Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
13:29:34 (10364): wrapper (7.7.26015): starting
13:29:34 (10364): wrapper: running run_atlas (--nthreads 8)
[2026-01-23 13:29:34] Arguments: --nthreads 8
[2026-01-23 13:29:34] Threads: 8
[2026-01-23 13:29:34] Checking for CVMFS
[2026-01-23 13:29:34] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-23 13:29:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-23 13:29:34] Running cvmfs_config stat atlas.cern.ch
[2026-01-23 13:29:34] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-23 13:29:34] 2.11.2.0 5808 254253 114084 155445 2 50 17448552 18432001 2749 130560 0 180417706 99.959 12417562 8269 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2026-01-23 13:29:34] CVMFS is ok
[2026-01-23 13:29:34] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-23 13:29:34] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-23 13:29:34] Further information can be found at the LHC@home message board.
[2026-01-23 13:29:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-23 13:29:34] Checking for apptainer binary...
[2026-01-23 13:29:34] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-23 13:29:34] Running /usr/bin/apptainer --version
[2026-01-23 13:29:34] apptainer version 1.3.2-1.el7
[2026-01-23 13:29:34] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-23 13:29:35] c-9-34.aglt2.org
[2026-01-23 13:29:35] apptainer works
[2026-01-23 13:29:35] Set ATHENA_PROC_NUMBER=8
[2026-01-23 13:29:35] Set ATHENA_CORE_NUMBER=8
[2026-01-23 13:29:35] Starting ATLAS job with PandaID=6969844444
[2026-01-23 13:29:35] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-23 14:55:00]  *** The last 200 lines of the pilot log: ***
[2026-01-23 14:55:00]  mtime=0
[2026-01-23 14:55:00]  protocol_id=None
[2026-01-23 14:55:00]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-23 14:55:00]  replicas=None
[2026-01-23 14:55:00]  scope=mc23_13p6TeV
[2026-01-23 14:55:00]  status=None
[2026-01-23 14:55:00]  status_code=0
[2026-01-23 14:55:00]  storage_token=
[2026-01-23 14:55:00]  surl=/tmp/boinchome/slots/3/PanDA_Pilot-6969844444/log.48215263._038186.job.log.tgz.1
[2026-01-23 14:55:00]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c9/3c/log.48215263._038186.job.log.tgz.1
[2026-01-23 14:55:00]  workdir=None
[2026-01-23 14:55:00] ]
[2026-01-23 14:55:00] 2026-01-23 19:54:02,223 | INFO     | transferring file log.48215263._038186.job.log.tgz.1 from /tmp/boinchome/slots/3/PanDA_Pilot-6969844444/log.48215263._038186.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-01-23 14:55:00] 2026-01-23 19:54:02,223 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/3/PanDA_Pilot-6969844444/log.48215263._038186.job.log.tgz.1 /tmp/boinchome/slots/3/log.48215263._038186.job
[2026-01-23 14:55:00] 2026-01-23 19:54:02,238 | INFO     | adding to output.list: log.48215263._038186.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c9/3c/log.48215263._038186.job.log.tg
[2026-01-23 14:55:00] 2026-01-23 19:54:02,238 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-23 14:55:00] 2026-01-23 19:54:02,239 | INFO     | summary of transferred files:
[2026-01-23 14:55:00] 2026-01-23 19:54:02,239 | INFO     |  -- lfn=log.48215263._038186.job.log.tgz.1, status_code=0, status=transferred
[2026-01-23 14:55:00] 2026-01-23 19:54:02,239 | INFO     | stage-out finished correctly
[2026-01-23 14:55:00] 2026-01-23 19:54:02,692 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-23 14:55:00] 2026-01-23 19:54:02,792 | INFO     | monitor loop #369: job 0:6969844444 is in state 'finished'
[2026-01-23 14:55:00] 2026-01-23 19:54:02,803 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-23 14:55:00] 2026-01-23 19:54:04,190 | INFO     | time since job start (5058s) is within the limit (349056.0s)
[2026-01-23 14:55:00] 2026-01-23 19:54:05,317 | INFO     | monitor loop #370: job 0:6969844444 is in state 'finished'
[2026-01-23 14:55:00] 2026-01-23 19:54:05,317 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-23 14:55:00] 2026-01-23 19:54:05,544 | INFO     | job 6969844444 has state=finished
[2026-01-23 14:55:00] 2026-01-23 19:54:05,544 | INFO     | preparing for final server update for job 6969844444 in state='finished'
[2026-01-23 14:55:00] 2026-01-23 19:54:05,545 | INFO     | this job has now completed (state=finished)
[2026-01-23 14:55:00] 2026-01-23 19:54:05,545 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-23 14:55:00] 2026-01-23 19:54:05,545 | INFO     | log transfer has been attempted: DONE
[2026-01-23 14:55:00] 2026-01-23 19:54:05,546 | INFO     | job 6969844444 has finished - writing final server update
[2026-01-23 14:55:00] 2026-01-23 19:54:05,546 | INFO     | total number of processed events: 400 (read)
[2026-01-23 14:55:00] 2026-01-23 19:54:05,547 | INFO     | executing command: lscpu
[2026-01-23 14:55:00] 2026-01-23 19:54:05,583 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-23 14:55:00] 2026-01-23 19:54:06,195 | INFO     | time since job start (5060s) is within the limit (349056.0s)
[2026-01-23 14:55:00] 2026-01-23 19:54:07,820 | INFO     | monitor loop #371: job 0:6969844444 is in state 'finished'
[2026-01-23 14:55:00] 2026-01-23 19:54:07,820 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-23 14:55:00] 2026-01-23 19:54:08,200 | INFO     | time since job start (5062s) is within the limit (349056.0s)
[2026-01-23 14:55:00] 2026-01-23 19:54:08,892 | INFO     | CPU arch script returned: x86-64-v2
[2026-01-23 14:55:00] 2026-01-23 19:54:08,897 | INFO     | found 16 cores (8 cores per socket, 2 sockets) HT, CPU MHz: 2999.9020000000014
[2026-01-23 14:55:00] 2026-01-23 19:54:08,900 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6969844444/memory_monitor_summary.json (trf name=prmon)
[2026-01-23 14:55:00] 2026-01-23 19:54:08,900 | INFO     | extracted standard info from prmon json
[2026-01-23 14:55:00] 2026-01-23 19:54:08,900 | INFO     | extracted standard memory fields from prmon json
[2026-01-23 14:55:00] 2026-01-23 19:54:08,901 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-23 14:55:00] 2026-01-23 19:54:08,901 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-23 14:55:00] 2026-01-23 19:54:08,901 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-23 14:55:00] 2026-01-23 19:54:08,902 | INFO     | fitting pss+swap vs Time
[2026-01-23 14:55:00] 2026-01-23 19:54:08,902 | INFO     | sum of square deviations: 136095575.0
[2026-01-23 14:55:00] 2026-01-23 19:54:08,903 | INFO     | sum of deviations: -10945489494.000002
[2026-01-23 14:55:00] 2026-01-23 19:54:08,903 | INFO     | mean x: 1769195602.5
[2026-01-23 14:55:00] 2026-01-23 19:54:08,903 | INFO     | mean y: 2625771.552631579
[2026-01-23 14:55:00] 2026-01-23 19:54:08,903 | INFO     | intersect: 142290219471.75012
[2026-01-23 14:55:00] 2026-01-23 19:54:08,903 | INFO     | chi2: 0.045999313214625026
[2026-01-23 14:55:00] 2026-01-23 19:54:08,903 | INFO     | current memory leak: -80.43 B/s (using 76 data points, chi2=0.05)
[2026-01-23 14:55:00] 2026-01-23 19:54:08,904 | INFO     | could have reported an average CPU frequency of 2999 MHz (6 samples)
[2026-01-23 14:55:00] 2026-01-23 19:54:08,904 | INFO     | ..............................
[2026-01-23 14:55:00] 2026-01-23 19:54:08,904 | INFO     | . Timing measurements:
[2026-01-23 14:55:00] 2026-01-23 19:54:08,904 | INFO     | . get job = 0 s
[2026-01-23 14:55:00] 2026-01-23 19:54:08,904 | INFO     | . initial setup = 2 s
[2026-01-23 14:55:00] 2026-01-23 19:54:08,904 | INFO     | . payload setup = 4 s
[2026-01-23 14:55:00] 2026-01-23 19:54:08,904 | INFO     | . stage-in = 0 s
[2026-01-23 14:55:00] 2026-01-23 19:54:08,904 | INFO     | . payload execution = 5031 s
[2026-01-23 14:55:00] 2026-01-23 19:54:08,904 | INFO     | . stage-out = 0 s
[2026-01-23 14:55:00] 2026-01-23 19:54:08,905 | INFO     | . log creation = 0 s
[2026-01-23 14:55:00] 2026-01-23 19:54:08,905 | INFO     | ..............................
[2026-01-23 14:55:00] 2026-01-23 19:54:08,969 | INFO     | 
[2026-01-23 14:55:00] 2026-01-23 19:54:08,969 | INFO     | job summary report
[2026-01-23 14:55:00] 2026-01-23 19:54:08,969 | INFO     | --------------------------------------------------
[2026-01-23 14:55:00] 2026-01-23 19:54:08,969 | INFO     | PanDA job id: 6969844444
[2026-01-23 14:55:00] 2026-01-23 19:54:08,969 | INFO     | task id: 48215263
[2026-01-23 14:55:00] 2026-01-23 19:54:08,969 | INFO     | errors: (none)
[2026-01-23 14:55:00] 2026-01-23 19:54:08,969 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-23 14:55:00] 2026-01-23 19:54:08,969 | INFO     | pilot state: finished 
[2026-01-23 14:55:00] 2026-01-23 19:54:08,969 | INFO     | transexitcode: 0
[2026-01-23 14:55:00] 2026-01-23 19:54:08,969 | INFO     | exeerrorcode: 0
[2026-01-23 14:55:00] 2026-01-23 19:54:08,970 | INFO     | exeerrordiag: 
[2026-01-23 14:55:00] 2026-01-23 19:54:08,970 | INFO     | exitcode: 0
[2026-01-23 14:55:00] 2026-01-23 19:54:08,970 | INFO     | exitmsg: OK
[2026-01-23 14:55:00] 2026-01-23 19:54:08,970 | INFO     | cpuconsumptiontime: 37445 s
[2026-01-23 14:55:00] 2026-01-23 19:54:08,970 | INFO     | nevents: 400
[2026-01-23 14:55:00] 2026-01-23 19:54:08,970 | INFO     | neventsw: 0
[2026-01-23 14:55:00] 2026-01-23 19:54:08,970 | INFO     | pid: 21958
[2026-01-23 14:55:00] 2026-01-23 19:54:08,970 | INFO     | pgrp: 21958
[2026-01-23 14:55:00] 2026-01-23 19:54:08,970 | INFO     | corecount: 8
[2026-01-23 14:55:00] 2026-01-23 19:54:08,970 | INFO     | event service: False
[2026-01-23 14:55:00] 2026-01-23 19:54:08,970 | INFO     | sizes: {0: 2283123, 1: 2283979, 4: 2284241, 12: 2284269, 5040: 2310650, 5041: 2319648, 5042: 2319832, 5048: 2320026}
[2026-01-23 14:55:00] 2026-01-23 19:54:08,970 | INFO     | --------------------------------------------------
[2026-01-23 14:55:00] 2026-01-23 19:54:08,971 | INFO     | 
[2026-01-23 14:55:00] 2026-01-23 19:54:08,971 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2026-01-23 14:55:00] 2026-01-23 19:54:08,988 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-23 14:55:00] 2026-01-23 19:54:08,988 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-23 14:55:00] 2026-01-23 19:54:08,988 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-23 14:55:00] 2026-01-23 19:54:08,988 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-23 14:55:00] 2026-01-23 19:54:08,988 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-23 14:55:00] 2026-01-23 19:54:08,988 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-23 14:55:00] 2026-01-23 19:54:08,988 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-23 14:55:00] 2026-01-23 19:54:08,989 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-23 14:55:00] 2026-01-23 19:54:08,989 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-23 14:55:00] 2026-01-23 19:54:08,989 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-23 14:55:00] 2026-01-23 19:54:08,989 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-23 14:55:00] 2026-01-23 19:54:08,989 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-23 14:55:00] 2026-01-23 19:54:08,989 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-23 14:55:00] 2026-01-23 19:54:08,989 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-23 14:55:00] 2026-01-23 19:54:08,989 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-23 14:55:00] 2026-01-23 19:54:08,989 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-23 14:55:00] 2026-01-23 19:54:08,989 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-23 14:55:00] 2026-01-23 19:54:08,989 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-23 14:55:00] 2026-01-23 19:54:08,990 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-23 14:55:00] 2026-01-23 19:54:08,990 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-23 14:55:00] 2026-01-23 19:54:08,990 | INFO     | job 6969844444 has completed (purged errors)
[2026-01-23 14:55:00] 2026-01-23 19:54:08,990 | INFO     | overall cleanup function is called
[2026-01-23 14:55:00] 2026-01-23 19:54:09,996 | INFO     | --- collectZombieJob: --- 10, [21958]
[2026-01-23 14:55:00] 2026-01-23 19:54:09,997 | INFO     | zombie collector waiting for pid 21958
[2026-01-23 14:55:00] 2026-01-23 19:54:09,997 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-23 14:55:00] 2026-01-23 19:54:09,998 | INFO     | collected zombie processes
[2026-01-23 14:55:00] 2026-01-23 19:54:09,998 | INFO     | will attempt to kill all subprocesses of pid=21958
[2026-01-23 14:55:00] 2026-01-23 19:54:10,238 | INFO     | process IDs to be killed: [21958] (in reverse order)
[2026-01-23 14:55:00] 2026-01-23 19:54:10,293 | WARNING  | found no corresponding commands to process id(s)
[2026-01-23 14:55:00] 2026-01-23 19:54:10,293 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-23 14:55:00] 2026-01-23 19:54:10,301 | INFO     | did not find any defunct processes belonging to 21958
[2026-01-23 14:55:00] 2026-01-23 19:54:10,309 | INFO     | did not find any defunct processes belonging to 21958
[2026-01-23 14:55:00] 2026-01-23 19:54:10,309 | INFO     | ready for new job
[2026-01-23 14:55:00] 2026-01-23 19:54:10,309 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-23 14:55:00] 2026-01-23 19:54:10,311 | INFO     | ***************************************
[2026-01-23 14:55:00] 2026-01-23 19:54:10,311 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-23 14:55:00] 2026-01-23 19:54:10,311 | INFO     | ***************************************
[2026-01-23 14:55:00] 2026-01-23 19:54:10,311 | INFO     | 
[2026-01-23 14:55:00] 2026-01-23 19:54:10,313 | INFO     | architecture information:
[2026-01-23 14:55:00] 2026-01-23 19:54:10,313 | INFO     | executing command: cat /etc/os-release
[2026-01-23 14:55:00] 2026-01-23 19:54:10,325 | INFO     | cat /etc/os-release:
[2026-01-23 14:55:00] NAME="CentOS Linux"
[2026-01-23 14:55:00] VERSION="7 (Core)"
[2026-01-23 14:55:00] ID="centos"
[2026-01-23 14:55:00] ID_LIKE="rhel fedora"
[2026-01-23 14:55:00] VERSION_ID="7"
[2026-01-23 14:55:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-23 14:55:00] ANSI_COLOR="0;31"
[2026-01-23 14:55:00] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-23 14:55:00] HOME_URL="https://www.centos.org/"
[2026-01-23 14:55:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-23 14:55:00] 
[2026-01-23 14:55:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-23 14:55:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-23 14:55:00] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-23 14:55:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-23 14:55:00] 
[2026-01-23 14:55:00] 2026-01-23 19:54:10,326 | INFO     | ***************************************
[2026-01-23 14:55:00] 2026-01-23 19:54:10,829 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2026-01-23 14:55:00] 2026-01-23 19:54:10,849 | INFO     | sufficient remaining disk space (104063827968 B)
[2026-01-23 14:55:00] 2026-01-23 19:54:10,849 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-23 14:55:00] 2026-01-23 19:54:10,849 | INFO     | current server update state: UPDATING_FINAL
[2026-01-23 14:55:00] 2026-01-23 19:54:10,849 | INFO     | update_server=False
[2026-01-23 14:55:00] 2026-01-23 19:54:10,850 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-23 14:55:00] 2026-01-23 19:54:10,850 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-23 14:55:00] 2026-01-23 19:54:10,850 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-23 14:55:00] 2026-01-23 19:54:11,101 | INFO     | all payload control threads have been joined
[2026-01-23 14:55:00] 2026-01-23 19:54:11,252 | INFO     | all data control threads have been joined
[2026-01-23 14:55:00] 2026-01-23 19:54:11,329 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-23 14:55:00] 2026-01-23 19:54:11,329 | INFO     | aborting loop
[2026-01-23 14:55:00] 2026-01-23 19:54:11,851 | INFO     | [job] retrieve thread has finished
[2026-01-23 14:55:00] 2026-01-23 19:54:11,851 | INFO     | [job] queue monitor thread has finished
[2026-01-23 14:55:00] 2026-01-23 19:54:12,037 | INFO     | [payload] failed_post thread has finished
[2026-01-23 14:55:00] 2026-01-23 19:54:12,106 | INFO     | [payload] control thread has finished
[2026-01-23 14:55:00] 2026-01-23 19:54:12,111 | INFO     | all job control threads have been joined
[2026-01-23 14:55:00] 2026-01-23 19:54:12,114 | INFO     | [job] create_data_payload thread has finished
[2026-01-23 14:55:00] 2026-01-23 19:54:12,147 | INFO     | [payload] validate_pre thread has finished
[2026-01-23 14:55:00] 2026-01-23 19:54:12,148 | INFO     | [job] validate thread has finished
[2026-01-23 14:55:00] 2026-01-23 19:54:12,210 | INFO     | [payload] execute_payloads thread has finished
[2026-01-23 14:55:00] 2026-01-23 19:54:12,259 | INFO     | [data] control thread has finished
[2026-01-23 14:55:00] 2026-01-23 19:54:12,335 | INFO     | [job] job monitor thread has finished
[2026-01-23 14:55:00] 2026-01-23 19:54:12,455 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-23 14:55:00] 2026-01-23 19:54:12,857 | INFO     | [data] copytool_out thread has finished
[2026-01-23 14:55:00] 2026-01-23 19:54:12,906 | INFO     | [data] copytool_in thread has finished
[2026-01-23 14:55:00] 2026-01-23 19:54:13,014 | INFO     | [payload] validate_post thread has finished
[2026-01-23 14:55:00] 2026-01-23 19:54:13,117 | INFO     | [job] control thread has finished
[2026-01-23 14:55:00] 2026-01-23 19:54:13,328 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-23 14:55:00] 2026-01-23 19:54:17,335 | INFO     | [data] queue_monitor thread has finished
[2026-01-23 14:55:00] 2026-01-23 19:54:41,568 | INFO     | PID=14373 has CPU usage=4.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-23 14:55:00] 2026-01-23 19:54:41,568 | INFO     | .. there are 4 such processes running
[2026-01-23 14:55:00] 2026-01-23 19:54:41,569 | INFO     | found 0 job(s) in 20 queues
[2026-01-23 14:55:00] 2026-01-23 19:54:41,569 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-23 14:55:00] 2026-01-23 19:54:41,569 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-23 14:55:00] 2026-01-23 19:54:53,957 | INFO     | [monitor] cgroup control has ended
[2026-01-23 14:55:00] 2026-01-23 19:54:55,385 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140420854736704)>', '<ExcThread(monitor, started 140419971139328)>']
[2026-01-23 14:55:00] 2026-01-23 19:54:55,641 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-23 14:55:00] 2026-01-23 19:54:55,641 | INFO     | [monitor] control thread has ended
[2026-01-23 14:55:00] 2026-01-23 19:55:00,410 | INFO     | all workflow threads have been joined
[2026-01-23 14:55:00] 2026-01-23 19:55:00,411 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-23 14:55:00] 2026-01-23 19:55:00,411 | INFO     | traces error code: 0
[2026-01-23 14:55:00] 2026-01-23 19:55:00,411 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-23 14:55:00] 2026-01-23 19:55:00,516 [wrapper] ==== pilot stdout END ====
[2026-01-23 14:55:00] 2026-01-23 19:55:00,519 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-23 14:55:00] 2026-01-23 19:55:00,521 [wrapper] pilotpid: 14373
[2026-01-23 14:55:00] 2026-01-23 19:55:00,524 [wrapper] Pilot exit status: 0
[2026-01-23 14:55:00] 2026-01-23 19:55:00,538 [wrapper] pandaids: 6969844444
[2026-01-23 14:55:00] 2026-01-23 19:55:00,584 [wrapper] cleanup supervisor_pilot 48231 14374
[2026-01-23 14:55:00] 2026-01-23 19:55:00,587 [wrapper] Test setup, not cleaning
[2026-01-23 14:55:00] 2026-01-23 19:55:00,589 [wrapper] apfmon messages muted
[2026-01-23 14:55:00] 2026-01-23 19:55:00,591 [wrapper] ==== wrapper stdout END ====
[2026-01-23 14:55:00] 2026-01-23 19:55:00,593 [wrapper] ==== wrapper stderr END ====
[2026-01-23 14:55:00]  *** Error codes and diagnostics ***
[2026-01-23 14:55:00]     "exeErrorCode": 0,
[2026-01-23 14:55:00]     "exeErrorDiag": "",
[2026-01-23 14:55:00]     "pilotErrorCode": 0,
[2026-01-23 14:55:00]     "pilotErrorDiag": "",
[2026-01-23 14:55:00]  *** Listing of results directory ***
[2026-01-23 14:55:00] total 734588
[2026-01-23 14:55:00] -rw-r--r-- 1 boincer umatlas    579449 Jan 14 18:30 pilot3.tar.gz
[2026-01-23 14:55:00] -rwx------ 1 boincer umatlas     36322 Jan 14 18:31 runpilot2-wrapper.sh
[2026-01-23 14:55:00] -rw-r--r-- 1 boincer umatlas      5112 Jan 14 18:35 queuedata.json
[2026-01-23 14:55:00] -rw-r--r-- 1 boincer umatlas       100 Jan 23 13:29 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-23 14:55:00] -rwxr-xr-x 1 boincer umatlas      7986 Jan 23 13:29 run_atlas
[2026-01-23 14:55:00] -rw-r--r-- 1 boincer umatlas       105 Jan 23 13:29 job.xml
[2026-01-23 14:55:00] -rw-r--r-- 2 boincer umatlas 593574316 Jan 23 13:29 EVNT.32794306._001524.pool.root.1
[2026-01-23 14:55:00] -rw-r--r-- 2 boincer umatlas     15847 Jan 23 13:29 start_atlas.sh
[2026-01-23 14:55:00] drwxrwx--x 2 boincer umatlas      4096 Jan 23 13:29 shared
[2026-01-23 14:55:00] -rw-r--r-- 2 boincer umatlas    592399 Jan 23 13:29 input.tar.gz
[2026-01-23 14:55:00] -rw-r--r-- 1 boincer umatlas         0 Jan 23 13:29 boinc_lockfile
[2026-01-23 14:55:00] -rw-r--r-- 1 boincer umatlas      2508 Jan 23 13:29 pandaJob.out
[2026-01-23 14:55:00] -rw------- 1 boincer umatlas        57 Jan 23 13:29 setup.sh.local
[2026-01-23 14:55:00] -rw------- 1 boincer umatlas   1004222 Jan 23 13:29 agis_schedconf.cvmfs.json
[2026-01-23 14:55:00] -rw------- 1 boincer umatlas   1516246 Jan 23 13:29 agis_ddmendpoints.agis.ALL.json
[2026-01-23 14:55:00] drwx------ 5 boincer umatlas      4096 Jan 23 13:29 pilot3
[2026-01-23 14:55:00] -rw-r--r-- 1 boincer umatlas      6035 Jan 23 14:45 init_data.xml
[2026-01-23 14:55:00] -rw------- 1 boincer umatlas 152576571 Jan 23 14:53 HITS.48215263._038186.pool.root.1
[2026-01-23 14:55:00] -rw-r--r-- 1 boincer umatlas       530 Jan 23 14:53 boinc_task_state.xml
[2026-01-23 14:55:00] -rw------- 1 boincer umatlas      1046 Jan 23 14:53 memory_monitor_summary.json
[2026-01-23 14:55:00] -rw------- 1 boincer umatlas    330564 Jan 23 14:54 log.48215263._038186.job.log.tgz.1
[2026-01-23 14:55:00] -rw------- 1 boincer umatlas        95 Jan 23 14:54 pilot_heartbeat.json
[2026-01-23 14:55:00] -rw------- 1 boincer umatlas      7832 Jan 23 14:54 heartbeat.json
[2026-01-23 14:55:00] -rw-r--r-- 1 boincer umatlas      8192 Jan 23 14:54 boinc_mmap_file
[2026-01-23 14:55:00] -rw-r--r-- 1 boincer umatlas        27 Jan 23 14:54 wrapper_checkpoint.txt
[2026-01-23 14:55:00] -rw------- 1 boincer umatlas      4822 Jan 23 14:55 pilotlog.txt
[2026-01-23 14:55:00] -rw------- 1 boincer umatlas    733790 Jan 23 14:55 log.48215263._038186.job.log.1
[2026-01-23 14:55:00] -rw------- 1 boincer umatlas       357 Jan 23 14:55 output.list
[2026-01-23 14:55:00] -rw-r--r-- 1 boincer umatlas       620 Jan 23 14:55 runtime_log
[2026-01-23 14:55:00] -rw------- 1 boincer umatlas   1085440 Jan 23 14:55 result.tar.gz
[2026-01-23 14:55:00] -rw-r--r-- 1 boincer umatlas      9332 Jan 23 14:55 runtime_log.err
[2026-01-23 14:55:00] -rw------- 1 boincer umatlas       655 Jan 23 14:55 j1EMDm9VP08nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmMCtKDmG1kpCn.diag
[2026-01-23 14:55:00] -rw-r--r-- 1 boincer umatlas     21755 Jan 23 14:55 stderr.txt
[2026-01-23 14:55:00] HITS file was successfully produced:
[2026-01-23 14:55:00] -rw------- 1 boincer umatlas 152576571 Jan 23 14:53 shared/HITS.pool.root.1
[2026-01-23 14:55:00]  *** Contents of shared directory: ***
[2026-01-23 14:55:00] total 730332
[2026-01-23 14:55:00] -rw-r--r-- 2 boincer umatlas 593574316 Jan 23 13:29 ATLAS.root_0
[2026-01-23 14:55:00] -rw-r--r-- 2 boincer umatlas     15847 Jan 23 13:29 start_atlas.sh
[2026-01-23 14:55:00] -rw-r--r-- 2 boincer umatlas    592399 Jan 23 13:29 input.tar.gz
[2026-01-23 14:55:00] -rw------- 1 boincer umatlas 152576571 Jan 23 14:53 HITS.pool.root.1
[2026-01-23 14:55:00] -rw------- 1 boincer umatlas   1085440 Jan 23 14:55 result.tar.gz
14:55:01 (10364): run_atlas exited; CPU time 37547.564154
14:55:01 (10364): called boinc_finish(0)

</stderr_txt>
]]>

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