Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
08:50:15 (2474): wrapper (7.7.26015): starting
08:50:15 (2474): wrapper: running run_atlas (--nthreads 8)
[2026-01-24 08:50:15] Arguments: --nthreads 8
[2026-01-24 08:50:15] Threads: 8
[2026-01-24 08:50:15] Checking for CVMFS
[2026-01-24 08:50:16] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-24 08:50:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-24 08:50:17] Running cvmfs_config stat atlas.cern.ch
[2026-01-24 08:50:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-24 08:50:19] 2.11.2.0 5913 56719 128492 155465 2 53 16660571 25165824 899 130560 0 20828402 99.796 16253269 2613 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2026-01-24 08:50:19] CVMFS is ok
[2026-01-24 08:50:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-24 08:50:19] Checking for apptainer binary...
[2026-01-24 08:50:19] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-24 08:50:19] Running /usr/bin/apptainer --version
[2026-01-24 08:50:19] apptainer version 1.3.2-1.el7
[2026-01-24 08:50:19] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-24 08:50:33] cg-vwn443.simple-grid.lan
[2026-01-24 08:50:33] apptainer works
[2026-01-24 08:50:33] Set ATHENA_PROC_NUMBER=8
[2026-01-24 08:50:33] Set ATHENA_CORE_NUMBER=8
[2026-01-24 08:50:33] Starting ATLAS job with PandaID=6978942371
[2026-01-24 08:50:33] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-24 14:05:36]  *** The last 200 lines of the pilot log: ***
[2026-01-24 14:05:36] 2026-01-24 13:04:41,789 | INFO     | total number of processed events: 400 (read)
[2026-01-24 14:05:36] 2026-01-24 13:04:41,791 | INFO     | using path: /var/lib/boinc/slots/2/PanDA_Pilot-6978942371/memory_monitor_summary.json (trf name=prmon)
[2026-01-24 14:05:36] 2026-01-24 13:04:41,792 | INFO     | extracted standard info from prmon json
[2026-01-24 14:05:36] 2026-01-24 13:04:41,792 | INFO     | extracted standard memory fields from prmon json
[2026-01-24 14:05:36] 2026-01-24 13:04:41,792 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-24 14:05:36] 2026-01-24 13:04:41,792 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-24 14:05:36] 2026-01-24 13:04:41,792 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-24 14:05:36] 2026-01-24 13:04:41,799 | INFO     | fitting pss+swap vs Time
[2026-01-24 14:05:36] 2026-01-24 13:04:41,799 | INFO     | sum of square deviations: 8288713550.0
[2026-01-24 14:05:36] 2026-01-24 13:04:41,803 | INFO     | sum of deviations: 127101365644.99994
[2026-01-24 14:05:36] 2026-01-24 13:04:41,803 | INFO     | mean x: 1769250780.0
[2026-01-24 14:05:36] 2026-01-24 13:04:41,803 | INFO     | mean y: 2433886.133779264
[2026-01-24 14:05:36] 2026-01-24 13:04:41,804 | INFO     | intersect: -27127734016.276283
[2026-01-24 14:05:36] 2026-01-24 13:04:41,804 | INFO     | chi2: 7.936897486719863
[2026-01-24 14:05:36] 2026-01-24 13:04:41,809 | INFO     | sum of square deviations: 7879803557.5
[2026-01-24 14:05:36] 2026-01-24 13:04:41,813 | INFO     | sum of deviations: 164935203220.50003
[2026-01-24 14:05:36] 2026-01-24 13:04:41,813 | INFO     | mean x: 1769250627.5
[2026-01-24 14:05:36] 2026-01-24 13:04:41,813 | INFO     | mean y: 2447843.56122449
[2026-01-24 14:05:36] 2026-01-24 13:04:41,813 | INFO     | intersect: -37030418479.2246
[2026-01-24 14:05:36] 2026-01-24 13:04:41,814 | INFO     | chi2: 6.4035891511795935
[2026-01-24 14:05:36] 2026-01-24 13:04:41,814 | INFO     | current chi2=6.4035891511795935 (change=19.318736799937557 %)
[2026-01-24 14:05:36] 2026-01-24 13:04:41,814 | INFO     | right removable region: 293
[2026-01-24 14:05:36] 2026-01-24 13:04:41,815 | INFO     | sum of square deviations: 7879803557.5
[2026-01-24 14:05:36] 2026-01-24 13:04:41,818 | INFO     | sum of deviations: 24464338743.49999
[2026-01-24 14:05:36] 2026-01-24 13:04:41,818 | INFO     | mean x: 1769250932.5
[2026-01-24 14:05:36] 2026-01-24 13:04:41,818 | INFO     | mean y: 2472139.6156462585
[2026-01-24 14:05:36] 2026-01-24 13:04:41,818 | INFO     | intersect: -5490501615.261267
[2026-01-24 14:05:36] 2026-01-24 13:04:41,819 | INFO     | chi2: 3.307059679899449
[2026-01-24 14:05:36] 2026-01-24 13:04:41,819 | INFO     | current chi2=3.307059679899449 (change=58.3330931836669 %)
[2026-01-24 14:05:36] 2026-01-24 13:04:41,820 | INFO     | sum of square deviations: 7484568240.0
[2026-01-24 14:05:36] 2026-01-24 13:04:41,823 | INFO     | sum of deviations: -31792487032.000004
[2026-01-24 14:05:36] 2026-01-24 13:04:41,823 | INFO     | mean x: 1769251085.0
[2026-01-24 14:05:36] 2026-01-24 13:04:41,823 | INFO     | mean y: 2493751.698961938
[2026-01-24 14:05:36] 2026-01-24 13:04:41,823 | INFO     | intersect: 7517809314.673165
[2026-01-24 14:05:36] 2026-01-24 13:04:41,824 | INFO     | chi2: 1.7192037706930767
[2026-01-24 14:05:36] 2026-01-24 13:04:41,824 | INFO     | current chi2=1.7192037706930767 (change=48.014129253774186 %)
[2026-01-24 14:05:36] 2026-01-24 13:04:41,824 | INFO     | sum of square deviations: 7102775035.0
[2026-01-24 14:05:36] 2026-01-24 13:04:41,827 | INFO     | sum of deviations: -41490052159.5
[2026-01-24 14:05:36] 2026-01-24 13:04:41,834 | INFO     | mean x: 1769251237.5
[2026-01-24 14:05:36] 2026-01-24 13:04:41,834 | INFO     | mean y: 2497620.4471830986
[2026-01-24 14:05:36] 2026-01-24 13:04:41,834 | INFO     | intersect: 10337377405.519093
[2026-01-24 14:05:36] 2026-01-24 13:04:41,835 | INFO     | chi2: 1.6603949242988345
[2026-01-24 14:05:36] 2026-01-24 13:04:41,835 | INFO     | current chi2=1.6603949242988345 (change=3.420702501747895 %)
[2026-01-24 14:05:36] 2026-01-24 13:04:41,835 | INFO     | left removable region: 30
[2026-01-24 14:05:36] 2026-01-24 13:04:41,836 | INFO     | sum of square deviations: 5640782972.0
[2026-01-24 14:05:36] 2026-01-24 13:04:41,839 | INFO     | sum of deviations: -3784872795.0000005
[2026-01-24 14:05:36] 2026-01-24 13:04:41,839 | INFO     | mean x: 1769251512.0
[2026-01-24 14:05:36] 2026-01-24 13:04:41,839 | INFO     | mean y: 2513850.699619772
[2026-01-24 14:05:36] 2026-01-24 13:04:41,839 | INFO     | intersect: 1189652577.454629
[2026-01-24 14:05:36] 2026-01-24 13:04:41,840 | INFO     | chi2: 0.0078743958765773
[2026-01-24 14:05:36] 2026-01-24 13:04:41,840 | INFO     | current memory leak: -0.67 B/s (using 263 data points, chi2=0.01)
[2026-01-24 14:05:36] 2026-01-24 13:04:41,840 | INFO     | could have reported an average CPU frequency of 1999 MHz (14 samples)
[2026-01-24 14:05:36] 2026-01-24 13:04:41,841 | INFO     | ..............................
[2026-01-24 14:05:36] 2026-01-24 13:04:41,841 | INFO     | . Timing measurements:
[2026-01-24 14:05:36] 2026-01-24 13:04:41,841 | INFO     | . get job = 0 s
[2026-01-24 14:05:36] 2026-01-24 13:04:41,841 | INFO     | . initial setup = 122 s
[2026-01-24 14:05:36] 2026-01-24 13:04:41,841 | INFO     | . payload setup = 147 s
[2026-01-24 14:05:36] 2026-01-24 13:04:41,841 | INFO     | . stage-in = 0 s
[2026-01-24 14:05:36] 2026-01-24 13:04:41,841 | INFO     | . payload execution = 18307 s
[2026-01-24 14:05:36] 2026-01-24 13:04:41,842 | INFO     | . stage-out = 3 s
[2026-01-24 14:05:36] 2026-01-24 13:04:41,842 | INFO     | . log creation = 1 s
[2026-01-24 14:05:36] 2026-01-24 13:04:41,842 | INFO     | ..............................
[2026-01-24 14:05:36] 2026-01-24 13:04:42,011 | INFO     | 
[2026-01-24 14:05:36] 2026-01-24 13:04:42,011 | INFO     | job summary report
[2026-01-24 14:05:36] 2026-01-24 13:04:42,011 | INFO     | --------------------------------------------------
[2026-01-24 14:05:36] 2026-01-24 13:04:42,011 | INFO     | PanDA job id: 6978942371
[2026-01-24 14:05:36] 2026-01-24 13:04:42,012 | INFO     | task id: 48314259
[2026-01-24 14:05:36] 2026-01-24 13:04:42,012 | INFO     | errors: (none)
[2026-01-24 14:05:36] 2026-01-24 13:04:42,012 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-24 14:05:36] 2026-01-24 13:04:42,012 | INFO     | pilot state: finished 
[2026-01-24 14:05:36] 2026-01-24 13:04:42,012 | INFO     | transexitcode: 0
[2026-01-24 14:05:36] 2026-01-24 13:04:42,012 | INFO     | exeerrorcode: 0
[2026-01-24 14:05:36] 2026-01-24 13:04:42,012 | INFO     | exeerrordiag: 
[2026-01-24 14:05:36] 2026-01-24 13:04:42,012 | INFO     | exitcode: 0
[2026-01-24 14:05:36] 2026-01-24 13:04:42,012 | INFO     | exitmsg: OK
[2026-01-24 14:05:36] 2026-01-24 13:04:42,013 | INFO     | cpuconsumptiontime: 69731 s
[2026-01-24 14:05:36] 2026-01-24 13:04:42,013 | INFO     | nevents: 400
[2026-01-24 14:05:36] 2026-01-24 13:04:42,013 | INFO     | neventsw: 0
[2026-01-24 14:05:36] 2026-01-24 13:04:42,013 | INFO     | pid: 10910
[2026-01-24 14:05:36] 2026-01-24 13:04:42,013 | INFO     | pgrp: 10910
[2026-01-24 14:05:36] 2026-01-24 13:04:42,013 | INFO     | corecount: 8
[2026-01-24 14:05:36] 2026-01-24 13:04:42,013 | INFO     | event service: False
[2026-01-24 14:05:36] 2026-01-24 13:04:42,013 | INFO     | sizes: {0: 2283282, 1: 2284340, 2: 2284428, 18459: 2316838, 18463: 2325836, 18464: 2325892, 18466: 2326214}
[2026-01-24 14:05:36] 2026-01-24 13:04:42,013 | INFO     | --------------------------------------------------
[2026-01-24 14:05:36] 2026-01-24 13:04:42,014 | INFO     | 
[2026-01-24 14:05:36] 2026-01-24 13:04:42,014 | INFO     | executing command: ls -lF /var/lib/boinc/slots/2
[2026-01-24 14:05:36] 2026-01-24 13:04:42,505 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-24 14:05:36] 2026-01-24 13:04:42,505 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-24 14:05:36] 2026-01-24 13:04:42,505 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-24 14:05:36] 2026-01-24 13:04:42,505 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-24 14:05:36] 2026-01-24 13:04:42,505 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-24 14:05:36] 2026-01-24 13:04:42,506 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-24 14:05:36] 2026-01-24 13:04:42,506 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-24 14:05:36] 2026-01-24 13:04:42,506 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-24 14:05:36] 2026-01-24 13:04:42,506 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-24 14:05:36] 2026-01-24 13:04:42,506 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-24 14:05:36] 2026-01-24 13:04:42,506 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-24 14:05:36] 2026-01-24 13:04:42,506 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-24 14:05:36] 2026-01-24 13:04:42,506 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-24 14:05:36] 2026-01-24 13:04:42,506 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-24 14:05:36] 2026-01-24 13:04:42,506 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-24 14:05:36] 2026-01-24 13:04:42,507 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-24 14:05:36] 2026-01-24 13:04:42,507 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-24 14:05:36] 2026-01-24 13:04:42,507 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-24 14:05:36] 2026-01-24 13:04:42,507 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-24 14:05:36] 2026-01-24 13:04:42,507 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-24 14:05:36] 2026-01-24 13:04:42,507 | INFO     | job 6978942371 has completed (purged errors)
[2026-01-24 14:05:36] 2026-01-24 13:04:42,507 | INFO     | overall cleanup function is called
[2026-01-24 14:05:36] 2026-01-24 13:04:43,516 | INFO     | --- collectZombieJob: --- 10, [10910]
[2026-01-24 14:05:36] 2026-01-24 13:04:43,516 | INFO     | zombie collector waiting for pid 10910
[2026-01-24 14:05:36] 2026-01-24 13:04:43,516 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-24 14:05:36] 2026-01-24 13:04:43,516 | INFO     | collected zombie processes
[2026-01-24 14:05:36] 2026-01-24 13:04:43,516 | INFO     | will attempt to kill all subprocesses of pid=10910
[2026-01-24 14:05:36] 2026-01-24 13:04:43,611 | INFO     | process IDs to be killed: [10910] (in reverse order)
[2026-01-24 14:05:36] 2026-01-24 13:04:44,551 | WARNING  | found no corresponding commands to process id(s)
[2026-01-24 14:05:36] 2026-01-24 13:04:44,552 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-24 14:05:36] 2026-01-24 13:04:44,554 | INFO     | did not find any defunct processes belonging to 10910
[2026-01-24 14:05:36] 2026-01-24 13:04:44,555 | INFO     | did not find any defunct processes belonging to 10910
[2026-01-24 14:05:36] 2026-01-24 13:04:44,556 | INFO     | ready for new job
[2026-01-24 14:05:36] 2026-01-24 13:04:44,556 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-24 14:05:36] 2026-01-24 13:04:44,558 | INFO     | **************************************
[2026-01-24 14:05:36] 2026-01-24 13:04:44,558 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-24 14:05:36] 2026-01-24 13:04:44,558 | INFO     | **************************************
[2026-01-24 14:05:36] 2026-01-24 13:04:44,558 | INFO     | 
[2026-01-24 14:05:36] 2026-01-24 13:04:44,559 | INFO     | pilot is running in a VM
[2026-01-24 14:05:36] 2026-01-24 13:04:44,559 | INFO     | architecture information:
[2026-01-24 14:05:36] 2026-01-24 13:04:44,569 | INFO     | executing command: cat /etc/os-release
[2026-01-24 14:05:36] 2026-01-24 13:04:44,876 | INFO     | cat /etc/os-release:
[2026-01-24 14:05:36] NAME="CentOS Linux"
[2026-01-24 14:05:36] VERSION="7 (Core)"
[2026-01-24 14:05:36] ID="centos"
[2026-01-24 14:05:36] ID_LIKE="rhel fedora"
[2026-01-24 14:05:36] VERSION_ID="7"
[2026-01-24 14:05:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-24 14:05:36] ANSI_COLOR="0;31"
[2026-01-24 14:05:36] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-24 14:05:36] HOME_URL="https://www.centos.org/"
[2026-01-24 14:05:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-24 14:05:36] 
[2026-01-24 14:05:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-24 14:05:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-24 14:05:36] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-24 14:05:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-24 14:05:36] 
[2026-01-24 14:05:36] 2026-01-24 13:04:44,877 | INFO     | **************************************
[2026-01-24 14:05:36] 2026-01-24 13:04:45,380 | INFO     | executing command: df -mP /var/lib/boinc/slots/2
[2026-01-24 14:05:36] 2026-01-24 13:04:45,619 | INFO     | sufficient remaining disk space (496021536768 B)
[2026-01-24 14:05:36] 2026-01-24 13:04:45,620 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-24 14:05:36] 2026-01-24 13:04:45,620 | INFO     | current server update state: UPDATING_FINAL
[2026-01-24 14:05:36] 2026-01-24 13:04:45,620 | INFO     | update_server=False
[2026-01-24 14:05:36] 2026-01-24 13:04:45,620 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-24 14:05:36] 2026-01-24 13:04:45,624 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-24 14:05:36] 2026-01-24 13:04:45,768 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-24 14:05:36] 2026-01-24 13:04:45,768 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-24 14:05:36] 2026-01-24 13:04:45,768 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-24 14:05:36] 2026-01-24 13:04:45,768 | INFO     | will abort loop
[2026-01-24 14:05:36] 2026-01-24 13:04:45,899 | INFO     | all job control threads have been joined
[2026-01-24 14:05:36] 2026-01-24 13:04:45,930 | INFO     | all data control threads have been joined
[2026-01-24 14:05:36] 2026-01-24 13:04:46,406 | INFO     | all payload control threads have been joined
[2026-01-24 14:05:36] 2026-01-24 13:04:46,626 | INFO     | [job] retrieve thread has finished
[2026-01-24 14:05:36] 2026-01-24 13:04:46,660 | INFO     | [data] copytool_in thread has finished
[2026-01-24 14:05:36] 2026-01-24 13:04:46,686 | INFO     | [payload] validate_post thread has finished
[2026-01-24 14:05:36] 2026-01-24 13:04:46,742 | INFO     | [payload] validate_pre thread has finished
[2026-01-24 14:05:36] 2026-01-24 13:04:46,774 | INFO     | [job] job monitor thread has finished
[2026-01-24 14:05:36] 2026-01-24 13:04:46,798 | INFO     | [payload] failed_post thread has finished
[2026-01-24 14:05:36] 2026-01-24 13:04:46,855 | INFO     | [job] create_data_payload thread has finished
[2026-01-24 14:05:36] 2026-01-24 13:04:46,905 | INFO     | [job] control thread has finished
[2026-01-24 14:05:36] 2026-01-24 13:04:46,908 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-24 14:05:36] 2026-01-24 13:04:46,936 | INFO     | [data] control thread has finished
[2026-01-24 14:05:36] 2026-01-24 13:04:47,026 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-24 14:05:36] 2026-01-24 13:04:47,276 | INFO     | [payload] execute_payloads thread has finished
[2026-01-24 14:05:36] 2026-01-24 13:04:47,412 | INFO     | [payload] control thread has finished
[2026-01-24 14:05:36] 2026-01-24 13:04:47,542 | INFO     | [job] validate thread has finished
[2026-01-24 14:05:36] 2026-01-24 13:04:47,745 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-24 14:05:36] 2026-01-24 13:04:48,032 | INFO     | [job] queue monitor thread has finished
[2026-01-24 14:05:36] 2026-01-24 13:04:48,915 | INFO     | [data] copytool_out thread has finished
[2026-01-24 14:05:36] 2026-01-24 13:04:49,633 | INFO     | [data] queue_monitor thread has finished
[2026-01-24 14:05:36] 2026-01-24 13:05:14,404 | INFO     | PID=6483 has CPU usage=2.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-24 14:05:36] 2026-01-24 13:05:14,404 | INFO     | .. there are 2 such processes running
[2026-01-24 14:05:36] 2026-01-24 13:05:14,405 | INFO     | found 0 job(s) in 20 queues
[2026-01-24 14:05:36] 2026-01-24 13:05:14,406 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-24 14:05:36] 2026-01-24 13:05:14,406 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-24 14:05:36] 2026-01-24 13:05:24,337 | INFO     | [monitor] cgroup control has ended
[2026-01-24 14:05:36] 2026-01-24 13:05:26,208 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140275869452096)>', '<ExcThread(monitor, started 140274906953472)>']
[2026-01-24 14:05:36] 2026-01-24 13:05:26,478 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-24 14:05:36] 2026-01-24 13:05:26,478 | INFO     | [monitor] control thread has ended
[2026-01-24 14:05:36] 2026-01-24 13:05:31,234 | INFO     | all workflow threads have been joined
[2026-01-24 14:05:36] 2026-01-24 13:05:31,234 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-24 14:05:36] 2026-01-24 13:05:31,234 | INFO     | traces error code: 0
[2026-01-24 14:05:36] 2026-01-24 13:05:31,234 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-24 14:05:36] 2026-01-24 13:05:31,658 [wrapper] ==== pilot stdout END ====
[2026-01-24 14:05:36] 2026-01-24 13:05:31,748 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-24 14:05:36] 2026-01-24 13:05:31,822 [wrapper] pilotpid: 6483
[2026-01-24 14:05:36] 2026-01-24 13:05:31,913 [wrapper] Pilot exit status: 0
[2026-01-24 14:05:36] 2026-01-24 13:05:32,118 [wrapper] pandaids: 6978942371
[2026-01-24 14:05:36] 2026-01-24 13:05:33,104 [wrapper] cleanup supervisor_pilot 17443 6484
[2026-01-24 14:05:36] 2026-01-24 13:05:33,226 [wrapper] Test setup, not cleaning
[2026-01-24 14:05:36] 2026-01-24 13:05:33,321 [wrapper] apfmon messages muted
[2026-01-24 14:05:36] 2026-01-24 13:05:33,431 [wrapper] ==== wrapper stdout END ====
[2026-01-24 14:05:36] 2026-01-24 13:05:33,550 [wrapper] ==== wrapper stderr END ====
[2026-01-24 14:05:36]  *** Error codes and diagnostics ***
[2026-01-24 14:05:36]     "exeErrorCode": 0,
[2026-01-24 14:05:36]     "exeErrorDiag": "",
[2026-01-24 14:05:36]     "pilotErrorCode": 0,
[2026-01-24 14:05:36]     "pilotErrorDiag": "",
[2026-01-24 14:05:36]  *** Listing of results directory ***
[2026-01-24 14:05:36] total 418788
[2026-01-24 14:05:36] -rw-r--r--. 1 boinc boinc    584422 Jan 23 14:39 pilot3.tar.gz
[2026-01-24 14:05:36] -rwx------. 1 boinc boinc     36322 Jan 23 14:43 runpilot2-wrapper.sh
[2026-01-24 14:05:36] -rw-r--r--. 1 boinc boinc      5111 Jan 23 14:46 queuedata.json
[2026-01-24 14:05:36] -rw-r--r--. 1 boinc boinc       100 Jan 24 08:50 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-24 14:05:36] -rwxr-xr-x. 1 boinc boinc      7986 Jan 24 08:50 run_atlas
[2026-01-24 14:05:36] -rw-r--r--. 1 boinc boinc       105 Jan 24 08:50 job.xml
[2026-01-24 14:05:36] -rw-r--r--. 2 boinc boinc 251643512 Jan 24 08:50 EVNT.48314257._000006.pool.root.1
[2026-01-24 14:05:36] -rw-r--r--. 2 boinc boinc     15845 Jan 24 08:50 start_atlas.sh
[2026-01-24 14:05:36] drwxrwx--x. 2 boinc boinc        68 Jan 24 08:50 shared
[2026-01-24 14:05:36] -rw-r--r--. 2 boinc boinc    597779 Jan 24 08:50 input.tar.gz
[2026-01-24 14:05:36] -rw-r--r--. 1 boinc boinc      6390 Jan 24 08:50 init_data.xml
[2026-01-24 14:05:36] -rw-r--r--. 1 boinc boinc         0 Jan 24 08:50 boinc_lockfile
[2026-01-24 14:05:36] -rw-r--r--. 1 boinc boinc      2622 Jan 24 08:50 pandaJob.out
[2026-01-24 14:05:36] -rw-------. 1 boinc boinc       415 Jan 24 08:56 workernode_map.json
[2026-01-24 14:05:36] -rw-------. 1 boinc boinc   1004238 Jan 24 08:56 agis_schedconf.cvmfs.json
[2026-01-24 14:05:36] drwx------. 5 boinc boinc      4096 Jan 24 08:56 pilot3
[2026-01-24 14:05:36] -rw-------. 1 boinc boinc 167037922 Jan 24 14:03 HITS.48314259._000148.pool.root.1
[2026-01-24 14:05:36] -rw-r--r--. 1 boinc boinc       531 Jan 24 14:03 boinc_task_state.xml
[2026-01-24 14:05:36] -rw-------. 1 boinc boinc      1022 Jan 24 14:04 memory_monitor_summary.json
[2026-01-24 14:05:36] -rw-------. 1 boinc boinc   1516246 Jan 24 14:04 agis_ddmendpoints.agis.ALL.json
[2026-01-24 14:05:36] -rw-------. 1 boinc boinc    531816 Jan 24 14:04 log.48314259._000148.job.log.tgz.1
[2026-01-24 14:05:36] -rw-------. 1 boinc boinc      6307 Jan 24 14:04 heartbeat.json
[2026-01-24 14:05:36] -rw-------. 1 boinc boinc        95 Jan 24 14:05 pilot_heartbeat.json
[2026-01-24 14:05:36] -rw-------. 1 boinc boinc      5065 Jan 24 14:05 pilotlog.txt
[2026-01-24 14:05:36] -rw-r--r--. 1 boinc boinc      8192 Jan 24 14:05 boinc_mmap_file
[2026-01-24 14:05:36] -rw-r--r--. 1 boinc boinc        28 Jan 24 14:05 wrapper_checkpoint.txt
[2026-01-24 14:05:36] -rw-------. 1 boinc boinc   2585881 Jan 24 14:05 log.48314259._000148.job.log.1
[2026-01-24 14:05:36] -rw-------. 1 boinc boinc       357 Jan 24 14:05 output.list
[2026-01-24 14:05:36] -rw-r--r--. 1 boinc boinc       620 Jan 24 14:05 runtime_log
[2026-01-24 14:05:36] -rw-------. 1 boinc boinc   3133440 Jan 24 14:05 result.tar.gz
[2026-01-24 14:05:36] -rw-r--r--. 1 boinc boinc      8816 Jan 24 14:05 runtime_log.err
[2026-01-24 14:05:36] -rw-------. 1 boinc boinc       656 Jan 24 14:05 jVGODmicW38nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm3u2KDmDgbmgn.diag
[2026-01-24 14:05:36] -rw-r--r--. 1 boinc boinc     20707 Jan 24 14:05 stderr.txt
[2026-01-24 14:05:36] HITS file was successfully produced:
[2026-01-24 14:05:36] -rw-------. 1 boinc boinc 167037922 Jan 24 14:03 shared/HITS.pool.root.1
[2026-01-24 14:05:36]  *** Contents of shared directory: ***
[2026-01-24 14:05:36] total 412532
[2026-01-24 14:05:36] -rw-r--r--. 2 boinc boinc 251643512 Jan 24 08:50 ATLAS.root_0
[2026-01-24 14:05:36] -rw-r--r--. 2 boinc boinc     15845 Jan 24 08:50 start_atlas.sh
[2026-01-24 14:05:36] -rw-r--r--. 2 boinc boinc    597779 Jan 24 08:50 input.tar.gz
[2026-01-24 14:05:36] -rw-------. 1 boinc boinc 167037922 Jan 24 14:03 HITS.pool.root.1
[2026-01-24 14:05:36] -rw-------. 1 boinc boinc   3133440 Jan 24 14:05 result.tar.gz
14:05:37 (2474): run_atlas exited; CPU time 69926.922766
14:05:37 (2474): called boinc_finish(0)

</stderr_txt>
]]>

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