01-24 17:47:32]     "pilotErrorDiag": "",
[2026-01-24 17:47:32]  *** Listing of results directory ***
[2026-01-24 17:47:32] total 669492
[2026-01-24 17:47:32] -rw-r--r--. 1 boinc boinc    584422 Jan 23 22:41 pilot3.tar.gz
[2026-01-24 17:47:32] -rwx------. 1 boinc boinc     36322 Jan 23 22:44 runpilot2-wrapper.sh
[2026-01-24 17:47:32] -rw-r--r--. 1 boinc boinc      5111 Jan 23 22:46 queuedata.json
[2026-01-24 17:47:32] -rw-r--r--. 1 boinc boinc       100 Jan 24 13:21 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-24 17:47:32] -rwxr-xr-x. 1 boinc boinc      7986 Jan 24 13:21 run_atlas
[2026-01-24 17:47:32] -rw-r--r--. 1 boinc boinc       105 Jan 24 13:21 job.xml
[2026-01-24 17:47:32] -rw-r--r--. 1 boinc boinc      6391 Jan 24 13:21 init_data.xml
[2026-01-24 17:47:32] -rw-r--r--. 2 boinc boinc 494541866 Jan 24 13:21 EVNT.48318008._000005.pool.root.1
[2026-01-24 17:47:32] -rw-r--r--. 2 boinc boinc     15845 Jan 24 13:21 start_atlas.sh
[2026-01-24 17:47:32] drwxrwx--x. 2 boinc boinc        68 Jan 24 13:21 shared
[2026-01-24 17:47:32] -rw-r--r--. 2 boinc boinc    597751 Jan 24 13:21 input.tar.gz
[2026-01-24 17:47:32] -rw-r--r--. 1 boinc boinc         0 Jan 24 13:21 boinc_lockfile
[2026-01-24 17:47:32] -rw-r--r--. 1 boinc boinc      2518 Jan 24 13:21 pandaJob.out
[2026-01-24 17:47:32] -rw-------. 1 boinc boinc       415 Jan 24 13:27 workernode_map.json
[2026-01-24 17:47:32] -rw-------. 1 boinc boinc   1004246 Jan 24 13:27 agis_schedconf.cvmfs.json
[2026-01-24 17:47:32] drwx------. 5 boinc boinc      4096 Jan 24 13:27 pilot3
[2026-01-24 17:47:32] -rw-------. 1 boinc boinc 181717587 Jan 24 17:44 HITS.48318010._000239.pool.root.1
[2026-01-24 17:47:32] -rw-r--r--. 1 boinc boinc       532 Jan 24 17:45 boinc_task_state.xml
[2026-01-24 17:47:32] -rw-------. 1 boinc boinc        95 Jan 24 17:46 pilot_heartbeat.json
[2026-01-24 17:47:32] -rw-------. 1 boinc boinc      1024 Jan 24 17:46 memory_monitor_summary.json
[2026-01-24 17:47:32] -rw-------. 1 boinc boinc   1516246 Jan 24 17:46 agis_ddmendpoints.agis.ALL.json
[2026-01-24 17:47:32] -rw-------. 1 boinc boinc    508841 Jan 24 17:46 log.48318010._000239.job.log.tgz.1
[2026-01-24 17:47:32] -rw-------. 1 boinc boinc      6314 Jan 24 17:46 heartbeat.json
[2026-01-24 17:47:32] -rw-r--r--. 1 boinc boinc      8192 Jan 24 17:47 boinc_mmap_file
[2026-01-24 17:47:32] -rw-r--r--. 1 boinc boinc        28 Jan 24 17:47 wrapper_checkpoint.txt
[2026-01-24 17:47:32] -rw-------. 1 boinc boinc      4880 Jan 24 17:47 pilotlog.txt
[2026-01-24 17:47:32] -rw-------. 1 boinc boinc   2180758 Jan 24 17:47 log.48318010._000239.job.log.1
[2026-01-24 17:47:32] -rw-------. 1 boinc boinc       357 Jan 24 17:47 output.list
[2026-01-24 17:47:32] -rw-r--r--. 1 boinc boinc       620 Jan 24 17:47 runtime_log
[2026-01-24 17:47:32] -rw-------. 1 boinc boinc   2703360 Jan 24 17:47 result.tar.gz
[2026-01-24 17:47:32] -rw-r--r--. 1 boinc boinc      8816 Jan 24 17:47 runtime_log.err
[2026-01-24 17:47:32] -rw-------. 1 boinc boinc       655 Jan 24 17:47 gJVNDmh8d38nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm3f3KDmDiVP9m.diag
[2026-01-24 17:47:32] -rw-r--r--. 1 boinc boinc     20807 Jan 24 17:47 stderr.txt
[2026-01-24 17:47:32] HITS file was successfully produced:
[2026-01-24 17:47:32] -rw-------. 1 boinc boinc 181717587 Jan 24 17:44 shared/HITS.pool.root.1
[2026-01-24 17:47:32]  *** Contents of shared directory: ***
[2026-01-24 17:47:32] total 663652
[2026-01-24 17:47:32] -rw-r--r--. 2 boinc boinc 494541866 Jan 24 13:21 ATLAS.root_0
[2026-01-24 17:47:32] -rw-r--r--. 2 boinc boinc     15845 Jan 24 13:21 start_atlas.sh
[2026-01-24 17:47:32] -rw-r--r--. 2 boinc boinc    597751 Jan 24 13:21 input.tar.gz
[2026-01-24 17:47:32] -rw-------. 1 boinc boinc 181717587 Jan 24 17:44 HITS.pool.root.1
[2026-01-24 17:47:32] -rw-------. 1 boinc boinc   2703360 Jan 24 17:47 result.tar.gz
17:47:34 (7505): run_atlas exited; CPU time 55244.671385
17:47:34 (7505): called boinc_finish(0)

</stderr_txt>
]]>

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