Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
10:39:49 (2397885): wrapper (7.7.26015): starting
10:39:49 (2397885): wrapper: running run_atlas (--nthreads 9)
[2026-01-23 10:39:49] Arguments: --nthreads 9
[2026-01-23 10:39:49] Threads: 9
[2026-01-23 10:39:49] Checking for CVMFS
[2026-01-23 10:39:50] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-23 10:39:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-23 10:39:50] Running cvmfs_config stat atlas.cern.ch
[2026-01-23 10:39:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-23 10:39:51] 2.13.3.0 11888 113715 397148 155440 2 588 25076273 32935936 27630 16776704 0 418949688 99.498 565630784 36231 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-23 10:39:51] CVMFS is ok
[2026-01-23 10:39:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-23 10:39:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-23 10:39:51] Further information can be found at the LHC@home message board.
[2026-01-23 10:39:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-23 10:39:51] Checking for apptainer binary...
[2026-01-23 10:39:51] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-23 10:39:51] Running /usr/bin/apptainer --version
[2026-01-23 10:39:51] apptainer version 1.4.5-2.el9
[2026-01-23 10:39:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-23 10:39:52] c6-2-11-3.aglt2.org
[2026-01-23 10:39:52] apptainer works
[2026-01-23 10:39:52] Set ATHENA_PROC_NUMBER=9
[2026-01-23 10:39:52] Set ATHENA_CORE_NUMBER=9
[2026-01-23 10:39:52] Starting ATLAS job with PandaID=6978168603
[2026-01-23 10:39:52] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-23 13:47:41]  *** The last 200 lines of the pilot log: ***
[2026-01-23 13:47:41] 2026-01-23 18:46:42,633 | INFO     | extracted standard info from prmon json
[2026-01-23 13:47:41] 2026-01-23 18:46:42,633 | INFO     | extracted standard memory fields from prmon json
[2026-01-23 13:47:41] 2026-01-23 18:46:42,634 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-23 13:47:41] 2026-01-23 18:46:42,636 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-23 13:47:41] 2026-01-23 18:46:42,636 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-23 13:47:41] 2026-01-23 18:46:42,660 | INFO     | fitting pss+swap vs Time
[2026-01-23 13:47:41] 2026-01-23 18:46:42,660 | INFO     | sum of square deviations: 1869436522.5769258
[2026-01-23 13:47:41] 2026-01-23 18:46:42,661 | INFO     | sum of deviations: 13865425916.576916
[2026-01-23 13:47:41] 2026-01-23 18:46:42,662 | INFO     | mean x: 1769188439.1153846
[2026-01-23 13:47:41] 2026-01-23 18:46:42,662 | INFO     | mean y: 2523071.1153846155
[2026-01-23 13:47:41] 2026-01-23 18:46:42,662 | INFO     | intersect: -13119372718.747843
[2026-01-23 13:47:41] 2026-01-23 18:46:42,662 | INFO     | chi2: 2.591747388351477
[2026-01-23 13:47:41] 2026-01-23 18:46:42,662 | INFO     | sum of square deviations: 1719564797.8757143
[2026-01-23 13:47:41] 2026-01-23 18:46:42,680 | INFO     | sum of deviations: 25054859966.11299
[2026-01-23 13:47:41] 2026-01-23 18:46:42,680 | INFO     | mean x: 1769188286.6158192
[2026-01-23 13:47:41] 2026-01-23 18:46:42,680 | INFO     | mean y: 2534194.5310734464
[2026-01-23 13:47:41] 2026-01-23 18:46:42,680 | INFO     | intersect: -25775363113.907864
[2026-01-23 13:47:41] 2026-01-23 18:46:42,680 | INFO     | chi2: 1.9061946559971301
[2026-01-23 13:47:41] 2026-01-23 18:46:42,681 | INFO     | current chi2=1.9061946559971301 (change=26.451371589512966 %)
[2026-01-23 13:47:41] 2026-01-23 18:46:42,681 | INFO     | sum of square deviations: 1577903946.116282
[2026-01-23 13:47:41] 2026-01-23 18:46:42,682 | INFO     | sum of deviations: 24410269407.62789
[2026-01-23 13:47:41] 2026-01-23 18:46:42,682 | INFO     | mean x: 1769188134.1046512
[2026-01-23 13:47:41] 2026-01-23 18:46:42,682 | INFO     | mean y: 2533500.465116279
[2026-01-23 13:47:41] 2026-01-23 18:46:42,682 | INFO     | intersect: -27366913855.67355
[2026-01-23 13:47:41] 2026-01-23 18:46:42,682 | INFO     | chi2: 1.9081472260530579
[2026-01-23 13:47:41] 2026-01-23 18:46:42,682 | INFO     | current chi2=1.9081472260530579 (change=-0.1024328784987785 %)
[2026-01-23 13:47:41] 2026-01-23 18:46:42,683 | INFO     | right removable region: 171
[2026-01-23 13:47:41] 2026-01-23 18:46:42,683 | INFO     | sum of square deviations: 1719529783.1299484
[2026-01-23 13:47:41] 2026-01-23 18:46:42,704 | INFO     | sum of deviations: -21520345654.84181
[2026-01-23 13:47:41] 2026-01-23 18:46:42,704 | INFO     | mean x: 1769188591.6327684
[2026-01-23 13:47:41] 2026-01-23 18:46:42,704 | INFO     | mean y: 2558761.2485875706
[2026-01-23 13:47:41] 2026-01-23 18:46:42,704 | INFO     | intersect: 22144396834.69977
[2026-01-23 13:47:41] 2026-01-23 18:46:42,705 | INFO     | chi2: 0.8080982197146681
[2026-01-23 13:47:41] 2026-01-23 18:46:42,705 | INFO     | current chi2=0.8080982197146681 (change=68.82033243877707 %)
[2026-01-23 13:47:41] 2026-01-23 18:46:42,705 | INFO     | sum of square deviations: 1577866309.3662791
[2026-01-23 13:47:41] 2026-01-23 18:46:42,706 | INFO     | sum of deviations: -25836417791.703484
[2026-01-23 13:47:41] 2026-01-23 18:46:42,706 | INFO     | mean x: 1769188744.1453488
[2026-01-23 13:47:41] 2026-01-23 18:46:42,706 | INFO     | mean y: 2563361.3081395347
[2026-01-23 13:47:41] 2026-01-23 18:46:42,706 | INFO     | intersect: 28971747426.38702
[2026-01-23 13:47:41] 2026-01-23 18:46:42,707 | INFO     | chi2: 0.7617774676260916
[2026-01-23 13:47:41] 2026-01-23 18:46:42,707 | INFO     | current chi2=0.7617774676260916 (change=5.732069562649449 %)
[2026-01-23 13:47:41] 2026-01-23 18:46:42,707 | INFO     | left removable region: 20
[2026-01-23 13:47:41] 2026-01-23 18:46:42,723 | INFO     | sum of square deviations: 1067569093.7748342
[2026-01-23 13:47:41] 2026-01-23 18:46:42,724 | INFO     | sum of deviations: -7241174822.8609295
[2026-01-23 13:47:41] 2026-01-23 18:46:42,724 | INFO     | mean x: 1769188713.6622517
[2026-01-23 13:47:41] 2026-01-23 18:46:42,725 | INFO     | mean y: 2568388.7086092713
[2026-01-23 13:47:41] 2026-01-23 18:46:42,725 | INFO     | intersect: 12002732916.6664
[2026-01-23 13:47:41] 2026-01-23 18:46:42,725 | INFO     | chi2: 0.03667246438981233
[2026-01-23 13:47:41] 2026-01-23 18:46:42,725 | INFO     | current memory leak: -6.78 B/s (using 151 data points, chi2=0.04)
[2026-01-23 13:47:41] 2026-01-23 18:46:42,726 | INFO     | could have reported an average CPU frequency of 2686 MHz (10 samples)
[2026-01-23 13:47:41] 2026-01-23 18:46:42,726 | INFO     | ..............................
[2026-01-23 13:47:41] 2026-01-23 18:46:42,726 | INFO     | . Timing measurements:
[2026-01-23 13:47:41] 2026-01-23 18:46:42,726 | INFO     | . get job = 0 s
[2026-01-23 13:47:41] 2026-01-23 18:46:42,726 | INFO     | . initial setup = 25 s
[2026-01-23 13:47:41] 2026-01-23 18:46:42,726 | INFO     | . payload setup = 25 s
[2026-01-23 13:47:41] 2026-01-23 18:46:42,726 | INFO     | . stage-in = 0 s
[2026-01-23 13:47:41] 2026-01-23 18:46:42,726 | INFO     | . payload execution = 11088 s
[2026-01-23 13:47:41] 2026-01-23 18:46:42,726 | INFO     | . stage-out = 5 s
[2026-01-23 13:47:41] 2026-01-23 18:46:42,726 | INFO     | . log creation = 0 s
[2026-01-23 13:47:41] 2026-01-23 18:46:42,726 | INFO     | ..............................
[2026-01-23 13:47:41] 2026-01-23 18:46:43,904 | INFO     | 
[2026-01-23 13:47:41] 2026-01-23 18:46:43,904 | INFO     | job summary report
[2026-01-23 13:47:41] 2026-01-23 18:46:43,904 | INFO     | --------------------------------------------------
[2026-01-23 13:47:41] 2026-01-23 18:46:43,905 | INFO     | PanDA job id: 6978168603
[2026-01-23 13:47:41] 2026-01-23 18:46:43,905 | INFO     | task id: 48310670
[2026-01-23 13:47:41] 2026-01-23 18:46:43,905 | INFO     | errors: (none)
[2026-01-23 13:47:41] 2026-01-23 18:46:43,905 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-23 13:47:41] 2026-01-23 18:46:43,905 | INFO     | pilot state: finished 
[2026-01-23 13:47:41] 2026-01-23 18:46:43,905 | INFO     | transexitcode: 0
[2026-01-23 13:47:41] 2026-01-23 18:46:43,905 | INFO     | exeerrorcode: 0
[2026-01-23 13:47:41] 2026-01-23 18:46:43,905 | INFO     | exeerrordiag: 
[2026-01-23 13:47:41] 2026-01-23 18:46:43,905 | INFO     | exitcode: 0
[2026-01-23 13:47:41] 2026-01-23 18:46:43,905 | INFO     | exitmsg: OK
[2026-01-23 13:47:41] 2026-01-23 18:46:43,905 | INFO     | cpuconsumptiontime: 37758 s
[2026-01-23 13:47:41] 2026-01-23 18:46:43,905 | INFO     | nevents: 400
[2026-01-23 13:47:41] 2026-01-23 18:46:43,905 | INFO     | neventsw: 0
[2026-01-23 13:47:41] 2026-01-23 18:46:43,906 | INFO     | pid: 2423381
[2026-01-23 13:47:41] 2026-01-23 18:46:43,906 | INFO     | pgrp: 2423381
[2026-01-23 13:47:41] 2026-01-23 18:46:43,906 | INFO     | corecount: 9
[2026-01-23 13:47:41] 2026-01-23 18:46:43,906 | INFO     | event service: False
[2026-01-23 13:47:41] 2026-01-23 18:46:43,906 | INFO     | sizes: {0: 2283810, 1: 2284271, 11118: 2313330, 11119: 2313329, 11125: 2322383, 11126: 2322439, 11128: 2322761}
[2026-01-23 13:47:41] 2026-01-23 18:46:43,906 | INFO     | --------------------------------------------------
[2026-01-23 13:47:41] 2026-01-23 18:46:43,906 | INFO     | 
[2026-01-23 13:47:41] 2026-01-23 18:46:43,906 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-01-23 13:47:41] 2026-01-23 18:46:43,961 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-23 13:47:41] 2026-01-23 18:46:43,962 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-23 13:47:41] 2026-01-23 18:46:43,962 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-23 13:47:41] 2026-01-23 18:46:43,962 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-23 13:47:41] 2026-01-23 18:46:43,962 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-23 13:47:41] 2026-01-23 18:46:43,962 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-23 13:47:41] 2026-01-23 18:46:43,962 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-23 13:47:41] 2026-01-23 18:46:43,962 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-23 13:47:41] 2026-01-23 18:46:43,962 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-23 13:47:41] 2026-01-23 18:46:43,962 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-23 13:47:41] 2026-01-23 18:46:43,962 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-23 13:47:41] 2026-01-23 18:46:43,963 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-23 13:47:41] 2026-01-23 18:46:43,963 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-23 13:47:41] 2026-01-23 18:46:43,963 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-23 13:47:41] 2026-01-23 18:46:43,963 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-23 13:47:41] 2026-01-23 18:46:43,963 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-23 13:47:41] 2026-01-23 18:46:43,963 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-23 13:47:41] 2026-01-23 18:46:43,963 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-23 13:47:41] 2026-01-23 18:46:43,963 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-23 13:47:41] 2026-01-23 18:46:43,963 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-23 13:47:41] 2026-01-23 18:46:43,963 | INFO     | job 6978168603 has completed (purged errors)
[2026-01-23 13:47:41] 2026-01-23 18:46:43,963 | INFO     | overall cleanup function is called
[2026-01-23 13:47:41] 2026-01-23 18:46:44,873 | INFO     | number of running child processes to parent process 2423381: 1
[2026-01-23 13:47:41] 2026-01-23 18:46:44,874 | INFO     | maximum number of monitored processes: 6
[2026-01-23 13:47:41] 2026-01-23 18:46:44,874 | INFO     | aborting job monitoring since job object (job id=6978168603) has expired
[2026-01-23 13:47:41] 2026-01-23 18:46:45,006 | INFO     | --- collectZombieJob: --- 10, [2423381]
[2026-01-23 13:47:41] 2026-01-23 18:46:45,006 | INFO     | zombie collector waiting for pid 2423381
[2026-01-23 13:47:41] 2026-01-23 18:46:45,007 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-23 13:47:41] 2026-01-23 18:46:45,007 | INFO     | collected zombie processes
[2026-01-23 13:47:41] 2026-01-23 18:46:45,007 | INFO     | will attempt to kill all subprocesses of pid=2423381
[2026-01-23 13:47:41] 2026-01-23 18:46:45,892 | INFO     | process IDs to be killed: [2423381] (in reverse order)
[2026-01-23 13:47:41] 2026-01-23 18:46:46,402 | WARNING  | found no corresponding commands to process id(s)
[2026-01-23 13:47:41] 2026-01-23 18:46:46,403 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-23 13:47:41] 2026-01-23 18:46:46,442 | INFO     | did not find any defunct processes belonging to 2423381
[2026-01-23 13:47:41] 2026-01-23 18:46:46,479 | INFO     | did not find any defunct processes belonging to 2423381
[2026-01-23 13:47:41] 2026-01-23 18:46:46,480 | INFO     | ready for new job
[2026-01-23 13:47:41] 2026-01-23 18:46:46,480 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-23 13:47:41] 2026-01-23 18:46:46,485 | INFO     | **************************************
[2026-01-23 13:47:41] 2026-01-23 18:46:46,486 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-23 13:47:41] 2026-01-23 18:46:46,486 | INFO     | **************************************
[2026-01-23 13:47:41] 2026-01-23 18:46:46,486 | INFO     | 
[2026-01-23 13:47:41] 2026-01-23 18:46:46,496 | INFO     | architecture information:
[2026-01-23 13:47:41] 2026-01-23 18:46:46,499 | INFO     | executing command: cat /etc/os-release
[2026-01-23 13:47:41] 2026-01-23 18:46:46,540 | INFO     | cat /etc/os-release:
[2026-01-23 13:47:41] NAME="CentOS Linux"
[2026-01-23 13:47:41] VERSION="7 (Core)"
[2026-01-23 13:47:41] ID="centos"
[2026-01-23 13:47:41] ID_LIKE="rhel fedora"
[2026-01-23 13:47:41] VERSION_ID="7"
[2026-01-23 13:47:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-23 13:47:41] ANSI_COLOR="0;31"
[2026-01-23 13:47:41] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-23 13:47:41] HOME_URL="https://www.centos.org/"
[2026-01-23 13:47:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-23 13:47:41] 
[2026-01-23 13:47:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-23 13:47:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-23 13:47:41] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-23 13:47:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-23 13:47:41] 
[2026-01-23 13:47:41] 2026-01-23 18:46:46,541 | INFO     | **************************************
[2026-01-23 13:47:41] 2026-01-23 18:46:47,046 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-01-23 13:47:41] 2026-01-23 18:46:47,189 | INFO     | sufficient remaining disk space (71082967040 B)
[2026-01-23 13:47:41] 2026-01-23 18:46:47,189 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-23 13:47:41] 2026-01-23 18:46:47,189 | INFO     | current server update state: UPDATING_FINAL
[2026-01-23 13:47:41] 2026-01-23 18:46:47,189 | INFO     | update_server=False
[2026-01-23 13:47:41] 2026-01-23 18:46:47,189 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-23 13:47:41] 2026-01-23 18:46:47,189 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-23 13:47:41] 2026-01-23 18:46:47,380 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-23 13:47:41] 2026-01-23 18:46:47,380 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-23 13:47:41] 2026-01-23 18:46:47,381 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-23 13:47:41] 2026-01-23 18:46:47,381 | INFO     | will abort loop
[2026-01-23 13:47:41] 2026-01-23 18:46:48,068 | INFO     | all data control threads have been joined
[2026-01-23 13:47:41] 2026-01-23 18:46:48,195 | INFO     | [job] retrieve thread has finished
[2026-01-23 13:47:41] 2026-01-23 18:46:48,204 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-23 13:47:41] 2026-01-23 18:46:48,287 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-23 13:47:41] 2026-01-23 18:46:48,373 | INFO     | all payload control threads have been joined
[2026-01-23 13:47:41] 2026-01-23 18:46:48,379 | INFO     | all job control threads have been joined
[2026-01-23 13:47:41] 2026-01-23 18:46:48,387 | INFO     | [job] job monitor thread has finished
[2026-01-23 13:47:41] 2026-01-23 18:46:48,407 | INFO     | [payload] execute_payloads thread has finished
[2026-01-23 13:47:41] 2026-01-23 18:46:48,408 | INFO     | [job] create_data_payload thread has finished
[2026-01-23 13:47:41] 2026-01-23 18:46:48,415 | INFO     | [job] validate thread has finished
[2026-01-23 13:47:41] 2026-01-23 18:46:48,873 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-23 13:47:41] 2026-01-23 18:46:48,893 | INFO     | [payload] failed_post thread has finished
[2026-01-23 13:47:41] 2026-01-23 18:46:49,017 | INFO     | [payload] validate_pre thread has finished
[2026-01-23 13:47:41] 2026-01-23 18:46:49,018 | INFO     | [data] copytool_in thread has finished
[2026-01-23 13:47:41] 2026-01-23 18:46:49,021 | INFO     | [payload] validate_post thread has finished
[2026-01-23 13:47:41] 2026-01-23 18:46:49,074 | INFO     | [data] control thread has finished
[2026-01-23 13:47:41] 2026-01-23 18:46:49,204 | INFO     | [data] copytool_out thread has finished
[2026-01-23 13:47:41] 2026-01-23 18:46:49,382 | INFO     | [payload] control thread has finished
[2026-01-23 13:47:41] 2026-01-23 18:46:49,395 | INFO     | [job] control thread has finished
[2026-01-23 13:47:41] 2026-01-23 18:46:49,879 | INFO     | [job] queue monitor thread has finished
[2026-01-23 13:47:41] 2026-01-23 18:46:52,216 | INFO     | [data] queue_monitor thread has finished
[2026-01-23 13:47:41] 2026-01-23 18:47:19,766 | INFO     | PID=2408874 has CPU usage=8.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-23 13:47:41] 2026-01-23 18:47:19,766 | INFO     | .. there are 31 such processes running
[2026-01-23 13:47:41] 2026-01-23 18:47:19,767 | INFO     | found 0 job(s) in 20 queues
[2026-01-23 13:47:41] 2026-01-23 18:47:19,767 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-23 13:47:41] 2026-01-23 18:47:19,767 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-23 13:47:41] 2026-01-23 18:47:33,988 | INFO     | [monitor] cgroup control has ended
[2026-01-23 13:47:41] 2026-01-23 18:47:34,823 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140409436538688)>', '<ExcThread(monitor, started 140408722028288)>']
[2026-01-23 13:47:41] 2026-01-23 18:47:34,899 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-23 13:47:41] 2026-01-23 18:47:34,900 | INFO     | [monitor] control thread has ended
[2026-01-23 13:47:41] 2026-01-23 18:47:39,849 | INFO     | all workflow threads have been joined
[2026-01-23 13:47:41] 2026-01-23 18:47:39,849 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-23 13:47:41] 2026-01-23 18:47:39,851 | INFO     | traces error code: 0
[2026-01-23 13:47:41] 2026-01-23 18:47:39,851 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-23 13:47:41] 2026-01-23 18:47:40,105 [wrapper] ==== pilot stdout END ====
[2026-01-23 13:47:41] 2026-01-23 18:47:40,107 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-23 13:47:41] 2026-01-23 18:47:40,110 [wrapper] pilotpid: 2408874
[2026-01-23 13:47:41] 2026-01-23 18:47:40,112 [wrapper] Pilot exit status: 0
[2026-01-23 13:47:41] 2026-01-23 18:47:40,150 [wrapper] pandaids: 6978168603
[2026-01-23 13:47:41] 2026-01-23 18:47:40,307 [wrapper] cleanup supervisor_pilot 2967558 2408875
[2026-01-23 13:47:41] 2026-01-23 18:47:40,358 [wrapper] Test setup, not cleaning
[2026-01-23 13:47:41] 2026-01-23 18:47:40,372 [wrapper] apfmon messages muted
[2026-01-23 13:47:41] 2026-01-23 18:47:40,384 [wrapper] ==== wrapper stdout END ====
[2026-01-23 13:47:41] 2026-01-23 18:47:40,435 [wrapper] ==== wrapper stderr END ====
[2026-01-23 13:47:41]  *** Error codes and diagnostics ***
[2026-01-23 13:47:41]     "exeErrorCode": 0,
[2026-01-23 13:47:41]     "exeErrorDiag": "",
[2026-01-23 13:47:41]     "pilotErrorCode": 0,
[2026-01-23 13:47:41]     "pilotErrorDiag": "",
[2026-01-23 13:47:41]  *** Listing of results directory ***
[2026-01-23 13:47:41] total 675340
[2026-01-23 13:47:41] -rw-r--r--. 1 boincer umatlas    584422 Jan 23 00:17 pilot3.tar.gz
[2026-01-23 13:47:41] -rwx------. 1 boincer umatlas     36322 Jan 23 00:19 runpilot2-wrapper.sh
[2026-01-23 13:47:41] -rw-r--r--. 1 boincer umatlas      5111 Jan 23 00:20 queuedata.json
[2026-01-23 13:47:41] -rw-r--r--. 1 boincer umatlas       100 Jan 23 10:39 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-23 13:47:41] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 23 10:39 run_atlas
[2026-01-23 13:47:41] -rw-r--r--. 1 boincer umatlas       105 Jan 23 10:39 job.xml
[2026-01-23 13:47:41] -rw-r--r--. 2 boincer umatlas 503111207 Jan 23 10:39 EVNT.48310665._000091.pool.root.1
[2026-01-23 13:47:41] -rw-r--r--. 2 boincer umatlas     15845 Jan 23 10:39 start_atlas.sh
[2026-01-23 13:47:41] drwxrwx--x. 2 boincer umatlas      4096 Jan 23 10:39 shared
[2026-01-23 13:47:41] -rw-r--r--. 2 boincer umatlas    597751 Jan 23 10:39 input.tar.gz
[2026-01-23 13:47:41] -rw-r--r--. 1 boincer umatlas         0 Jan 23 10:39 boinc_lockfile
[2026-01-23 13:47:41] -rw-r--r--. 1 boincer umatlas      2524 Jan 23 10:39 pandaJob.out
[2026-01-23 13:47:41] -rw-------. 1 boincer umatlas        57 Jan 23 10:39 setup.sh.local
[2026-01-23 13:47:41] -rw-------. 1 boincer umatlas   1004238 Jan 23 10:40 agis_schedconf.cvmfs.json
[2026-01-23 13:47:41] -rw-------. 1 boincer umatlas       442 Jan 23 10:41 workernode_map.json
[2026-01-23 13:47:41] drwx------. 5 boincer umatlas      4096 Jan 23 10:41 pilot3
[2026-01-23 13:47:41] -rw-r--r--. 1 boincer umatlas      6876 Jan 23 13:37 init_data.xml
[2026-01-23 13:47:41] -rw-------. 1 boincer umatlas 180795481 Jan 23 13:45 HITS.48310670._004533.pool.root.1
[2026-01-23 13:47:41] -rw-r--r--. 1 boincer umatlas       531 Jan 23 13:45 boinc_task_state.xml
[2026-01-23 13:47:41] -rw-------. 1 boincer umatlas      1044 Jan 23 13:46 memory_monitor_summary.json
[2026-01-23 13:47:41] -rw-------. 1 boincer umatlas   1516246 Jan 23 13:46 agis_ddmendpoints.agis.ALL.json
[2026-01-23 13:47:41] -rw-------. 1 boincer umatlas    449169 Jan 23 13:46 log.48310670._004533.job.log.tgz.1
[2026-01-23 13:47:41] -rw-------. 1 boincer umatlas      6397 Jan 23 13:46 heartbeat.json
[2026-01-23 13:47:41] -rw-------. 1 boincer umatlas        95 Jan 23 13:47 pilot_heartbeat.json
[2026-01-23 13:47:41] -rw-r--r--. 1 boincer umatlas      8192 Jan 23 13:47 boinc_mmap_file
[2026-01-23 13:47:41] -rw-r--r--. 1 boincer umatlas        28 Jan 23 13:47 wrapper_checkpoint.txt
[2026-01-23 13:47:41] -rw-------. 1 boincer umatlas      5006 Jan 23 13:47 pilotlog.txt
[2026-01-23 13:47:41] -rw-------. 1 boincer umatlas   1401603 Jan 23 13:47 log.48310670._004533.job.log.1
[2026-01-23 13:47:41] -rw-------. 1 boincer umatlas       357 Jan 23 13:47 output.list
[2026-01-23 13:47:41] -rw-r--r--. 1 boincer umatlas       620 Jan 23 13:47 runtime_log
[2026-01-23 13:47:41] -rw-------. 1 boincer umatlas   1863680 Jan 23 13:47 result.tar.gz
[2026-01-23 13:47:41] -rw-r--r--. 1 boincer umatlas      9347 Jan 23 13:47 runtime_log.err
[2026-01-23 13:47:41] -rw-------. 1 boincer umatlas       655 Jan 23 13:47 1GpLDmgkO38n9Rq4apOajLDm4fhM0noT9bVo0NGKDmiLvKDmXsogTn.diag
[2026-01-23 13:47:41] -rw-r--r--. 1 boincer umatlas     21132 Jan 23 13:47 stderr.txt
[2026-01-23 13:47:41] HITS file was successfully produced:
[2026-01-23 13:47:41] -rw-------. 1 boincer umatlas 180795481 Jan 23 13:45 shared/HITS.pool.root.1
[2026-01-23 13:47:41]  *** Contents of shared directory: ***
[2026-01-23 13:47:41] total 670308
[2026-01-23 13:47:41] -rw-r--r--. 2 boincer umatlas 503111207 Jan 23 10:39 ATLAS.root_0
[2026-01-23 13:47:41] -rw-r--r--. 2 boincer umatlas     15845 Jan 23 10:39 start_atlas.sh
[2026-01-23 13:47:41] -rw-r--r--. 2 boincer umatlas    597751 Jan 23 10:39 input.tar.gz
[2026-01-23 13:47:41] -rw-------. 1 boincer umatlas 180795481 Jan 23 13:45 HITS.pool.root.1
[2026-01-23 13:47:41] -rw-------. 1 boincer umatlas   1863680 Jan 23 13:47 result.tar.gz
13:47:42 (2397885): run_atlas exited; CPU time 38294.070960
13:47:42 (2397885): called boinc_finish(0)

</stderr_txt>
]]>

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