Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
2026-01-23 11:48:06 (12924): vboxwrapper version 26210
2026-01-23 11:48:06 (12924): BOINC client version: 8.2.8
2026-01-23 11:48:30 (12924): Detected: VirtualBox VboxManage Interface (Version: 7.1.10)
2026-01-23 11:48:31 (12924): Successfully copied 'init_data.xml' to the shared directory.
2026-01-23 11:48:31 (12924): Create VM. (boinc_f58734ad1a981c0e, slot#5)
2026-01-23 11:48:32 (12924): Setting Memory Size for VM. (4300MB)
2026-01-23 11:48:32 (12924): Setting CPU Count for VM. (3)
2026-01-23 11:48:32 (12924): Setting Chipset Options for VM.
2026-01-23 11:48:33 (12924): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2026-01-23 11:48:33 (12924): Setting Boot Options for VM.
2026-01-23 11:48:33 (12924): Setting Network Configuration for NAT. (Driver: virtio)
2026-01-23 11:48:34 (12924): Enabling VM Network Access.
2026-01-23 11:48:34 (12924): Disabling USB Support for VM.
2026-01-23 11:48:34 (12924): Disabling COM Port Support for VM.
2026-01-23 11:48:34 (12924): Disabling LPT Port Support for VM.
2026-01-23 11:48:35 (12924): Disabling Audio Support for VM.
2026-01-23 11:48:35 (12924): Disabling Clipboard Support for VM.
2026-01-23 11:48:35 (12924): Disabling Drag and Drop Support for VM.
2026-01-23 11:48:36 (12924): Adding storage controller(s) to VM.
2026-01-23 11:48:36 (12924): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2026-01-23 11:48:38 (12924): Adding VirtualBox Guest Additions to VM.
2026-01-23 11:48:38 (12924): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2026-01-23 11:48:39 (12924): forwarding host port 58895 to guest port 80
2026-01-23 11:48:39 (12924): Enabling remote desktop for VM.
2026-01-23 11:48:40 (12924): Enabling shared directory for VM.
2026-01-23 11:48:41 (12924): Starting VM using VBoxManage interface. (boinc_f58734ad1a981c0e, slot#5)
2026-01-23 11:48:50 (12924): Successfully started VM. (PID = '14504')
2026-01-23 11:48:50 (12924): Reporting VM Process ID to BOINC.
2026-01-23 11:48:50 (12924): Guest Log: BIOS: VirtualBox 7.1.10
2026-01-23 11:48:50 (12924): Guest Log: CPUID EDX: 0x178bfbff
2026-01-23 11:48:50 (12924): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2026-01-23 11:48:50 (12924): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2026-01-23 11:48:50 (12924): VM state change detected. (old = 'poweredoff', new = 'running')
2026-01-23 11:48:50 (12924): Detected: Web Application Enabled (http://localhost:58895)
2026-01-23 11:48:50 (12924): Detected: Remote Desktop Enabled (localhost:58897)
2026-01-23 11:48:50 (12924): Preference change detected
2026-01-23 11:48:50 (12924): Setting CPU throttle for VM. (100%)
2026-01-23 11:48:50 (12924): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2026-01-23 11:48:52 (12924): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2026-01-23 11:48:52 (12924): Guest Log: BIOS: Booting from Hard Disk...
2026-01-23 11:48:55 (12924): Guest Log: BIOS: KBD: unsupported int 16h function 03
2026-01-23 11:48:55 (12924): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2026-01-23 11:48:55 (12924): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2026-01-23 11:48:55 (12924): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2026-01-23 11:48:55 (12924): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2026-01-23 11:48:55 (12924): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2026-01-23 11:48:55 (12924): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2026-01-23 11:48:55 (12924): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2026-01-23 11:48:55 (12924): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2026-01-23 11:48:55 (12924): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2026-01-23 11:48:55 (12924): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2026-01-23 11:48:55 (12924): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2026-01-23 11:48:55 (12924): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2026-01-23 11:48:55 (12924): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2026-01-23 11:48:55 (12924): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2026-01-23 11:48:55 (12924): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2026-01-23 11:48:55 (12924): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2026-01-23 11:48:55 (12924): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2026-01-23 11:48:55 (12924): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2026-01-23 11:48:55 (12924): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2026-01-23 11:48:55 (12924): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2026-01-23 11:48:55 (12924): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2026-01-23 11:48:55 (12924): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2026-01-23 11:48:55 (12924): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2026-01-23 11:48:55 (12924): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2026-01-23 11:48:55 (12924): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2026-01-23 11:48:55 (12924): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2026-01-23 11:48:55 (12924): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2026-01-23 11:48:55 (12924): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2026-01-23 11:48:55 (12924): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2026-01-23 11:48:55 (12924): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2026-01-23 11:48:55 (12924): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2026-01-23 11:49:00 (12924): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2026-01-23 11:49:00 (12924): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2026-01-23 11:49:11 (12924): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2026-01-23 11:49:11 (12924): Guest Log: 00:00:00.000215 main     Log opened 2026-01-23T11:49:09.563629000Z
2026-01-23 11:49:11 (12924): Guest Log: 00:00:00.000416 main     OS Product: Linux
2026-01-23 11:49:11 (12924): Guest Log: 00:00:00.000486 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2026-01-23 11:49:11 (12924): Guest Log: 00:00:00.000543 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2026-01-23 11:49:11 (12924): Guest Log: 00:00:00.000601 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2026-01-23 11:49:11 (12924): Guest Log: 00:00:00.000602 main     Process ID: 1297
2026-01-23 11:49:11 (12924): Guest Log: 00:00:00.000604 main     Package type: LINUX_64BITS_GENERIC
2026-01-23 11:49:11 (12924): Guest Log: 00:00:00.001802 main     5.2.32 r132073 started. Verbose level = 0
2026-01-23 11:49:11 (12924): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2026-01-23 11:49:11 (12924): Guest Log: [INFO] Mounting shared directory
2026-01-23 11:49:11 (12924): Guest Log: [INFO] Checking for init_data.xml
2026-01-23 11:49:18 (12924): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2026-01-23 11:49:18 (12924): Guest Log: [INFO] Detected branch: prod
2026-01-23 11:49:18 (12924): Guest Log: This is the prod version of the ATLAS job wrapper
2026-01-23 11:49:18 (12924): Guest Log: Copying input files
2026-01-23 11:49:20 (12924): Guest Log: Copied input files into RunAtlas.
2026-01-23 11:49:21 (12924): Guest Log: This VM did not configure a local http proxy via BOINC.
2026-01-23 11:49:21 (12924): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2026-01-23 11:49:21 (12924): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2026-01-23 11:49:21 (12924): Guest Log: Further information can be found at the LHC@home message board.
2026-01-23 11:49:21 (12924): Guest Log: 00:00:10.021724 timesync vgsvcTimeSyncWorker: Radical guest time change: 28 811 600 782 000ns (GuestNow=1 769 197 761 169 934 000 ns GuestLast=1 769 168 949 569 152 000 ns fSetTimeLastLoop=true )
2026-01-23 11:49:30 (12924): Guest Log: Running cvmfs_config stat atlas.cern.ch
2026-01-23 11:49:31 (12924): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2026-01-23 11:49:31 (12924): Guest Log: 2.6.3.0 1577 0 32216 155447 4 1 3117737 4096000 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2026-01-23 11:49:32 (12924): Guest Log: copied the webapp to /var/www
2026-01-23 11:49:32 (12924): Guest Log: ATHENA_PROC_NUMBER=3
2026-01-23 11:49:32 (12924): Guest Log: ATHENA_CORE_NUMBER=3
2026-01-23 11:49:32 (12924): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2026-01-23 11:49:32 (12924): Guest Log:  *** Starting ATLAS job. (PandaID=6980375248 taskID=48314293) ***
2026-01-23 13:52:40 (12924): Status Report: Elapsed Time: '6000.148886'
2026-01-23 13:52:40 (12924): Status Report: CPU Time: '20068.343750'
2026-01-23 16:03:02 (12924): Status Report: Elapsed Time: '12000.543715'
2026-01-23 16:03:02 (12924): Status Report: CPU Time: '43339.468750'
2026-01-23 18:11:39 (12924): Status Report: Elapsed Time: '18001.049513'
2026-01-23 18:11:40 (12924): Status Report: CPU Time: '66297.984375'
2026-01-23 20:24:05 (12924): Status Report: Elapsed Time: '24001.796349'
2026-01-23 20:24:05 (12924): Status Report: CPU Time: '89976.484375'
2026-01-23 22:33:12 (12924): Status Report: Elapsed Time: '30003.995485'
2026-01-23 22:33:12 (12924): Status Report: CPU Time: '113038.687500'
2026-01-24 00:00:17 (12924): Guest Log:  *** Job finished ***
2026-01-24 00:00:17 (12924): Guest Log:  *** The last 20 lines of the pilot log: ***
2026-01-24 00:00:17 (12924): Guest Log: 2026-01-24 07:59:55,074 | INFO     | [payload] failed_post thread has finished
2026-01-24 00:00:17 (12924): Guest Log: 2026-01-24 07:59:56,660 | INFO     | [data] queue_monitor thread has finished
2026-01-24 00:00:17 (12924): Guest Log: 2026-01-24 08:00:09,503 | INFO     | [monitor] cgroup control has ended
2026-01-24 00:00:17 (12924): Guest Log: 2026-01-24 08:00:10,051 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140034792814400)>', '<ExcThread(monitor, started 140034363606784)>']
2026-01-24 00:00:17 (12924): Guest Log: 2026-01-24 08:00:10,934 | WARNING  | job_aborted has been set - aborting pilot monitoring
2026-01-24 00:00:17 (12924): Guest Log: 2026-01-24 08:00:10,935 | INFO     | [monitor] control thread has ended
2026-01-24 00:00:17 (12924): Guest Log: 2026-01-24 08:00:15,058 | INFO     | all workflow threads have been joined
2026-01-24 00:00:17 (12924): Guest Log: 2026-01-24 08:00:15,058 | INFO     | end of generic workflow (traces error code: 0)
2026-01-24 00:00:17 (12924): Guest Log: 2026-01-24 08:00:15,058 | INFO     | traces error code: 0
2026-01-24 00:00:17 (12924): Guest Log: 2026-01-24 08:00:15,059 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2026-01-24 00:00:17 (12924): Guest Log: 2026-01-24 08:00:15,203 [wrapper] ==== pilot stdout END ====
2026-01-24 00:00:17 (12924): Guest Log: 2026-01-24 08:00:15,209 [wrapper] ==== wrapper stdout RESUME ====
2026-01-24 00:00:17 (12924): Guest Log: 2026-01-24 08:00:15,215 [wrapper] pilotpid: 5972
2026-01-24 00:00:17 (12924): Guest Log: 2026-01-24 08:00:15,223 [wrapper] Pilot exit status: 0
2026-01-24 00:00:17 (12924): Guest Log: 2026-01-24 08:00:15,703 [wrapper] pandaids: 6980375248
2026-01-24 00:00:17 (12924): Guest Log: 2026-01-24 08:00:15,757 [wrapper] cleanup supervisor_pilot  5069 5973
2026-01-24 00:00:17 (12924): Guest Log: 2026-01-24 08:00:15,769 [wrapper] Test setup, not cleaning
2026-01-24 00:00:17 (12924): Guest Log: 2026-01-24 08:00:15,778 [wrapper] apfmon messages muted
2026-01-24 00:00:17 (12924): Guest Log: 2026-01-24 08:00:15,786 [wrapper] ==== wrapper stdout END ====
2026-01-24 00:00:17 (12924): Guest Log: 2026-01-24 08:00:15,795 [wrapper] ==== wrapper stderr END ====
2026-01-24 00:00:17 (12924): Guest Log:  *** Error codes and diagnostics ***
2026-01-24 00:00:17 (12924): Guest Log:     "exeErrorCode": 0,
2026-01-24 00:00:17 (12924): Guest Log:     "exeErrorDiag": "",
2026-01-24 00:00:17 (12924): Guest Log:     "pilotErrorCode": 0,
2026-01-24 00:00:17 (12924): Guest Log:     "pilotErrorDiag": "",
2026-01-24 00:00:17 (12924): Guest Log:  *** Listing of results directory ***
2026-01-24 00:00:17 (12924): Guest Log: total 186092
2026-01-24 00:00:17 (12924): Guest Log: -rw-r--r--. 1 atlas atlas    584422 Jan 23 11:33 pilot3.tar.gz
2026-01-24 00:00:17 (12924): Guest Log: -rwx------. 1 atlas atlas     36322 Jan 23 11:35 runpilot2-wrapper.sh
2026-01-24 00:00:17 (12924): Guest Log: -rw-r--r--. 1 atlas atlas      5111 Jan 23 11:35 queuedata.json
2026-01-24 00:00:17 (12924): Guest Log: -rwxr-xr-x. 1 atlas atlas      8642 Jan 23 19:49 init_data.xml
2026-01-24 00:00:17 (12924): Guest Log: -rwxr-xr-x. 1 atlas atlas    597770 Jan 23 19:49 input.tar.gz
2026-01-24 00:00:17 (12924): Guest Log: -rwxr-xr-x. 1 atlas atlas     15845 Jan 23 19:49 start_atlas.sh
2026-01-24 00:00:17 (12924): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Jan 23 19:49 EVNT.48314291._000004.pool.root.1 -> /data/./ATLAS.root_0
2026-01-24 00:00:17 (12924): Guest Log: -rw-r--r--. 1 atlas atlas      2618 Jan 23 19:49 pandaJob.out
2026-01-24 00:00:17 (12924): Guest Log: -rw-------. 1 atlas atlas   1004238 Jan 23 19:51 agis_schedconf.cvmfs.json
2026-01-24 00:00:17 (12924): Guest Log: -rw-------. 1 atlas atlas       410 Jan 23 19:51 workernode_map.json
2026-01-24 00:00:17 (12924): Guest Log: drwx------. 5 atlas atlas      4096 Jan 23 19:51 pilot3
2026-01-24 00:00:17 (12924): Guest Log: -rw-------. 1 atlas atlas        95 Jan 24 07:58 pilot_heartbeat.json
2026-01-24 00:00:17 (12924): Guest Log: -rw-------. 1 atlas atlas 173186687 Jan 24 07:58 HITS.48314293._000076.pool.root.1
2026-01-24 00:00:17 (12924): Guest Log: -rw-------. 1 atlas atlas      1043 Jan 24 07:59 memory_monitor_summary.json
2026-01-24 00:00:17 (12924): Guest Log: -rw-------. 1 atlas atlas   1516246 Jan 24 07:59 agis_ddmendpoints.agis.ALL.json
2026-01-24 00:00:17 (12924): Guest Log: -rw-------. 1 atlas atlas    773073 Jan 24 07:59 log.48314293._000076.job.log.tgz.1
2026-01-24 00:00:17 (12924): Guest Log: -rw-------. 1 atlas atlas      6312 Jan 24 07:59 heartbeat.json
2026-01-24 00:00:17 (12924): Guest Log: -rw-------. 1 atlas atlas      4608 Jan 24 08:00 pilotlog.txt
2026-01-24 00:00:17 (12924): Guest Log: -rw-------. 1 atlas atlas   5978663 Jan 24 08:00 log.48314293._000076.job.log.1
2026-01-24 00:00:17 (12924): Guest Log: -rw-------. 1 atlas atlas       357 Jan 24 08:00 output.list
2026-01-24 00:00:17 (12924): Guest Log: -rw-r--r--. 1 atlas atlas       620 Jan 24 08:00 runtime_log
2026-01-24 00:00:17 (12924): Guest Log: -rw-------. 1 atlas atlas   6768640 Jan 24 08:00 result.tar.gz
2026-01-24 00:00:17 (12924): Guest Log: -rw-r--r--. 1 atlas atlas      8730 Jan 24 08:00 runtime_log.err
2026-01-24 00:00:17 (12924): Guest Log: -rw-------. 1 atlas atlas       655 Jan 24 08:00 Ky2LDmUcU38nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmeX2KDmTAfbCo.diag
2026-01-24 00:00:17 (12924): Guest Log: Looking for outputfile HITS.48314293._000076.pool.root.1
2026-01-24 00:00:17 (12924): Guest Log: HITS file was successfully produced
2026-01-24 00:00:17 (12924): Guest Log: -rw-------. 1 atlas atlas 173186687 Jan 24 07:58 /home/atlas/RunAtlas/HITS.48314293._000076.pool.root.1
2026-01-24 00:00:19 (12924): Guest Log: Successfully finished the ATLAS job!
2026-01-24 00:00:19 (12924): Guest Log: Copying the results back to the shared directory!
2026-01-24 00:00:19 (12924): Guest Log:  *** Contents of shared directory: ***
2026-01-24 00:00:19 (12924): Guest Log: total 421676
2026-01-24 00:00:19 (12924): Guest Log: -rwxrwxrwx. 1 root root 251209609 Jan 23 19:48 ATLAS.root_0
2026-01-24 00:00:19 (12924): Guest Log: -rwxrwxrwx. 1 root root 173186687 Jan 24 08:00 HITS.pool.root.1
2026-01-24 00:00:19 (12924): Guest Log: -rwxrwxrwx. 1 root root      8642 Jan 23 19:48 init_data.xml
2026-01-24 00:00:19 (12924): Guest Log: -rwxrwxrwx. 1 root root    597770 Jan 23 18:56 input.tar.gz
2026-01-24 00:00:19 (12924): Guest Log: -rwxrwxrwx. 1 root root   6768640 Jan 24 08:00 result.tar.gz
2026-01-24 00:00:19 (12924): Guest Log: -rwxrwxrwx. 1 root root     15845 Jan 23 18:56 start_atlas.sh
2026-01-24 00:00:19 (12924): Guest Log:  *** Success! Shutting down the machine. ***
2026-01-24 00:00:19 (12924): VM Completion File Detected.
2026-01-24 00:00:19 (12924): Powering off VM.
2026-01-24 00:00:20 (12924): Successfully stopped VM.
2026-01-24 00:00:20 (12924): Deregistering VM. (boinc_f58734ad1a981c0e, slot#5)
2026-01-24 00:00:20 (12924): Removing network bandwidth throttle group from VM.
2026-01-24 00:00:20 (12924): Removing VM from VirtualBox.
2026-01-24 00:00:26 (12924): called boinc_finish(0)

</stderr_txt>
]]>

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