Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
02:10:50 (860392): wrapper (7.7.26015): starting
02:10:50 (860392): wrapper: running run_atlas (--nthreads 4)
[2026-01-24 02:10:50] Arguments: --nthreads 4
[2026-01-24 02:10:50] Threads: 4
[2026-01-24 02:10:50] Checking for CVMFS
[2026-01-24 02:10:50] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-24 02:10:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-24 02:10:50] Running cvmfs_config stat atlas.cern.ch
[2026-01-24 02:10:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-24 02:10:51] 2.9.2.0 41542 4895 105980 155454 1 50 22118390 36864000 0 130560 0 2327852 99.988 135970 10911 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-01-24 02:10:51] CVMFS is ok
[2026-01-24 02:10:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-24 02:10:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-24 02:10:51] Further information can be found at the LHC@home message board.
[2026-01-24 02:10:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-24 02:10:51] Checking for apptainer binary...
[2026-01-24 02:10:51] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-24 02:10:51] Running /usr/bin/apptainer --version
[2026-01-24 02:10:51] apptainer version 1.4.1-1.1
[2026-01-24 02:10:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-24 02:10:51] thA332a
[2026-01-24 02:10:51] apptainer works
[2026-01-24 02:10:51] Set ATHENA_PROC_NUMBER=4
[2026-01-24 02:10:51] Set ATHENA_CORE_NUMBER=4
[2026-01-24 02:10:51] Starting ATLAS job with PandaID=6978170951
[2026-01-24 02:10:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-24 03:15:28]  *** The last 200 lines of the pilot log: ***
[2026-01-24 03:15:28] 2026-01-24 02:14:56,739 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-24 03:15:28] 2026-01-24 02:14:56,739 | INFO     | collected zombie processes
[2026-01-24 03:15:28] 2026-01-24 02:14:56,739 | INFO     | will attempt to kill all subprocesses of pid=869007
[2026-01-24 03:15:28] 2026-01-24 02:14:56,783 | INFO     | process IDs to be killed: [869007] (in reverse order)
[2026-01-24 03:15:28] 2026-01-24 02:14:56,817 | WARNING  | found no corresponding commands to process id(s)
[2026-01-24 03:15:28] 2026-01-24 02:14:56,817 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-24 03:15:28] 2026-01-24 02:14:56,819 | INFO     | did not find any defunct processes belonging to 869007
[2026-01-24 03:15:28] 2026-01-24 02:14:56,820 | INFO     | did not find any defunct processes belonging to 869007
[2026-01-24 03:15:28] 2026-01-24 02:14:56,820 | INFO     | ready for new job
[2026-01-24 03:15:28] 2026-01-24 02:14:56,820 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-24 03:15:28] 2026-01-24 02:14:56,821 | INFO     | **************************************
[2026-01-24 03:15:28] 2026-01-24 02:14:56,821 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-24 03:15:28] 2026-01-24 02:14:56,821 | INFO     | **************************************
[2026-01-24 03:15:28] 2026-01-24 02:14:56,821 | INFO     | 
[2026-01-24 03:15:28] 2026-01-24 02:14:56,822 | INFO     | architecture information:
[2026-01-24 03:15:28] 2026-01-24 02:14:56,822 | INFO     | executing command: cat /etc/os-release
[2026-01-24 03:15:28] 2026-01-24 02:14:56,836 | INFO     | cat /etc/os-release:
[2026-01-24 03:15:28] NAME="CentOS Linux"
[2026-01-24 03:15:28] VERSION="7 (Core)"
[2026-01-24 03:15:28] ID="centos"
[2026-01-24 03:15:28] ID_LIKE="rhel fedora"
[2026-01-24 03:15:28] VERSION_ID="7"
[2026-01-24 03:15:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-24 03:15:28] ANSI_COLOR="0;31"
[2026-01-24 03:15:28] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-24 03:15:28] HOME_URL="https://www.centos.org/"
[2026-01-24 03:15:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-24 03:15:28] 
[2026-01-24 03:15:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-24 03:15:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-24 03:15:28] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-24 03:15:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-24 03:15:28] 
[2026-01-24 03:15:28] 2026-01-24 02:14:56,836 | INFO     | **************************************
[2026-01-24 03:15:28] 2026-01-24 02:14:57,339 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-01-24 03:15:28] 2026-01-24 02:14:57,357 | INFO     | sufficient remaining disk space (335071412224 B)
[2026-01-24 03:15:28] 2026-01-24 02:14:57,357 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-24 03:15:28] 2026-01-24 02:14:57,357 | INFO     | current server update state: UPDATING_FINAL
[2026-01-24 03:15:28] 2026-01-24 02:14:57,357 | INFO     | update_server=False
[2026-01-24 03:15:28] 2026-01-24 02:14:57,358 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-24 03:15:28] 2026-01-24 02:14:57,452 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-24 03:15:28] 2026-01-24 02:14:57,759 | INFO     | all data control threads have been joined
[2026-01-24 03:15:28] 2026-01-24 02:14:57,786 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-24 03:15:28] 2026-01-24 02:14:57,786 | INFO     | aborting loop
[2026-01-24 03:15:28] 2026-01-24 02:14:57,962 | INFO     | all payload control threads have been joined
[2026-01-24 03:15:28] 2026-01-24 02:14:58,058 | INFO     | all job control threads have been joined
[2026-01-24 03:15:28] 2026-01-24 02:14:58,363 | INFO     | [job] retrieve thread has finished
[2026-01-24 03:15:28] 2026-01-24 02:14:58,405 | INFO     | [job] create_data_payload thread has finished
[2026-01-24 03:15:28] 2026-01-24 02:14:58,623 | INFO     | [data] copytool_in thread has finished
[2026-01-24 03:15:28] 2026-01-24 02:14:58,765 | INFO     | [data] control thread has finished
[2026-01-24 03:15:28] 2026-01-24 02:14:58,792 | INFO     | [job] job monitor thread has finished
[2026-01-24 03:15:28] 2026-01-24 02:14:58,968 | INFO     | [payload] control thread has finished
[2026-01-24 03:15:28] 2026-01-24 02:14:59,064 | INFO     | [job] control thread has finished
[2026-01-24 03:15:28] 2026-01-24 02:14:59,070 | INFO     | [payload] execute_payloads thread has finished
[2026-01-24 03:15:28] 2026-01-24 02:14:59,257 | INFO     | [payload] failed_post thread has finished
[2026-01-24 03:15:28] 2026-01-24 02:14:59,421 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-24 03:15:28] 2026-01-24 02:14:59,458 | INFO     | [data] copytool_out thread has finished
[2026-01-24 03:15:28] 2026-01-24 02:14:59,687 | INFO     | [payload] validate_post thread has finished
[2026-01-24 03:15:28] 2026-01-24 02:14:59,786 | INFO     | [job] validate thread has finished
[2026-01-24 03:15:28] 2026-01-24 02:14:59,832 | INFO     | [payload] validate_pre thread has finished
[2026-01-24 03:15:28] 2026-01-24 02:15:00,324 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-24 03:15:28] 2026-01-24 02:15:01,330 | INFO     | [job] queue monitor thread has finished
[2026-01-24 03:15:28] 2026-01-24 02:15:03,428 | INFO     | [data] queue_monitor thread has finished
[2026-01-24 03:15:28] 2026-01-24 02:15:07,475 | INFO     | job.realtimelogging is not enabled
[2026-01-24 03:15:28] 2026-01-24 02:15:08,001 | INFO     | [monitor] cgroup control has ended
[2026-01-24 03:15:28] 2026-01-24 02:15:08,481 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-24 03:15:28] 2026-01-24 02:15:09,885 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140666148685632)>', '<ExcThread(monitor, started 140665061103360)>']
[2026-01-24 03:15:28] 2026-01-24 02:15:14,911 | INFO     | all workflow threads have been joined
[2026-01-24 03:15:28] 2026-01-24 02:15:14,911 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-24 03:15:28] 2026-01-24 02:15:14,911 | INFO     | traces error code: 0
[2026-01-24 03:15:28] 2026-01-24 02:15:14,911 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-24 03:15:28] 2026-01-24 02:15:27,935 | INFO     | PID=864499 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-24 03:15:28] 2026-01-24 02:15:27,936 | INFO     | found 0 job(s) in 20 queues
[2026-01-24 03:15:28] 2026-01-24 02:15:27,936 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-24 03:15:28] 2026-01-24 02:15:27,936 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-24 03:15:28] 2026-01-24 02:15:27,936 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-24 03:15:28] 2026-01-24 02:15:27,936 | INFO     | [monitor] control thread has ended
[2026-01-24 03:15:28] 2026-01-24 02:15:28,013 [wrapper] ==== pilot stdout END ====
[2026-01-24 03:15:28] 2026-01-24 02:15:28,018 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-24 03:15:28] 2026-01-24 02:15:28,022 [wrapper] pilotpid: 864499
[2026-01-24 03:15:28] 2026-01-24 02:15:28,025 [wrapper] Pilot exit status: 0
[2026-01-24 03:15:28] 2026-01-24 02:15:28,037 [wrapper] pandaids: 6978170951
[2026-01-24 03:15:28] 2026-01-24 02:15:28,060 [wrapper] cleanup supervisor_pilot  874045 864500
[2026-01-24 03:15:28] 2026-01-24 02:15:28,064 [wrapper] Test setup, not cleaning
[2026-01-24 03:15:28] 2026-01-24 02:15:28,068 [wrapper] apfmon messages muted
[2026-01-24 03:15:28] 2026-01-24 02:15:28,072 [wrapper] ==== wrapper stdout END ====
[2026-01-24 03:15:28] 2026-01-24 02:15:28,076 [wrapper] ==== wrapper stderr END ====
[2026-01-24 03:15:28]  *** Error codes and diagnostics ***
[2026-01-24 03:15:28]     "exeErrorCode": 0,
[2026-01-24 03:15:28]     "exeErrorDiag": "",
[2026-01-24 03:15:28]     "pilotErrorCode": 0,
[2026-01-24 03:15:28]     "pilotErrorDiag": "",
[2026-01-24 03:15:28]  *** Listing of results directory ***
[2026-01-24 03:15:28] total 661032
[2026-01-24 03:15:28] -rwx------ 1 boinc boinc     36322 Jan 23 08:45 runpilot2-wrapper.sh
[2026-01-24 03:15:28] -rw-r--r-- 1 boinc boinc    584422 Jan 23 08:46 pilot3.tar.gz
[2026-01-24 03:15:28] -rw-r--r-- 1 boinc boinc      5111 Jan 23 08:47 queuedata.json
[2026-01-24 03:15:28] -rw-r--r-- 1 boinc boinc       100 Jan 24 02:10 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-24 03:15:28] -rwxr-xr-x 1 boinc boinc      7986 Jan 24 02:10 run_atlas
[2026-01-24 03:15:28] -rw-r--r-- 1 boinc boinc       105 Jan 24 02:10 job.xml
[2026-01-24 03:15:28] -rw-r--r-- 2 boinc boinc 496160675 Jan 24 02:10 EVNT.48310665._000102.pool.root.1
[2026-01-24 03:15:28] -rw-r--r-- 2 boinc boinc    597761 Jan 24 02:10 input.tar.gz
[2026-01-24 03:15:28] -rw-r--r-- 2 boinc boinc     15845 Jan 24 02:10 start_atlas.sh
[2026-01-24 03:15:28] drwxrwx--x 2 boinc boinc      4096 Jan 24 02:10 shared
[2026-01-24 03:15:28] -rw-r--r-- 1 boinc boinc         0 Jan 24 02:10 boinc_setup_complete
[2026-01-24 03:15:28] -rw-r--r-- 1 boinc boinc      6370 Jan 24 02:10 init_data.xml
[2026-01-24 03:15:28] -rw-r--r-- 1 boinc boinc         0 Jan 24 02:10 boinc_lockfile
[2026-01-24 03:15:28] -rw-r--r-- 1 boinc boinc      2523 Jan 24 02:10 pandaJob.out
[2026-01-24 03:15:28] -rw------- 1 boinc boinc   1004238 Jan 24 02:10 agis_schedconf.cvmfs.json
[2026-01-24 03:15:28] -rw------- 1 boinc boinc   1516246 Jan 24 02:10 agis_ddmendpoints.agis.ALL.json
[2026-01-24 03:15:28] -rw------- 1 boinc boinc       417 Jan 24 02:11 workernode_map.json
[2026-01-24 03:15:28] drwx------ 5 boinc boinc      4096 Jan 24 02:11 pilot3
[2026-01-24 03:15:28] -rw------- 1 boinc boinc 175150317 Jan 24 03:14 HITS.48310670._005063.pool.root.1
[2026-01-24 03:15:28] -rw-r--r-- 1 boinc boinc       531 Jan 24 03:14 boinc_task_state.xml
[2026-01-24 03:15:28] -rw------- 1 boinc boinc      1019 Jan 24 03:14 memory_monitor_summary.json
[2026-01-24 03:15:28] -rw------- 1 boinc boinc    253631 Jan 24 03:14 log.48310670._005063.job.log.tgz.1
[2026-01-24 03:15:28] -rw------- 1 boinc boinc      6298 Jan 24 03:14 heartbeat.json
[2026-01-24 03:15:28] -rw-r--r-- 1 boinc boinc        27 Jan 24 03:15 wrapper_checkpoint.txt
[2026-01-24 03:15:28] -rw-r--r-- 1 boinc boinc      8192 Jan 24 03:15 boinc_mmap_file
[2026-01-24 03:15:28] -rw------- 1 boinc boinc       746 Jan 24 03:15 pilotlog.txt
[2026-01-24 03:15:28] -rw------- 1 boinc boinc        95 Jan 24 03:15 pilot_heartbeat.json
[2026-01-24 03:15:28] -rw------- 1 boinc boinc    573476 Jan 24 03:15 log.48310670._005063.job.log.1
[2026-01-24 03:15:28] -rw------- 1 boinc boinc       357 Jan 24 03:15 output.list
[2026-01-24 03:15:28] -rw-r--r-- 1 boinc boinc       620 Jan 24 03:15 runtime_log
[2026-01-24 03:15:28] -rw------- 1 boinc boinc    849920 Jan 24 03:15 result.tar.gz
[2026-01-24 03:15:28] -rw-r--r-- 1 boinc boinc      8901 Jan 24 03:15 runtime_log.err
[2026-01-24 03:15:28] -rw------- 1 boinc boinc       658 Jan 24 03:15 5x7KDmG2Q38n9Rq4apOajLDm4fhM0noT9bVo0NGKDmVbvKDmiDorfm.diag
[2026-01-24 03:15:28] -rw-r--r-- 1 boinc boinc     10498 Jan 24 03:15 stderr.txt
[2026-01-24 03:15:28] HITS file was successfully produced:
[2026-01-24 03:15:28] -rw------- 1 boinc boinc 175150317 Jan 24 03:14 shared/HITS.pool.root.1
[2026-01-24 03:15:28]  *** Contents of shared directory: ***
[2026-01-24 03:15:28] total 657020
[2026-01-24 03:15:28] -rw-r--r-- 2 boinc boinc 496160675 Jan 24 02:10 ATLAS.root_0
[2026-01-24 03:15:28] -rw-r--r-- 2 boinc boinc    597761 Jan 24 02:10 input.tar.gz
[2026-01-24 03:15:28] -rw-r--r-- 2 boinc boinc     15845 Jan 24 02:10 start_atlas.sh
[2026-01-24 03:15:28] -rw------- 1 boinc boinc 175150317 Jan 24 03:14 HITS.pool.root.1
[2026-01-24 03:15:28] -rw------- 1 boinc boinc    849920 Jan 24 03:15 result.tar.gz
03:15:29 (860392): run_atlas exited; CPU time 14192.982238
03:15:29 (860392): called boinc_finish(0)

</stderr_txt>
]]>

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