Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
05:38:40 (780326): wrapper (7.7.26015): starting
05:38:40 (780326): wrapper: running run_atlas (--nthreads 4)
[2026-01-24 05:38:40] Arguments: --nthreads 4
[2026-01-24 05:38:40] Threads: 4
[2026-01-24 05:38:40] Checking for CVMFS
[2026-01-24 05:38:40] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-24 05:38:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-24 05:38:40] Running cvmfs_config stat atlas.cern.ch
[2026-01-24 05:38:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-24 05:38:40] 2.9.2.0 3061 4185 98524 155460 1 50 22727279 36864000 0 130560 0 2177751 99.991 104347 8877 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-01-24 05:38:40] CVMFS is ok
[2026-01-24 05:38:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-24 05:38:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-24 05:38:40] Further information can be found at the LHC@home message board.
[2026-01-24 05:38:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-24 05:38:40] Checking for apptainer binary...
[2026-01-24 05:38:40] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-24 05:38:40] Running /usr/bin/apptainer --version
[2026-01-24 05:38:40] apptainer version 1.4.1-1.1
[2026-01-24 05:38:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-24 05:38:40] thA325
[2026-01-24 05:38:40] apptainer works
[2026-01-24 05:38:40] Set ATHENA_PROC_NUMBER=4
[2026-01-24 05:38:40] Set ATHENA_CORE_NUMBER=4
[2026-01-24 05:38:40] Starting ATLAS job with PandaID=6978386567
[2026-01-24 05:38:40] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-24 06:45:01]  *** The last 200 lines of the pilot log: ***
[2026-01-24 06:45:01] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-24 06:45:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-24 06:45:01] 
[2026-01-24 06:45:01] 2026-01-24 05:44:05,425 | INFO     | **************************************
[2026-01-24 06:45:01] 2026-01-24 05:44:05,928 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-01-24 06:45:01] 2026-01-24 05:44:05,946 | INFO     | sufficient remaining disk space (234357784576 B)
[2026-01-24 06:45:01] 2026-01-24 05:44:05,946 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-24 06:45:01] 2026-01-24 05:44:05,946 | INFO     | current server update state: UPDATING_FINAL
[2026-01-24 06:45:01] 2026-01-24 05:44:05,946 | INFO     | update_server=False
[2026-01-24 06:45:01] 2026-01-24 05:44:05,946 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-24 06:45:01] 2026-01-24 05:44:05,946 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-24 06:45:01] 2026-01-24 05:44:05,946 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-24 06:45:01] 2026-01-24 05:44:06,001 | WARNING  | process 788955 can no longer be monitored (due to stat problems) - aborting
[2026-01-24 06:45:01] 2026-01-24 05:44:06,031 | INFO     | using path: /local/data/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-01-24 06:45:01] 2026-01-24 05:44:06,069 | INFO     | number of running child processes to parent process 788955: 1
[2026-01-24 06:45:01] 2026-01-24 05:44:06,069 | INFO     | maximum number of monitored processes: 6
[2026-01-24 06:45:01] 2026-01-24 05:44:06,069 | INFO     | aborting job monitoring since job object (job id=6978386567) has expired
[2026-01-24 06:45:01] 2026-01-24 05:44:06,069 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-24 06:45:01] 2026-01-24 05:44:06,069 | INFO     | will abort loop
[2026-01-24 06:45:01] 2026-01-24 05:44:06,143 | INFO     | all data control threads have been joined
[2026-01-24 06:45:01] 2026-01-24 05:44:06,497 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-24 06:45:01] 2026-01-24 05:44:06,744 | INFO     | all payload control threads have been joined
[2026-01-24 06:45:01] 2026-01-24 05:44:06,952 | INFO     | [job] retrieve thread has finished
[2026-01-24 06:45:01] 2026-01-24 05:44:06,952 | INFO     | [job] queue monitor thread has finished
[2026-01-24 06:45:01] 2026-01-24 05:44:07,051 | INFO     | [payload] validate_pre thread has finished
[2026-01-24 06:45:01] 2026-01-24 05:44:07,075 | INFO     | [job] job monitor thread has finished
[2026-01-24 06:45:01] 2026-01-24 05:44:07,149 | INFO     | [data] control thread has finished
[2026-01-24 06:45:01] 2026-01-24 05:44:07,188 | INFO     | [payload] execute_payloads thread has finished
[2026-01-24 06:45:01] 2026-01-24 05:44:07,200 | INFO     | [data] copytool_in thread has finished
[2026-01-24 06:45:01] 2026-01-24 05:44:07,212 | INFO     | all job control threads have been joined
[2026-01-24 06:45:01] 2026-01-24 05:44:07,527 | INFO     | [payload] validate_post thread has finished
[2026-01-24 06:45:01] 2026-01-24 05:44:07,750 | INFO     | [payload] control thread has finished
[2026-01-24 06:45:01] 2026-01-24 05:44:08,218 | INFO     | [job] control thread has finished
[2026-01-24 06:45:01] 2026-01-24 05:44:08,348 | INFO     | [payload] failed_post thread has finished
[2026-01-24 06:45:01] 2026-01-24 05:44:08,368 | INFO     | [job] validate thread has finished
[2026-01-24 06:45:01] 2026-01-24 05:44:08,442 | INFO     | [job] create_data_payload thread has finished
[2026-01-24 06:45:01] 2026-01-24 05:44:08,504 | INFO     | [data] copytool_out thread has finished
[2026-01-24 06:45:01] 2026-01-24 05:44:09,953 | INFO     | [data] queue_monitor thread has finished
[2026-01-24 06:45:01] 2026-01-24 05:44:16,195 | INFO     | job.realtimelogging is not enabled
[2026-01-24 06:45:01] 2026-01-24 05:44:17,201 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-24 06:45:01] 2026-01-24 05:44:36,821 | INFO     | PID=784434 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-24 06:45:01] 2026-01-24 05:44:36,821 | INFO     | found 0 job(s) in 20 queues
[2026-01-24 06:45:01] 2026-01-24 05:44:36,821 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-24 06:45:01] 2026-01-24 05:44:36,821 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-24 06:45:01] 2026-01-24 05:44:56,684 | INFO     | [monitor] cgroup control has ended
[2026-01-24 06:45:01] 2026-01-24 05:44:56,807 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140380329776960)>', '<ExcThread(monitor, started 140379219273472)>']
[2026-01-24 06:45:01] 2026-01-24 05:44:56,929 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-24 06:45:01] 2026-01-24 05:44:56,929 | INFO     | [monitor] control thread has ended
[2026-01-24 06:45:01] 2026-01-24 05:45:01,820 | INFO     | all workflow threads have been joined
[2026-01-24 06:45:01] 2026-01-24 05:45:01,820 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-24 06:45:01] 2026-01-24 05:45:01,820 | INFO     | traces error code: 0
[2026-01-24 06:45:01] 2026-01-24 05:45:01,821 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-24 06:45:01] 2026-01-24 05:45:01,887 [wrapper] ==== pilot stdout END ====
[2026-01-24 06:45:01] 2026-01-24 05:45:01,891 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-24 06:45:01] 2026-01-24 05:45:01,895 [wrapper] pilotpid: 784434
[2026-01-24 06:45:01] 2026-01-24 05:45:01,899 [wrapper] Pilot exit status: 0
[2026-01-24 06:45:01] 2026-01-24 05:45:01,910 [wrapper] pandaids: 6978386567
[2026-01-24 06:45:01] 2026-01-24 05:45:01,932 [wrapper] cleanup supervisor_pilot  793976 784435
[2026-01-24 06:45:01] 2026-01-24 05:45:01,935 [wrapper] Test setup, not cleaning
[2026-01-24 06:45:01] 2026-01-24 05:45:01,939 [wrapper] apfmon messages muted
[2026-01-24 06:45:01] 2026-01-24 05:45:01,942 [wrapper] ==== wrapper stdout END ====
[2026-01-24 06:45:01] 2026-01-24 05:45:01,946 [wrapper] ==== wrapper stderr END ====
[2026-01-24 06:45:01]  *** Error codes and diagnostics ***
[2026-01-24 06:45:01]     "exeErrorCode": 0,
[2026-01-24 06:45:01]     "exeErrorDiag": "",
[2026-01-24 06:45:01]     "pilotErrorCode": 0,
[2026-01-24 06:45:01]     "pilotErrorDiag": "",
[2026-01-24 06:45:01]  *** Listing of results directory ***
[2026-01-24 06:45:02] total 670384
[2026-01-24 06:45:02] -rw-r--r-- 1 boinc boinc    584422 Jan 23 10:46 pilot3.tar.gz
[2026-01-24 06:45:02] -rwx------ 1 boinc boinc     36322 Jan 23 10:46 runpilot2-wrapper.sh
[2026-01-24 06:45:02] -rw-r--r-- 1 boinc boinc      5111 Jan 23 10:48 queuedata.json
[2026-01-24 06:45:02] -rw-r--r-- 1 boinc boinc       100 Jan 24 05:38 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-24 06:45:02] -rwxr-xr-x 1 boinc boinc      7986 Jan 24 05:38 run_atlas
[2026-01-24 06:45:02] -rw-r--r-- 1 boinc boinc       105 Jan 24 05:38 job.xml
[2026-01-24 06:45:02] -rw-r--r-- 2 boinc boinc 502496477 Jan 24 05:38 EVNT.48310824._000026.pool.root.1
[2026-01-24 06:45:02] -rw-r--r-- 2 boinc boinc    597750 Jan 24 05:38 input.tar.gz
[2026-01-24 06:45:02] -rw-r--r-- 2 boinc boinc     15845 Jan 24 05:38 start_atlas.sh
[2026-01-24 06:45:02] drwxrwx--x 2 boinc boinc      4096 Jan 24 05:38 shared
[2026-01-24 06:45:02] -rw-r--r-- 1 boinc boinc         0 Jan 24 05:38 boinc_setup_complete
[2026-01-24 06:45:02] -rw-r--r-- 1 boinc boinc      6369 Jan 24 05:38 init_data.xml
[2026-01-24 06:45:02] -rw-r--r-- 1 boinc boinc         0 Jan 24 05:38 boinc_lockfile
[2026-01-24 06:45:02] -rw-r--r-- 1 boinc boinc      2525 Jan 24 05:38 pandaJob.out
[2026-01-24 06:45:02] -rw------- 1 boinc boinc   1004238 Jan 24 05:38 agis_schedconf.cvmfs.json
[2026-01-24 06:45:02] -rw------- 1 boinc boinc   1516246 Jan 24 05:38 agis_ddmendpoints.agis.ALL.json
[2026-01-24 06:45:02] -rw------- 1 boinc boinc       420 Jan 24 05:38 workernode_map.json
[2026-01-24 06:45:02] drwx------ 5 boinc boinc      4096 Jan 24 05:38 pilot3
[2026-01-24 06:45:02] -rw------- 1 boinc boinc 178324248 Jan 24 06:43 HITS.48310826._001133.pool.root.1
[2026-01-24 06:45:02] -rw-r--r-- 1 boinc boinc       530 Jan 24 06:43 boinc_task_state.xml
[2026-01-24 06:45:02] -rw------- 1 boinc boinc      1017 Jan 24 06:43 memory_monitor_summary.json
[2026-01-24 06:45:02] -rw------- 1 boinc boinc    277901 Jan 24 06:44 log.48310826._001133.job.log.tgz.1
[2026-01-24 06:45:02] -rw------- 1 boinc boinc      6306 Jan 24 06:44 heartbeat.json
[2026-01-24 06:45:02] -rw-r--r-- 1 boinc boinc      8192 Jan 24 06:44 boinc_mmap_file
[2026-01-24 06:45:02] -rw-r--r-- 1 boinc boinc        27 Jan 24 06:44 wrapper_checkpoint.txt
[2026-01-24 06:45:02] -rw------- 1 boinc boinc        95 Jan 24 06:44 pilot_heartbeat.json
[2026-01-24 06:45:02] -rw------- 1 boinc boinc      5341 Jan 24 06:45 pilotlog.txt
[2026-01-24 06:45:02] -rw------- 1 boinc boinc    584003 Jan 24 06:45 log.48310826._001133.job.log.1
[2026-01-24 06:45:02] -rw------- 1 boinc boinc       357 Jan 24 06:45 output.list
[2026-01-24 06:45:02] -rw-r--r-- 1 boinc boinc       620 Jan 24 06:45 runtime_log
[2026-01-24 06:45:02] -rw------- 1 boinc boinc    880640 Jan 24 06:45 result.tar.gz
[2026-01-24 06:45:02] -rw-r--r-- 1 boinc boinc      8896 Jan 24 06:45 runtime_log.err
[2026-01-24 06:45:02] -rw------- 1 boinc boinc       657 Jan 24 06:45 9MlKDmqvS38nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmXQ2KDmJB3A1m.diag
[2026-01-24 06:45:02] -rw-r--r-- 1 boinc boinc      8814 Jan 24 06:45 stderr.txt
[2026-01-24 06:45:02] HITS file was successfully produced:
[2026-01-24 06:45:02] -rw------- 1 boinc boinc 178324248 Jan 24 06:43 shared/HITS.pool.root.1
[2026-01-24 06:45:02]  *** Contents of shared directory: ***
[2026-01-24 06:45:02] total 666336
[2026-01-24 06:45:02] -rw-r--r-- 2 boinc boinc 502496477 Jan 24 05:38 ATLAS.root_0
[2026-01-24 06:45:02] -rw-r--r-- 2 boinc boinc    597750 Jan 24 05:38 input.tar.gz
[2026-01-24 06:45:02] -rw-r--r-- 2 boinc boinc     15845 Jan 24 05:38 start_atlas.sh
[2026-01-24 06:45:02] -rw------- 1 boinc boinc 178324248 Jan 24 06:43 HITS.pool.root.1
[2026-01-24 06:45:02] -rw------- 1 boinc boinc    880640 Jan 24 06:45 result.tar.gz
06:45:23 (780326): run_atlas exited; CPU time 14688.090056
06:45:23 (780326): called boinc_finish(0)

</stderr_txt>
]]>

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