Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
11:51:30 (5516): wrapper (7.7.26015): starting
11:51:30 (5516): wrapper: running run_atlas (--nthreads 8)
[2026-01-23 11:51:30] Arguments: --nthreads 8
[2026-01-23 11:51:30] Threads: 8
[2026-01-23 11:51:30] Checking for CVMFS
[2026-01-23 11:51:30] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-23 11:51:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-23 11:51:31] Running cvmfs_config stat atlas.cern.ch
[2026-01-23 11:51:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-23 11:51:31] 2.13.3.0 9860 41920 232716 155442 2 168 35686074 39288833 6710 16776704 0 22812126 99.579 29902331 39004 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-23 11:51:31] CVMFS is ok
[2026-01-23 11:51:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-23 11:51:31] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-23 11:51:31] Further information can be found at the LHC@home message board.
[2026-01-23 11:51:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-23 11:51:31] Checking for apptainer binary...
[2026-01-23 11:51:31] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-23 11:51:31] Running /usr/bin/apptainer --version
[2026-01-23 11:51:31] apptainer version 1.4.5-2.el9
[2026-01-23 11:51:31] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-23 11:51:32] c-210-21.aglt2.org
[2026-01-23 11:51:32] apptainer works
[2026-01-23 11:51:32] Set ATHENA_PROC_NUMBER=8
[2026-01-23 11:51:32] Set ATHENA_CORE_NUMBER=8
[2026-01-23 11:51:32] Starting ATLAS job with PandaID=6969846262
[2026-01-23 11:51:32] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-23 13:28:16]  *** The last 200 lines of the pilot log: ***
[2026-01-23 13:28:16]  scope=mc23_13p6TeV
[2026-01-23 13:28:16]  status=None
[2026-01-23 13:28:16]  status_code=0
[2026-01-23 13:28:16]  storage_token=
[2026-01-23 13:28:16]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6969846262/log.48215263._038928.job.log.tgz.1
[2026-01-23 13:28:16]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f6/d1/log.48215263._038928.job.log.tgz.1
[2026-01-23 13:28:16]  workdir=None
[2026-01-23 13:28:16] ]
[2026-01-23 13:28:16] 2026-01-23 18:27:34,193 | INFO     | transferring file log.48215263._038928.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6969846262/log.48215263._038928.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-01-23 13:28:16] 2026-01-23 18:27:34,193 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6969846262/log.48215263._038928.job.log.tgz.1 /tmp/boinchome/slots/0/log.48215263._038928.job
[2026-01-23 13:28:16] 2026-01-23 18:27:34,211 | INFO     | adding to output.list: log.48215263._038928.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f6/d1/log.48215263._038928.job.log.tg
[2026-01-23 13:28:16] 2026-01-23 18:27:34,212 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-23 13:28:16] 2026-01-23 18:27:34,212 | INFO     | summary of transferred files:
[2026-01-23 13:28:16] 2026-01-23 18:27:34,212 | INFO     |  -- lfn=log.48215263._038928.job.log.tgz.1, status_code=0, status=transferred
[2026-01-23 13:28:16] 2026-01-23 18:27:34,213 | INFO     | stage-out finished correctly
[2026-01-23 13:28:16] 2026-01-23 18:27:34,879 | INFO     | time since job start (5738s) is within the limit (349056.0s)
[2026-01-23 13:28:16] 2026-01-23 18:27:36,015 | INFO     | monitor loop #405: job 0:6969846262 is in state 'finished'
[2026-01-23 13:28:16] 2026-01-23 18:27:36,015 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-23 13:28:16] 2026-01-23 18:27:36,854 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-23 13:28:16] 2026-01-23 18:27:36,890 | INFO     | time since job start (5740s) is within the limit (349056.0s)
[2026-01-23 13:28:16] 2026-01-23 18:27:38,108 | INFO     | job 6969846262 has state=finished
[2026-01-23 13:28:16] 2026-01-23 18:27:38,109 | INFO     | preparing for final server update for job 6969846262 in state='finished'
[2026-01-23 13:28:16] 2026-01-23 18:27:38,110 | INFO     | this job has now completed (state=finished)
[2026-01-23 13:28:16] 2026-01-23 18:27:38,110 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-23 13:28:16] 2026-01-23 18:27:38,110 | INFO     | log transfer has been attempted: DONE
[2026-01-23 13:28:16] 2026-01-23 18:27:38,110 | INFO     | job 6969846262 has finished - writing final server update
[2026-01-23 13:28:16] 2026-01-23 18:27:38,110 | INFO     | total number of processed events: 400 (read)
[2026-01-23 13:28:16] 2026-01-23 18:27:38,111 | INFO     | executing command: lscpu
[2026-01-23 13:28:16] 2026-01-23 18:27:38,155 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-23 13:28:16] 2026-01-23 18:27:38,518 | INFO     | monitor loop #406: job 0:6969846262 is in state 'finished'
[2026-01-23 13:28:16] 2026-01-23 18:27:38,518 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-23 13:28:16] 2026-01-23 18:27:38,906 | INFO     | time since job start (5742s) is within the limit (349056.0s)
[2026-01-23 13:28:16] 2026-01-23 18:27:40,911 | INFO     | time since job start (5744s) is within the limit (349056.0s)
[2026-01-23 13:28:16] 2026-01-23 18:27:41,021 | INFO     | monitor loop #407: job 0:6969846262 is in state 'finished'
[2026-01-23 13:28:16] 2026-01-23 18:27:41,021 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-23 13:28:16] 2026-01-23 18:27:42,531 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-23 13:28:16] 2026-01-23 18:27:42,537 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2619.890574999999
[2026-01-23 13:28:16] 2026-01-23 18:27:42,544 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6969846262/memory_monitor_summary.json (trf name=prmon)
[2026-01-23 13:28:16] 2026-01-23 18:27:42,545 | INFO     | extracted standard info from prmon json
[2026-01-23 13:28:16] 2026-01-23 18:27:42,545 | INFO     | extracted standard memory fields from prmon json
[2026-01-23 13:28:16] 2026-01-23 18:27:42,545 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-23 13:28:16] 2026-01-23 18:27:42,545 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-23 13:28:16] 2026-01-23 18:27:42,545 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-23 13:28:16] 2026-01-23 18:27:42,548 | INFO     | fitting pss+swap vs Time
[2026-01-23 13:28:16] 2026-01-23 18:27:42,548 | INFO     | sum of square deviations: 204140654.43678126
[2026-01-23 13:28:16] 2026-01-23 18:27:42,548 | INFO     | sum of deviations: -4439207069.712644
[2026-01-23 13:28:16] 2026-01-23 18:27:42,549 | INFO     | mean x: 1769190081.0804598
[2026-01-23 13:28:16] 2026-01-23 18:27:42,549 | INFO     | mean y: 2598247.8160919542
[2026-01-23 13:28:16] 2026-01-23 18:27:42,549 | INFO     | intersect: 38475097208.23285
[2026-01-23 13:28:16] 2026-01-23 18:27:42,549 | INFO     | chi2: 0.10876325215237995
[2026-01-23 13:28:16] 2026-01-23 18:27:42,549 | INFO     | current memory leak: -21.75 B/s (using 87 data points, chi2=0.11)
[2026-01-23 13:28:16] 2026-01-23 18:27:42,550 | INFO     | could have reported an average CPU frequency of 2602 MHz (7 samples)
[2026-01-23 13:28:16] 2026-01-23 18:27:42,550 | INFO     | ..............................
[2026-01-23 13:28:16] 2026-01-23 18:27:42,550 | INFO     | . Timing measurements:
[2026-01-23 13:28:16] 2026-01-23 18:27:42,550 | INFO     | . get job = 0 s
[2026-01-23 13:28:16] 2026-01-23 18:27:42,550 | INFO     | . initial setup = 4 s
[2026-01-23 13:28:16] 2026-01-23 18:27:42,550 | INFO     | . payload setup = 8 s
[2026-01-23 13:28:16] 2026-01-23 18:27:42,550 | INFO     | . stage-in = 0 s
[2026-01-23 13:28:16] 2026-01-23 18:27:42,550 | INFO     | . payload execution = 5704 s
[2026-01-23 13:28:16] 2026-01-23 18:27:42,550 | INFO     | . stage-out = 0 s
[2026-01-23 13:28:16] 2026-01-23 18:27:42,550 | INFO     | . log creation = 0 s
[2026-01-23 13:28:16] 2026-01-23 18:27:42,551 | INFO     | ..............................
[2026-01-23 13:28:16] 2026-01-23 18:27:42,918 | INFO     | time since job start (5746s) is within the limit (349056.0s)
[2026-01-23 13:28:16] 2026-01-23 18:27:43,142 | INFO     | 
[2026-01-23 13:28:16] 2026-01-23 18:27:43,143 | INFO     | job summary report
[2026-01-23 13:28:16] 2026-01-23 18:27:43,143 | INFO     | --------------------------------------------------
[2026-01-23 13:28:16] 2026-01-23 18:27:43,143 | INFO     | PanDA job id: 6969846262
[2026-01-23 13:28:16] 2026-01-23 18:27:43,143 | INFO     | task id: 48215263
[2026-01-23 13:28:16] 2026-01-23 18:27:43,143 | INFO     | errors: (none)
[2026-01-23 13:28:16] 2026-01-23 18:27:43,143 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-23 13:28:16] 2026-01-23 18:27:43,144 | INFO     | pilot state: finished 
[2026-01-23 13:28:16] 2026-01-23 18:27:43,144 | INFO     | transexitcode: 0
[2026-01-23 13:28:16] 2026-01-23 18:27:43,144 | INFO     | exeerrorcode: 0
[2026-01-23 13:28:16] 2026-01-23 18:27:43,144 | INFO     | exeerrordiag: 
[2026-01-23 13:28:16] 2026-01-23 18:27:43,144 | INFO     | exitcode: 0
[2026-01-23 13:28:16] 2026-01-23 18:27:43,144 | INFO     | exitmsg: OK
[2026-01-23 13:28:16] 2026-01-23 18:27:43,144 | INFO     | cpuconsumptiontime: 31409 s
[2026-01-23 13:28:16] 2026-01-23 18:27:43,144 | INFO     | nevents: 400
[2026-01-23 13:28:16] 2026-01-23 18:27:43,144 | INFO     | neventsw: 0
[2026-01-23 13:28:16] 2026-01-23 18:27:43,144 | INFO     | pid: 15741
[2026-01-23 13:28:16] 2026-01-23 18:27:43,144 | INFO     | pgrp: 15741
[2026-01-23 13:28:16] 2026-01-23 18:27:43,145 | INFO     | corecount: 8
[2026-01-23 13:28:16] 2026-01-23 18:27:43,145 | INFO     | event service: False
[2026-01-23 13:28:16] 2026-01-23 18:27:43,145 | INFO     | sizes: {0: 2283950, 1: 2283950, 6: 2284240, 12: 2284268, 5716: 2310851, 5717: 2310850, 5718: 2320032, 5720: 2320088, 5726: 2320282}
[2026-01-23 13:28:16] 2026-01-23 18:27:43,145 | INFO     | --------------------------------------------------
[2026-01-23 13:28:16] 2026-01-23 18:27:43,145 | INFO     | 
[2026-01-23 13:28:16] 2026-01-23 18:27:43,145 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-23 13:28:16] 2026-01-23 18:27:43,168 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-23 13:28:16] 2026-01-23 18:27:43,168 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-23 13:28:16] 2026-01-23 18:27:43,168 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-23 13:28:16] 2026-01-23 18:27:43,169 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-23 13:28:16] 2026-01-23 18:27:43,169 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-23 13:28:16] 2026-01-23 18:27:43,169 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-23 13:28:16] 2026-01-23 18:27:43,169 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-23 13:28:16] 2026-01-23 18:27:43,169 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-23 13:28:16] 2026-01-23 18:27:43,169 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-23 13:28:16] 2026-01-23 18:27:43,169 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-23 13:28:16] 2026-01-23 18:27:43,169 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-23 13:28:16] 2026-01-23 18:27:43,169 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-23 13:28:16] 2026-01-23 18:27:43,170 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-23 13:28:16] 2026-01-23 18:27:43,170 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-23 13:28:16] 2026-01-23 18:27:43,170 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-23 13:28:16] 2026-01-23 18:27:43,170 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-23 13:28:16] 2026-01-23 18:27:43,170 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-23 13:28:16] 2026-01-23 18:27:43,170 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-23 13:28:16] 2026-01-23 18:27:43,170 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-23 13:28:16] 2026-01-23 18:27:43,170 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-23 13:28:16] 2026-01-23 18:27:43,171 | INFO     | job 6969846262 has completed (purged errors)
[2026-01-23 13:28:16] 2026-01-23 18:27:43,171 | INFO     | overall cleanup function is called
[2026-01-23 13:28:16] 2026-01-23 18:27:44,179 | INFO     | --- collectZombieJob: --- 10, [15741]
[2026-01-23 13:28:16] 2026-01-23 18:27:44,179 | INFO     | zombie collector waiting for pid 15741
[2026-01-23 13:28:16] 2026-01-23 18:27:44,179 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-23 13:28:16] 2026-01-23 18:27:44,179 | INFO     | collected zombie processes
[2026-01-23 13:28:16] 2026-01-23 18:27:44,179 | INFO     | will attempt to kill all subprocesses of pid=15741
[2026-01-23 13:28:16] 2026-01-23 18:27:44,435 | INFO     | process IDs to be killed: [15741] (in reverse order)
[2026-01-23 13:28:16] 2026-01-23 18:27:44,513 | WARNING  | found no corresponding commands to process id(s)
[2026-01-23 13:28:16] 2026-01-23 18:27:44,513 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-23 13:28:16] 2026-01-23 18:27:44,523 | INFO     | did not find any defunct processes belonging to 15741
[2026-01-23 13:28:16] 2026-01-23 18:27:44,533 | INFO     | did not find any defunct processes belonging to 15741
[2026-01-23 13:28:16] 2026-01-23 18:27:44,533 | INFO     | ready for new job
[2026-01-23 13:28:16] 2026-01-23 18:27:44,534 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-23 13:28:16] 2026-01-23 18:27:44,536 | INFO     | ***************************************
[2026-01-23 13:28:16] 2026-01-23 18:27:44,536 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-23 13:28:16] 2026-01-23 18:27:44,536 | INFO     | ***************************************
[2026-01-23 13:28:16] 2026-01-23 18:27:44,536 | INFO     | 
[2026-01-23 13:28:16] 2026-01-23 18:27:44,538 | INFO     | architecture information:
[2026-01-23 13:28:16] 2026-01-23 18:27:44,539 | INFO     | executing command: cat /etc/os-release
[2026-01-23 13:28:16] 2026-01-23 18:27:44,556 | INFO     | cat /etc/os-release:
[2026-01-23 13:28:16] NAME="CentOS Linux"
[2026-01-23 13:28:16] VERSION="7 (Core)"
[2026-01-23 13:28:16] ID="centos"
[2026-01-23 13:28:16] ID_LIKE="rhel fedora"
[2026-01-23 13:28:16] VERSION_ID="7"
[2026-01-23 13:28:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-23 13:28:16] ANSI_COLOR="0;31"
[2026-01-23 13:28:16] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-23 13:28:16] HOME_URL="https://www.centos.org/"
[2026-01-23 13:28:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-23 13:28:16] 
[2026-01-23 13:28:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-23 13:28:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-23 13:28:16] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-23 13:28:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-23 13:28:16] 
[2026-01-23 13:28:16] 2026-01-23 18:27:44,557 | INFO     | ***************************************
[2026-01-23 13:28:16] 2026-01-23 18:27:45,060 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-23 13:28:16] 2026-01-23 18:27:45,080 | INFO     | sufficient remaining disk space (50403999744 B)
[2026-01-23 13:28:16] 2026-01-23 18:27:45,081 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-23 13:28:16] 2026-01-23 18:27:45,081 | INFO     | current server update state: UPDATING_FINAL
[2026-01-23 13:28:16] 2026-01-23 18:27:45,081 | INFO     | update_server=False
[2026-01-23 13:28:16] 2026-01-23 18:27:45,081 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-23 13:28:16] 2026-01-23 18:27:45,082 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-23 13:28:16] 2026-01-23 18:27:45,082 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-23 13:28:16] 2026-01-23 18:27:45,083 | INFO     | aborting loop
[2026-01-23 13:28:16] 2026-01-23 18:27:45,161 | INFO     | all data control threads have been joined
[2026-01-23 13:28:16] 2026-01-23 18:27:45,363 | INFO     | all payload control threads have been joined
[2026-01-23 13:28:16] 2026-01-23 18:27:46,087 | INFO     | [job] retrieve thread has finished
[2026-01-23 13:28:16] 2026-01-23 18:27:46,088 | INFO     | [job] job monitor thread has finished
[2026-01-23 13:28:16] 2026-01-23 18:27:46,136 | INFO     | all job control threads have been joined
[2026-01-23 13:28:16] 2026-01-23 18:27:46,167 | INFO     | [data] control thread has finished
[2026-01-23 13:28:16] 2026-01-23 18:27:46,369 | INFO     | [payload] control thread has finished
[2026-01-23 13:28:16] 2026-01-23 18:27:46,837 | INFO     | [payload] failed_post thread has finished
[2026-01-23 13:28:16] 2026-01-23 18:27:46,860 | INFO     | [payload] validate_pre thread has finished
[2026-01-23 13:28:16] 2026-01-23 18:27:46,904 | INFO     | [job] validate thread has finished
[2026-01-23 13:28:16] 2026-01-23 18:27:47,022 | INFO     | [data] copytool_in thread has finished
[2026-01-23 13:28:16] 2026-01-23 18:27:47,037 | INFO     | [job] create_data_payload thread has finished
[2026-01-23 13:28:16] 2026-01-23 18:27:47,088 | INFO     | [data] copytool_out thread has finished
[2026-01-23 13:28:16] 2026-01-23 18:27:47,141 | INFO     | [job] control thread has finished
[2026-01-23 13:28:16] 2026-01-23 18:27:47,239 | INFO     | [payload] validate_post thread has finished
[2026-01-23 13:28:16] 2026-01-23 18:27:47,309 | INFO     | [payload] execute_payloads thread has finished
[2026-01-23 13:28:16] 2026-01-23 18:27:47,475 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-23 13:28:16] 2026-01-23 18:27:47,664 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-23 13:28:16] 2026-01-23 18:27:48,669 | INFO     | [job] queue monitor thread has finished
[2026-01-23 13:28:16] 2026-01-23 18:27:51,481 | INFO     | [data] queue_monitor thread has finished
[2026-01-23 13:28:16] 2026-01-23 18:27:55,299 | INFO     | job.realtimelogging is not enabled
[2026-01-23 13:28:16] 2026-01-23 18:27:56,302 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-23 13:28:16] 2026-01-23 18:28:05,774 | INFO     | [monitor] cgroup control has ended
[2026-01-23 13:28:16] 2026-01-23 18:28:06,229 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140690579928896)>', '<ExcThread(monitor, started 140690235320064)>']
[2026-01-23 13:28:16] 2026-01-23 18:28:11,253 | INFO     | all workflow threads have been joined
[2026-01-23 13:28:16] 2026-01-23 18:28:11,254 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-23 13:28:16] 2026-01-23 18:28:11,254 | INFO     | traces error code: 0
[2026-01-23 13:28:16] 2026-01-23 18:28:11,254 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-23 13:28:16] 2026-01-23 18:28:16,272 | INFO     | PID=9170 has CPU usage=4.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-23 13:28:16] 2026-01-23 18:28:16,272 | INFO     | .. there are 6 such processes running
[2026-01-23 13:28:16] 2026-01-23 18:28:16,272 | INFO     | found 0 job(s) in 20 queues
[2026-01-23 13:28:16] 2026-01-23 18:28:16,272 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-23 13:28:16] 2026-01-23 18:28:16,273 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-23 13:28:16] 2026-01-23 18:28:16,273 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-23 13:28:16] 2026-01-23 18:28:16,273 | CRITICAL | thread 'MainThread' is not alive
[2026-01-23 13:28:16] 2026-01-23 18:28:16,273 | INFO     | [monitor] control thread has ended
[2026-01-23 13:28:16] 2026-01-23 18:28:16,418 [wrapper] ==== pilot stdout END ====
[2026-01-23 13:28:16] 2026-01-23 18:28:16,421 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-23 13:28:16] 2026-01-23 18:28:16,423 [wrapper] pilotpid: 9170
[2026-01-23 13:28:16] 2026-01-23 18:28:16,426 [wrapper] Pilot exit status: 0
[2026-01-23 13:28:16] 2026-01-23 18:28:16,437 [wrapper] pandaids: 6969846262
[2026-01-23 13:28:16] 2026-01-23 18:28:16,481 [wrapper] cleanup supervisor_pilot  156892 9171
[2026-01-23 13:28:16] 2026-01-23 18:28:16,484 [wrapper] Test setup, not cleaning
[2026-01-23 13:28:16] 2026-01-23 18:28:16,486 [wrapper] apfmon messages muted
[2026-01-23 13:28:16] 2026-01-23 18:28:16,489 [wrapper] ==== wrapper stdout END ====
[2026-01-23 13:28:16] 2026-01-23 18:28:16,491 [wrapper] ==== wrapper stderr END ====
[2026-01-23 13:28:16]  *** Error codes and diagnostics ***
[2026-01-23 13:28:16]     "exeErrorCode": 0,
[2026-01-23 13:28:16]     "exeErrorDiag": "",
[2026-01-23 13:28:16]     "pilotErrorCode": 0,
[2026-01-23 13:28:16]     "pilotErrorDiag": "",
[2026-01-23 13:28:16]  *** Listing of results directory ***
[2026-01-23 13:28:16] total 738400
[2026-01-23 13:28:16] -rw-r--r--. 1 boincer umatlas      5112 Jan 14 18:30 queuedata.json
[2026-01-23 13:28:16] -rw-r--r--. 1 boincer umatlas    579449 Jan 14 18:30 pilot3.tar.gz
[2026-01-23 13:28:16] -rwx------. 1 boincer umatlas     36322 Jan 14 18:31 runpilot2-wrapper.sh
[2026-01-23 13:28:16] -rw-r--r--. 1 boincer umatlas       100 Jan 23 11:51 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-23 13:28:16] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 23 11:51 run_atlas
[2026-01-23 13:28:16] -rw-r--r--. 1 boincer umatlas       105 Jan 23 11:51 job.xml
[2026-01-23 13:28:16] -rw-r--r--. 2 boincer umatlas 599744626 Jan 23 11:51 EVNT.32794306._001554.pool.root.1
[2026-01-23 13:28:16] -rw-r--r--. 2 boincer umatlas     15847 Jan 23 11:51 start_atlas.sh
[2026-01-23 13:28:16] drwxrwx--x. 2 boincer umatlas      4096 Jan 23 11:51 shared
[2026-01-23 13:28:16] -rw-r--r--. 2 boincer umatlas    592408 Jan 23 11:51 input.tar.gz
[2026-01-23 13:28:16] -rw-r--r--. 1 boincer umatlas         0 Jan 23 11:51 boinc_lockfile
[2026-01-23 13:28:16] -rw-r--r--. 1 boincer umatlas      2508 Jan 23 11:51 pandaJob.out
[2026-01-23 13:28:16] -rw-------. 1 boincer umatlas        57 Jan 23 11:51 setup.sh.local
[2026-01-23 13:28:16] -rw-------. 1 boincer umatlas   1004246 Jan 23 11:51 agis_schedconf.cvmfs.json
[2026-01-23 13:28:16] -rw-------. 1 boincer umatlas   1516246 Jan 23 11:51 agis_ddmendpoints.agis.ALL.json
[2026-01-23 13:28:16] drwx------. 5 boincer umatlas      4096 Jan 23 11:51 pilot3
[2026-01-23 13:28:16] -rw-r--r--. 1 boincer umatlas      6659 Jan 23 13:19 init_data.xml
[2026-01-23 13:28:16] -rw-------. 1 boincer umatlas 150152705 Jan 23 13:27 HITS.48215263._038928.pool.root.1
[2026-01-23 13:28:16] -rw-r--r--. 1 boincer umatlas       531 Jan 23 13:27 boinc_task_state.xml
[2026-01-23 13:28:16] -rw-------. 1 boincer umatlas      1047 Jan 23 13:27 memory_monitor_summary.json
[2026-01-23 13:28:16] -rw-------. 1 boincer umatlas        95 Jan 23 13:27 pilot_heartbeat.json
[2026-01-23 13:28:16] -rw-------. 1 boincer umatlas    330528 Jan 23 13:27 log.48215263._038928.job.log.tgz.1
[2026-01-23 13:28:16] -rw-------. 1 boincer umatlas      7812 Jan 23 13:27 heartbeat.json
[2026-01-23 13:28:16] -rw-------. 1 boincer umatlas       889 Jan 23 13:28 pilotlog.txt
[2026-01-23 13:28:16] -rw-------. 1 boincer umatlas    813016 Jan 23 13:28 log.48215263._038928.job.log.1
[2026-01-23 13:28:16] -rw-------. 1 boincer umatlas       357 Jan 23 13:28 output.list
[2026-01-23 13:28:16] -rw-r--r--. 1 boincer umatlas       620 Jan 23 13:28 runtime_log
[2026-01-23 13:28:16] -rw-------. 1 boincer umatlas   1167360 Jan 23 13:28 result.tar.gz
[2026-01-23 13:28:16] -rw-r--r--. 1 boincer umatlas      9342 Jan 23 13:28 runtime_log.err
[2026-01-23 13:28:16] -rw-------. 1 boincer umatlas       652 Jan 23 13:28 EgrLDm6VP08n9Rq4apOajLDm4fhM0noT9bVo0NGKDmx1mKDmTiuBvn.diag
[2026-01-23 13:28:16] -rw-r--r--. 1 boincer umatlas      8192 Jan 23 13:28 boinc_mmap_file
[2026-01-23 13:28:16] -rw-r--r--. 1 boincer umatlas     21949 Jan 23 13:28 stderr.txt
[2026-01-23 13:28:16] -rw-r--r--. 1 boincer umatlas        27 Jan 23 13:28 wrapper_checkpoint.txt
[2026-01-23 13:28:16] HITS file was successfully produced:
[2026-01-23 13:28:16] -rw-------. 1 boincer umatlas 150152705 Jan 23 13:27 shared/HITS.pool.root.1
[2026-01-23 13:28:16]  *** Contents of shared directory: ***
[2026-01-23 13:28:16] total 734072
[2026-01-23 13:28:16] -rw-r--r--. 2 boincer umatlas 599744626 Jan 23 11:51 ATLAS.root_0
[2026-01-23 13:28:16] -rw-r--r--. 2 boincer umatlas     15847 Jan 23 11:51 start_atlas.sh
[2026-01-23 13:28:16] -rw-r--r--. 2 boincer umatlas    592408 Jan 23 11:51 input.tar.gz
[2026-01-23 13:28:16] -rw-------. 1 boincer umatlas 150152705 Jan 23 13:27 HITS.pool.root.1
[2026-01-23 13:28:16] -rw-------. 1 boincer umatlas   1167360 Jan 23 13:28 result.tar.gz
13:28:18 (5516): run_atlas exited; CPU time 31485.432631
13:28:18 (5516): called boinc_finish(0)

</stderr_txt>
]]>

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