Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
04:11:09 (1804078): wrapper (7.7.26015): starting
04:11:09 (1804078): wrapper: running run_atlas (--nthreads 6)
[2026-01-24 04:11:09] Arguments: --nthreads 6
[2026-01-24 04:11:09] Threads: 6
[2026-01-24 04:11:09] Checking for CVMFS
[2026-01-24 04:11:09] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-24 04:11:27] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-24 04:11:27] Running cvmfs_config stat atlas.cern.ch
[2026-01-24 04:11:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-24 04:11:27] 2.13.3.0 1625780 735 61420 155446 2 50 13398804 20971520 929 130560 0 588207 99.994 23439 13 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2026-01-24 04:11:27] CVMFS is ok
[2026-01-24 04:11:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-24 04:11:27] Checking for apptainer binary...
[2026-01-24 04:11:27] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-24 04:11:27] Running /usr/bin/apptainer --version
[2026-01-24 04:11:27] apptainer version 1.4.5-2.el9
[2026-01-24 04:11:27] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-24 04:11:27] testio005
[2026-01-24 04:11:27] apptainer works
[2026-01-24 04:11:28] Set ATHENA_PROC_NUMBER=6
[2026-01-24 04:11:28] Set ATHENA_CORE_NUMBER=6
[2026-01-24 04:11:28] Starting ATLAS job with PandaID=6978384964
[2026-01-24 04:11:28] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-24 05:52:21]  *** The last 200 lines of the pilot log: ***
[2026-01-24 05:52:21]  lfn=log.48310826._000950.job.log.tgz.1
[2026-01-24 05:52:21]  mtime=0
[2026-01-24 05:52:21]  protocol_id=None
[2026-01-24 05:52:21]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-24 05:52:21]  replicas=None
[2026-01-24 05:52:21]  scope=mc23_13p6TeV
[2026-01-24 05:52:21]  status=None
[2026-01-24 05:52:21]  status_code=0
[2026-01-24 05:52:21]  storage_token=
[2026-01-24 05:52:21]  surl=/var/lib/boinc/slots/1/PanDA_Pilot-6978384964/log.48310826._000950.job.log.tgz.1
[2026-01-24 05:52:21]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b7/91/log.48310826._000950.job.log.tgz.1
[2026-01-24 05:52:21]  workdir=None
[2026-01-24 05:52:21] ]
[2026-01-24 05:52:21] 2026-01-23 20:51:45,165 | INFO     | transferring file log.48310826._000950.job.log.tgz.1 from /var/lib/boinc/slots/1/PanDA_Pilot-6978384964/log.48310826._000950.job.log.tgz.1 to /var/lib/boinc/slots/
[2026-01-24 05:52:21] 2026-01-23 20:51:45,165 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/1/PanDA_Pilot-6978384964/log.48310826._000950.job.log.tgz.1 /var/lib/boinc/slots/1/log.48310826._000950.job
[2026-01-24 05:52:21] 2026-01-23 20:51:45,178 | INFO     | adding to output.list: log.48310826._000950.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b7/91/log.48310826._000950.job.log.tg
[2026-01-24 05:52:21] 2026-01-23 20:51:45,179 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-24 05:52:21] 2026-01-23 20:51:45,179 | INFO     | summary of transferred files:
[2026-01-24 05:52:21] 2026-01-23 20:51:45,179 | INFO     |  -- lfn=log.48310826._000950.job.log.tgz.1, status_code=0, status=transferred
[2026-01-24 05:52:21] 2026-01-23 20:51:45,179 | INFO     | stage-out finished correctly
[2026-01-24 05:52:21] 2026-01-23 20:51:46,357 | INFO     | time since job start (5935s) is within the limit (349056.0s)
[2026-01-24 05:52:21] 2026-01-23 20:51:47,422 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-24 05:52:21] 2026-01-23 20:51:48,363 | INFO     | time since job start (5937s) is within the limit (349056.0s)
[2026-01-24 05:52:21] 2026-01-23 20:51:49,014 | WARNING  | process 1812821 can no longer be monitored (due to stat problems) - aborting
[2026-01-24 05:52:21] 2026-01-23 20:51:49,014 | INFO     | using path: /var/lib/boinc/slots/1/PanDA_Pilot-6978384964/memory_monitor_summary.json (trf name=prmon)
[2026-01-24 05:52:21] 2026-01-23 20:51:49,087 | INFO     | number of running child processes to parent process 1812821: 1
[2026-01-24 05:52:21] 2026-01-23 20:51:49,087 | INFO     | maximum number of monitored processes: 6
[2026-01-24 05:52:21] 2026-01-23 20:51:49,593 | INFO     | job 6978384964 has state=finished
[2026-01-24 05:52:21] 2026-01-23 20:51:49,593 | INFO     | preparing for final server update for job 6978384964 in state='finished'
[2026-01-24 05:52:21] 2026-01-23 20:51:49,594 | INFO     | reading metadata from: /var/lib/boinc/slots/1/PanDA_Pilot-6978384964/jobReport.json
[2026-01-24 05:52:21] 2026-01-23 20:51:49,595 | INFO     | added worker_node to metadata from /var/lib/boinc/slots/1/workernode_map.json
[2026-01-24 05:52:21] 2026-01-23 20:51:49,595 | INFO     | this job has now completed (state=finished)
[2026-01-24 05:52:21] 2026-01-23 20:51:49,595 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-24 05:52:21] 2026-01-23 20:51:49,595 | INFO     | log transfer has been attempted: DONE
[2026-01-24 05:52:21] 2026-01-23 20:51:49,595 | INFO     | job 6978384964 has finished - writing final server update
[2026-01-24 05:52:21] 2026-01-23 20:51:49,596 | INFO     | total number of processed events: 400 (read)
[2026-01-24 05:52:21] 2026-01-23 20:51:49,599 | INFO     | using path: /var/lib/boinc/slots/1/PanDA_Pilot-6978384964/memory_monitor_summary.json (trf name=prmon)
[2026-01-24 05:52:21] 2026-01-23 20:51:49,599 | INFO     | extracted standard info from prmon json
[2026-01-24 05:52:21] 2026-01-23 20:51:49,599 | INFO     | extracted standard memory fields from prmon json
[2026-01-24 05:52:21] 2026-01-23 20:51:49,599 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-24 05:52:21] 2026-01-23 20:51:49,599 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-24 05:52:21] 2026-01-23 20:51:49,599 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-24 05:52:21] 2026-01-23 20:51:49,601 | INFO     | fitting pss+swap vs Time
[2026-01-24 05:52:21] 2026-01-23 20:51:49,601 | INFO     | sum of square deviations: 226024368.4888887
[2026-01-24 05:52:21] 2026-01-23 20:51:49,602 | INFO     | sum of deviations: -13587179988.333334
[2026-01-24 05:52:21] 2026-01-23 20:51:49,602 | INFO     | mean x: 1769198613.511111
[2026-01-24 05:52:21] 2026-01-23 20:51:49,602 | INFO     | mean y: 2623290.8333333335
[2026-01-24 05:52:21] 2026-01-23 20:51:49,602 | INFO     | intersect: 106355845988.00002
[2026-01-24 05:52:21] 2026-01-23 20:51:49,602 | INFO     | chi2: 0.10473977607351462
[2026-01-24 05:52:21] 2026-01-23 20:51:49,602 | INFO     | current memory leak: -60.11 B/s (using 90 data points, chi2=0.10)
[2026-01-24 05:52:21] 2026-01-23 20:51:49,602 | INFO     | could have reported an average CPU frequency of 3290 MHz (7 samples)
[2026-01-24 05:52:21] 2026-01-23 20:51:49,603 | INFO     | ..............................
[2026-01-24 05:52:21] 2026-01-23 20:51:49,603 | INFO     | . Timing measurements:
[2026-01-24 05:52:21] 2026-01-23 20:51:49,603 | INFO     | . get job = 0 s
[2026-01-24 05:52:21] 2026-01-23 20:51:49,603 | INFO     | . initial setup = 9 s
[2026-01-24 05:52:21] 2026-01-23 20:51:49,603 | INFO     | . payload setup = 6 s
[2026-01-24 05:52:21] 2026-01-23 20:51:49,603 | INFO     | . stage-in = 0 s
[2026-01-24 05:52:21] 2026-01-23 20:51:49,603 | INFO     | . payload execution = 5911 s
[2026-01-24 05:52:21] 2026-01-23 20:51:49,603 | INFO     | . stage-out = 0 s
[2026-01-24 05:52:21] 2026-01-23 20:51:49,603 | INFO     | . log creation = 0 s
[2026-01-24 05:52:21] 2026-01-23 20:51:49,603 | INFO     | ..............................
[2026-01-24 05:52:21] 2026-01-23 20:51:49,903 | INFO     | 
[2026-01-24 05:52:21] 2026-01-23 20:51:49,903 | INFO     | job summary report
[2026-01-24 05:52:21] 2026-01-23 20:51:49,903 | INFO     | --------------------------------------------------
[2026-01-24 05:52:21] 2026-01-23 20:51:49,903 | INFO     | PanDA job id: 6978384964
[2026-01-24 05:52:21] 2026-01-23 20:51:49,903 | INFO     | task id: 48310826
[2026-01-24 05:52:21] 2026-01-23 20:51:49,903 | INFO     | errors: (none)
[2026-01-24 05:52:21] 2026-01-23 20:51:49,903 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-24 05:52:21] 2026-01-23 20:51:49,903 | INFO     | pilot state: finished 
[2026-01-24 05:52:21] 2026-01-23 20:51:49,903 | INFO     | transexitcode: 0
[2026-01-24 05:52:21] 2026-01-23 20:51:49,904 | INFO     | exeerrorcode: 0
[2026-01-24 05:52:21] 2026-01-23 20:51:49,904 | INFO     | exeerrordiag: 
[2026-01-24 05:52:21] 2026-01-23 20:51:49,904 | INFO     | exitcode: 0
[2026-01-24 05:52:21] 2026-01-23 20:51:49,904 | INFO     | exitmsg: OK
[2026-01-24 05:52:21] 2026-01-23 20:51:49,904 | INFO     | cpuconsumptiontime: 32914 s
[2026-01-24 05:52:21] 2026-01-23 20:51:49,904 | INFO     | nevents: 400
[2026-01-24 05:52:21] 2026-01-23 20:51:49,904 | INFO     | neventsw: 0
[2026-01-24 05:52:21] 2026-01-23 20:51:49,904 | INFO     | pid: 1812821
[2026-01-24 05:52:21] 2026-01-23 20:51:49,904 | INFO     | pgrp: 1812821
[2026-01-24 05:52:21] 2026-01-23 20:51:49,904 | INFO     | corecount: 6
[2026-01-24 05:52:21] 2026-01-23 20:51:49,904 | INFO     | event service: False
[2026-01-24 05:52:21] 2026-01-23 20:51:49,904 | INFO     | sizes: {0: 2283750, 1: 2284267, 12: 2284267, 5921: 2311080, 5922: 2320078, 5924: 2320134, 5926: 2320456}
[2026-01-24 05:52:21] 2026-01-23 20:51:49,904 | INFO     | --------------------------------------------------
[2026-01-24 05:52:21] 2026-01-23 20:51:49,904 | INFO     | 
[2026-01-24 05:52:21] 2026-01-23 20:51:49,904 | INFO     | executing command: ls -lF /var/lib/boinc/slots/1
[2026-01-24 05:52:21] 2026-01-23 20:51:49,918 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-24 05:52:21] 2026-01-23 20:51:49,918 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-24 05:52:21] 2026-01-23 20:51:49,918 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-24 05:52:21] 2026-01-23 20:51:49,918 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-24 05:52:21] 2026-01-23 20:51:49,918 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-24 05:52:21] 2026-01-23 20:51:49,918 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-24 05:52:21] 2026-01-23 20:51:49,918 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-24 05:52:21] 2026-01-23 20:51:49,918 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-24 05:52:21] 2026-01-23 20:51:49,919 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-24 05:52:21] 2026-01-23 20:51:49,919 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-24 05:52:21] 2026-01-23 20:51:49,919 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-24 05:52:21] 2026-01-23 20:51:49,919 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-24 05:52:21] 2026-01-23 20:51:49,919 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-24 05:52:21] 2026-01-23 20:51:49,919 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-24 05:52:21] 2026-01-23 20:51:49,919 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-24 05:52:21] 2026-01-23 20:51:49,919 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-24 05:52:21] 2026-01-23 20:51:49,919 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-24 05:52:21] 2026-01-23 20:51:49,919 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-24 05:52:21] 2026-01-23 20:51:49,919 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-24 05:52:21] 2026-01-23 20:51:49,919 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-24 05:52:21] 2026-01-23 20:51:49,919 | INFO     | job 6978384964 has completed (purged errors)
[2026-01-24 05:52:21] 2026-01-23 20:51:49,919 | INFO     | overall cleanup function is called
[2026-01-24 05:52:21] 2026-01-23 20:51:50,926 | INFO     | --- collectZombieJob: --- 10, [1812821]
[2026-01-24 05:52:21] 2026-01-23 20:51:50,926 | INFO     | zombie collector waiting for pid 1812821
[2026-01-24 05:52:21] 2026-01-23 20:51:50,926 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-24 05:52:21] 2026-01-23 20:51:50,927 | INFO     | collected zombie processes
[2026-01-24 05:52:21] 2026-01-23 20:51:50,927 | INFO     | will attempt to kill all subprocesses of pid=1812821
[2026-01-24 05:52:21] 2026-01-23 20:51:50,998 | INFO     | process IDs to be killed: [1812821] (in reverse order)
[2026-01-24 05:52:21] 2026-01-23 20:51:51,029 | WARNING  | found no corresponding commands to process id(s)
[2026-01-24 05:52:21] 2026-01-23 20:51:51,029 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-24 05:52:21] 2026-01-23 20:51:51,031 | INFO     | did not find any defunct processes belonging to 1812821
[2026-01-24 05:52:21] 2026-01-23 20:51:51,034 | INFO     | did not find any defunct processes belonging to 1812821
[2026-01-24 05:52:21] 2026-01-23 20:51:51,034 | INFO     | ready for new job
[2026-01-24 05:52:21] 2026-01-23 20:51:51,034 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-24 05:52:21] 2026-01-23 20:51:51,035 | INFO     | **************************************
[2026-01-24 05:52:21] 2026-01-23 20:51:51,035 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-24 05:52:21] 2026-01-23 20:51:51,035 | INFO     | **************************************
[2026-01-24 05:52:21] 2026-01-23 20:51:51,035 | INFO     | 
[2026-01-24 05:52:21] 2026-01-23 20:51:51,036 | INFO     | architecture information:
[2026-01-24 05:52:21] 2026-01-23 20:51:51,036 | INFO     | executing command: cat /etc/os-release
[2026-01-24 05:52:21] 2026-01-23 20:51:51,047 | INFO     | cat /etc/os-release:
[2026-01-24 05:52:21] NAME="CentOS Linux"
[2026-01-24 05:52:21] VERSION="7 (Core)"
[2026-01-24 05:52:21] ID="centos"
[2026-01-24 05:52:21] ID_LIKE="rhel fedora"
[2026-01-24 05:52:21] VERSION_ID="7"
[2026-01-24 05:52:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-24 05:52:21] ANSI_COLOR="0;31"
[2026-01-24 05:52:21] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-24 05:52:21] HOME_URL="https://www.centos.org/"
[2026-01-24 05:52:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-24 05:52:21] 
[2026-01-24 05:52:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-24 05:52:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-24 05:52:21] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-24 05:52:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-24 05:52:21] 
[2026-01-24 05:52:21] 2026-01-23 20:51:51,047 | INFO     | **************************************
[2026-01-24 05:52:21] 2026-01-23 20:51:51,550 | INFO     | executing command: df -mP /var/lib/boinc/slots/1
[2026-01-24 05:52:21] 2026-01-23 20:51:51,562 | INFO     | sufficient remaining disk space (95472844800 B)
[2026-01-24 05:52:21] 2026-01-23 20:51:51,563 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-24 05:52:21] 2026-01-23 20:51:51,563 | INFO     | current server update state: UPDATING_FINAL
[2026-01-24 05:52:21] 2026-01-23 20:51:51,563 | INFO     | update_server=False
[2026-01-24 05:52:21] 2026-01-23 20:51:51,563 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-24 05:52:21] 2026-01-23 20:51:51,563 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-24 05:52:21] 2026-01-23 20:51:51,563 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-24 05:52:21] 2026-01-23 20:51:51,590 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-24 05:52:21] 2026-01-23 20:51:51,590 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-24 05:52:21] 2026-01-23 20:51:51,590 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-24 05:52:21] 2026-01-23 20:51:51,590 | INFO     | will abort loop
[2026-01-24 05:52:21] 2026-01-23 20:51:52,453 | INFO     | all data control threads have been joined
[2026-01-24 05:52:21] 2026-01-23 20:51:52,498 | INFO     | all payload control threads have been joined
[2026-01-24 05:52:21] 2026-01-23 20:51:52,568 | INFO     | [job] queue monitor thread has finished
[2026-01-24 05:52:21] 2026-01-23 20:51:52,568 | INFO     | [job] retrieve thread has finished
[2026-01-24 05:52:21] 2026-01-23 20:51:52,595 | INFO     | [job] job monitor thread has finished
[2026-01-24 05:52:21] 2026-01-23 20:51:52,717 | INFO     | [payload] execute_payloads thread has finished
[2026-01-24 05:52:21] 2026-01-23 20:51:52,799 | INFO     | [payload] validate_pre thread has finished
[2026-01-24 05:52:21] 2026-01-23 20:51:52,940 | INFO     | [data] copytool_in thread has finished
[2026-01-24 05:52:21] 2026-01-23 20:51:52,990 | INFO     | [payload] failed_post thread has finished
[2026-01-24 05:52:21] 2026-01-23 20:51:53,250 | INFO     | all job control threads have been joined
[2026-01-24 05:52:21] 2026-01-23 20:51:53,458 | INFO     | [data] control thread has finished
[2026-01-24 05:52:21] 2026-01-23 20:51:53,486 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-24 05:52:21] 2026-01-23 20:51:53,503 | INFO     | [payload] control thread has finished
[2026-01-24 05:52:21] 2026-01-23 20:51:53,531 | INFO     | [job] validate thread has finished
[2026-01-24 05:52:21] 2026-01-23 20:51:53,569 | INFO     | [data] copytool_out thread has finished
[2026-01-24 05:52:21] 2026-01-23 20:51:53,693 | INFO     | [payload] validate_post thread has finished
[2026-01-24 05:52:21] 2026-01-23 20:51:54,019 | INFO     | [job] create_data_payload thread has finished
[2026-01-24 05:52:21] 2026-01-23 20:51:54,255 | INFO     | [job] control thread has finished
[2026-01-24 05:52:21] 2026-01-23 20:51:57,491 | INFO     | [data] queue_monitor thread has finished
[2026-01-24 05:52:21] 2026-01-23 20:52:00,876 | INFO     | [monitor] cgroup control has ended
[2026-01-24 05:52:21] 2026-01-23 20:52:01,866 | INFO     | job.realtimelogging is not enabled
[2026-01-24 05:52:21] 2026-01-23 20:52:02,871 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-24 05:52:21] 2026-01-23 20:52:04,605 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139650295560000)>', '<ExcThread(monitor, started 139649846601472)>']
[2026-01-24 05:52:21] 2026-01-23 20:52:09,631 | INFO     | all workflow threads have been joined
[2026-01-24 05:52:21] 2026-01-23 20:52:09,631 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-24 05:52:21] 2026-01-23 20:52:09,631 | INFO     | traces error code: 0
[2026-01-24 05:52:21] 2026-01-23 20:52:09,631 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-24 05:52:21] 2026-01-23 20:52:21,560 | INFO     | PID=1808214 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-24 05:52:21] 2026-01-23 20:52:21,561 | INFO     | .. there are 2 such processes running
[2026-01-24 05:52:21] 2026-01-23 20:52:21,561 | INFO     | found 0 job(s) in 20 queues
[2026-01-24 05:52:21] 2026-01-23 20:52:21,561 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-24 05:52:21] 2026-01-23 20:52:21,561 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-24 05:52:21] 2026-01-23 20:52:21,561 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-24 05:52:21] 2026-01-23 20:52:21,561 | CRITICAL | thread 'MainThread' is not alive
[2026-01-24 05:52:21] 2026-01-23 20:52:21,561 | INFO     | [monitor] control thread has ended
[2026-01-24 05:52:21] 2026-01-23 20:52:21,656 [wrapper] ==== pilot stdout END ====
[2026-01-24 05:52:21] 2026-01-23 20:52:21,659 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-24 05:52:21] 2026-01-23 20:52:21,662 [wrapper] pilotpid: 1808214
[2026-01-24 05:52:21] 2026-01-23 20:52:21,664 [wrapper] Pilot exit status: 0
[2026-01-24 05:52:21] 2026-01-23 20:52:21,673 [wrapper] pandaids: 6978384964
[2026-01-24 05:52:21] 2026-01-23 20:52:21,704 [wrapper] cleanup supervisor_pilot 1817906 1808215
[2026-01-24 05:52:21] 2026-01-23 20:52:21,706 [wrapper] Test setup, not cleaning
[2026-01-24 05:52:21] 2026-01-23 20:52:21,708 [wrapper] apfmon messages muted
[2026-01-24 05:52:21] 2026-01-23 20:52:21,711 [wrapper] ==== wrapper stdout END ====
[2026-01-24 05:52:21] 2026-01-23 20:52:21,713 [wrapper] ==== wrapper stderr END ====
[2026-01-24 05:52:21]  *** Error codes and diagnostics ***
[2026-01-24 05:52:21]     "exeErrorCode": 0,
[2026-01-24 05:52:21]     "exeErrorDiag": "",
[2026-01-24 05:52:21]     "pilotErrorCode": 0,
[2026-01-24 05:52:21]     "pilotErrorDiag": "",
[2026-01-24 05:52:21]  *** Listing of results directory ***
[2026-01-24 05:52:21] total 669064
[2026-01-24 05:52:21] -rw-r--r--. 1 boinc boinc    584422 Jan 23 18:46 pilot3.tar.gz
[2026-01-24 05:52:21] -rwx------. 1 boinc boinc     36322 Jan 23 18:46 runpilot2-wrapper.sh
[2026-01-24 05:52:21] -rw-r--r--. 1 boinc boinc      5111 Jan 23 18:48 queuedata.json
[2026-01-24 05:52:21] -rw-r--r--. 1 boinc boinc       100 Jan 24 04:11 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-24 05:52:21] -rwxr-xr-x. 1 boinc boinc      7986 Jan 24 04:11 run_atlas
[2026-01-24 05:52:21] -rw-r--r--. 1 boinc boinc       105 Jan 24 04:11 job.xml
[2026-01-24 05:52:21] -rw-r--r--. 1 boinc boinc      9356 Jan 24 04:11 init_data.xml
[2026-01-24 05:52:21] -rw-r--r--. 2 boinc boinc 497388831 Jan 24 04:11 EVNT.48310824._000021.pool.root.1
[2026-01-24 05:52:21] -rw-r--r--. 2 boinc boinc     15845 Jan 24 04:11 start_atlas.sh
[2026-01-24 05:52:21] drwxrwx--x. 2 boinc boinc        68 Jan 24 04:11 shared
[2026-01-24 05:52:21] -rw-r--r--. 2 boinc boinc    597751 Jan 24 04:11 input.tar.gz
[2026-01-24 05:52:21] -rw-r--r--. 1 boinc boinc         0 Jan 24 04:11 boinc_lockfile
[2026-01-24 05:52:21] -rw-r--r--. 1 boinc boinc      2523 Jan 24 04:11 pandaJob.out
[2026-01-24 05:52:21] -rw-------. 1 boinc boinc   1004222 Jan 24 04:12 agis_schedconf.cvmfs.json
[2026-01-24 05:52:21] -rw-------. 1 boinc boinc   1516246 Jan 24 04:12 agis_ddmendpoints.agis.ALL.json
[2026-01-24 05:52:21] -rw-------. 1 boinc boinc       424 Jan 24 04:12 workernode_map.json
[2026-01-24 05:52:21] drwx------. 5 boinc boinc      4096 Jan 24 04:12 pilot3
[2026-01-24 05:52:21] -rw-------. 1 boinc boinc 181353424 Jan 24 05:51 HITS.48310826._000950.pool.root.1
[2026-01-24 05:52:21] -rw-------. 1 boinc boinc      1021 Jan 24 05:51 memory_monitor_summary.json
[2026-01-24 05:52:21] -rw-------. 1 boinc boinc    354954 Jan 24 05:51 log.48310826._000950.job.log.tgz.1
[2026-01-24 05:52:21] -rw-------. 1 boinc boinc        95 Jan 24 05:51 pilot_heartbeat.json
[2026-01-24 05:52:21] -rw-r--r--. 1 boinc boinc       530 Jan 24 05:51 boinc_task_state.xml
[2026-01-24 05:52:21] -rw-------. 1 boinc boinc      6302 Jan 24 05:51 heartbeat.json
[2026-01-24 05:52:21] -rw-r--r--. 1 boinc boinc      8192 Jan 24 05:52 boinc_mmap_file
[2026-01-24 05:52:21] -rw-r--r--. 1 boinc boinc        27 Jan 24 05:52 wrapper_checkpoint.txt
[2026-01-24 05:52:21] -rw-------. 1 boinc boinc       892 Jan 24 05:52 pilotlog.txt
[2026-01-24 05:52:21] -rw-------. 1 boinc boinc    872442 Jan 24 05:52 log.48310826._000950.job.log.1
[2026-01-24 05:52:21] -rw-------. 1 boinc boinc       357 Jan 24 05:52 output.list
[2026-01-24 05:52:21] -rw-r--r--. 1 boinc boinc       620 Jan 24 05:52 runtime_log
[2026-01-24 05:52:21] -rw-------. 1 boinc boinc   1249280 Jan 24 05:52 result.tar.gz
[2026-01-24 05:52:21] -rw-r--r--. 1 boinc boinc      8774 Jan 24 05:52 runtime_log.err
[2026-01-24 05:52:21] -rw-------. 1 boinc boinc       643 Jan 24 05:52 9CtMDmpvS38n9Rq4apOajLDm4fhM0noT9bVo0NGKDmqlvKDm8aCiqm.diag
[2026-01-24 05:52:21] -rw-r--r--. 1 boinc boinc     21304 Jan 24 05:52 stderr.txt
[2026-01-24 05:52:21] HITS file was successfully produced:
[2026-01-24 05:52:21] -rw-------. 1 boinc boinc 181353424 Jan 24 05:51 shared/HITS.pool.root.1
[2026-01-24 05:52:21]  *** Contents of shared directory: ***
[2026-01-24 05:52:21] total 664656
[2026-01-24 05:52:21] -rw-r--r--. 2 boinc boinc 497388831 Jan 24 04:11 ATLAS.root_0
[2026-01-24 05:52:21] -rw-r--r--. 2 boinc boinc     15845 Jan 24 04:11 start_atlas.sh
[2026-01-24 05:52:21] -rw-r--r--. 2 boinc boinc    597751 Jan 24 04:11 input.tar.gz
[2026-01-24 05:52:21] -rw-------. 1 boinc boinc 181353424 Jan 24 05:51 HITS.pool.root.1
[2026-01-24 05:52:21] -rw-------. 1 boinc boinc   1249280 Jan 24 05:52 result.tar.gz
05:52:22 (1804078): run_atlas exited; CPU time 32971.566842
05:52:22 (1804078): called boinc_finish(0)

</stderr_txt>
]]>

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