Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:02:19 (4053199): wrapper (7.7.26015): starting
00:02:19 (4053199): wrapper: running run_atlas (--nthreads 8)
[2026-01-24 00:02:19] Arguments: --nthreads 8
[2026-01-24 00:02:19] Threads: 8
[2026-01-24 00:02:19] Checking for CVMFS
[2026-01-24 00:02:20] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-24 00:02:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-24 00:02:21] Running cvmfs_config stat atlas.cern.ch
[2026-01-24 00:02:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-24 00:02:22] 2.13.3.0 9255 42660 363312 155460 3 386 31688952 39288833 14398 16776704 0 40386452 99.372 67531741 33281 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-24 00:02:22] CVMFS is ok
[2026-01-24 00:02:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-24 00:02:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-24 00:02:22] Further information can be found at the LHC@home message board.
[2026-01-24 00:02:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-24 00:02:22] Checking for apptainer binary...
[2026-01-24 00:02:22] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-24 00:02:22] Running /usr/bin/apptainer --version
[2026-01-24 00:02:22] apptainer version 1.4.5-2.el9
[2026-01-24 00:02:22] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-24 00:02:23] c-211-24.aglt2.org
[2026-01-24 00:02:23] apptainer works
[2026-01-24 00:02:23] Set ATHENA_PROC_NUMBER=8
[2026-01-24 00:02:23] Set ATHENA_CORE_NUMBER=8
[2026-01-24 00:02:23] Starting ATLAS job with PandaID=6979414937
[2026-01-24 00:02:23] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-24 21:43:46]  *** The last 200 lines of the pilot log: ***
[2026-01-24 21:43:46] 2026-01-25 02:43:02,261 | INFO     | sum of deviations: 2227508301221.263
[2026-01-24 21:43:46] 2026-01-25 02:43:02,261 | INFO     | mean x: 1769269981.2379827
[2026-01-24 21:43:46] 2026-01-25 02:43:02,265 | INFO     | mean y: 2491350.525610717
[2026-01-24 21:43:46] 2026-01-25 02:43:02,265 | INFO     | intersect: -6217226555.60513
[2026-01-24 21:43:46] 2026-01-25 02:43:02,267 | INFO     | chi2: 10.378248672007103
[2026-01-24 21:43:46] 2026-01-25 02:43:02,267 | INFO     | current chi2=10.378248672007103 (change=6.379485142694151 %)
[2026-01-24 21:43:46] 2026-01-25 02:43:02,267 | INFO     | right removable region: 1268
[2026-01-24 21:43:46] 2026-01-25 02:43:02,273 | INFO     | sum of square deviations: 633639749196.1298
[2026-01-24 21:43:46] 2026-01-25 02:43:02,627 | INFO     | sum of deviations: 1710086797280.5427
[2026-01-24 21:43:46] 2026-01-25 02:43:02,643 | INFO     | mean x: 1769270286.2379827
[2026-01-24 21:43:46] 2026-01-25 02:43:02,644 | INFO     | mean y: 2498898.7895981087
[2026-01-24 21:43:46] 2026-01-25 02:43:02,644 | INFO     | intersect: -4772463153.630236
[2026-01-24 21:43:46] 2026-01-25 02:43:02,645 | INFO     | chi2: 6.679345244494091
[2026-01-24 21:43:46] 2026-01-25 02:43:02,646 | INFO     | current chi2=6.679345244494091 (change=39.74669903739167 %)
[2026-01-24 21:43:46] 2026-01-25 02:43:02,661 | INFO     | sum of square deviations: 626179095150.798
[2026-01-24 21:43:46] 2026-01-25 02:43:02,958 | INFO     | sum of deviations: 1348469426899.8213
[2026-01-24 21:43:46] 2026-01-25 02:43:02,958 | INFO     | mean x: 1769270438.737342
[2026-01-24 21:43:46] 2026-01-25 02:43:02,958 | INFO     | mean y: 2506289.5356012657
[2026-01-24 21:43:46] 2026-01-25 02:43:02,959 | INFO     | intersect: -3807597102.658262
[2026-01-24 21:43:46] 2026-01-25 02:43:02,980 | INFO     | chi2: 3.860435907962824
[2026-01-24 21:43:46] 2026-01-25 02:43:02,981 | INFO     | current chi2=3.860435907962824 (change=42.20337822565688 %)
[2026-01-24 21:43:46] 2026-01-25 02:43:02,982 | INFO     | sum of square deviations: 618776847870.0778
[2026-01-24 21:43:46] 2026-01-25 02:43:03,389 | INFO     | sum of deviations: 1058137199831.6301
[2026-01-24 21:43:46] 2026-01-25 02:43:03,389 | INFO     | mean x: 1769270591.240667
[2026-01-24 21:43:46] 2026-01-25 02:43:03,389 | INFO     | mean y: 2512270.0111199366
[2026-01-24 21:43:46] 2026-01-25 02:43:03,389 | INFO     | intersect: -3023022760.273233
[2026-01-24 21:43:46] 2026-01-25 02:43:03,391 | INFO     | chi2: 2.082549191842627
[2026-01-24 21:43:46] 2026-01-25 02:43:03,391 | INFO     | current chi2=2.082549191842627 (change=46.054040489391234 %)
[2026-01-24 21:43:46] 2026-01-25 02:43:03,417 | INFO     | sum of square deviations: 611433390226.2831
[2026-01-24 21:43:46] 2026-01-25 02:43:04,416 | INFO     | sum of deviations: 896919382674.7847
[2026-01-24 21:43:46] 2026-01-25 02:43:04,422 | INFO     | mean x: 1769270743.7416267
[2026-01-24 21:43:46] 2026-01-25 02:43:04,422 | INFO     | mean y: 2515617.360446571
[2026-01-24 21:43:46] 2026-01-25 02:43:04,423 | INFO     | intersect: -2592850040.825165
[2026-01-24 21:43:46] 2026-01-25 02:43:04,424 | INFO     | chi2: 1.5617514764402647
[2026-01-24 21:43:46] 2026-01-25 02:43:04,425 | INFO     | current chi2=1.5617514764402647 (change=25.007702936494073 %)
[2026-01-24 21:43:46] 2026-01-25 02:43:04,459 | INFO     | sum of square deviations: 604148410772.4614
[2026-01-24 21:43:46] 2026-01-25 02:43:04,697 | INFO     | monitor loop #3805: job 0:6979414937 is in state 'finished'
[2026-01-24 21:43:46] 2026-01-25 02:43:04,697 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-24 21:43:46] 2026-01-25 02:43:04,937 | INFO     | sum of deviations: 765263924011.5563
[2026-01-24 21:43:46] 2026-01-25 02:43:04,937 | INFO     | mean x: 1769270896.2409928
[2026-01-24 21:43:46] 2026-01-25 02:43:04,937 | INFO     | mean y: 2518372.9383506807
[2026-01-24 21:43:46] 2026-01-25 02:43:04,937 | INFO     | intersect: -2238585244.243492
[2026-01-24 21:43:46] 2026-01-25 02:43:04,980 | INFO     | chi2: 1.2232594448015344
[2026-01-24 21:43:46] 2026-01-25 02:43:04,981 | INFO     | current chi2=1.2232594448015344 (change=21.673873003806136 %)
[2026-01-24 21:43:46] 2026-01-25 02:43:04,981 | INFO     | left removable region: 50
[2026-01-24 21:43:46] 2026-01-25 02:43:04,982 | INFO     | sum of square deviations: 560269679594.8743
[2026-01-24 21:43:46] 2026-01-25 02:43:05,827 | INFO     | sum of deviations: 527551839101.5983
[2026-01-24 21:43:46] 2026-01-25 02:43:05,827 | INFO     | mean x: 1769271475.7356322
[2026-01-24 21:43:46] 2026-01-25 02:43:05,827 | INFO     | mean y: 2526703.3341543516
[2026-01-24 21:43:46] 2026-01-25 02:43:05,827 | INFO     | intersect: -1663425345.9883285
[2026-01-24 21:43:46] 2026-01-25 02:43:05,829 | INFO     | chi2: 0.01213784369484409
[2026-01-24 21:43:46] 2026-01-25 02:43:05,829 | INFO     | current memory leak: 0.94 B/s (using 1218 data points, chi2=0.01)
[2026-01-24 21:43:46] 2026-01-25 02:43:05,881 | INFO     | could have reported an average CPU frequency of 2899 MHz (46 samples)
[2026-01-24 21:43:46] 2026-01-25 02:43:05,882 | INFO     | ..............................
[2026-01-24 21:43:46] 2026-01-25 02:43:05,882 | INFO     | . Timing measurements:
[2026-01-24 21:43:46] 2026-01-25 02:43:05,882 | INFO     | . get job = 1 s
[2026-01-24 21:43:46] 2026-01-25 02:43:05,882 | INFO     | . initial setup = 66 s
[2026-01-24 21:43:46] 2026-01-25 02:43:05,882 | INFO     | . payload setup = 80 s
[2026-01-24 21:43:46] 2026-01-25 02:43:05,882 | INFO     | . stage-in = 1 s
[2026-01-24 21:43:46] 2026-01-25 02:43:05,883 | INFO     | . payload execution = 77722 s
[2026-01-24 21:43:46] 2026-01-25 02:43:05,883 | INFO     | . stage-out = 5 s
[2026-01-24 21:43:46] 2026-01-25 02:43:05,883 | INFO     | . log creation = 1 s
[2026-01-24 21:43:46] 2026-01-25 02:43:05,883 | INFO     | ..............................
[2026-01-24 21:43:46] 2026-01-25 02:43:08,482 | INFO     | 
[2026-01-24 21:43:46] 2026-01-25 02:43:08,482 | INFO     | job summary report
[2026-01-24 21:43:46] 2026-01-25 02:43:08,482 | INFO     | --------------------------------------------------
[2026-01-24 21:43:46] 2026-01-25 02:43:08,483 | INFO     | PanDA job id: 6979414937
[2026-01-24 21:43:46] 2026-01-25 02:43:08,483 | INFO     | task id: 48299685
[2026-01-24 21:43:46] 2026-01-25 02:43:08,483 | INFO     | errors: (none)
[2026-01-24 21:43:46] 2026-01-25 02:43:08,483 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-24 21:43:46] 2026-01-25 02:43:08,483 | INFO     | pilot state: finished 
[2026-01-24 21:43:46] 2026-01-25 02:43:08,483 | INFO     | transexitcode: 0
[2026-01-24 21:43:46] 2026-01-25 02:43:08,483 | INFO     | exeerrorcode: 0
[2026-01-24 21:43:46] 2026-01-25 02:43:08,484 | INFO     | exeerrordiag: 
[2026-01-24 21:43:46] 2026-01-25 02:43:08,484 | INFO     | exitcode: 0
[2026-01-24 21:43:46] 2026-01-25 02:43:08,484 | INFO     | exitmsg: OK
[2026-01-24 21:43:46] 2026-01-25 02:43:08,484 | INFO     | cpuconsumptiontime: 102511 s
[2026-01-24 21:43:46] 2026-01-25 02:43:08,484 | INFO     | nevents: 400
[2026-01-24 21:43:46] 2026-01-25 02:43:08,484 | INFO     | neventsw: 0
[2026-01-24 21:43:46] 2026-01-25 02:43:08,484 | INFO     | pid: 4089892
[2026-01-24 21:43:46] 2026-01-25 02:43:08,485 | INFO     | pgrp: 4089892
[2026-01-24 21:43:46] 2026-01-25 02:43:08,485 | INFO     | corecount: 8
[2026-01-24 21:43:46] 2026-01-25 02:43:08,485 | INFO     | event service: False
[2026-01-24 21:43:46] 2026-01-25 02:43:08,485 | INFO     | sizes: {0: 2283863, 1: 2283863, 3: 2283891, 5: 2283891, 6: 2284408, 18: 2284408, 77807: 2342689, 77808: 2342688, 77814: 2351742, 77817: 2351798, 77828: 2351992}
[2026-01-24 21:43:46] 2026-01-25 02:43:08,485 | INFO     | --------------------------------------------------
[2026-01-24 21:43:46] 2026-01-25 02:43:08,485 | INFO     | 
[2026-01-24 21:43:46] 2026-01-25 02:43:08,485 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-01-24 21:43:46] 2026-01-25 02:43:08,709 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-24 21:43:46] 2026-01-25 02:43:08,709 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-24 21:43:46] 2026-01-25 02:43:08,710 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-24 21:43:46] 2026-01-25 02:43:08,710 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-24 21:43:46] 2026-01-25 02:43:08,710 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-24 21:43:46] 2026-01-25 02:43:08,710 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-24 21:43:46] 2026-01-25 02:43:08,710 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-24 21:43:46] 2026-01-25 02:43:08,710 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-24 21:43:46] 2026-01-25 02:43:08,711 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-24 21:43:46] 2026-01-25 02:43:08,711 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-24 21:43:46] 2026-01-25 02:43:08,711 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-24 21:43:46] 2026-01-25 02:43:08,711 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-24 21:43:46] 2026-01-25 02:43:08,711 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-24 21:43:46] 2026-01-25 02:43:08,712 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-24 21:43:46] 2026-01-25 02:43:08,712 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-24 21:43:46] 2026-01-25 02:43:08,712 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-24 21:43:46] 2026-01-25 02:43:08,712 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-24 21:43:46] 2026-01-25 02:43:08,712 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-24 21:43:46] 2026-01-25 02:43:08,713 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-24 21:43:46] 2026-01-25 02:43:08,713 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-24 21:43:46] 2026-01-25 02:43:08,713 | INFO     | job 6979414937 has completed (purged errors)
[2026-01-24 21:43:46] 2026-01-25 02:43:08,713 | INFO     | overall cleanup function is called
[2026-01-24 21:43:46] 2026-01-25 02:43:08,996 | INFO     | PID=4066498 has CPU usage=13.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-01-24 21:43:46] 2026-01-25 02:43:08,996 | INFO     | .. there are 19 such processes running
[2026-01-24 21:43:46] 2026-01-25 02:43:09,723 | INFO     | --- collectZombieJob: --- 10, [4089892]
[2026-01-24 21:43:46] 2026-01-25 02:43:09,723 | INFO     | zombie collector waiting for pid 4089892
[2026-01-24 21:43:46] 2026-01-25 02:43:09,804 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-24 21:43:46] 2026-01-25 02:43:09,804 | INFO     | collected zombie processes
[2026-01-24 21:43:46] 2026-01-25 02:43:09,805 | INFO     | will attempt to kill all subprocesses of pid=4089892
[2026-01-24 21:43:46] 2026-01-25 02:43:11,663 | INFO     | process IDs to be killed: [4089892] (in reverse order)
[2026-01-24 21:43:46] 2026-01-25 02:43:12,167 | WARNING  | found no corresponding commands to process id(s)
[2026-01-24 21:43:46] 2026-01-25 02:43:12,182 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-24 21:43:46] 2026-01-25 02:43:12,310 | INFO     | did not find any defunct processes belonging to 4089892
[2026-01-24 21:43:46] 2026-01-25 02:43:12,349 | INFO     | did not find any defunct processes belonging to 4089892
[2026-01-24 21:43:46] 2026-01-25 02:43:12,349 | INFO     | ready for new job
[2026-01-24 21:43:46] 2026-01-25 02:43:12,349 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-24 21:43:46] 2026-01-25 02:43:12,401 | INFO     | **************************************
[2026-01-24 21:43:46] 2026-01-25 02:43:12,402 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-24 21:43:46] 2026-01-25 02:43:12,402 | INFO     | **************************************
[2026-01-24 21:43:46] 2026-01-25 02:43:12,403 | INFO     | 
[2026-01-24 21:43:46] 2026-01-25 02:43:12,478 | INFO     | architecture information:
[2026-01-24 21:43:46] 2026-01-25 02:43:12,489 | INFO     | executing command: cat /etc/os-release
[2026-01-24 21:43:46] 2026-01-25 02:43:12,630 | INFO     | cat /etc/os-release:
[2026-01-24 21:43:46] NAME="CentOS Linux"
[2026-01-24 21:43:46] VERSION="7 (Core)"
[2026-01-24 21:43:46] ID="centos"
[2026-01-24 21:43:46] ID_LIKE="rhel fedora"
[2026-01-24 21:43:46] VERSION_ID="7"
[2026-01-24 21:43:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-24 21:43:46] ANSI_COLOR="0;31"
[2026-01-24 21:43:46] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-24 21:43:46] HOME_URL="https://www.centos.org/"
[2026-01-24 21:43:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-24 21:43:46] 
[2026-01-24 21:43:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-24 21:43:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-24 21:43:46] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-24 21:43:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-24 21:43:46] 
[2026-01-24 21:43:46] 2026-01-25 02:43:12,630 | INFO     | **************************************
[2026-01-24 21:43:46] 2026-01-25 02:43:13,133 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-01-24 21:43:46] 2026-01-25 02:43:13,344 | INFO     | sufficient remaining disk space (52765392896 B)
[2026-01-24 21:43:46] 2026-01-25 02:43:13,344 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-24 21:43:46] 2026-01-25 02:43:13,344 | INFO     | current server update state: UPDATING_FINAL
[2026-01-24 21:43:46] 2026-01-25 02:43:13,345 | INFO     | update_server=False
[2026-01-24 21:43:46] 2026-01-25 02:43:13,345 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-24 21:43:46] 2026-01-25 02:43:13,346 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-24 21:43:46] 2026-01-25 02:43:13,541 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-24 21:43:46] 2026-01-25 02:43:13,542 | INFO     | aborting loop
[2026-01-24 21:43:46] 2026-01-25 02:43:13,545 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-24 21:43:46] 2026-01-25 02:43:13,604 | INFO     | all data control threads have been joined
[2026-01-24 21:43:46] 2026-01-25 02:43:13,622 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-24 21:43:46] 2026-01-25 02:43:13,962 | INFO     | all payload control threads have been joined
[2026-01-24 21:43:46] 2026-01-25 02:43:14,353 | INFO     | [job] retrieve thread has finished
[2026-01-24 21:43:46] 2026-01-25 02:43:14,547 | INFO     | [job] job monitor thread has finished
[2026-01-24 21:43:46] 2026-01-25 02:43:14,559 | INFO     | [job] queue monitor thread has finished
[2026-01-24 21:43:46] 2026-01-25 02:43:14,620 | INFO     | all job control threads have been joined
[2026-01-24 21:43:46] 2026-01-25 02:43:14,621 | INFO     | [data] control thread has finished
[2026-01-24 21:43:46] 2026-01-25 02:43:14,904 | INFO     | [job] create_data_payload thread has finished
[2026-01-24 21:43:46] 2026-01-25 02:43:14,914 | INFO     | [payload] validate_pre thread has finished
[2026-01-24 21:43:46] 2026-01-25 02:43:14,968 | INFO     | [payload] control thread has finished
[2026-01-24 21:43:46] 2026-01-25 02:43:15,292 | INFO     | [payload] failed_post thread has finished
[2026-01-24 21:43:46] 2026-01-25 02:43:15,347 | INFO     | [payload] validate_post thread has finished
[2026-01-24 21:43:46] 2026-01-25 02:43:15,512 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-24 21:43:46] 2026-01-25 02:43:15,584 | INFO     | [data] copytool_in thread has finished
[2026-01-24 21:43:46] 2026-01-25 02:43:15,626 | INFO     | [job] control thread has finished
[2026-01-24 21:43:46] 2026-01-25 02:43:15,629 | INFO     | [data] copytool_out thread has finished
[2026-01-24 21:43:46] 2026-01-25 02:43:15,803 | INFO     | [payload] execute_payloads thread has finished
[2026-01-24 21:43:46] 2026-01-25 02:43:15,839 | INFO     | [job] validate thread has finished
[2026-01-24 21:43:46] 2026-01-25 02:43:17,367 | INFO     | [data] queue_monitor thread has finished
[2026-01-24 21:43:46] 2026-01-25 02:43:19,589 | INFO     | [monitor] cgroup control has ended
[2026-01-24 21:43:46] 2026-01-25 02:43:19,672 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139833807185728)>', '<ExcThread(monitor, started 139833439667968)>']
[2026-01-24 21:43:46] 2026-01-25 02:43:24,699 | INFO     | all workflow threads have been joined
[2026-01-24 21:43:46] 2026-01-25 02:43:24,699 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-24 21:43:46] 2026-01-25 02:43:24,700 | INFO     | traces error code: 0
[2026-01-24 21:43:46] 2026-01-25 02:43:24,700 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-24 21:43:46] 2026-01-25 02:43:43,437 | INFO     | PID=4066498 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-24 21:43:46] 2026-01-25 02:43:43,439 | INFO     | .. there are 19 such processes running
[2026-01-24 21:43:46] 2026-01-25 02:43:43,446 | INFO     | found 0 job(s) in 20 queues
[2026-01-24 21:43:46] 2026-01-25 02:43:43,447 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-24 21:43:46] 2026-01-25 02:43:43,447 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-24 21:43:46] 2026-01-25 02:43:43,447 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-24 21:43:46] 2026-01-25 02:43:43,447 | INFO     | [monitor] control thread has ended
[2026-01-24 21:43:46] 2026-01-25 02:43:45,451 [wrapper] ==== pilot stdout END ====
[2026-01-24 21:43:46] 2026-01-25 02:43:45,476 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-24 21:43:46] 2026-01-25 02:43:45,479 [wrapper] pilotpid: 4066498
[2026-01-24 21:43:46] 2026-01-25 02:43:45,485 [wrapper] Pilot exit status: 0
[2026-01-24 21:43:46] 2026-01-25 02:43:45,635 [wrapper] pandaids: 6979414937
[2026-01-24 21:43:46] 2026-01-25 02:43:45,733 [wrapper] cleanup supervisor_pilot  406414 4066499
[2026-01-24 21:43:46] 2026-01-25 02:43:45,773 [wrapper] Test setup, not cleaning
[2026-01-24 21:43:46] 2026-01-25 02:43:45,810 [wrapper] apfmon messages muted
[2026-01-24 21:43:46] 2026-01-25 02:43:45,892 [wrapper] ==== wrapper stdout END ====
[2026-01-24 21:43:46] 2026-01-25 02:43:45,895 [wrapper] ==== wrapper stderr END ====
[2026-01-24 21:43:46]  *** Error codes and diagnostics ***
[2026-01-24 21:43:46]     "exeErrorCode": 0,
[2026-01-24 21:43:46]     "exeErrorDiag": "",
[2026-01-24 21:43:46]     "pilotErrorCode": 0,
[2026-01-24 21:43:46]     "pilotErrorDiag": "",
[2026-01-24 21:43:46]  *** Listing of results directory ***
[2026-01-24 21:43:46] total 435904
[2026-01-24 21:43:46] -rw-r--r--. 1 boincer umatlas    584422 Jan 23 12:42 pilot3.tar.gz
[2026-01-24 21:43:46] -rw-r--r--. 1 boincer umatlas      5111 Jan 23 12:43 queuedata.json
[2026-01-24 21:43:46] -rwx------. 1 boincer umatlas     36322 Jan 23 12:43 runpilot2-wrapper.sh
[2026-01-24 21:43:46] -rw-r--r--. 1 boincer umatlas       100 Jan 24 00:02 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-24 21:43:46] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 24 00:02 run_atlas
[2026-01-24 21:43:46] -rw-r--r--. 1 boincer umatlas       105 Jan 24 00:02 job.xml
[2026-01-24 21:43:46] -rw-r--r--. 2 boincer umatlas 250693673 Jan 24 00:02 EVNT.48299683._000006.pool.root.1
[2026-01-24 21:43:46] drwxrwx--x. 2 boincer umatlas      4096 Jan 24 00:02 shared
[2026-01-24 21:43:46] -rw-r--r--. 2 boincer umatlas    597798 Jan 24 00:02 input.tar.gz
[2026-01-24 21:43:46] -rw-r--r--. 2 boincer umatlas     15845 Jan 24 00:02 start_atlas.sh
[2026-01-24 21:43:46] -rw-r--r--. 1 boincer umatlas         0 Jan 24 00:02 boinc_lockfile
[2026-01-24 21:43:46] -rw-r--r--. 1 boincer umatlas      2642 Jan 24 00:02 pandaJob.out
[2026-01-24 21:43:46] -rw-------. 1 boincer umatlas        57 Jan 24 00:02 setup.sh.local
[2026-01-24 21:43:46] -rw-------. 1 boincer umatlas       442 Jan 24 00:05 workernode_map.json
[2026-01-24 21:43:46] -rw-------. 1 boincer umatlas   1004238 Jan 24 00:05 agis_schedconf.cvmfs.json
[2026-01-24 21:43:46] drwx------. 5 boincer umatlas      4096 Jan 24 00:05 pilot3
[2026-01-24 21:43:46] -rw-r--r--. 1 boincer umatlas      6526 Jan 24 21:37 init_data.xml
[2026-01-24 21:43:46] -rw-------. 1 boincer umatlas 172248560 Jan 24 21:41 HITS.48299685._000503.pool.root.1
[2026-01-24 21:43:46] -rw-r--r--. 1 boincer umatlas       532 Jan 24 21:42 boinc_task_state.xml
[2026-01-24 21:43:46] -rw-------. 1 boincer umatlas      1039 Jan 24 21:42 memory_monitor_summary.json
[2026-01-24 21:43:46] -rw-------. 1 boincer umatlas   1516246 Jan 24 21:42 agis_ddmendpoints.agis.ALL.json
[2026-01-24 21:43:46] -rw-------. 1 boincer umatlas   1187510 Jan 24 21:42 log.48299685._000503.job.log.tgz.1
[2026-01-24 21:43:46] -rw-------. 1 boincer umatlas      6381 Jan 24 21:43 heartbeat.json
[2026-01-24 21:43:46] -rw-r--r--. 1 boincer umatlas        29 Jan 24 21:43 wrapper_checkpoint.txt
[2026-01-24 21:43:46] -rw-r--r--. 1 boincer umatlas      8192 Jan 24 21:43 boinc_mmap_file
[2026-01-24 21:43:46] -rw-------. 1 boincer umatlas        95 Jan 24 21:43 pilot_heartbeat.json
[2026-01-24 21:43:46] -rw-------. 1 boincer umatlas       823 Jan 24 21:43 pilotlog.txt
[2026-01-24 21:43:46] -rw-------. 1 boincer umatlas   8558462 Jan 24 21:43 log.48299685._000503.job.log.1
[2026-01-24 21:43:46] -rw-------. 1 boincer umatlas       357 Jan 24 21:43 output.list
[2026-01-24 21:43:46] -rw-r--r--. 1 boincer umatlas       620 Jan 24 21:43 runtime_log
[2026-01-24 21:43:46] -rw-------. 1 boincer umatlas   9758720 Jan 24 21:43 result.tar.gz
[2026-01-24 21:43:46] -rw-r--r--. 1 boincer umatlas      9342 Jan 24 21:43 runtime_log.err
[2026-01-24 21:43:46] -rw-------. 1 boincer umatlas       659 Jan 24 21:43 jJRKDm2Ma38n9Rq4apOajLDm4fhM0noT9bVo0NGKDmsZwKDmAejcQo.diag
[2026-01-24 21:43:46] -rw-r--r--. 1 boincer umatlas     21247 Jan 24 21:43 stderr.txt
[2026-01-24 21:43:46] HITS file was successfully produced:
[2026-01-24 21:43:46] -rw-------. 1 boincer umatlas 172248560 Jan 24 21:41 shared/HITS.pool.root.1
[2026-01-24 21:43:46]  *** Contents of shared directory: ***
[2026-01-24 21:43:46] total 423168
[2026-01-24 21:43:46] -rw-r--r--. 2 boincer umatlas 250693673 Jan 24 00:02 ATLAS.root_0
[2026-01-24 21:43:46] -rw-r--r--. 2 boincer umatlas    597798 Jan 24 00:02 input.tar.gz
[2026-01-24 21:43:46] -rw-r--r--. 2 boincer umatlas     15845 Jan 24 00:02 start_atlas.sh
[2026-01-24 21:43:46] -rw-------. 1 boincer umatlas 172248560 Jan 24 21:41 HITS.pool.root.1
[2026-01-24 21:43:46] -rw-------. 1 boincer umatlas   9758720 Jan 24 21:43 result.tar.gz
21:43:47 (4053199): run_atlas exited; CPU time 106061.964666
21:43:47 (4053199): called boinc_finish(0)

</stderr_txt>
]]>

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