Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
08:01:14 (1858780): wrapper (7.7.26015): starting
08:01:14 (1858780): wrapper: running run_atlas (--nthreads 6)
[2026-01-24 08:01:14] Arguments: --nthreads 6
[2026-01-24 08:01:14] Threads: 6
[2026-01-24 08:01:14] Checking for CVMFS
[2026-01-24 08:01:14] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-24 08:01:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-24 08:01:14] Running cvmfs_config stat atlas.cern.ch
[2026-01-24 08:01:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-24 08:01:15] 2.13.3.0 1625780 964 62072 155451 1 188 13422307 20971520 885 130560 0 770535 99.993 31666 14 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.35.143:3126 1
[2026-01-24 08:01:15] CVMFS is ok
[2026-01-24 08:01:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-24 08:01:15] Checking for apptainer binary...
[2026-01-24 08:01:15] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-24 08:01:15] Running /usr/bin/apptainer --version
[2026-01-24 08:01:15] apptainer version 1.4.5-2.el9
[2026-01-24 08:01:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-24 08:01:15] testio005
[2026-01-24 08:01:15] apptainer works
[2026-01-24 08:01:15] Set ATHENA_PROC_NUMBER=6
[2026-01-24 08:01:15] Set ATHENA_CORE_NUMBER=6
[2026-01-24 08:01:15] Starting ATLAS job with PandaID=6979603836
[2026-01-24 08:01:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-24 09:50:48]  *** The last 200 lines of the pilot log: ***
[2026-01-24 09:50:48] 2026-01-24 00:49:46,336 | INFO     | extracted standard info from prmon json
[2026-01-24 09:50:48] 2026-01-24 00:49:46,336 | INFO     | extracted standard memory fields from prmon json
[2026-01-24 09:50:48] 2026-01-24 00:49:46,336 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-24 09:50:48] 2026-01-24 00:49:46,336 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-24 09:50:48] 2026-01-24 00:49:46,336 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-24 09:50:48] 2026-01-24 00:49:46,338 | INFO     | fitting pss+swap vs Time
[2026-01-24 09:50:48] 2026-01-24 00:49:46,339 | INFO     | sum of square deviations: 379832238.0
[2026-01-24 09:50:48] 2026-01-24 00:49:46,339 | INFO     | sum of deviations: 12172067550.999996
[2026-01-24 09:50:48] 2026-01-24 00:49:46,339 | INFO     | mean x: 1769212544.0
[2026-01-24 09:50:48] 2026-01-24 00:49:46,339 | INFO     | mean y: 2374914.2056074766
[2026-01-24 09:50:48] 2026-01-24 00:49:46,340 | INFO     | intersect: -56693640966.48053
[2026-01-24 09:50:48] 2026-01-24 00:49:46,340 | INFO     | chi2: 2.4671616441175725
[2026-01-24 09:50:48] 2026-01-24 00:49:46,340 | INFO     | sum of square deviations: 329031285.5
[2026-01-24 09:50:48] 2026-01-24 00:49:46,341 | INFO     | sum of deviations: 18235578296.5
[2026-01-24 09:50:48] 2026-01-24 00:49:46,341 | INFO     | mean x: 1769212391.5
[2026-01-24 09:50:48] 2026-01-24 00:49:46,341 | INFO     | mean y: 2392335.931372549
[2026-01-24 09:50:48] 2026-01-24 00:49:46,341 | INFO     | intersect: -98050931193.19626
[2026-01-24 09:50:48] 2026-01-24 00:49:46,341 | INFO     | chi2: 1.7045457315153822
[2026-01-24 09:50:48] 2026-01-24 00:49:46,341 | INFO     | current chi2=1.7045457315153822 (change=30.91065858698344 %)
[2026-01-24 09:50:48] 2026-01-24 00:49:46,342 | INFO     | sum of square deviations: 282974608.0
[2026-01-24 09:50:48] 2026-01-24 00:49:46,342 | INFO     | sum of deviations: 17259897296.0
[2026-01-24 09:50:48] 2026-01-24 00:49:46,342 | INFO     | mean x: 1769212239.0
[2026-01-24 09:50:48] 2026-01-24 00:49:46,342 | INFO     | mean y: 2389099.711340206
[2026-01-24 09:50:48] 2026-01-24 00:49:46,342 | INFO     | intersect: -107909842869.75996
[2026-01-24 09:50:48] 2026-01-24 00:49:46,343 | INFO     | chi2: 1.7073024235970076
[2026-01-24 09:50:48] 2026-01-24 00:49:46,343 | INFO     | current chi2=1.7073024235970076 (change=-0.1617259091766671 %)
[2026-01-24 09:50:48] 2026-01-24 00:49:46,343 | INFO     | right removable region: 96
[2026-01-24 09:50:48] 2026-01-24 00:49:46,343 | INFO     | sum of square deviations: 329031285.5
[2026-01-24 09:50:48] 2026-01-24 00:49:46,344 | INFO     | sum of deviations: -5231297109.0
[2026-01-24 09:50:48] 2026-01-24 00:49:46,344 | INFO     | mean x: 1769212696.5
[2026-01-24 09:50:48] 2026-01-24 00:49:46,344 | INFO     | mean y: 2426143.568627451
[2026-01-24 09:50:48] 2026-01-24 00:49:46,344 | INFO     | intersect: 28131293130.615498
[2026-01-24 09:50:48] 2026-01-24 00:49:46,344 | INFO     | chi2: 0.8248275567356312
[2026-01-24 09:50:48] 2026-01-24 00:49:46,344 | INFO     | current chi2=0.8248275567356312 (change=66.56775373019198 %)
[2026-01-24 09:50:48] 2026-01-24 00:49:46,344 | INFO     | sum of square deviations: 282974608.0
[2026-01-24 09:50:48] 2026-01-24 00:49:46,345 | INFO     | sum of deviations: -5361603906.0
[2026-01-24 09:50:48] 2026-01-24 00:49:46,345 | INFO     | mean x: 1769212849.0
[2026-01-24 09:50:48] 2026-01-24 00:49:46,345 | INFO     | mean y: 2426420.587628866
[2026-01-24 09:50:48] 2026-01-24 00:49:46,345 | INFO     | intersect: 33524227506.51329
[2026-01-24 09:50:48] 2026-01-24 00:49:46,345 | INFO     | chi2: 0.8094460051138267
[2026-01-24 09:50:48] 2026-01-24 00:49:46,346 | INFO     | current chi2=0.8094460051138267 (change=1.8648202883374991 %)
[2026-01-24 09:50:48] 2026-01-24 00:49:46,346 | INFO     | left removable region: 20
[2026-01-24 09:50:48] 2026-01-24 00:49:46,346 | INFO     | sum of square deviations: 136095575.0
[2026-01-24 09:50:48] 2026-01-24 00:49:46,346 | INFO     | sum of deviations: 841669734.5000001
[2026-01-24 09:50:48] 2026-01-24 00:49:46,346 | INFO     | mean x: 1769212818.5
[2026-01-24 09:50:48] 2026-01-24 00:49:46,346 | INFO     | mean y: 2447906.486842105
[2026-01-24 09:50:48] 2026-01-24 00:49:46,347 | INFO     | intersect: -10939075234.2978
[2026-01-24 09:50:48] 2026-01-24 00:49:46,347 | INFO     | chi2: 0.0009306133630293782
[2026-01-24 09:50:48] 2026-01-24 00:49:46,347 | INFO     | current memory leak: 6.18 B/s (using 76 data points, chi2=0.00)
[2026-01-24 09:50:48] 2026-01-24 00:49:46,347 | INFO     | could have reported an average CPU frequency of 3319 MHz (7 samples)
[2026-01-24 09:50:48] 2026-01-24 00:49:46,347 | INFO     | ..............................
[2026-01-24 09:50:48] 2026-01-24 00:49:46,348 | INFO     | . Timing measurements:
[2026-01-24 09:50:48] 2026-01-24 00:49:46,348 | INFO     | . get job = 0 s
[2026-01-24 09:50:48] 2026-01-24 00:49:46,348 | INFO     | . initial setup = 8 s
[2026-01-24 09:50:48] 2026-01-24 00:49:46,348 | INFO     | . payload setup = 4 s
[2026-01-24 09:50:48] 2026-01-24 00:49:46,348 | INFO     | . stage-in = 0 s
[2026-01-24 09:50:48] 2026-01-24 00:49:46,348 | INFO     | . payload execution = 6471 s
[2026-01-24 09:50:48] 2026-01-24 00:49:46,348 | INFO     | . stage-out = 0 s
[2026-01-24 09:50:48] 2026-01-24 00:49:46,348 | INFO     | . log creation = 0 s
[2026-01-24 09:50:48] 2026-01-24 00:49:46,348 | INFO     | ..............................
[2026-01-24 09:50:48] 2026-01-24 00:49:46,437 | INFO     | 
[2026-01-24 09:50:48] 2026-01-24 00:49:46,437 | INFO     | job summary report
[2026-01-24 09:50:48] 2026-01-24 00:49:46,437 | INFO     | --------------------------------------------------
[2026-01-24 09:50:48] 2026-01-24 00:49:46,437 | INFO     | PanDA job id: 6979603836
[2026-01-24 09:50:48] 2026-01-24 00:49:46,437 | INFO     | task id: 48317872
[2026-01-24 09:50:48] 2026-01-24 00:49:46,437 | INFO     | errors: (none)
[2026-01-24 09:50:48] 2026-01-24 00:49:46,437 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-24 09:50:48] 2026-01-24 00:49:46,438 | INFO     | pilot state: finished 
[2026-01-24 09:50:48] 2026-01-24 00:49:46,438 | INFO     | transexitcode: 0
[2026-01-24 09:50:48] 2026-01-24 00:49:46,438 | INFO     | exeerrorcode: 0
[2026-01-24 09:50:48] 2026-01-24 00:49:46,438 | INFO     | exeerrordiag: 
[2026-01-24 09:50:48] 2026-01-24 00:49:46,438 | INFO     | exitcode: 0
[2026-01-24 09:50:48] 2026-01-24 00:49:46,438 | INFO     | exitmsg: OK
[2026-01-24 09:50:48] 2026-01-24 00:49:46,438 | INFO     | cpuconsumptiontime: 36176 s
[2026-01-24 09:50:48] 2026-01-24 00:49:46,438 | INFO     | nevents: 400
[2026-01-24 09:50:48] 2026-01-24 00:49:46,438 | INFO     | neventsw: 0
[2026-01-24 09:50:48] 2026-01-24 00:49:46,438 | INFO     | pid: 1867189
[2026-01-24 09:50:48] 2026-01-24 00:49:46,438 | INFO     | pgrp: 1867189
[2026-01-24 09:50:48] 2026-01-24 00:49:46,438 | INFO     | corecount: 6
[2026-01-24 09:50:48] 2026-01-24 00:49:46,439 | INFO     | event service: False
[2026-01-24 09:50:48] 2026-01-24 00:49:46,439 | INFO     | sizes: {0: 2284223, 11: 2284223, 6480: 2311355, 6481: 2320353, 6483: 2320409, 6484: 2320603}
[2026-01-24 09:50:48] 2026-01-24 00:49:46,439 | INFO     | --------------------------------------------------
[2026-01-24 09:50:48] 2026-01-24 00:49:46,439 | INFO     | 
[2026-01-24 09:50:48] 2026-01-24 00:49:46,439 | INFO     | executing command: ls -lF /var/lib/boinc/slots/2
[2026-01-24 09:50:48] 2026-01-24 00:49:46,456 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-24 09:50:48] 2026-01-24 00:49:46,456 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-24 09:50:48] 2026-01-24 00:49:46,456 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-24 09:50:48] 2026-01-24 00:49:46,456 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-24 09:50:48] 2026-01-24 00:49:46,457 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-24 09:50:48] 2026-01-24 00:49:46,457 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-24 09:50:48] 2026-01-24 00:49:46,457 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-24 09:50:48] 2026-01-24 00:49:46,457 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-24 09:50:48] 2026-01-24 00:49:46,457 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-24 09:50:48] 2026-01-24 00:49:46,457 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-24 09:50:48] 2026-01-24 00:49:46,457 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-24 09:50:48] 2026-01-24 00:49:46,457 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-24 09:50:48] 2026-01-24 00:49:46,457 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-24 09:50:48] 2026-01-24 00:49:46,457 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-24 09:50:48] 2026-01-24 00:49:46,457 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-24 09:50:48] 2026-01-24 00:49:46,458 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-24 09:50:48] 2026-01-24 00:49:46,458 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-24 09:50:48] 2026-01-24 00:49:46,458 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-24 09:50:48] 2026-01-24 00:49:46,458 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-24 09:50:48] 2026-01-24 00:49:46,458 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-24 09:50:48] 2026-01-24 00:49:46,458 | INFO     | job 6979603836 has completed (purged errors)
[2026-01-24 09:50:48] 2026-01-24 00:49:46,458 | INFO     | overall cleanup function is called
[2026-01-24 09:50:48] 2026-01-24 00:49:47,466 | INFO     | --- collectZombieJob: --- 10, [1867189]
[2026-01-24 09:50:48] 2026-01-24 00:49:47,466 | INFO     | zombie collector waiting for pid 1867189
[2026-01-24 09:50:48] 2026-01-24 00:49:47,466 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-24 09:50:48] 2026-01-24 00:49:47,466 | INFO     | collected zombie processes
[2026-01-24 09:50:48] 2026-01-24 00:49:47,466 | INFO     | will attempt to kill all subprocesses of pid=1867189
[2026-01-24 09:50:48] 2026-01-24 00:49:47,573 | INFO     | process IDs to be killed: [1867189] (in reverse order)
[2026-01-24 09:50:48] 2026-01-24 00:49:47,618 | WARNING  | found no corresponding commands to process id(s)
[2026-01-24 09:50:48] 2026-01-24 00:49:47,618 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-24 09:50:48] 2026-01-24 00:49:47,621 | INFO     | did not find any defunct processes belonging to 1867189
[2026-01-24 09:50:48] 2026-01-24 00:49:47,625 | INFO     | did not find any defunct processes belonging to 1867189
[2026-01-24 09:50:48] 2026-01-24 00:49:47,625 | INFO     | ready for new job
[2026-01-24 09:50:48] 2026-01-24 00:49:47,625 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-24 09:50:48] 2026-01-24 00:49:47,626 | INFO     | **************************************
[2026-01-24 09:50:48] 2026-01-24 00:49:47,627 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-24 09:50:48] 2026-01-24 00:49:47,627 | INFO     | **************************************
[2026-01-24 09:50:48] 2026-01-24 00:49:47,627 | INFO     | 
[2026-01-24 09:50:48] 2026-01-24 00:49:47,628 | INFO     | architecture information:
[2026-01-24 09:50:48] 2026-01-24 00:49:47,628 | INFO     | executing command: cat /etc/os-release
[2026-01-24 09:50:48] 2026-01-24 00:49:47,645 | INFO     | cat /etc/os-release:
[2026-01-24 09:50:48] NAME="CentOS Linux"
[2026-01-24 09:50:48] VERSION="7 (Core)"
[2026-01-24 09:50:48] ID="centos"
[2026-01-24 09:50:48] ID_LIKE="rhel fedora"
[2026-01-24 09:50:48] VERSION_ID="7"
[2026-01-24 09:50:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-24 09:50:48] ANSI_COLOR="0;31"
[2026-01-24 09:50:48] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-24 09:50:48] HOME_URL="https://www.centos.org/"
[2026-01-24 09:50:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-24 09:50:48] 
[2026-01-24 09:50:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-24 09:50:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-24 09:50:48] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-24 09:50:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-24 09:50:48] 
[2026-01-24 09:50:48] 2026-01-24 00:49:47,645 | INFO     | **************************************
[2026-01-24 09:50:48] 2026-01-24 00:49:47,986 | WARNING  | process 1867189 can no longer be monitored (due to stat problems) - aborting
[2026-01-24 09:50:48] 2026-01-24 00:49:48,069 | INFO     | using path: /var/lib/boinc/slots/2/memory_monitor_summary.json (trf name=prmon)
[2026-01-24 09:50:48] 2026-01-24 00:49:48,148 | INFO     | executing command: df -mP /var/lib/boinc/slots/2
[2026-01-24 09:50:48] 2026-01-24 00:49:48,168 | INFO     | sufficient remaining disk space (96269762560 B)
[2026-01-24 09:50:48] 2026-01-24 00:49:48,169 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-24 09:50:48] 2026-01-24 00:49:48,169 | INFO     | current server update state: UPDATING_FINAL
[2026-01-24 09:50:48] 2026-01-24 00:49:48,169 | INFO     | update_server=False
[2026-01-24 09:50:48] 2026-01-24 00:49:48,169 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-24 09:50:48] 2026-01-24 00:49:48,169 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-24 09:50:48] 2026-01-24 00:49:48,170 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-24 09:50:48] 2026-01-24 00:49:48,179 | INFO     | number of running child processes to parent process 1867189: 1
[2026-01-24 09:50:48] 2026-01-24 00:49:48,179 | INFO     | maximum number of monitored processes: 6
[2026-01-24 09:50:48] 2026-01-24 00:49:48,179 | INFO     | aborting job monitoring since job object (job id=6979603836) has expired
[2026-01-24 09:50:48] 2026-01-24 00:49:48,179 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-24 09:50:48] 2026-01-24 00:49:48,179 | INFO     | will abort loop
[2026-01-24 09:50:48] 2026-01-24 00:49:48,280 | INFO     | all data control threads have been joined
[2026-01-24 09:50:48] 2026-01-24 00:49:48,682 | INFO     | all job control threads have been joined
[2026-01-24 09:50:48] 2026-01-24 00:49:48,693 | INFO     | all payload control threads have been joined
[2026-01-24 09:50:48] 2026-01-24 00:49:49,004 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-24 09:50:48] 2026-01-24 00:49:49,174 | INFO     | [job] retrieve thread has finished
[2026-01-24 09:50:48] 2026-01-24 00:49:49,175 | INFO     | [job] queue monitor thread has finished
[2026-01-24 09:50:48] 2026-01-24 00:49:49,185 | INFO     | [job] job monitor thread has finished
[2026-01-24 09:50:48] 2026-01-24 00:49:49,285 | INFO     | [data] control thread has finished
[2026-01-24 09:50:48] 2026-01-24 00:49:49,332 | INFO     | [payload] execute_payloads thread has finished
[2026-01-24 09:50:48] 2026-01-24 00:49:49,540 | INFO     | [job] validate thread has finished
[2026-01-24 09:50:48] 2026-01-24 00:49:49,688 | INFO     | [job] control thread has finished
[2026-01-24 09:50:48] 2026-01-24 00:49:49,698 | INFO     | [payload] control thread has finished
[2026-01-24 09:50:48] 2026-01-24 00:49:49,892 | INFO     | [job] create_data_payload thread has finished
[2026-01-24 09:50:48] 2026-01-24 00:49:49,932 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-24 09:50:48] 2026-01-24 00:49:49,944 | INFO     | [payload] validate_post thread has finished
[2026-01-24 09:50:48] 2026-01-24 00:49:50,068 | INFO     | [payload] validate_pre thread has finished
[2026-01-24 09:50:48] 2026-01-24 00:49:50,533 | INFO     | [data] copytool_in thread has finished
[2026-01-24 09:50:48] 2026-01-24 00:49:50,775 | INFO     | [payload] failed_post thread has finished
[2026-01-24 09:50:48] 2026-01-24 00:49:51,009 | INFO     | [data] copytool_out thread has finished
[2026-01-24 09:50:48] 2026-01-24 00:49:52,175 | INFO     | [data] queue_monitor thread has finished
[2026-01-24 09:50:48] 2026-01-24 00:50:18,400 | INFO     | PID=1862570 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-24 09:50:48] 2026-01-24 00:50:18,400 | INFO     | .. there are 2 such processes running
[2026-01-24 09:50:48] 2026-01-24 00:50:18,400 | INFO     | found 0 job(s) in 20 queues
[2026-01-24 09:50:48] 2026-01-24 00:50:18,400 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-24 09:50:48] 2026-01-24 00:50:18,400 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-24 09:50:48] 2026-01-24 00:50:41,462 | INFO     | [monitor] cgroup control has ended
[2026-01-24 09:50:48] 2026-01-24 00:50:42,938 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139804796323648)>', '<ExcThread(monitor, started 139804272490240)>']
[2026-01-24 09:50:48] 2026-01-24 00:50:43,515 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-24 09:50:48] 2026-01-24 00:50:43,515 | INFO     | [monitor] control thread has ended
[2026-01-24 09:50:48] 2026-01-24 00:50:47,963 | INFO     | all workflow threads have been joined
[2026-01-24 09:50:48] 2026-01-24 00:50:47,963 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-24 09:50:48] 2026-01-24 00:50:47,964 | INFO     | traces error code: 0
[2026-01-24 09:50:48] 2026-01-24 00:50:47,964 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-24 09:50:48] 2026-01-24 00:50:48,066 [wrapper] ==== pilot stdout END ====
[2026-01-24 09:50:48] 2026-01-24 00:50:48,068 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-24 09:50:48] 2026-01-24 00:50:48,071 [wrapper] pilotpid: 1862570
[2026-01-24 09:50:48] 2026-01-24 00:50:48,073 [wrapper] Pilot exit status: 0
[2026-01-24 09:50:48] 2026-01-24 00:50:48,084 [wrapper] pandaids: 6979603836
[2026-01-24 09:50:48] 2026-01-24 00:50:48,111 [wrapper] cleanup supervisor_pilot 1885741 1862571
[2026-01-24 09:50:48] 2026-01-24 00:50:48,113 [wrapper] Test setup, not cleaning
[2026-01-24 09:50:48] 2026-01-24 00:50:48,116 [wrapper] apfmon messages muted
[2026-01-24 09:50:48] 2026-01-24 00:50:48,118 [wrapper] ==== wrapper stdout END ====
[2026-01-24 09:50:48] 2026-01-24 00:50:48,121 [wrapper] ==== wrapper stderr END ====
[2026-01-24 09:50:48]  *** Error codes and diagnostics ***
[2026-01-24 09:50:48]     "exeErrorCode": 0,
[2026-01-24 09:50:48]     "exeErrorDiag": "",
[2026-01-24 09:50:48]     "pilotErrorCode": 0,
[2026-01-24 09:50:48]     "pilotErrorDiag": "",
[2026-01-24 09:50:48]  *** Listing of results directory ***
[2026-01-24 09:50:48] total 662720
[2026-01-24 09:50:48] -rw-r--r--. 1 boinc boinc    584422 Jan 24 02:42 pilot3.tar.gz
[2026-01-24 09:50:48] -rwx------. 1 boinc boinc     36322 Jan 24 02:46 runpilot2-wrapper.sh
[2026-01-24 09:50:48] -rw-r--r--. 1 boinc boinc      5111 Jan 24 02:49 queuedata.json
[2026-01-24 09:50:48] -rw-r--r--. 1 boinc boinc       100 Jan 24 08:01 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-24 09:50:48] -rwxr-xr-x. 1 boinc boinc      7986 Jan 24 08:01 run_atlas
[2026-01-24 09:50:48] -rw-r--r--. 1 boinc boinc       105 Jan 24 08:01 job.xml
[2026-01-24 09:50:48] -rw-r--r--. 1 boinc boinc      9356 Jan 24 08:01 init_data.xml
[2026-01-24 09:50:48] -rw-r--r--. 2 boinc boinc 490729753 Jan 24 08:01 EVNT.48317869._000004.pool.root.1
[2026-01-24 09:50:48] -rw-r--r--. 2 boinc boinc     15845 Jan 24 08:01 start_atlas.sh
[2026-01-24 09:50:48] drwxrwx--x. 2 boinc boinc        68 Jan 24 08:01 shared
[2026-01-24 09:50:48] -rw-r--r--. 2 boinc boinc    597741 Jan 24 08:01 input.tar.gz
[2026-01-24 09:50:48] -rw-r--r--. 1 boinc boinc         0 Jan 24 08:01 boinc_lockfile
[2026-01-24 09:50:48] -rw-r--r--. 1 boinc boinc      2508 Jan 24 08:01 pandaJob.out
[2026-01-24 09:50:48] -rw-------. 1 boinc boinc   1004238 Jan 24 08:01 agis_schedconf.cvmfs.json
[2026-01-24 09:50:48] -rw-------. 1 boinc boinc   1516246 Jan 24 08:01 agis_ddmendpoints.agis.ALL.json
[2026-01-24 09:50:48] -rw-------. 1 boinc boinc       424 Jan 24 08:01 workernode_map.json
[2026-01-24 09:50:48] drwx------. 5 boinc boinc      4096 Jan 24 08:01 pilot3
[2026-01-24 09:50:48] -rw-r--r--. 1 boinc boinc       530 Jan 24 09:49 boinc_task_state.xml
[2026-01-24 09:50:48] -rw-------. 1 boinc boinc 181343107 Jan 24 09:49 HITS.48317872._000197.pool.root.1
[2026-01-24 09:50:48] -rw-------. 1 boinc boinc        95 Jan 24 09:49 pilot_heartbeat.json
[2026-01-24 09:50:48] -rw-------. 1 boinc boinc      1015 Jan 24 09:49 memory_monitor_summary.json
[2026-01-24 09:50:48] -rw-------. 1 boinc boinc    359132 Jan 24 09:49 log.48317872._000197.job.log.tgz.1
[2026-01-24 09:50:48] -rw-------. 1 boinc boinc      6288 Jan 24 09:49 heartbeat.json
[2026-01-24 09:50:48] -rw-r--r--. 1 boinc boinc        27 Jan 24 09:50 wrapper_checkpoint.txt
[2026-01-24 09:50:48] -rw-r--r--. 1 boinc boinc      8192 Jan 24 09:50 boinc_mmap_file
[2026-01-24 09:50:48] -rw-------. 1 boinc boinc      5340 Jan 24 09:50 pilotlog.txt
[2026-01-24 09:50:48] -rw-------. 1 boinc boinc    950141 Jan 24 09:50 log.48317872._000197.job.log.1
[2026-01-24 09:50:48] -rw-------. 1 boinc boinc       357 Jan 24 09:50 output.list
[2026-01-24 09:50:48] -rw-r--r--. 1 boinc boinc       620 Jan 24 09:50 runtime_log
[2026-01-24 09:50:48] -rw-------. 1 boinc boinc   1331200 Jan 24 09:50 result.tar.gz
[2026-01-24 09:50:48] -rw-------. 1 boinc boinc       643 Jan 24 09:50 WIFODmlPa38n9Rq4apOajLDm4fhM0noT9bVo0NGKDmkfwKDmLUKWvm.diag
[2026-01-24 09:50:48] -rw-r--r--. 1 boinc boinc      8774 Jan 24 09:50 runtime_log.err
[2026-01-24 09:50:48] -rw-r--r--. 1 boinc boinc     20726 Jan 24 09:50 stderr.txt
[2026-01-24 09:50:48] HITS file was successfully produced:
[2026-01-24 09:50:48] -rw-------. 1 boinc boinc 181343107 Jan 24 09:49 shared/HITS.pool.root.1
[2026-01-24 09:50:48]  *** Contents of shared directory: ***
[2026-01-24 09:50:48] total 658228
[2026-01-24 09:50:48] -rw-r--r--. 2 boinc boinc 490729753 Jan 24 08:01 ATLAS.root_0
[2026-01-24 09:50:48] -rw-r--r--. 2 boinc boinc     15845 Jan 24 08:01 start_atlas.sh
[2026-01-24 09:50:48] -rw-r--r--. 2 boinc boinc    597741 Jan 24 08:01 input.tar.gz
[2026-01-24 09:50:48] -rw-------. 1 boinc boinc 181343107 Jan 24 09:49 HITS.pool.root.1
[2026-01-24 09:50:48] -rw-------. 1 boinc boinc   1331200 Jan 24 09:50 result.tar.gz
09:50:49 (1858780): run_atlas exited; CPU time 36241.160894
09:50:49 (1858780): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN