Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
08:53:29 (23771): wrapper (7.7.26015): starting
08:53:29 (23771): wrapper: running run_atlas (--nthreads 8)
[2026-01-24 08:53:29] Arguments: --nthreads 8
[2026-01-24 08:53:29] Threads: 8
[2026-01-24 08:53:29] Checking for CVMFS
[2026-01-24 08:53:29] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-24 08:53:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-24 08:53:31] Running cvmfs_config stat atlas.cern.ch
[2026-01-24 08:53:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-24 08:53:31] 2.11.2.0 14173 56739 132660 155465 1 205 21348442 25165825 3708 130560 0 20400340 99.789 15612636 3584 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-24 08:53:31] CVMFS is ok
[2026-01-24 08:53:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-24 08:53:31] Checking for apptainer binary...
[2026-01-24 08:53:31] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-24 08:53:31] Running /usr/bin/apptainer --version
[2026-01-24 08:53:31] apptainer version 1.3.2-1.el7
[2026-01-24 08:53:31] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-24 08:53:32] cg-vwn375.simple-grid.lan
[2026-01-24 08:53:32] apptainer works
[2026-01-24 08:53:32] Set ATHENA_PROC_NUMBER=8
[2026-01-24 08:53:32] Set ATHENA_CORE_NUMBER=8
[2026-01-24 08:53:33] Starting ATLAS job with PandaID=6979648903
[2026-01-24 08:53:33] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/9 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-24 13:21:47]  *** The last 200 lines of the pilot log: ***
[2026-01-24 13:21:47] 2026-01-24 12:21:03,443 | INFO     | total number of processed events: 400 (read)
[2026-01-24 13:21:47] 2026-01-24 12:21:03,445 | INFO     | using path: /var/lib/boinc/slots/9/PanDA_Pilot-6979648903/memory_monitor_summary.json (trf name=prmon)
[2026-01-24 13:21:47] 2026-01-24 12:21:03,446 | INFO     | extracted standard info from prmon json
[2026-01-24 13:21:47] 2026-01-24 12:21:03,446 | INFO     | extracted standard memory fields from prmon json
[2026-01-24 13:21:47] 2026-01-24 12:21:03,446 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-24 13:21:47] 2026-01-24 12:21:03,446 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-24 13:21:47] 2026-01-24 12:21:03,446 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-24 13:21:47] 2026-01-24 12:21:03,452 | INFO     | fitting pss+swap vs Time
[2026-01-24 13:21:47] 2026-01-24 12:21:03,453 | INFO     | sum of square deviations: 5576683165.5
[2026-01-24 13:21:47] 2026-01-24 12:21:03,456 | INFO     | sum of deviations: 9082771259.500011
[2026-01-24 13:21:47] 2026-01-24 12:21:03,456 | INFO     | mean x: 1769249237.5
[2026-01-24 13:21:47] 2026-01-24 12:21:03,456 | INFO     | mean y: 2494567.675572519
[2026-01-24 13:21:47] 2026-01-24 12:21:03,456 | INFO     | intersect: -2879090354.464525
[2026-01-24 13:21:47] 2026-01-24 12:21:03,457 | INFO     | chi2: 2.329996530000944
[2026-01-24 13:21:47] 2026-01-24 12:21:03,457 | INFO     | sum of square deviations: 5263458688.0
[2026-01-24 13:21:47] 2026-01-24 12:21:03,463 | INFO     | sum of deviations: 26535198494.0
[2026-01-24 13:21:47] 2026-01-24 12:21:03,463 | INFO     | mean x: 1769249085.0
[2026-01-24 13:21:47] 2026-01-24 12:21:03,463 | INFO     | mean y: 2502932.3891050583
[2026-01-24 13:21:47] 2026-01-24 12:21:03,464 | INFO     | intersect: -8916988686.845367
[2026-01-24 13:21:47] 2026-01-24 12:21:03,464 | INFO     | chi2: 1.5382909180692783
[2026-01-24 13:21:47] 2026-01-24 12:21:03,464 | INFO     | current chi2=1.5382909180692783 (change=33.978832231623315 %)
[2026-01-24 13:21:47] 2026-01-24 12:21:03,465 | INFO     | sum of square deviations: 4962187923.0
[2026-01-24 13:21:47] 2026-01-24 12:21:03,467 | INFO     | sum of deviations: 25940833403.99999
[2026-01-24 13:21:47] 2026-01-24 12:21:03,467 | INFO     | mean x: 1769248932.5
[2026-01-24 13:21:47] 2026-01-24 12:21:03,468 | INFO     | mean y: 2502631.507936508
[2026-01-24 13:21:47] 2026-01-24 12:21:03,468 | INFO     | intersect: -9246601296.107931
[2026-01-24 13:21:47] 2026-01-24 12:21:03,468 | INFO     | chi2: 1.5389607630386732
[2026-01-24 13:21:47] 2026-01-24 12:21:03,468 | INFO     | current chi2=1.5389607630386732 (change=-0.04354475226543339 %)
[2026-01-24 13:21:47] 2026-01-24 12:21:03,468 | INFO     | right removable region: 251
[2026-01-24 13:21:47] 2026-01-24 12:21:03,469 | INFO     | sum of square deviations: 5263458688.0
[2026-01-24 13:21:47] 2026-01-24 12:21:03,471 | INFO     | sum of deviations: -29862742333.0
[2026-01-24 13:21:47] 2026-01-24 12:21:03,477 | INFO     | mean x: 1769249390.0
[2026-01-24 13:21:47] 2026-01-24 12:21:03,477 | INFO     | mean y: 2513357.587548638
[2026-01-24 13:21:47] 2026-01-24 12:21:03,477 | INFO     | intersect: 10040521022.93572
[2026-01-24 13:21:47] 2026-01-24 12:21:03,478 | INFO     | chi2: 0.9236977568860556
[2026-01-24 13:21:47] 2026-01-24 12:21:03,478 | INFO     | current chi2=0.9236977568860556 (change=60.35626040671909 %)
[2026-01-24 13:21:47] 2026-01-24 12:21:03,478 | INFO     | sum of square deviations: 4962187923.0
[2026-01-24 13:21:47] 2026-01-24 12:21:03,481 | INFO     | sum of deviations: -24766707844.0
[2026-01-24 13:21:47] 2026-01-24 12:21:03,481 | INFO     | mean x: 1769249542.5
[2026-01-24 13:21:47] 2026-01-24 12:21:03,481 | INFO     | mean y: 2510757.0714285714
[2026-01-24 13:21:47] 2026-01-24 12:21:03,481 | INFO     | intersect: 8832987797.073719
[2026-01-24 13:21:47] 2026-01-24 12:21:03,482 | INFO     | chi2: 0.9053513625517153
[2026-01-24 13:21:47] 2026-01-24 12:21:03,482 | INFO     | current chi2=0.9053513625517153 (change=1.9861902010230192 %)
[2026-01-24 13:21:47] 2026-01-24 12:21:03,482 | INFO     | left removable region: 20
[2026-01-24 13:21:47] 2026-01-24 12:21:03,482 | INFO     | sum of square deviations: 3822136780.0
[2026-01-24 13:21:47] 2026-01-24 12:21:03,484 | INFO     | sum of deviations: 10138322915.000002
[2026-01-24 13:21:47] 2026-01-24 12:21:03,484 | INFO     | mean x: 1769249512.0
[2026-01-24 13:21:47] 2026-01-24 12:21:03,485 | INFO     | mean y: 2509566.4632034632
[2026-01-24 13:21:47] 2026-01-24 12:21:03,485 | INFO     | intersect: -4690473417.22326
[2026-01-24 13:21:47] 2026-01-24 12:21:03,485 | INFO     | chi2: 0.0017097665329836478
[2026-01-24 13:21:47] 2026-01-24 12:21:03,485 | INFO     | current memory leak: 2.65 B/s (using 231 data points, chi2=0.00)
[2026-01-24 13:21:47] 2026-01-24 12:21:03,486 | INFO     | could have reported an average CPU frequency of 1999 MHz (12 samples)
[2026-01-24 13:21:47] 2026-01-24 12:21:03,486 | INFO     | ..............................
[2026-01-24 13:21:47] 2026-01-24 12:21:03,486 | INFO     | . Timing measurements:
[2026-01-24 13:21:47] 2026-01-24 12:21:03,487 | INFO     | . get job = 0 s
[2026-01-24 13:21:47] 2026-01-24 12:21:03,487 | INFO     | . initial setup = 15 s
[2026-01-24 13:21:47] 2026-01-24 12:21:03,487 | INFO     | . payload setup = 11 s
[2026-01-24 13:21:47] 2026-01-24 12:21:03,487 | INFO     | . stage-in = 0 s
[2026-01-24 13:21:47] 2026-01-24 12:21:03,487 | INFO     | . payload execution = 15987 s
[2026-01-24 13:21:47] 2026-01-24 12:21:03,487 | INFO     | . stage-out = 4 s
[2026-01-24 13:21:47] 2026-01-24 12:21:03,487 | INFO     | . log creation = 1 s
[2026-01-24 13:21:47] 2026-01-24 12:21:03,487 | INFO     | ..............................
[2026-01-24 13:21:47] 2026-01-24 12:21:03,645 | INFO     | time since job start (16014s) is within the limit (349056.0s)
[2026-01-24 13:21:47] 2026-01-24 12:21:03,645 | INFO     | 16029s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2026-01-24 13:21:47] 2026-01-24 12:21:03,837 | INFO     | 
[2026-01-24 13:21:47] 2026-01-24 12:21:03,837 | INFO     | job summary report
[2026-01-24 13:21:47] 2026-01-24 12:21:03,837 | INFO     | --------------------------------------------------
[2026-01-24 13:21:47] 2026-01-24 12:21:03,837 | INFO     | PanDA job id: 6979648903
[2026-01-24 13:21:47] 2026-01-24 12:21:03,837 | INFO     | task id: 48318042
[2026-01-24 13:21:47] 2026-01-24 12:21:03,837 | INFO     | errors: (none)
[2026-01-24 13:21:47] 2026-01-24 12:21:03,837 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-24 13:21:47] 2026-01-24 12:21:03,838 | INFO     | pilot state: finished 
[2026-01-24 13:21:47] 2026-01-24 12:21:03,838 | INFO     | transexitcode: 0
[2026-01-24 13:21:47] 2026-01-24 12:21:03,838 | INFO     | exeerrorcode: 0
[2026-01-24 13:21:47] 2026-01-24 12:21:03,838 | INFO     | exeerrordiag: 
[2026-01-24 13:21:47] 2026-01-24 12:21:03,838 | INFO     | exitcode: 0
[2026-01-24 13:21:47] 2026-01-24 12:21:03,838 | INFO     | exitmsg: OK
[2026-01-24 13:21:47] 2026-01-24 12:21:03,838 | INFO     | cpuconsumptiontime: 62404 s
[2026-01-24 13:21:47] 2026-01-24 12:21:03,838 | INFO     | nevents: 400
[2026-01-24 13:21:47] 2026-01-24 12:21:03,838 | INFO     | neventsw: 0
[2026-01-24 13:21:47] 2026-01-24 12:21:03,838 | INFO     | pid: 32196
[2026-01-24 13:21:47] 2026-01-24 12:21:03,839 | INFO     | pgrp: 32196
[2026-01-24 13:21:47] 2026-01-24 12:21:03,839 | INFO     | corecount: 8
[2026-01-24 13:21:47] 2026-01-24 12:21:03,839 | INFO     | event service: False
[2026-01-24 13:21:47] 2026-01-24 12:21:03,839 | INFO     | sizes: {0: 2283809, 1: 2284270, 16002: 2315487, 16007: 2324485, 16010: 2324541, 16012: 2324735}
[2026-01-24 13:21:47] 2026-01-24 12:21:03,839 | INFO     | --------------------------------------------------
[2026-01-24 13:21:47] 2026-01-24 12:21:03,839 | INFO     | 
[2026-01-24 13:21:47] 2026-01-24 12:21:03,839 | INFO     | executing command: ls -lF /var/lib/boinc/slots/9
[2026-01-24 13:21:47] 2026-01-24 12:21:04,272 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-24 13:21:47] 2026-01-24 12:21:04,273 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-24 13:21:47] 2026-01-24 12:21:04,273 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-24 13:21:47] 2026-01-24 12:21:04,273 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-24 13:21:47] 2026-01-24 12:21:04,273 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-24 13:21:47] 2026-01-24 12:21:04,273 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-24 13:21:47] 2026-01-24 12:21:04,273 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-24 13:21:47] 2026-01-24 12:21:04,274 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-24 13:21:47] 2026-01-24 12:21:04,274 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-24 13:21:47] 2026-01-24 12:21:04,274 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-24 13:21:47] 2026-01-24 12:21:04,274 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-24 13:21:47] 2026-01-24 12:21:04,274 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-24 13:21:47] 2026-01-24 12:21:04,274 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-24 13:21:47] 2026-01-24 12:21:04,274 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-24 13:21:47] 2026-01-24 12:21:04,274 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-24 13:21:47] 2026-01-24 12:21:04,274 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-24 13:21:47] 2026-01-24 12:21:04,274 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-24 13:21:47] 2026-01-24 12:21:04,275 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-24 13:21:47] 2026-01-24 12:21:04,275 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-24 13:21:47] 2026-01-24 12:21:04,275 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-24 13:21:47] 2026-01-24 12:21:04,275 | INFO     | job 6979648903 has completed (purged errors)
[2026-01-24 13:21:47] 2026-01-24 12:21:04,275 | INFO     | overall cleanup function is called
[2026-01-24 13:21:47] 2026-01-24 12:21:05,284 | INFO     | --- collectZombieJob: --- 10, [32196]
[2026-01-24 13:21:47] 2026-01-24 12:21:05,284 | INFO     | zombie collector waiting for pid 32196
[2026-01-24 13:21:47] 2026-01-24 12:21:05,284 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-24 13:21:47] 2026-01-24 12:21:05,284 | INFO     | collected zombie processes
[2026-01-24 13:21:47] 2026-01-24 12:21:05,284 | INFO     | will attempt to kill all subprocesses of pid=32196
[2026-01-24 13:21:47] 2026-01-24 12:21:05,401 | INFO     | process IDs to be killed: [32196] (in reverse order)
[2026-01-24 13:21:47] 2026-01-24 12:21:05,994 | WARNING  | found no corresponding commands to process id(s)
[2026-01-24 13:21:47] 2026-01-24 12:21:05,995 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-24 13:21:47] 2026-01-24 12:21:05,998 | INFO     | did not find any defunct processes belonging to 32196
[2026-01-24 13:21:47] 2026-01-24 12:21:06,006 | INFO     | did not find any defunct processes belonging to 32196
[2026-01-24 13:21:47] 2026-01-24 12:21:06,006 | INFO     | ready for new job
[2026-01-24 13:21:47] 2026-01-24 12:21:06,006 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-24 13:21:47] 2026-01-24 12:21:06,008 | INFO     | **************************************
[2026-01-24 13:21:47] 2026-01-24 12:21:06,009 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-24 13:21:47] 2026-01-24 12:21:06,009 | INFO     | **************************************
[2026-01-24 13:21:47] 2026-01-24 12:21:06,009 | INFO     | 
[2026-01-24 13:21:47] 2026-01-24 12:21:06,010 | INFO     | pilot is running in a VM
[2026-01-24 13:21:47] 2026-01-24 12:21:06,010 | INFO     | architecture information:
[2026-01-24 13:21:47] 2026-01-24 12:21:06,010 | INFO     | executing command: cat /etc/os-release
[2026-01-24 13:21:47] 2026-01-24 12:21:06,221 | INFO     | cat /etc/os-release:
[2026-01-24 13:21:47] NAME="CentOS Linux"
[2026-01-24 13:21:47] VERSION="7 (Core)"
[2026-01-24 13:21:47] ID="centos"
[2026-01-24 13:21:47] ID_LIKE="rhel fedora"
[2026-01-24 13:21:47] VERSION_ID="7"
[2026-01-24 13:21:47] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-24 13:21:47] ANSI_COLOR="0;31"
[2026-01-24 13:21:47] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-24 13:21:47] HOME_URL="https://www.centos.org/"
[2026-01-24 13:21:47] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-24 13:21:47] 
[2026-01-24 13:21:47] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-24 13:21:47] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-24 13:21:47] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-24 13:21:47] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-24 13:21:47] 
[2026-01-24 13:21:47] 2026-01-24 12:21:06,222 | INFO     | **************************************
[2026-01-24 13:21:47] 2026-01-24 12:21:06,725 | INFO     | executing command: df -mP /var/lib/boinc/slots/9
[2026-01-24 13:21:47] 2026-01-24 12:21:06,904 | INFO     | sufficient remaining disk space (495694381056 B)
[2026-01-24 13:21:47] 2026-01-24 12:21:06,904 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-24 13:21:47] 2026-01-24 12:21:06,904 | INFO     | current server update state: UPDATING_FINAL
[2026-01-24 13:21:47] 2026-01-24 12:21:06,904 | INFO     | update_server=False
[2026-01-24 13:21:47] 2026-01-24 12:21:06,904 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-24 13:21:47] 2026-01-24 12:21:06,907 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-24 13:21:47] 2026-01-24 12:21:07,064 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-24 13:21:47] 2026-01-24 12:21:07,126 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-24 13:21:47] 2026-01-24 12:21:07,126 | INFO     | aborting loop
[2026-01-24 13:21:47] 2026-01-24 12:21:07,806 | INFO     | all job control threads have been joined
[2026-01-24 13:21:47] 2026-01-24 12:21:07,911 | INFO     | [job] retrieve thread has finished
[2026-01-24 13:21:47] 2026-01-24 12:21:07,928 | INFO     | all data control threads have been joined
[2026-01-24 13:21:47] 2026-01-24 12:21:07,991 | INFO     | [payload] execute_payloads thread has finished
[2026-01-24 13:21:47] 2026-01-24 12:21:08,132 | INFO     | [job] job monitor thread has finished
[2026-01-24 13:21:47] 2026-01-24 12:21:08,300 | INFO     | all payload control threads have been joined
[2026-01-24 13:21:47] 2026-01-24 12:21:08,305 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-24 13:21:47] 2026-01-24 12:21:08,414 | INFO     | [payload] validate_pre thread has finished
[2026-01-24 13:21:47] 2026-01-24 12:21:08,657 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-24 13:21:47] 2026-01-24 12:21:08,813 | INFO     | [job] control thread has finished
[2026-01-24 13:21:47] 2026-01-24 12:21:08,898 | INFO     | [payload] failed_post thread has finished
[2026-01-24 13:21:47] 2026-01-24 12:21:08,916 | INFO     | [data] copytool_out thread has finished
[2026-01-24 13:21:47] 2026-01-24 12:21:08,934 | INFO     | [data] control thread has finished
[2026-01-24 13:21:47] 2026-01-24 12:21:09,028 | INFO     | [payload] validate_post thread has finished
[2026-01-24 13:21:47] 2026-01-24 12:21:09,062 | INFO     | [job] create_data_payload thread has finished
[2026-01-24 13:21:47] 2026-01-24 12:21:09,105 | INFO     | [job] validate thread has finished
[2026-01-24 13:21:47] 2026-01-24 12:21:09,254 | INFO     | [data] copytool_in thread has finished
[2026-01-24 13:21:47] 2026-01-24 12:21:09,306 | INFO     | [payload] control thread has finished
[2026-01-24 13:21:47] 2026-01-24 12:21:09,663 | INFO     | [job] queue monitor thread has finished
[2026-01-24 13:21:47] 2026-01-24 12:21:11,073 | INFO     | [data] queue_monitor thread has finished
[2026-01-24 13:21:47] 2026-01-24 12:21:36,854 | INFO     | PID=27727 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-24 13:21:47] 2026-01-24 12:21:36,855 | INFO     | .. there are 9 such processes running
[2026-01-24 13:21:47] 2026-01-24 12:21:36,856 | INFO     | found 0 job(s) in 20 queues
[2026-01-24 13:21:47] 2026-01-24 12:21:36,856 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-24 13:21:47] 2026-01-24 12:21:36,856 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-24 13:21:47] 2026-01-24 12:21:37,034 | INFO     | [monitor] cgroup control has ended
[2026-01-24 13:21:47] 2026-01-24 12:21:37,878 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139683220633408)>', '<ExcThread(monitor, started 139682788660992)>']
[2026-01-24 13:21:47] 2026-01-24 12:21:38,869 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-24 13:21:47] 2026-01-24 12:21:38,869 | INFO     | [monitor] control thread has ended
[2026-01-24 13:21:47] 2026-01-24 12:21:42,904 | INFO     | all workflow threads have been joined
[2026-01-24 13:21:47] 2026-01-24 12:21:42,904 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-24 13:21:47] 2026-01-24 12:21:42,904 | INFO     | traces error code: 0
[2026-01-24 13:21:47] 2026-01-24 12:21:42,904 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-24 13:21:47] 2026-01-24 12:21:43,295 [wrapper] ==== pilot stdout END ====
[2026-01-24 13:21:47] 2026-01-24 12:21:43,400 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-24 13:21:47] 2026-01-24 12:21:43,512 [wrapper] pilotpid: 27727
[2026-01-24 13:21:47] 2026-01-24 12:21:43,575 [wrapper] Pilot exit status: 0
[2026-01-24 13:21:47] 2026-01-24 12:21:44,092 [wrapper] pandaids: 6979648903
[2026-01-24 13:21:47] 2026-01-24 12:21:45,137 [wrapper] cleanup supervisor_pilot 24068 27728
[2026-01-24 13:21:47] 2026-01-24 12:21:45,234 [wrapper] Test setup, not cleaning
[2026-01-24 13:21:47] 2026-01-24 12:21:45,330 [wrapper] apfmon messages muted
[2026-01-24 13:21:47] 2026-01-24 12:21:45,399 [wrapper] ==== wrapper stdout END ====
[2026-01-24 13:21:47] 2026-01-24 12:21:45,472 [wrapper] ==== wrapper stderr END ====
[2026-01-24 13:21:47]  *** Error codes and diagnostics ***
[2026-01-24 13:21:47]     "exeErrorCode": 0,
[2026-01-24 13:21:47]     "exeErrorDiag": "",
[2026-01-24 13:21:47]     "pilotErrorCode": 0,
[2026-01-24 13:21:47]     "pilotErrorDiag": "",
[2026-01-24 13:21:47]  *** Listing of results directory ***
[2026-01-24 13:21:47] total 677604
[2026-01-24 13:21:47] -rw-r--r--. 1 boinc boinc    584422 Jan 23 20:36 pilot3.tar.gz
[2026-01-24 13:21:47] -rwx------. 1 boinc boinc     36322 Jan 23 20:36 runpilot2-wrapper.sh
[2026-01-24 13:21:47] -rw-r--r--. 1 boinc boinc      5111 Jan 23 20:37 queuedata.json
[2026-01-24 13:21:47] -rw-r--r--. 1 boinc boinc       100 Jan 24 08:53 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-24 13:21:47] -rwxr-xr-x. 1 boinc boinc      7986 Jan 24 08:53 run_atlas
[2026-01-24 13:21:47] -rw-r--r--. 1 boinc boinc       105 Jan 24 08:53 job.xml
[2026-01-24 13:21:47] -rw-r--r--. 2 boinc boinc 499900478 Jan 24 08:53 EVNT.48318040._000006.pool.root.1
[2026-01-24 13:21:47] -rw-r--r--. 2 boinc boinc    597755 Jan 24 08:53 input.tar.gz
[2026-01-24 13:21:47] -rw-r--r--. 1 boinc boinc      6390 Jan 24 08:53 init_data.xml
[2026-01-24 13:21:47] -rw-r--r--. 2 boinc boinc     15845 Jan 24 08:53 start_atlas.sh
[2026-01-24 13:21:47] drwxrwx--x. 2 boinc boinc        68 Jan 24 08:53 shared
[2026-01-24 13:21:47] -rw-r--r--. 1 boinc boinc         0 Jan 24 08:53 boinc_lockfile
[2026-01-24 13:21:47] -rw-r--r--. 1 boinc boinc      2527 Jan 24 08:53 pandaJob.out
[2026-01-24 13:21:47] -rw-------. 1 boinc boinc   1004238 Jan 24 08:53 agis_schedconf.cvmfs.json
[2026-01-24 13:21:47] -rw-------. 1 boinc boinc       415 Jan 24 08:54 workernode_map.json
[2026-01-24 13:21:47] drwx------. 5 boinc boinc      4096 Jan 24 08:54 pilot3
[2026-01-24 13:21:47] -rw-------. 1 boinc boinc 184650866 Jan 24 13:19 HITS.48318042._000256.pool.root.1
[2026-01-24 13:21:47] -rw-r--r--. 1 boinc boinc       531 Jan 24 13:20 boinc_task_state.xml
[2026-01-24 13:21:47] -rw-------. 1 boinc boinc      1016 Jan 24 13:20 memory_monitor_summary.json
[2026-01-24 13:21:47] -rw-------. 1 boinc boinc   1516246 Jan 24 13:20 agis_ddmendpoints.agis.ALL.json
[2026-01-24 13:21:47] -rw-------. 1 boinc boinc    474425 Jan 24 13:20 log.48318042._000256.job.log.tgz.1
[2026-01-24 13:21:47] -rw-------. 1 boinc boinc      6314 Jan 24 13:21 heartbeat.json
[2026-01-24 13:21:47] -rw-------. 1 boinc boinc        95 Jan 24 13:21 pilot_heartbeat.json
[2026-01-24 13:21:47] -rw-r--r--. 1 boinc boinc      8192 Jan 24 13:21 boinc_mmap_file
[2026-01-24 13:21:47] -rw-r--r--. 1 boinc boinc        28 Jan 24 13:21 wrapper_checkpoint.txt
[2026-01-24 13:21:47] -rw-------. 1 boinc boinc      4880 Jan 24 13:21 pilotlog.txt
[2026-01-24 13:21:47] -rw-------. 1 boinc boinc   2219931 Jan 24 13:21 log.48318042._000256.job.log.1
[2026-01-24 13:21:47] -rw-------. 1 boinc boinc       357 Jan 24 13:21 output.list
[2026-01-24 13:21:47] -rw-r--r--. 1 boinc boinc       620 Jan 24 13:21 runtime_log
[2026-01-24 13:21:47] -rw-------. 1 boinc boinc   2713600 Jan 24 13:21 result.tar.gz
[2026-01-24 13:21:47] -rw-r--r--. 1 boinc boinc      8816 Jan 24 13:21 runtime_log.err
[2026-01-24 13:21:47] -rw-------. 1 boinc boinc       655 Jan 24 13:21 dUpNDmP8b38nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmlO3KDm2fjA7m.diag
[2026-01-24 13:21:47] -rw-r--r--. 1 boinc boinc     20726 Jan 24 13:21 stderr.txt
[2026-01-24 13:21:47] HITS file was successfully produced:
[2026-01-24 13:21:47] -rw-------. 1 boinc boinc 184650866 Jan 24 13:19 shared/HITS.pool.root.1
[2026-01-24 13:21:47]  *** Contents of shared directory: ***
[2026-01-24 13:21:47] total 671764
[2026-01-24 13:21:47] -rw-r--r--. 2 boinc boinc 499900478 Jan 24 08:53 ATLAS.root_0
[2026-01-24 13:21:47] -rw-r--r--. 2 boinc boinc    597755 Jan 24 08:53 input.tar.gz
[2026-01-24 13:21:47] -rw-r--r--. 2 boinc boinc     15845 Jan 24 08:53 start_atlas.sh
[2026-01-24 13:21:47] -rw-------. 1 boinc boinc 184650866 Jan 24 13:19 HITS.pool.root.1
[2026-01-24 13:21:47] -rw-------. 1 boinc boinc   2713600 Jan 24 13:21 result.tar.gz
13:21:49 (23771): run_atlas exited; CPU time 62641.756437
13:21:49 (23771): called boinc_finish(0)

</stderr_txt>
]]>

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