Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:18:15 (1886443): wrapper (7.7.26015): starting
11:18:15 (1886443): wrapper: running run_atlas (--nthreads 6)
[2026-01-24 11:18:15] Arguments: --nthreads 6
[2026-01-24 11:18:15] Threads: 6
[2026-01-24 11:18:15] Checking for CVMFS
[2026-01-24 11:18:16] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-24 11:18:33] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-24 11:18:33] Running cvmfs_config stat atlas.cern.ch
[2026-01-24 11:18:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-24 11:18:39] 2.13.3.0 1625780 1162 62804 155456 4 1 13447185 20971520 0 130560 0 863977 99.993 38446 14 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.35.143:3126 1
[2026-01-24 11:18:39] CVMFS is ok
[2026-01-24 11:18:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-24 11:18:39] Checking for apptainer binary...
[2026-01-24 11:18:39] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-24 11:18:39] Running /usr/bin/apptainer --version
[2026-01-24 11:18:39] apptainer version 1.4.5-2.el9
[2026-01-24 11:18:39] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-24 11:18:39] testio005
[2026-01-24 11:18:39] apptainer works
[2026-01-24 11:18:39] Set ATHENA_PROC_NUMBER=6
[2026-01-24 11:18:39] Set ATHENA_CORE_NUMBER=6
[2026-01-24 11:18:39] Starting ATLAS job with PandaID=6979120997
[2026-01-24 11:18:39] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-24 13:12:12]  *** The last 200 lines of the pilot log: ***
[2026-01-24 13:12:12] 2026-01-24 04:11:07,839 | INFO     | job 6979120997 has state=finished
[2026-01-24 13:12:12] 2026-01-24 04:11:07,839 | INFO     | preparing for final server update for job 6979120997 in state='finished'
[2026-01-24 13:12:12] 2026-01-24 04:11:07,839 | INFO     | reading metadata from: /var/lib/boinc/slots/1/PanDA_Pilot-6979120997/jobReport.json
[2026-01-24 13:12:12] 2026-01-24 04:11:07,841 | INFO     | added worker_node to metadata from /var/lib/boinc/slots/1/workernode_map.json
[2026-01-24 13:12:12] 2026-01-24 04:11:07,842 | INFO     | this job has now completed (state=finished)
[2026-01-24 13:12:12] 2026-01-24 04:11:07,842 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-24 13:12:12] 2026-01-24 04:11:07,842 | INFO     | log transfer has been attempted: DONE
[2026-01-24 13:12:12] 2026-01-24 04:11:07,842 | INFO     | job 6979120997 has finished - writing final server update
[2026-01-24 13:12:12] 2026-01-24 04:11:07,842 | INFO     | total number of processed events: 400 (read)
[2026-01-24 13:12:12] 2026-01-24 04:11:07,845 | INFO     | using path: /var/lib/boinc/slots/1/PanDA_Pilot-6979120997/memory_monitor_summary.json (trf name=prmon)
[2026-01-24 13:12:12] 2026-01-24 04:11:07,846 | INFO     | extracted standard info from prmon json
[2026-01-24 13:12:12] 2026-01-24 04:11:07,846 | INFO     | extracted standard memory fields from prmon json
[2026-01-24 13:12:12] 2026-01-24 04:11:07,846 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-24 13:12:12] 2026-01-24 04:11:07,846 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-24 13:12:12] 2026-01-24 04:11:07,846 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-24 13:12:12] 2026-01-24 04:11:07,848 | INFO     | fitting pss+swap vs Time
[2026-01-24 13:12:12] 2026-01-24 04:11:07,848 | INFO     | sum of square deviations: 401533110.0
[2026-01-24 13:12:12] 2026-01-24 04:11:07,849 | INFO     | sum of deviations: -4497440208.0
[2026-01-24 13:12:12] 2026-01-24 04:11:07,849 | INFO     | mean x: 1769224512.0
[2026-01-24 13:12:12] 2026-01-24 04:11:07,849 | INFO     | mean y: 2505372.862385321
[2026-01-24 13:12:12] 2026-01-24 04:11:07,849 | INFO     | intersect: 19819006824.630527
[2026-01-24 13:12:12] 2026-01-24 04:11:07,849 | INFO     | chi2: 1.7247868599713976
[2026-01-24 13:12:12] 2026-01-24 04:11:07,850 | INFO     | sum of square deviations: 348769330.0
[2026-01-24 13:12:12] 2026-01-24 04:11:07,850 | INFO     | sum of deviations: -3624431266.0
[2026-01-24 13:12:12] 2026-01-24 04:11:07,850 | INFO     | mean x: 1769224359.5
[2026-01-24 13:12:12] 2026-01-24 04:11:07,850 | INFO     | mean y: 2507899.5
[2026-01-24 13:12:12] 2026-01-24 04:11:07,850 | INFO     | intersect: 18388390870.174698
[2026-01-24 13:12:12] 2026-01-24 04:11:07,851 | INFO     | chi2: 1.726644395989686
[2026-01-24 13:12:12] 2026-01-24 04:11:07,851 | INFO     | current chi2=1.726644395989686 (change=-0.10769655436261981 %)
[2026-01-24 13:12:12] 2026-01-24 04:11:07,851 | INFO     | right removable region: 103
[2026-01-24 13:12:12] 2026-01-24 04:11:07,851 | INFO     | sum of square deviations: 348769330.0
[2026-01-24 13:12:12] 2026-01-24 04:11:07,851 | INFO     | sum of deviations: -21449664331.499996
[2026-01-24 13:12:12] 2026-01-24 04:11:07,852 | INFO     | mean x: 1769224664.5
[2026-01-24 13:12:12] 2026-01-24 04:11:07,852 | INFO     | mean y: 2553305.644230769
[2026-01-24 13:12:12] 2026-01-24 04:11:07,852 | INFO     | intersect: 108811648361.49588
[2026-01-24 13:12:12] 2026-01-24 04:11:07,852 | INFO     | chi2: 0.08007924988458794
[2026-01-24 13:12:12] 2026-01-24 04:11:07,852 | INFO     | current chi2=0.08007924988458794 (change=95.3571509765609 %)
[2026-01-24 13:12:12] 2026-01-24 04:11:07,852 | INFO     | sum of square deviations: 300842850.0
[2026-01-24 13:12:12] 2026-01-24 04:11:07,853 | INFO     | sum of deviations: -17673927293.0
[2026-01-24 13:12:12] 2026-01-24 04:11:07,853 | INFO     | mean x: 1769224817.0
[2026-01-24 13:12:12] 2026-01-24 04:11:07,853 | INFO     | mean y: 2541179.262626263
[2026-01-24 13:12:12] 2026-01-24 04:11:07,853 | INFO     | intersect: 103941028600.94882
[2026-01-24 13:12:12] 2026-01-24 04:11:07,853 | INFO     | chi2: 0.07122731909683079
[2026-01-24 13:12:12] 2026-01-24 04:11:07,853 | INFO     | current chi2=0.07122731909683079 (change=11.053963168379765 %)
[2026-01-24 13:12:12] 2026-01-24 04:11:07,853 | INFO     | left removable region: 20
[2026-01-24 13:12:12] 2026-01-24 04:11:07,853 | INFO     | sum of square deviations: 177275882.0
[2026-01-24 13:12:12] 2026-01-24 04:11:07,854 | INFO     | sum of deviations: -9598987877.000002
[2026-01-24 13:12:12] 2026-01-24 04:11:07,854 | INFO     | mean x: 1769224939.0
[2026-01-24 13:12:12] 2026-01-24 04:11:07,854 | INFO     | mean y: 2520096.1566265062
[2026-01-24 13:12:12] 2026-01-24 04:11:07,854 | INFO     | intersect: 95801049199.77756
[2026-01-24 13:12:12] 2026-01-24 04:11:07,854 | INFO     | chi2: 0.042239728130187164
[2026-01-24 13:12:12] 2026-01-24 04:11:07,854 | INFO     | current memory leak: -54.15 B/s (using 83 data points, chi2=0.04)
[2026-01-24 13:12:12] 2026-01-24 04:11:07,855 | INFO     | could have reported an average CPU frequency of 3312 MHz (7 samples)
[2026-01-24 13:12:12] 2026-01-24 04:11:07,855 | INFO     | ..............................
[2026-01-24 13:12:12] 2026-01-24 04:11:07,855 | INFO     | . Timing measurements:
[2026-01-24 13:12:12] 2026-01-24 04:11:07,855 | INFO     | . get job = 0 s
[2026-01-24 13:12:12] 2026-01-24 04:11:07,855 | INFO     | . initial setup = 9 s
[2026-01-24 13:12:12] 2026-01-24 04:11:07,855 | INFO     | . payload setup = 6 s
[2026-01-24 13:12:12] 2026-01-24 04:11:07,855 | INFO     | . stage-in = 0 s
[2026-01-24 13:12:12] 2026-01-24 04:11:07,855 | INFO     | . payload execution = 6645 s
[2026-01-24 13:12:12] 2026-01-24 04:11:07,855 | INFO     | . stage-out = 0 s
[2026-01-24 13:12:12] 2026-01-24 04:11:07,855 | INFO     | . log creation = 0 s
[2026-01-24 13:12:12] 2026-01-24 04:11:07,855 | INFO     | ..............................
[2026-01-24 13:12:12] 2026-01-24 04:11:07,925 | INFO     | 
[2026-01-24 13:12:12] 2026-01-24 04:11:07,925 | INFO     | job summary report
[2026-01-24 13:12:12] 2026-01-24 04:11:07,925 | INFO     | --------------------------------------------------
[2026-01-24 13:12:12] 2026-01-24 04:11:07,925 | INFO     | PanDA job id: 6979120997
[2026-01-24 13:12:12] 2026-01-24 04:11:07,925 | INFO     | task id: 48318010
[2026-01-24 13:12:12] 2026-01-24 04:11:07,925 | INFO     | errors: (none)
[2026-01-24 13:12:12] 2026-01-24 04:11:07,925 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-24 13:12:12] 2026-01-24 04:11:07,925 | INFO     | pilot state: finished 
[2026-01-24 13:12:12] 2026-01-24 04:11:07,925 | INFO     | transexitcode: 0
[2026-01-24 13:12:12] 2026-01-24 04:11:07,926 | INFO     | exeerrorcode: 0
[2026-01-24 13:12:12] 2026-01-24 04:11:07,926 | INFO     | exeerrordiag: 
[2026-01-24 13:12:12] 2026-01-24 04:11:07,926 | INFO     | exitcode: 0
[2026-01-24 13:12:12] 2026-01-24 04:11:07,926 | INFO     | exitmsg: OK
[2026-01-24 13:12:12] 2026-01-24 04:11:07,926 | INFO     | cpuconsumptiontime: 36974 s
[2026-01-24 13:12:12] 2026-01-24 04:11:07,926 | INFO     | nevents: 400
[2026-01-24 13:12:12] 2026-01-24 04:11:07,926 | INFO     | neventsw: 0
[2026-01-24 13:12:12] 2026-01-24 04:11:07,926 | INFO     | pid: 1895216
[2026-01-24 13:12:12] 2026-01-24 04:11:07,926 | INFO     | pgrp: 1895216
[2026-01-24 13:12:12] 2026-01-24 04:11:07,926 | INFO     | corecount: 6
[2026-01-24 13:12:12] 2026-01-24 04:11:07,926 | INFO     | event service: False
[2026-01-24 13:12:12] 2026-01-24 04:11:07,926 | INFO     | sizes: {0: 2283855, 1: 2284259, 11: 2284259, 6656: 2311472, 6658: 2320470, 6661: 2320848}
[2026-01-24 13:12:12] 2026-01-24 04:11:07,926 | INFO     | --------------------------------------------------
[2026-01-24 13:12:12] 2026-01-24 04:11:07,926 | INFO     | 
[2026-01-24 13:12:12] 2026-01-24 04:11:07,927 | INFO     | executing command: ls -lF /var/lib/boinc/slots/1
[2026-01-24 13:12:12] 2026-01-24 04:11:07,944 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-24 13:12:12] 2026-01-24 04:11:07,944 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-24 13:12:12] 2026-01-24 04:11:07,944 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-24 13:12:12] 2026-01-24 04:11:07,945 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-24 13:12:12] 2026-01-24 04:11:07,945 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-24 13:12:12] 2026-01-24 04:11:07,945 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-24 13:12:12] 2026-01-24 04:11:07,945 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-24 13:12:12] 2026-01-24 04:11:07,945 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-24 13:12:12] 2026-01-24 04:11:07,945 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-24 13:12:12] 2026-01-24 04:11:07,945 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-24 13:12:12] 2026-01-24 04:11:07,945 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-24 13:12:12] 2026-01-24 04:11:07,945 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-24 13:12:12] 2026-01-24 04:11:07,945 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-24 13:12:12] 2026-01-24 04:11:07,945 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-24 13:12:12] 2026-01-24 04:11:07,945 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-24 13:12:12] 2026-01-24 04:11:07,945 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-24 13:12:12] 2026-01-24 04:11:07,946 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-24 13:12:12] 2026-01-24 04:11:07,946 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-24 13:12:12] 2026-01-24 04:11:07,946 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-24 13:12:12] 2026-01-24 04:11:07,946 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-24 13:12:12] 2026-01-24 04:11:07,946 | INFO     | job 6979120997 has completed (purged errors)
[2026-01-24 13:12:12] 2026-01-24 04:11:07,946 | INFO     | overall cleanup function is called
[2026-01-24 13:12:12] 2026-01-24 04:11:08,953 | INFO     | --- collectZombieJob: --- 10, [1895216]
[2026-01-24 13:12:12] 2026-01-24 04:11:08,953 | INFO     | zombie collector waiting for pid 1895216
[2026-01-24 13:12:12] 2026-01-24 04:11:08,953 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-24 13:12:12] 2026-01-24 04:11:08,953 | INFO     | collected zombie processes
[2026-01-24 13:12:12] 2026-01-24 04:11:08,953 | INFO     | will attempt to kill all subprocesses of pid=1895216
[2026-01-24 13:12:12] 2026-01-24 04:11:09,043 | INFO     | process IDs to be killed: [1895216] (in reverse order)
[2026-01-24 13:12:12] 2026-01-24 04:11:09,082 | WARNING  | found no corresponding commands to process id(s)
[2026-01-24 13:12:12] 2026-01-24 04:11:09,082 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-24 13:12:12] 2026-01-24 04:11:09,085 | INFO     | did not find any defunct processes belonging to 1895216
[2026-01-24 13:12:12] 2026-01-24 04:11:09,088 | INFO     | did not find any defunct processes belonging to 1895216
[2026-01-24 13:12:12] 2026-01-24 04:11:09,088 | INFO     | ready for new job
[2026-01-24 13:12:12] 2026-01-24 04:11:09,088 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-24 13:12:12] 2026-01-24 04:11:09,090 | INFO     | **************************************
[2026-01-24 13:12:12] 2026-01-24 04:11:09,090 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-24 13:12:12] 2026-01-24 04:11:09,090 | INFO     | **************************************
[2026-01-24 13:12:12] 2026-01-24 04:11:09,090 | INFO     | 
[2026-01-24 13:12:12] 2026-01-24 04:11:09,091 | INFO     | architecture information:
[2026-01-24 13:12:12] 2026-01-24 04:11:09,091 | INFO     | executing command: cat /etc/os-release
[2026-01-24 13:12:12] 2026-01-24 04:11:09,105 | INFO     | cat /etc/os-release:
[2026-01-24 13:12:12] NAME="CentOS Linux"
[2026-01-24 13:12:12] VERSION="7 (Core)"
[2026-01-24 13:12:12] ID="centos"
[2026-01-24 13:12:12] ID_LIKE="rhel fedora"
[2026-01-24 13:12:12] VERSION_ID="7"
[2026-01-24 13:12:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-24 13:12:12] ANSI_COLOR="0;31"
[2026-01-24 13:12:12] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-24 13:12:12] HOME_URL="https://www.centos.org/"
[2026-01-24 13:12:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-24 13:12:12] 
[2026-01-24 13:12:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-24 13:12:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-24 13:12:12] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-24 13:12:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-24 13:12:12] 
[2026-01-24 13:12:12] 2026-01-24 04:11:09,105 | INFO     | **************************************
[2026-01-24 13:12:12] 2026-01-24 04:11:09,608 | INFO     | executing command: df -mP /var/lib/boinc/slots/1
[2026-01-24 13:12:12] 2026-01-24 04:11:09,621 | INFO     | sufficient remaining disk space (95405735936 B)
[2026-01-24 13:12:12] 2026-01-24 04:11:09,621 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-24 13:12:12] 2026-01-24 04:11:09,622 | INFO     | current server update state: UPDATING_FINAL
[2026-01-24 13:12:12] 2026-01-24 04:11:09,622 | INFO     | update_server=False
[2026-01-24 13:12:12] 2026-01-24 04:11:09,622 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-24 13:12:12] 2026-01-24 04:11:09,622 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-24 13:12:12] 2026-01-24 04:11:09,622 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-01-24 13:12:12] 2026-01-24 04:11:09,623 | INFO     | found 0 job(s) in 20 queues
[2026-01-24 13:12:12] 2026-01-24 04:11:09,623 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-24 13:12:12] 2026-01-24 04:11:09,623 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-24 13:12:12] 2026-01-24 04:11:09,714 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-24 13:12:12] 2026-01-24 04:11:09,832 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-24 13:12:12] 2026-01-24 04:11:09,832 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-24 13:12:12] 2026-01-24 04:11:09,832 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-24 13:12:12] 2026-01-24 04:11:09,832 | INFO     | will abort loop
[2026-01-24 13:12:12] 2026-01-24 04:11:09,907 | INFO     | all data control threads have been joined
[2026-01-24 13:12:12] 2026-01-24 04:11:10,404 | INFO     | all payload control threads have been joined
[2026-01-24 13:12:12] 2026-01-24 04:11:10,520 | INFO     | all job control threads have been joined
[2026-01-24 13:12:12] 2026-01-24 04:11:10,627 | INFO     | [job] queue monitor thread has finished
[2026-01-24 13:12:12] 2026-01-24 04:11:10,627 | INFO     | [job] retrieve thread has finished
[2026-01-24 13:12:12] 2026-01-24 04:11:10,746 | INFO     | [payload] failed_post thread has finished
[2026-01-24 13:12:12] 2026-01-24 04:11:10,834 | INFO     | [job] job monitor thread has finished
[2026-01-24 13:12:12] 2026-01-24 04:11:10,913 | INFO     | [data] control thread has finished
[2026-01-24 13:12:12] 2026-01-24 04:11:11,100 | INFO     | [payload] execute_payloads thread has finished
[2026-01-24 13:12:12] 2026-01-24 04:11:11,357 | INFO     | [job] validate thread has finished
[2026-01-24 13:12:12] 2026-01-24 04:11:11,409 | INFO     | [payload] control thread has finished
[2026-01-24 13:12:12] 2026-01-24 04:11:11,525 | INFO     | [job] control thread has finished
[2026-01-24 13:12:12] 2026-01-24 04:11:11,689 | INFO     | [payload] validate_post thread has finished
[2026-01-24 13:12:12] 2026-01-24 04:11:11,716 | INFO     | [data] copytool_out thread has finished
[2026-01-24 13:12:12] 2026-01-24 04:11:11,788 | INFO     | [job] create_data_payload thread has finished
[2026-01-24 13:12:12] 2026-01-24 04:11:11,865 | INFO     | [payload] validate_pre thread has finished
[2026-01-24 13:12:12] 2026-01-24 04:11:11,891 | INFO     | [data] copytool_in thread has finished
[2026-01-24 13:12:12] 2026-01-24 04:11:13,021 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-24 13:12:12] 2026-01-24 04:11:17,026 | INFO     | [data] queue_monitor thread has finished
[2026-01-24 13:12:12] 2026-01-24 04:11:20,495 | INFO     | job.realtimelogging is not enabled
[2026-01-24 13:12:12] 2026-01-24 04:11:21,500 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-24 13:12:12] 2026-01-24 04:12:06,140 | INFO     | [monitor] cgroup control has ended
[2026-01-24 13:12:12] 2026-01-24 04:12:06,757 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140667628967744)>', '<ExcThread(monitor, started 140667258910464)>']
[2026-01-24 13:12:12] 2026-01-24 04:12:06,884 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-24 13:12:12] 2026-01-24 04:12:06,884 | INFO     | [monitor] control thread has ended
[2026-01-24 13:12:12] 2026-01-24 04:12:11,782 | INFO     | all workflow threads have been joined
[2026-01-24 13:12:12] 2026-01-24 04:12:11,782 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-24 13:12:12] 2026-01-24 04:12:11,782 | INFO     | traces error code: 0
[2026-01-24 13:12:12] 2026-01-24 04:12:11,782 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-24 13:12:12] 2026-01-24 04:12:11,893 [wrapper] ==== pilot stdout END ====
[2026-01-24 13:12:12] 2026-01-24 04:12:11,896 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-24 13:12:12] 2026-01-24 04:12:11,898 [wrapper] pilotpid: 1890601
[2026-01-24 13:12:12] 2026-01-24 04:12:11,901 [wrapper] Pilot exit status: 0
[2026-01-24 13:12:12] 2026-01-24 04:12:11,911 [wrapper] pandaids: 6979120997
[2026-01-24 13:12:12] 2026-01-24 04:12:11,939 [wrapper] cleanup supervisor_pilot 1913586 1890602
[2026-01-24 13:12:12] 2026-01-24 04:12:11,942 [wrapper] Test setup, not cleaning
[2026-01-24 13:12:12] 2026-01-24 04:12:11,945 [wrapper] apfmon messages muted
[2026-01-24 13:12:12] 2026-01-24 04:12:11,947 [wrapper] ==== wrapper stdout END ====
[2026-01-24 13:12:12] 2026-01-24 04:12:11,949 [wrapper] ==== wrapper stderr END ====
[2026-01-24 13:12:12]  *** Error codes and diagnostics ***
[2026-01-24 13:12:12]     "exeErrorCode": 0,
[2026-01-24 13:12:12]     "exeErrorDiag": "",
[2026-01-24 13:12:12]     "pilotErrorCode": 0,
[2026-01-24 13:12:12]     "pilotErrorDiag": "",
[2026-01-24 13:12:12]  *** Listing of results directory ***
[2026-01-24 13:12:12] total 685628
[2026-01-24 13:12:12] -rw-r--r--. 1 boinc boinc    584422 Jan 24 00:38 pilot3.tar.gz
[2026-01-24 13:12:12] -rwx------. 1 boinc boinc     36322 Jan 24 00:42 runpilot2-wrapper.sh
[2026-01-24 13:12:12] -rw-r--r--. 1 boinc boinc      5111 Jan 24 00:45 queuedata.json
[2026-01-24 13:12:12] -rw-r--r--. 1 boinc boinc       100 Jan 24 11:18 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-24 13:12:12] -rwxr-xr-x. 1 boinc boinc      7986 Jan 24 11:18 run_atlas
[2026-01-24 13:12:12] -rw-r--r--. 1 boinc boinc       105 Jan 24 11:18 job.xml
[2026-01-24 13:12:12] -rw-r--r--. 1 boinc boinc      9356 Jan 24 11:18 init_data.xml
[2026-01-24 13:12:12] -rw-r--r--. 2 boinc boinc 505349967 Jan 24 11:18 EVNT.48318008._000002.pool.root.1
[2026-01-24 13:12:12] -rw-r--r--. 2 boinc boinc     15845 Jan 24 11:18 start_atlas.sh
[2026-01-24 13:12:12] drwxrwx--x. 2 boinc boinc        68 Jan 24 11:18 shared
[2026-01-24 13:12:12] -rw-r--r--. 2 boinc boinc    597750 Jan 24 11:18 input.tar.gz
[2026-01-24 13:12:12] -rw-r--r--. 1 boinc boinc         0 Jan 24 11:18 boinc_lockfile
[2026-01-24 13:12:12] -rw-r--r--. 1 boinc boinc      2519 Jan 24 11:18 pandaJob.out
[2026-01-24 13:12:12] -rw-------. 1 boinc boinc   1004238 Jan 24 11:19 agis_schedconf.cvmfs.json
[2026-01-24 13:12:12] -rw-------. 1 boinc boinc   1516246 Jan 24 11:19 agis_ddmendpoints.agis.ALL.json
[2026-01-24 13:12:12] -rw-------. 1 boinc boinc       418 Jan 24 11:19 workernode_map.json
[2026-01-24 13:12:12] drwx------. 5 boinc boinc      4096 Jan 24 11:19 pilot3
[2026-01-24 13:12:12] -rw-------. 1 boinc boinc 190197427 Jan 24 13:10 HITS.48318010._000069.pool.root.1
[2026-01-24 13:12:12] -rw-r--r--. 1 boinc boinc       530 Jan 24 13:10 boinc_task_state.xml
[2026-01-24 13:12:12] -rw-------. 1 boinc boinc      1025 Jan 24 13:10 memory_monitor_summary.json
[2026-01-24 13:12:12] -rw-------. 1 boinc boinc        95 Jan 24 13:11 pilot_heartbeat.json
[2026-01-24 13:12:12] -rw-------. 1 boinc boinc    329699 Jan 24 13:11 log.48318010._000069.job.log.tgz.1
[2026-01-24 13:12:12] -rw-------. 1 boinc boinc      6281 Jan 24 13:11 heartbeat.json
[2026-01-24 13:12:12] -rw-r--r--. 1 boinc boinc      8192 Jan 24 13:11 boinc_mmap_file
[2026-01-24 13:12:12] -rw-r--r--. 1 boinc boinc        27 Jan 24 13:11 wrapper_checkpoint.txt
[2026-01-24 13:12:12] -rw-------. 1 boinc boinc      4806 Jan 24 13:12 pilotlog.txt
[2026-01-24 13:12:12] -rw-------. 1 boinc boinc    970115 Jan 24 13:12 log.48318010._000069.job.log.1
[2026-01-24 13:12:12] -rw-------. 1 boinc boinc       357 Jan 24 13:12 output.list
[2026-01-24 13:12:12] -rw-r--r--. 1 boinc boinc       620 Jan 24 13:12 runtime_log
[2026-01-24 13:12:12] -rw-------. 1 boinc boinc   1320960 Jan 24 13:12 result.tar.gz
[2026-01-24 13:12:12] -rw-r--r--. 1 boinc boinc      8774 Jan 24 13:12 runtime_log.err
[2026-01-24 13:12:12] -rw-------. 1 boinc boinc       643 Jan 24 13:12 2DjMDmtTY38n9Rq4apOajLDm4fhM0noT9bVo0NGKDmxVwKDm8YAPFo.diag
[2026-01-24 13:12:12] -rw-r--r--. 1 boinc boinc     20814 Jan 24 13:12 stderr.txt
[2026-01-24 13:12:12] HITS file was successfully produced:
[2026-01-24 13:12:12] -rw-------. 1 boinc boinc 190197427 Jan 24 13:10 shared/HITS.pool.root.1
[2026-01-24 13:12:12]  *** Contents of shared directory: ***
[2026-01-24 13:12:12] total 681144
[2026-01-24 13:12:12] -rw-r--r--. 2 boinc boinc 505349967 Jan 24 11:18 ATLAS.root_0
[2026-01-24 13:12:12] -rw-r--r--. 2 boinc boinc     15845 Jan 24 11:18 start_atlas.sh
[2026-01-24 13:12:12] -rw-r--r--. 2 boinc boinc    597750 Jan 24 11:18 input.tar.gz
[2026-01-24 13:12:12] -rw-------. 1 boinc boinc 190197427 Jan 24 13:10 HITS.pool.root.1
[2026-01-24 13:12:12] -rw-------. 1 boinc boinc   1320960 Jan 24 13:12 result.tar.gz
13:12:13 (1886443): run_atlas exited; CPU time 37051.644555
13:12:13 (1886443): called boinc_finish(0)

</stderr_txt>
]]>

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