Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
11:46:56 (13892): wrapper (7.7.26015): starting
11:46:56 (13892): wrapper: running run_atlas (--nthreads 8)
[2026-01-23 11:46:56] Arguments: --nthreads 8
[2026-01-23 11:46:56] Threads: 8
[2026-01-23 11:46:56] Checking for CVMFS
[2026-01-23 11:46:56] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-23 11:46:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-23 11:46:56] Running cvmfs_config stat atlas.cern.ch
[2026-01-23 11:46:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-23 11:46:56] 2.11.2.0 24877 201462 140800 155442 1 50 10767724 18432001 1833 130560 0 135113219 99.981 7573498 29937 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-23 11:46:56] CVMFS is ok
[2026-01-23 11:46:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-23 11:46:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-23 11:46:56] Further information can be found at the LHC@home message board.
[2026-01-23 11:46:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-23 11:46:56] Checking for apptainer binary...
[2026-01-23 11:46:56] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-23 11:46:56] Running /usr/bin/apptainer --version
[2026-01-23 11:46:56] apptainer version 1.3.2-1.el7
[2026-01-23 11:46:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-23 11:46:57] c-206-3.aglt2.org
[2026-01-23 11:46:57] apptainer works
[2026-01-23 11:46:57] Set ATHENA_PROC_NUMBER=8
[2026-01-23 11:46:57] Set ATHENA_CORE_NUMBER=8
[2026-01-23 11:46:57] Starting ATLAS job with PandaID=6978138077
[2026-01-23 11:46:57] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-23 14:44:35]  *** The last 200 lines of the pilot log: ***
[2026-01-23 14:44:35] 2026-01-23 19:43:47,215 | INFO     | total number of processed events: 400 (read)
[2026-01-23 14:44:35] 2026-01-23 19:43:47,220 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6978138077/memory_monitor_summary.json (trf name=prmon)
[2026-01-23 14:44:35] 2026-01-23 19:43:47,221 | INFO     | extracted standard info from prmon json
[2026-01-23 14:44:35] 2026-01-23 19:43:47,221 | INFO     | extracted standard memory fields from prmon json
[2026-01-23 14:44:35] 2026-01-23 19:43:47,221 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-23 14:44:35] 2026-01-23 19:43:47,222 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-23 14:44:35] 2026-01-23 19:43:47,222 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-23 14:44:35] 2026-01-23 19:43:47,227 | INFO     | fitting pss+swap vs Time
[2026-01-23 14:44:35] 2026-01-23 19:43:47,228 | INFO     | sum of square deviations: 1633472487.5
[2026-01-23 14:44:35] 2026-01-23 19:43:47,229 | INFO     | sum of deviations: 6250008302.5
[2026-01-23 14:44:35] 2026-01-23 19:43:47,229 | INFO     | mean x: 1769192129.5
[2026-01-23 14:44:35] 2026-01-23 19:43:47,229 | INFO     | mean y: 2476744.5
[2026-01-23 14:44:35] 2026-01-23 19:43:47,230 | INFO     | intersect: -6766823370.873174
[2026-01-23 14:44:35] 2026-01-23 19:43:47,230 | INFO     | chi2: 2.12633435816554
[2026-01-23 14:44:35] 2026-01-23 19:43:47,231 | INFO     | sum of square deviations: 1496660620.0
[2026-01-23 14:44:35] 2026-01-23 19:43:47,232 | INFO     | sum of deviations: 17239334439.999996
[2026-01-23 14:44:35] 2026-01-23 19:43:47,232 | INFO     | mean x: 1769191977.0
[2026-01-23 14:44:35] 2026-01-23 19:43:47,232 | INFO     | mean y: 2488694.7100591715
[2026-01-23 14:44:35] 2026-01-23 19:43:47,233 | INFO     | intersect: -20376007119.569984
[2026-01-23 14:44:35] 2026-01-23 19:43:47,233 | INFO     | chi2: 1.3530582989061852
[2026-01-23 14:44:35] 2026-01-23 19:43:47,233 | INFO     | current chi2=1.3530582989061852 (change=36.36662579851674 %)
[2026-01-23 14:44:35] 2026-01-23 19:43:47,234 | INFO     | sum of square deviations: 1367709365.0
[2026-01-23 14:44:35] 2026-01-23 19:43:47,235 | INFO     | sum of deviations: 16619957581.000002
[2026-01-23 14:44:35] 2026-01-23 19:43:47,235 | INFO     | mean x: 1769191824.5
[2026-01-23 14:44:35] 2026-01-23 19:43:47,235 | INFO     | mean y: 2487962.012195122
[2026-01-23 14:44:35] 2026-01-23 19:43:47,236 | INFO     | intersect: -21496153363.619144
[2026-01-23 14:44:35] 2026-01-23 19:43:47,236 | INFO     | chi2: 1.3542702461446803
[2026-01-23 14:44:35] 2026-01-23 19:43:47,236 | INFO     | current chi2=1.3542702461446803 (change=-0.08957095488603768 %)
[2026-01-23 14:44:35] 2026-01-23 19:43:47,236 | INFO     | right removable region: 163
[2026-01-23 14:44:35] 2026-01-23 19:43:47,237 | INFO     | sum of square deviations: 1496660620.0
[2026-01-23 14:44:35] 2026-01-23 19:43:47,238 | INFO     | sum of deviations: -17517842994.0
[2026-01-23 14:44:35] 2026-01-23 19:43:47,238 | INFO     | mean x: 1769192282.0
[2026-01-23 14:44:35] 2026-01-23 19:43:47,239 | INFO     | mean y: 2502864.0887573967
[2026-01-23 14:44:35] 2026-01-23 19:43:47,239 | INFO     | intersect: 20710225248.25396
[2026-01-23 14:44:35] 2026-01-23 19:43:47,239 | INFO     | chi2: 0.8415332408221716
[2026-01-23 14:44:35] 2026-01-23 19:43:47,239 | INFO     | current chi2=0.8415332408221716 (change=60.42328726004359 %)
[2026-01-23 14:44:35] 2026-01-23 19:43:47,240 | INFO     | sum of square deviations: 1367709365.0
[2026-01-23 14:44:35] 2026-01-23 19:43:47,241 | INFO     | sum of deviations: -12396641460.5
[2026-01-23 14:44:35] 2026-01-23 19:43:47,241 | INFO     | mean x: 1769192434.5
[2026-01-23 14:44:35] 2026-01-23 19:43:47,241 | INFO     | mean y: 2496794.213414634
[2026-01-23 14:44:35] 2026-01-23 19:43:47,242 | INFO     | intersect: 16038099712.765945
[2026-01-23 14:44:35] 2026-01-23 19:43:47,242 | INFO     | chi2: 0.8187011787844365
[2026-01-23 14:44:35] 2026-01-23 19:43:47,242 | INFO     | current chi2=0.8187011787844365 (change=2.7131503463164903 %)
[2026-01-23 14:44:35] 2026-01-23 19:43:47,242 | INFO     | left removable region: 20
[2026-01-23 14:44:35] 2026-01-23 19:43:47,243 | INFO     | sum of square deviations: 906703512.0
[2026-01-23 14:44:35] 2026-01-23 19:43:47,244 | INFO     | sum of deviations: 3011118783.0000005
[2026-01-23 14:44:35] 2026-01-23 19:43:47,244 | INFO     | mean x: 1769192404.0
[2026-01-23 14:44:35] 2026-01-23 19:43:47,244 | INFO     | mean y: 2503107.7412587414
[2026-01-23 14:44:35] 2026-01-23 19:43:47,245 | INFO     | intersect: -5872899830.397272
[2026-01-23 14:44:35] 2026-01-23 19:43:47,245 | INFO     | chi2: 0.0031702582559819635
[2026-01-23 14:44:35] 2026-01-23 19:43:47,245 | INFO     | current memory leak: 3.32 B/s (using 143 data points, chi2=0.00)
[2026-01-23 14:44:35] 2026-01-23 19:43:47,246 | INFO     | could have reported an average CPU frequency of 2505 MHz (9 samples)
[2026-01-23 14:44:35] 2026-01-23 19:43:47,246 | INFO     | ..............................
[2026-01-23 14:44:35] 2026-01-23 19:43:47,246 | INFO     | . Timing measurements:
[2026-01-23 14:44:35] 2026-01-23 19:43:47,246 | INFO     | . get job = 0 s
[2026-01-23 14:44:35] 2026-01-23 19:43:47,247 | INFO     | . initial setup = 5 s
[2026-01-23 14:44:35] 2026-01-23 19:43:47,247 | INFO     | . payload setup = 4 s
[2026-01-23 14:44:35] 2026-01-23 19:43:47,247 | INFO     | . stage-in = 0 s
[2026-01-23 14:44:35] 2026-01-23 19:43:47,247 | INFO     | . payload execution = 10573 s
[2026-01-23 14:44:35] 2026-01-23 19:43:47,247 | INFO     | . stage-out = 1 s
[2026-01-23 14:44:35] 2026-01-23 19:43:47,247 | INFO     | . log creation = 0 s
[2026-01-23 14:44:35] 2026-01-23 19:43:47,248 | INFO     | ..............................
[2026-01-23 14:44:35] 2026-01-23 19:43:47,369 | INFO     | 
[2026-01-23 14:44:35] 2026-01-23 19:43:47,369 | INFO     | job summary report
[2026-01-23 14:44:35] 2026-01-23 19:43:47,369 | INFO     | --------------------------------------------------
[2026-01-23 14:44:35] 2026-01-23 19:43:47,370 | INFO     | PanDA job id: 6978138077
[2026-01-23 14:44:35] 2026-01-23 19:43:47,370 | INFO     | task id: 48310783
[2026-01-23 14:44:35] 2026-01-23 19:43:47,370 | INFO     | errors: (none)
[2026-01-23 14:44:35] 2026-01-23 19:43:47,370 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-23 14:44:35] 2026-01-23 19:43:47,370 | INFO     | pilot state: finished 
[2026-01-23 14:44:35] 2026-01-23 19:43:47,370 | INFO     | transexitcode: 0
[2026-01-23 14:44:35] 2026-01-23 19:43:47,371 | INFO     | exeerrorcode: 0
[2026-01-23 14:44:35] 2026-01-23 19:43:47,371 | INFO     | exeerrordiag: 
[2026-01-23 14:44:35] 2026-01-23 19:43:47,371 | INFO     | exitcode: 0
[2026-01-23 14:44:35] 2026-01-23 19:43:47,371 | INFO     | exitmsg: OK
[2026-01-23 14:44:35] 2026-01-23 19:43:47,371 | INFO     | cpuconsumptiontime: 80958 s
[2026-01-23 14:44:35] 2026-01-23 19:43:47,371 | INFO     | nevents: 400
[2026-01-23 14:44:35] 2026-01-23 19:43:47,372 | INFO     | neventsw: 0
[2026-01-23 14:44:35] 2026-01-23 19:43:47,372 | INFO     | pid: 22313
[2026-01-23 14:44:35] 2026-01-23 19:43:47,372 | INFO     | pgrp: 22313
[2026-01-23 14:44:35] 2026-01-23 19:43:47,372 | INFO     | corecount: 8
[2026-01-23 14:44:35] 2026-01-23 19:43:47,372 | INFO     | event service: False
[2026-01-23 14:44:35] 2026-01-23 19:43:47,372 | INFO     | sizes: {0: 2284230, 11: 2284230, 10582: 2313260, 10583: 2322516}
[2026-01-23 14:44:35] 2026-01-23 19:43:47,373 | INFO     | --------------------------------------------------
[2026-01-23 14:44:35] 2026-01-23 19:43:47,373 | INFO     | 
[2026-01-23 14:44:35] 2026-01-23 19:43:47,373 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-01-23 14:44:35] 2026-01-23 19:43:47,399 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-23 14:44:35] 2026-01-23 19:43:47,400 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-23 14:44:35] 2026-01-23 19:43:47,404 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-23 14:44:35] 2026-01-23 19:43:47,404 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-23 14:44:35] 2026-01-23 19:43:47,404 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-23 14:44:35] 2026-01-23 19:43:47,405 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-23 14:44:35] 2026-01-23 19:43:47,405 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-23 14:44:35] 2026-01-23 19:43:47,405 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-23 14:44:35] 2026-01-23 19:43:47,405 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-23 14:44:35] 2026-01-23 19:43:47,405 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-23 14:44:35] 2026-01-23 19:43:47,405 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-23 14:44:35] 2026-01-23 19:43:47,406 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-23 14:44:35] 2026-01-23 19:43:47,406 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-23 14:44:35] 2026-01-23 19:43:47,406 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-23 14:44:35] 2026-01-23 19:43:47,406 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-23 14:44:35] 2026-01-23 19:43:47,406 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-23 14:44:35] 2026-01-23 19:43:47,406 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-23 14:44:35] 2026-01-23 19:43:47,407 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-23 14:44:35] 2026-01-23 19:43:47,407 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-23 14:44:35] 2026-01-23 19:43:47,407 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-23 14:44:35] 2026-01-23 19:43:47,407 | INFO     | job 6978138077 has completed (purged errors)
[2026-01-23 14:44:35] 2026-01-23 19:43:47,407 | INFO     | overall cleanup function is called
[2026-01-23 14:44:35] 2026-01-23 19:43:48,419 | INFO     | --- collectZombieJob: --- 10, [22313]
[2026-01-23 14:44:35] 2026-01-23 19:43:48,419 | INFO     | zombie collector waiting for pid 22313
[2026-01-23 14:44:35] 2026-01-23 19:43:48,420 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-23 14:44:35] 2026-01-23 19:43:48,420 | INFO     | collected zombie processes
[2026-01-23 14:44:35] 2026-01-23 19:43:48,420 | INFO     | will attempt to kill all subprocesses of pid=22313
[2026-01-23 14:44:35] 2026-01-23 19:43:48,563 | INFO     | process IDs to be killed: [22313] (in reverse order)
[2026-01-23 14:44:35] 2026-01-23 19:43:48,613 | WARNING  | found no corresponding commands to process id(s)
[2026-01-23 14:44:35] 2026-01-23 19:43:48,614 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-23 14:44:35] 2026-01-23 19:43:48,618 | INFO     | did not find any defunct processes belonging to 22313
[2026-01-23 14:44:35] 2026-01-23 19:43:48,623 | INFO     | did not find any defunct processes belonging to 22313
[2026-01-23 14:44:35] 2026-01-23 19:43:48,623 | INFO     | ready for new job
[2026-01-23 14:44:35] 2026-01-23 19:43:48,624 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-23 14:44:35] 2026-01-23 19:43:48,625 | INFO     | **************************************
[2026-01-23 14:44:35] 2026-01-23 19:43:48,626 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-23 14:44:35] 2026-01-23 19:43:48,626 | INFO     | **************************************
[2026-01-23 14:44:35] 2026-01-23 19:43:48,626 | INFO     | 
[2026-01-23 14:44:35] 2026-01-23 19:43:48,627 | INFO     | architecture information:
[2026-01-23 14:44:35] 2026-01-23 19:43:48,628 | INFO     | executing command: cat /etc/os-release
[2026-01-23 14:44:35] 2026-01-23 19:43:48,640 | INFO     | cat /etc/os-release:
[2026-01-23 14:44:35] NAME="CentOS Linux"
[2026-01-23 14:44:35] VERSION="7 (Core)"
[2026-01-23 14:44:35] ID="centos"
[2026-01-23 14:44:35] ID_LIKE="rhel fedora"
[2026-01-23 14:44:35] VERSION_ID="7"
[2026-01-23 14:44:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-23 14:44:35] ANSI_COLOR="0;31"
[2026-01-23 14:44:35] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-23 14:44:35] HOME_URL="https://www.centos.org/"
[2026-01-23 14:44:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-23 14:44:35] 
[2026-01-23 14:44:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-23 14:44:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-23 14:44:35] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-23 14:44:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-23 14:44:35] 
[2026-01-23 14:44:35] 2026-01-23 19:43:48,640 | INFO     | **************************************
[2026-01-23 14:44:35] 2026-01-23 19:43:49,143 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-01-23 14:44:35] 2026-01-23 19:43:49,158 | INFO     | sufficient remaining disk space (26787971072 B)
[2026-01-23 14:44:35] 2026-01-23 19:43:49,159 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-23 14:44:35] 2026-01-23 19:43:49,159 | INFO     | current server update state: UPDATING_FINAL
[2026-01-23 14:44:35] 2026-01-23 19:43:49,159 | INFO     | update_server=False
[2026-01-23 14:44:35] 2026-01-23 19:43:49,159 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-23 14:44:35] 2026-01-23 19:43:49,160 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-23 14:44:35] 2026-01-23 19:43:49,160 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-23 14:44:35] 2026-01-23 19:43:49,388 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-23 14:44:35] 2026-01-23 19:43:49,388 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-23 14:44:35] 2026-01-23 19:43:49,389 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-23 14:44:35] 2026-01-23 19:43:49,389 | INFO     | will abort loop
[2026-01-23 14:44:35] 2026-01-23 19:43:49,653 | INFO     | all payload control threads have been joined
[2026-01-23 14:44:35] 2026-01-23 19:43:49,662 | INFO     | all job control threads have been joined
[2026-01-23 14:44:35] 2026-01-23 19:43:49,941 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-23 14:44:35] 2026-01-23 19:43:50,036 | INFO     | all data control threads have been joined
[2026-01-23 14:44:35] 2026-01-23 19:43:50,164 | INFO     | [job] retrieve thread has finished
[2026-01-23 14:44:35] 2026-01-23 19:43:50,165 | INFO     | [job] queue monitor thread has finished
[2026-01-23 14:44:35] 2026-01-23 19:43:50,318 | INFO     | [payload] failed_post thread has finished
[2026-01-23 14:44:35] 2026-01-23 19:43:50,394 | INFO     | [job] job monitor thread has finished
[2026-01-23 14:44:35] 2026-01-23 19:43:50,658 | INFO     | [payload] control thread has finished
[2026-01-23 14:44:35] 2026-01-23 19:43:50,667 | INFO     | [job] control thread has finished
[2026-01-23 14:44:35] 2026-01-23 19:43:50,813 | INFO     | [job] create_data_payload thread has finished
[2026-01-23 14:44:35] 2026-01-23 19:43:50,828 | INFO     | [job] validate thread has finished
[2026-01-23 14:44:35] 2026-01-23 19:43:50,837 | INFO     | [data] copytool_in thread has finished
[2026-01-23 14:44:35] 2026-01-23 19:43:50,838 | INFO     | [payload] validate_pre thread has finished
[2026-01-23 14:44:35] 2026-01-23 19:43:51,041 | INFO     | [data] control thread has finished
[2026-01-23 14:44:35] 2026-01-23 19:43:51,100 | INFO     | job.realtimelogging is not enabled
[2026-01-23 14:44:35] 2026-01-23 19:43:51,198 | INFO     | [payload] execute_payloads thread has finished
[2026-01-23 14:44:35] 2026-01-23 19:43:51,690 | INFO     | [payload] validate_post thread has finished
[2026-01-23 14:44:35] 2026-01-23 19:43:51,946 | INFO     | [data] copytool_out thread has finished
[2026-01-23 14:44:35] 2026-01-23 19:43:52,105 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-23 14:44:35] 2026-01-23 19:43:53,165 | INFO     | [data] queue_monitor thread has finished
[2026-01-23 14:44:35] 2026-01-23 19:44:19,081 | INFO     | PID=17923 has CPU usage=4.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-23 14:44:35] 2026-01-23 19:44:19,082 | INFO     | .. there are 3 such processes running
[2026-01-23 14:44:35] 2026-01-23 19:44:19,082 | INFO     | found 0 job(s) in 20 queues
[2026-01-23 14:44:35] 2026-01-23 19:44:19,082 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-23 14:44:35] 2026-01-23 19:44:19,082 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-23 14:44:35] 2026-01-23 19:44:29,314 | INFO     | [monitor] cgroup control has ended
[2026-01-23 14:44:35] 2026-01-23 19:44:30,319 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140417529071424)>', '<ExcThread(monitor, started 140416942847744)>']
[2026-01-23 14:44:35] 2026-01-23 19:44:31,144 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-23 14:44:35] 2026-01-23 19:44:31,144 | INFO     | [monitor] control thread has ended
[2026-01-23 14:44:35] 2026-01-23 19:44:35,325 | INFO     | all workflow threads have been joined
[2026-01-23 14:44:35] 2026-01-23 19:44:35,325 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-23 14:44:35] 2026-01-23 19:44:35,326 | INFO     | traces error code: 0
[2026-01-23 14:44:35] 2026-01-23 19:44:35,326 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-23 14:44:35] 2026-01-23 19:44:35,442 [wrapper] ==== pilot stdout END ====
[2026-01-23 14:44:35] 2026-01-23 19:44:35,444 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-23 14:44:35] 2026-01-23 19:44:35,447 [wrapper] pilotpid: 17923
[2026-01-23 14:44:35] 2026-01-23 19:44:35,449 [wrapper] Pilot exit status: 0
[2026-01-23 14:44:35] 2026-01-23 19:44:35,457 [wrapper] pandaids: 6978138077
[2026-01-23 14:44:35] 2026-01-23 19:44:35,491 [wrapper] cleanup supervisor_pilot 25976 17924
[2026-01-23 14:44:35] 2026-01-23 19:44:35,493 [wrapper] Test setup, not cleaning
[2026-01-23 14:44:35] 2026-01-23 19:44:35,495 [wrapper] apfmon messages muted
[2026-01-23 14:44:35] 2026-01-23 19:44:35,498 [wrapper] ==== wrapper stdout END ====
[2026-01-23 14:44:35] 2026-01-23 19:44:35,500 [wrapper] ==== wrapper stderr END ====
[2026-01-23 14:44:35]  *** Error codes and diagnostics ***
[2026-01-23 14:44:35]     "exeErrorCode": 0,
[2026-01-23 14:44:35]     "exeErrorDiag": "",
[2026-01-23 14:44:35]     "pilotErrorCode": 0,
[2026-01-23 14:44:35]     "pilotErrorDiag": "",
[2026-01-23 14:44:35]  *** Listing of results directory ***
[2026-01-23 14:44:35] total 721484
[2026-01-23 14:44:35] -rw-r--r-- 1 boincer umatlas    584422 Jan 22 22:26 pilot3.tar.gz
[2026-01-23 14:44:35] -rwx------ 1 boincer umatlas     36322 Jan 22 22:28 runpilot2-wrapper.sh
[2026-01-23 14:44:35] -rw-r--r-- 1 boincer umatlas      5111 Jan 22 22:30 queuedata.json
[2026-01-23 14:44:35] -rw-r--r-- 1 boincer umatlas       100 Jan 23 11:46 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-23 14:44:35] -rwxr-xr-x 1 boincer umatlas      7986 Jan 23 11:46 run_atlas
[2026-01-23 14:44:35] -rw-r--r-- 1 boincer umatlas       105 Jan 23 11:46 job.xml
[2026-01-23 14:44:35] -rw-r--r-- 2 boincer umatlas 531294781 Jan 23 11:46 EVNT.48310779._000007.pool.root.1
[2026-01-23 14:44:35] -rw-r--r-- 2 boincer umatlas     15845 Jan 23 11:46 start_atlas.sh
[2026-01-23 14:44:35] drwxrwx--x 2 boincer umatlas      4096 Jan 23 11:46 shared
[2026-01-23 14:44:35] -rw-r--r-- 2 boincer umatlas    597749 Jan 23 11:46 input.tar.gz
[2026-01-23 14:44:35] -rw-r--r-- 1 boincer umatlas         0 Jan 23 11:46 boinc_lockfile
[2026-01-23 14:44:35] -rw-r--r-- 1 boincer umatlas      2523 Jan 23 11:46 pandaJob.out
[2026-01-23 14:44:35] -rw------- 1 boincer umatlas        57 Jan 23 11:46 setup.sh.local
[2026-01-23 14:44:35] -rw------- 1 boincer umatlas   1004246 Jan 23 11:47 agis_schedconf.cvmfs.json
[2026-01-23 14:44:35] -rw------- 1 boincer umatlas   1516246 Jan 23 11:47 agis_ddmendpoints.agis.ALL.json
[2026-01-23 14:44:35] -rw------- 1 boincer umatlas       444 Jan 23 11:47 workernode_map.json
[2026-01-23 14:44:35] drwx------ 5 boincer umatlas      4096 Jan 23 11:47 pilot3
[2026-01-23 14:44:35] -rw-r--r-- 1 boincer umatlas      5951 Jan 23 14:37 init_data.xml
[2026-01-23 14:44:35] -rw------- 1 boincer umatlas 199730056 Jan 23 14:43 HITS.48310783._000315.pool.root.1
[2026-01-23 14:44:35] -rw-r--r-- 1 boincer umatlas       531 Jan 23 14:43 boinc_task_state.xml
[2026-01-23 14:44:35] -rw------- 1 boincer umatlas      1055 Jan 23 14:43 memory_monitor_summary.json
[2026-01-23 14:44:35] -rw------- 1 boincer umatlas        95 Jan 23 14:43 pilot_heartbeat.json
[2026-01-23 14:44:35] -rw------- 1 boincer umatlas    412901 Jan 23 14:43 log.48310783._000315.job.log.tgz.1
[2026-01-23 14:44:35] -rw------- 1 boincer umatlas      6417 Jan 23 14:43 heartbeat.json
[2026-01-23 14:44:35] -rw-r--r-- 1 boincer umatlas      8192 Jan 23 14:44 boinc_mmap_file
[2026-01-23 14:44:35] -rw-r--r-- 1 boincer umatlas        28 Jan 23 14:44 wrapper_checkpoint.txt
[2026-01-23 14:44:35] -rw------- 1 boincer umatlas      5075 Jan 23 14:44 pilotlog.txt
[2026-01-23 14:44:35] -rw------- 1 boincer umatlas   1500984 Jan 23 14:44 log.48310783._000315.job.log.1
[2026-01-23 14:44:35] -rw------- 1 boincer umatlas       357 Jan 23 14:44 output.list
[2026-01-23 14:44:35] -rw-r--r-- 1 boincer umatlas       620 Jan 23 14:44 runtime_log
[2026-01-23 14:44:35] -rw------- 1 boincer umatlas   1935360 Jan 23 14:44 result.tar.gz
[2026-01-23 14:44:35] -rw-r--r-- 1 boincer umatlas      9337 Jan 23 14:44 runtime_log.err
[2026-01-23 14:44:35] -rw------- 1 boincer umatlas       660 Jan 23 14:44 ONINDmV1M38n9Rq4apOajLDm4fhM0noT9bVo0NGKDmLGvKDmCNSUHo.diag
[2026-01-23 14:44:35] -rw-r--r-- 1 boincer umatlas     20961 Jan 23 14:44 stderr.txt
[2026-01-23 14:44:35] HITS file was successfully produced:
[2026-01-23 14:44:35] -rw------- 1 boincer umatlas 199730056 Jan 23 14:43 shared/HITS.pool.root.1
[2026-01-23 14:44:35]  *** Contents of shared directory: ***
[2026-01-23 14:44:35] total 716392
[2026-01-23 14:44:35] -rw-r--r-- 2 boincer umatlas 531294781 Jan 23 11:46 ATLAS.root_0
[2026-01-23 14:44:35] -rw-r--r-- 2 boincer umatlas     15845 Jan 23 11:46 start_atlas.sh
[2026-01-23 14:44:35] -rw-r--r-- 2 boincer umatlas    597749 Jan 23 11:46 input.tar.gz
[2026-01-23 14:44:35] -rw------- 1 boincer umatlas 199730056 Jan 23 14:43 HITS.pool.root.1
[2026-01-23 14:44:35] -rw------- 1 boincer umatlas   1935360 Jan 23 14:44 result.tar.gz
14:44:37 (13892): run_atlas exited; CPU time 81123.781910
14:44:37 (13892): called boinc_finish(0)

</stderr_txt>
]]>

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