Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
11:56:19 (28551): wrapper (7.7.26015): starting
11:56:19 (28551): wrapper: running run_atlas (--nthreads 8)
[2026-01-23 11:56:19] Arguments: --nthreads 8
[2026-01-23 11:56:19] Threads: 8
[2026-01-23 11:56:19] Checking for CVMFS
[2026-01-23 11:56:20] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-23 11:56:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-23 11:56:20] Running cvmfs_config stat atlas.cern.ch
[2026-01-23 11:56:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-23 11:56:20] 2.11.2.0 24877 201471 140876 155442 3 188 10771499 18432000 1833 130560 0 135164269 99.981 7573929 29936 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-23 11:56:20] CVMFS is ok
[2026-01-23 11:56:20] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-23 11:56:20] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-23 11:56:20] Further information can be found at the LHC@home message board.
[2026-01-23 11:56:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-23 11:56:20] Checking for apptainer binary...
[2026-01-23 11:56:20] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-23 11:56:20] Running /usr/bin/apptainer --version
[2026-01-23 11:56:20] apptainer version 1.3.2-1.el7
[2026-01-23 11:56:20] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-23 11:56:21] c-206-3.aglt2.org
[2026-01-23 11:56:21] apptainer works
[2026-01-23 11:56:21] Set ATHENA_PROC_NUMBER=8
[2026-01-23 11:56:21] Set ATHENA_CORE_NUMBER=8
[2026-01-23 11:56:21] Starting ATLAS job with PandaID=6981169038
[2026-01-23 11:56:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-23 17:22:14]  *** The last 200 lines of the pilot log: ***
[2026-01-23 17:22:14] 2026-01-23 22:21:07,252 | INFO     | fitting pss+swap vs Time
[2026-01-23 17:22:14] 2026-01-23 22:21:07,253 | INFO     | sum of square deviations: 10065751520.0
[2026-01-23 17:22:14] 2026-01-23 22:21:07,256 | INFO     | sum of deviations: 106839020533.00002
[2026-01-23 17:22:14] 2026-01-23 22:21:07,257 | INFO     | mean x: 1769197106.0
[2026-01-23 17:22:14] 2026-01-23 22:21:07,257 | INFO     | mean y: 2553878.8746081507
[2026-01-23 17:22:14] 2026-01-23 22:21:07,257 | INFO     | intersect: -18775903502.999866
[2026-01-23 17:22:14] 2026-01-23 22:21:07,258 | INFO     | chi2: 1.6578491198107306
[2026-01-23 17:22:14] 2026-01-23 22:21:07,258 | INFO     | sum of square deviations: 9599817202.5
[2026-01-23 17:22:14] 2026-01-23 22:21:07,262 | INFO     | sum of deviations: 105040937959.49997
[2026-01-23 17:22:14] 2026-01-23 22:21:07,262 | INFO     | mean x: 1769196953.5
[2026-01-23 17:22:14] 2026-01-23 22:21:07,262 | INFO     | mean y: 2553290.296178344
[2026-01-23 17:22:14] 2026-01-23 22:21:07,262 | INFO     | intersect: -19355951513.55921
[2026-01-23 17:22:14] 2026-01-23 22:21:07,263 | INFO     | chi2: 1.6567931183771334
[2026-01-23 17:22:14] 2026-01-23 22:21:07,263 | INFO     | current chi2=1.6567931183771334 (change=0.06369707719347499 %)
[2026-01-23 17:22:14] 2026-01-23 22:21:07,263 | INFO     | right removable region: 313
[2026-01-23 17:22:14] 2026-01-23 22:21:07,264 | INFO     | sum of square deviations: 9599817202.5
[2026-01-23 17:22:14] 2026-01-23 22:21:07,268 | INFO     | sum of deviations: 48877925060.0
[2026-01-23 17:22:14] 2026-01-23 22:21:07,268 | INFO     | mean x: 1769197258.5
[2026-01-23 17:22:14] 2026-01-23 22:21:07,268 | INFO     | mean y: 2572745.891719745
[2026-01-23 17:22:14] 2026-01-23 22:21:07,268 | INFO     | intersect: -9005379092.48293
[2026-01-23 17:22:14] 2026-01-23 22:21:07,269 | INFO     | chi2: 0.09414624162781707
[2026-01-23 17:22:14] 2026-01-23 22:21:07,269 | INFO     | current chi2=0.09414624162781707 (change=94.32118155368894 %)
[2026-01-23 17:22:14] 2026-01-23 22:21:07,270 | INFO     | sum of square deviations: 9148487810.0
[2026-01-23 17:22:14] 2026-01-23 22:21:07,273 | INFO     | sum of deviations: 34204545067.0
[2026-01-23 17:22:14] 2026-01-23 22:21:07,273 | INFO     | mean x: 1769197411.0
[2026-01-23 17:22:14] 2026-01-23 22:21:07,273 | INFO     | mean y: 2577703.6828478966
[2026-01-23 17:22:14] 2026-01-23 22:21:07,274 | INFO     | intersect: -6612132162.446298
[2026-01-23 17:22:14] 2026-01-23 22:21:07,274 | INFO     | chi2: 0.038181777698022806
[2026-01-23 17:22:14] 2026-01-23 22:21:07,275 | INFO     | current chi2=0.038181777698022806 (change=59.444182754565354 %)
[2026-01-23 17:22:14] 2026-01-23 22:21:07,275 | INFO     | sum of square deviations: 8711530780.0
[2026-01-23 17:22:14] 2026-01-23 22:21:07,278 | INFO     | sum of deviations: 25390829679.499996
[2026-01-23 17:22:14] 2026-01-23 22:21:07,279 | INFO     | mean x: 1769197563.5
[2026-01-23 17:22:14] 2026-01-23 22:21:07,279 | INFO     | mean y: 2580766.7072368423
[2026-01-23 17:22:14] 2026-01-23 22:21:07,279 | INFO     | intersect: -5153963489.251287
[2026-01-23 17:22:14] 2026-01-23 22:21:07,280 | INFO     | chi2: 0.011938091203866871
[2026-01-23 17:22:14] 2026-01-23 22:21:07,280 | INFO     | current chi2=0.011938091203866871 (change=68.73353750502541 %)
[2026-01-23 17:22:14] 2026-01-23 22:21:07,280 | INFO     | sum of square deviations: 8288713550.0
[2026-01-23 17:22:14] 2026-01-23 22:21:07,284 | INFO     | sum of deviations: 22441761591.0
[2026-01-23 17:22:14] 2026-01-23 22:21:07,284 | INFO     | mean x: 1769197716.0
[2026-01-23 17:22:14] 2026-01-23 22:21:07,284 | INFO     | mean y: 2581827.9096989967
[2026-01-23 17:22:14] 2026-01-23 22:21:07,284 | INFO     | intersect: -4787535855.649739
[2026-01-23 17:22:14] 2026-01-23 22:21:07,285 | INFO     | chi2: 0.010607791786745728
[2026-01-23 17:22:14] 2026-01-23 22:21:07,285 | INFO     | current chi2=0.010607791786745728 (change=11.143317590757269 %)
[2026-01-23 17:22:14] 2026-01-23 22:21:07,285 | INFO     | left removable region: 40
[2026-01-23 17:22:14] 2026-01-23 22:21:07,286 | INFO     | sum of square deviations: 6309000152.0
[2026-01-23 17:22:14] 2026-01-23 22:21:07,289 | INFO     | sum of deviations: 11005968980.999998
[2026-01-23 17:22:14] 2026-01-23 22:21:07,289 | INFO     | mean x: 1769198143.0
[2026-01-23 17:22:14] 2026-01-23 22:21:07,289 | INFO     | mean y: 2586114.2161172163
[2026-01-23 17:22:14] 2026-01-23 22:21:07,289 | INFO     | intersect: -3083757111.9649935
[2026-01-23 17:22:14] 2026-01-23 22:21:07,290 | INFO     | chi2: 0.004277224394937707
[2026-01-23 17:22:14] 2026-01-23 22:21:07,290 | INFO     | current memory leak: 1.74 B/s (using 273 data points, chi2=0.00)
[2026-01-23 17:22:14] 2026-01-23 22:21:07,291 | INFO     | could have reported an average CPU frequency of 2400 MHz (14 samples)
[2026-01-23 17:22:14] 2026-01-23 22:21:07,291 | INFO     | ..............................
[2026-01-23 17:22:14] 2026-01-23 22:21:07,291 | INFO     | . Timing measurements:
[2026-01-23 17:22:14] 2026-01-23 22:21:07,291 | INFO     | . get job = 0 s
[2026-01-23 17:22:14] 2026-01-23 22:21:07,291 | INFO     | . initial setup = 6 s
[2026-01-23 17:22:14] 2026-01-23 22:21:07,291 | INFO     | . payload setup = 5 s
[2026-01-23 17:22:14] 2026-01-23 22:21:07,292 | INFO     | . stage-in = 0 s
[2026-01-23 17:22:14] 2026-01-23 22:21:07,292 | INFO     | . payload execution = 19457 s
[2026-01-23 17:22:14] 2026-01-23 22:21:07,292 | INFO     | . stage-out = 2 s
[2026-01-23 17:22:14] 2026-01-23 22:21:07,292 | INFO     | . log creation = 0 s
[2026-01-23 17:22:14] 2026-01-23 22:21:07,292 | INFO     | ..............................
[2026-01-23 17:22:14] 2026-01-23 22:21:07,445 | INFO     | 
[2026-01-23 17:22:14] 2026-01-23 22:21:07,446 | INFO     | job summary report
[2026-01-23 17:22:14] 2026-01-23 22:21:07,446 | INFO     | --------------------------------------------------
[2026-01-23 17:22:14] 2026-01-23 22:21:07,446 | INFO     | PanDA job id: 6981169038
[2026-01-23 17:22:14] 2026-01-23 22:21:07,446 | INFO     | task id: 48313004
[2026-01-23 17:22:14] 2026-01-23 22:21:07,446 | INFO     | errors: (none)
[2026-01-23 17:22:14] 2026-01-23 22:21:07,446 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-23 17:22:14] 2026-01-23 22:21:07,447 | INFO     | pilot state: finished 
[2026-01-23 17:22:14] 2026-01-23 22:21:07,447 | INFO     | transexitcode: 0
[2026-01-23 17:22:14] 2026-01-23 22:21:07,447 | INFO     | exeerrorcode: 0
[2026-01-23 17:22:14] 2026-01-23 22:21:07,447 | INFO     | exeerrordiag: 
[2026-01-23 17:22:14] 2026-01-23 22:21:07,447 | INFO     | exitcode: 0
[2026-01-23 17:22:14] 2026-01-23 22:21:07,447 | INFO     | exitmsg: OK
[2026-01-23 17:22:14] 2026-01-23 22:21:07,448 | INFO     | cpuconsumptiontime: 147909 s
[2026-01-23 17:22:14] 2026-01-23 22:21:07,448 | INFO     | nevents: 400
[2026-01-23 17:22:14] 2026-01-23 22:21:07,448 | INFO     | neventsw: 0
[2026-01-23 17:22:14] 2026-01-23 22:21:07,448 | INFO     | pid: 4642
[2026-01-23 17:22:14] 2026-01-23 22:21:07,448 | INFO     | pgrp: 4642
[2026-01-23 17:22:14] 2026-01-23 22:21:07,449 | INFO     | corecount: 8
[2026-01-23 17:22:14] 2026-01-23 22:21:07,449 | INFO     | event service: False
[2026-01-23 17:22:14] 2026-01-23 22:21:07,449 | INFO     | sizes: {0: 2283903, 1: 2284364, 19466: 2317480, 19469: 2326534, 19470: 2326672}
[2026-01-23 17:22:14] 2026-01-23 22:21:07,449 | INFO     | --------------------------------------------------
[2026-01-23 17:22:14] 2026-01-23 22:21:07,449 | INFO     | 
[2026-01-23 17:22:14] 2026-01-23 22:21:07,449 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-01-23 17:22:14] 2026-01-23 22:21:07,468 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-23 17:22:14] 2026-01-23 22:21:07,468 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-23 17:22:14] 2026-01-23 22:21:07,469 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-23 17:22:14] 2026-01-23 22:21:07,469 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-23 17:22:14] 2026-01-23 22:21:07,469 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-23 17:22:14] 2026-01-23 22:21:07,469 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-23 17:22:14] 2026-01-23 22:21:07,469 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-23 17:22:14] 2026-01-23 22:21:07,470 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-23 17:22:14] 2026-01-23 22:21:07,470 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-23 17:22:14] 2026-01-23 22:21:07,470 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-23 17:22:14] 2026-01-23 22:21:07,470 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-23 17:22:14] 2026-01-23 22:21:07,470 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-23 17:22:14] 2026-01-23 22:21:07,470 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-23 17:22:14] 2026-01-23 22:21:07,471 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-23 17:22:14] 2026-01-23 22:21:07,471 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-23 17:22:14] 2026-01-23 22:21:07,471 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-23 17:22:14] 2026-01-23 22:21:07,471 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-23 17:22:14] 2026-01-23 22:21:07,471 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-23 17:22:14] 2026-01-23 22:21:07,471 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-23 17:22:14] 2026-01-23 22:21:07,472 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-23 17:22:14] 2026-01-23 22:21:07,472 | INFO     | job 6981169038 has completed (purged errors)
[2026-01-23 17:22:14] 2026-01-23 22:21:07,472 | INFO     | overall cleanup function is called
[2026-01-23 17:22:14] 2026-01-23 22:21:08,480 | INFO     | --- collectZombieJob: --- 10, [4642]
[2026-01-23 17:22:14] 2026-01-23 22:21:08,480 | INFO     | zombie collector waiting for pid 4642
[2026-01-23 17:22:14] 2026-01-23 22:21:08,481 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-23 17:22:14] 2026-01-23 22:21:08,481 | INFO     | collected zombie processes
[2026-01-23 17:22:14] 2026-01-23 22:21:08,481 | INFO     | will attempt to kill all subprocesses of pid=4642
[2026-01-23 17:22:14] 2026-01-23 22:21:08,625 | INFO     | process IDs to be killed: [4642] (in reverse order)
[2026-01-23 17:22:14] 2026-01-23 22:21:08,680 | WARNING  | found no corresponding commands to process id(s)
[2026-01-23 17:22:14] 2026-01-23 22:21:08,681 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-23 17:22:14] 2026-01-23 22:21:08,686 | INFO     | did not find any defunct processes belonging to 4642
[2026-01-23 17:22:14] 2026-01-23 22:21:08,691 | INFO     | did not find any defunct processes belonging to 4642
[2026-01-23 17:22:14] 2026-01-23 22:21:08,691 | INFO     | ready for new job
[2026-01-23 17:22:14] 2026-01-23 22:21:08,691 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-23 17:22:14] 2026-01-23 22:21:08,694 | INFO     | **************************************
[2026-01-23 17:22:14] 2026-01-23 22:21:08,694 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-23 17:22:14] 2026-01-23 22:21:08,694 | INFO     | **************************************
[2026-01-23 17:22:14] 2026-01-23 22:21:08,694 | INFO     | 
[2026-01-23 17:22:14] 2026-01-23 22:21:08,695 | INFO     | architecture information:
[2026-01-23 17:22:14] 2026-01-23 22:21:08,696 | INFO     | executing command: cat /etc/os-release
[2026-01-23 17:22:14] 2026-01-23 22:21:08,706 | INFO     | cat /etc/os-release:
[2026-01-23 17:22:14] NAME="CentOS Linux"
[2026-01-23 17:22:14] VERSION="7 (Core)"
[2026-01-23 17:22:14] ID="centos"
[2026-01-23 17:22:14] ID_LIKE="rhel fedora"
[2026-01-23 17:22:14] VERSION_ID="7"
[2026-01-23 17:22:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-23 17:22:14] ANSI_COLOR="0;31"
[2026-01-23 17:22:14] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-23 17:22:14] HOME_URL="https://www.centos.org/"
[2026-01-23 17:22:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-23 17:22:14] 
[2026-01-23 17:22:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-23 17:22:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-23 17:22:14] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-23 17:22:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-23 17:22:14] 
[2026-01-23 17:22:14] 2026-01-23 22:21:08,706 | INFO     | **************************************
[2026-01-23 17:22:14] 2026-01-23 22:21:09,209 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-01-23 17:22:14] 2026-01-23 22:21:09,226 | INFO     | sufficient remaining disk space (27282898944 B)
[2026-01-23 17:22:14] 2026-01-23 22:21:09,226 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-23 17:22:14] 2026-01-23 22:21:09,227 | INFO     | current server update state: UPDATING_FINAL
[2026-01-23 17:22:14] 2026-01-23 22:21:09,227 | INFO     | update_server=False
[2026-01-23 17:22:14] 2026-01-23 22:21:09,227 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-23 17:22:14] 2026-01-23 22:21:09,227 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-23 17:22:14] 2026-01-23 22:21:09,228 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-23 17:22:14] 2026-01-23 22:21:09,448 | INFO     | all job control threads have been joined
[2026-01-23 17:22:14] 2026-01-23 22:21:09,544 | INFO     | all payload control threads have been joined
[2026-01-23 17:22:14] 2026-01-23 22:21:09,632 | INFO     | all data control threads have been joined
[2026-01-23 17:22:14] 2026-01-23 22:21:09,707 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-23 17:22:14] 2026-01-23 22:21:09,708 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-23 17:22:14] 2026-01-23 22:21:09,708 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-23 17:22:14] 2026-01-23 22:21:09,708 | INFO     | will abort loop
[2026-01-23 17:22:14] 2026-01-23 22:21:09,771 | INFO     | job.realtimelogging is not enabled
[2026-01-23 17:22:14] 2026-01-23 22:21:10,092 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-23 17:22:14] 2026-01-23 22:21:10,232 | INFO     | [job] retrieve thread has finished
[2026-01-23 17:22:14] 2026-01-23 22:21:10,233 | INFO     | [job] queue monitor thread has finished
[2026-01-23 17:22:14] 2026-01-23 22:21:10,236 | INFO     | [data] copytool_in thread has finished
[2026-01-23 17:22:14] 2026-01-23 22:21:10,250 | INFO     | [job] create_data_payload thread has finished
[2026-01-23 17:22:14] 2026-01-23 22:21:10,305 | INFO     | [payload] validate_pre thread has finished
[2026-01-23 17:22:14] 2026-01-23 22:21:10,453 | INFO     | [job] control thread has finished
[2026-01-23 17:22:14] 2026-01-23 22:21:10,550 | INFO     | [payload] control thread has finished
[2026-01-23 17:22:14] 2026-01-23 22:21:10,631 | INFO     | [payload] execute_payloads thread has finished
[2026-01-23 17:22:14] 2026-01-23 22:21:10,638 | INFO     | [data] control thread has finished
[2026-01-23 17:22:14] 2026-01-23 22:21:10,673 | INFO     | [job] validate thread has finished
[2026-01-23 17:22:14] 2026-01-23 22:21:10,709 | INFO     | [job] job monitor thread has finished
[2026-01-23 17:22:14] 2026-01-23 22:21:10,777 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-23 17:22:14] 2026-01-23 22:21:11,153 | INFO     | [payload] validate_post thread has finished
[2026-01-23 17:22:14] 2026-01-23 22:21:11,230 | INFO     | [payload] failed_post thread has finished
[2026-01-23 17:22:14] 2026-01-23 22:21:12,098 | INFO     | [data] copytool_out thread has finished
[2026-01-23 17:22:14] 2026-01-23 22:21:13,234 | INFO     | [data] queue_monitor thread has finished
[2026-01-23 17:22:14] 2026-01-23 22:21:40,066 | INFO     | PID=32537 has CPU usage=6.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-23 17:22:14] 2026-01-23 22:21:40,066 | INFO     | .. there are 3 such processes running
[2026-01-23 17:22:14] 2026-01-23 22:21:40,067 | INFO     | found 0 job(s) in 20 queues
[2026-01-23 17:22:14] 2026-01-23 22:21:40,067 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-23 17:22:14] 2026-01-23 22:21:40,067 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-23 17:22:14] 2026-01-23 22:22:08,128 | INFO     | [monitor] cgroup control has ended
[2026-01-23 17:22:14] 2026-01-23 22:22:09,084 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139919196583744)>', '<ExcThread(monitor, started 139918600816384)>']
[2026-01-23 17:22:14] 2026-01-23 22:22:09,197 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-23 17:22:14] 2026-01-23 22:22:09,197 | INFO     | [monitor] control thread has ended
[2026-01-23 17:22:14] 2026-01-23 22:22:14,110 | INFO     | all workflow threads have been joined
[2026-01-23 17:22:14] 2026-01-23 22:22:14,110 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-23 17:22:14] 2026-01-23 22:22:14,111 | INFO     | traces error code: 0
[2026-01-23 17:22:14] 2026-01-23 22:22:14,111 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-23 17:22:14] 2026-01-23 22:22:14,224 [wrapper] ==== pilot stdout END ====
[2026-01-23 17:22:14] 2026-01-23 22:22:14,227 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-23 17:22:14] 2026-01-23 22:22:14,229 [wrapper] pilotpid: 32537
[2026-01-23 17:22:14] 2026-01-23 22:22:14,232 [wrapper] Pilot exit status: 0
[2026-01-23 17:22:14] 2026-01-23 22:22:14,240 [wrapper] pandaids: 6981169038
[2026-01-23 17:22:14] 2026-01-23 22:22:14,267 [wrapper] cleanup supervisor_pilot 23834 32538
[2026-01-23 17:22:14] 2026-01-23 22:22:14,270 [wrapper] Test setup, not cleaning
[2026-01-23 17:22:14] 2026-01-23 22:22:14,272 [wrapper] apfmon messages muted
[2026-01-23 17:22:14] 2026-01-23 22:22:14,274 [wrapper] ==== wrapper stdout END ====
[2026-01-23 17:22:14] 2026-01-23 22:22:14,276 [wrapper] ==== wrapper stderr END ====
[2026-01-23 17:22:14]  *** Error codes and diagnostics ***
[2026-01-23 17:22:14]     "exeErrorCode": 0,
[2026-01-23 17:22:14]     "exeErrorDiag": "",
[2026-01-23 17:22:14]     "pilotErrorCode": 0,
[2026-01-23 17:22:14]     "pilotErrorDiag": "",
[2026-01-23 17:22:14]  *** Listing of results directory ***
[2026-01-23 17:22:14] total 682556
[2026-01-23 17:22:14] -rw-r--r-- 1 boincer umatlas      5111 Jan 23 04:46 queuedata.json
[2026-01-23 17:22:14] -rw-r--r-- 1 boincer umatlas    584422 Jan 23 04:46 pilot3.tar.gz
[2026-01-23 17:22:14] -rwx------ 1 boincer umatlas     36322 Jan 23 04:46 runpilot2-wrapper.sh
[2026-01-23 17:22:14] -rw-r--r-- 1 boincer umatlas       100 Jan 23 11:56 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-23 17:22:14] -rwxr-xr-x 1 boincer umatlas      7986 Jan 23 11:56 run_atlas
[2026-01-23 17:22:14] -rw-r--r-- 1 boincer umatlas       105 Jan 23 11:56 job.xml
[2026-01-23 17:22:14] -rw-r--r-- 2 boincer umatlas 344157993 Jan 23 11:56 EVNT.48313002._000008.pool.root.1
[2026-01-23 17:22:14] -rw-r--r-- 2 boincer umatlas     15845 Jan 23 11:56 start_atlas.sh
[2026-01-23 17:22:14] drwxrwx--x 2 boincer umatlas      4096 Jan 23 11:56 shared
[2026-01-23 17:22:14] -rw-r--r-- 2 boincer umatlas    597776 Jan 23 11:56 input.tar.gz
[2026-01-23 17:22:14] -rw-r--r-- 1 boincer umatlas         0 Jan 23 11:56 boinc_lockfile
[2026-01-23 17:22:14] -rw-r--r-- 1 boincer umatlas      2628 Jan 23 11:56 pandaJob.out
[2026-01-23 17:22:14] -rw------- 1 boincer umatlas        57 Jan 23 11:56 setup.sh.local
[2026-01-23 17:22:14] -rw------- 1 boincer umatlas   1004246 Jan 23 11:56 agis_schedconf.cvmfs.json
[2026-01-23 17:22:14] -rw------- 1 boincer umatlas       444 Jan 23 11:56 workernode_map.json
[2026-01-23 17:22:14] drwx------ 5 boincer umatlas      4096 Jan 23 11:56 pilot3
[2026-01-23 17:22:14] -rw-r--r-- 1 boincer umatlas      5952 Jan 23 17:19 init_data.xml
[2026-01-23 17:22:14] -rw-r--r-- 1 boincer umatlas       532 Jan 23 17:20 boinc_task_state.xml
[2026-01-23 17:22:14] -rw------- 1 boincer umatlas 344192648 Jan 23 17:20 HITS.48313004._000386.pool.root.1
[2026-01-23 17:22:14] -rw------- 1 boincer umatlas      1055 Jan 23 17:21 memory_monitor_summary.json
[2026-01-23 17:22:14] -rw------- 1 boincer umatlas   1516246 Jan 23 17:21 agis_ddmendpoints.agis.ALL.json
[2026-01-23 17:22:14] -rw------- 1 boincer umatlas    602382 Jan 23 17:21 log.48313004._000386.job.log.tgz.1
[2026-01-23 17:22:14] -rw------- 1 boincer umatlas      6412 Jan 23 17:21 heartbeat.json
[2026-01-23 17:22:14] -rw------- 1 boincer umatlas        95 Jan 23 17:21 pilot_heartbeat.json
[2026-01-23 17:22:14] -rw-r--r-- 1 boincer umatlas      8192 Jan 23 17:21 boinc_mmap_file
[2026-01-23 17:22:14] -rw-r--r-- 1 boincer umatlas        29 Jan 23 17:21 wrapper_checkpoint.txt
[2026-01-23 17:22:14] -rw------- 1 boincer umatlas      5075 Jan 23 17:22 pilotlog.txt
[2026-01-23 17:22:14] -rw------- 1 boincer umatlas   2716969 Jan 23 17:22 log.48313004._000386.job.log.1
[2026-01-23 17:22:14] -rw------- 1 boincer umatlas       357 Jan 23 17:22 output.list
[2026-01-23 17:22:14] -rw-r--r-- 1 boincer umatlas       620 Jan 23 17:22 runtime_log
[2026-01-23 17:22:14] -rw------- 1 boincer umatlas   3338240 Jan 23 17:22 result.tar.gz
[2026-01-23 17:22:14] -rw------- 1 boincer umatlas       662 Jan 23 17:22 RvWMDmBvS38nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmmK2KDm4dV71n.diag
[2026-01-23 17:22:14] -rw-r--r-- 1 boincer umatlas      9337 Jan 23 17:22 runtime_log.err
[2026-01-23 17:22:14] -rw-r--r-- 1 boincer umatlas     20876 Jan 23 17:22 stderr.txt
[2026-01-23 17:22:14] HITS file was successfully produced:
[2026-01-23 17:22:14] -rw------- 1 boincer umatlas 344192648 Jan 23 17:20 shared/HITS.pool.root.1
[2026-01-23 17:22:14]  *** Contents of shared directory: ***
[2026-01-23 17:22:14] total 676088
[2026-01-23 17:22:14] -rw-r--r-- 2 boincer umatlas 344157993 Jan 23 11:56 ATLAS.root_0
[2026-01-23 17:22:14] -rw-r--r-- 2 boincer umatlas     15845 Jan 23 11:56 start_atlas.sh
[2026-01-23 17:22:14] -rw-r--r-- 2 boincer umatlas    597776 Jan 23 11:56 input.tar.gz
[2026-01-23 17:22:14] -rw------- 1 boincer umatlas 344192648 Jan 23 17:20 HITS.pool.root.1
[2026-01-23 17:22:14] -rw------- 1 boincer umatlas   3338240 Jan 23 17:22 result.tar.gz
17:22:15 (28551): run_atlas exited; CPU time 148170.670878
17:22:15 (28551): called boinc_finish(0)

</stderr_txt>
]]>

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