Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
18:37:48 (36471): wrapper (7.7.26015): starting
18:37:48 (36471): wrapper: running run_atlas (--nthreads 4)
[2026-01-23 18:37:48] Arguments: --nthreads 4
[2026-01-23 18:37:48] Threads: 4
[2026-01-23 18:37:48] Checking for CVMFS
[2026-01-23 18:37:52] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-23 18:37:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-23 18:37:55] Running cvmfs_config stat atlas.cern.ch
[2026-01-23 18:37:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-23 18:37:55] 2.11.0.0 36674 0 25216 155453 3 1 3730671 4096000 0 130560 0 0 0.000 1336 733 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2026-01-23 18:37:55] CVMFS is ok
[2026-01-23 18:37:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-23 18:37:55] Small home clusters do not require a local http proxy but it is suggested if
[2026-01-23 18:37:55] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-01-23 18:37:55] Further information can be found at the LHC@home message board.
[2026-01-23 18:37:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-23 18:37:55] Checking for apptainer binary...
[2026-01-23 18:37:55] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-23 18:37:55] Running /usr/bin/apptainer --version
[2026-01-23 18:37:56] apptainer version 1.4.5-2.fc43
[2026-01-23 18:37:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-23 18:38:17] fedora
[2026-01-23 18:38:17] apptainer works
[2026-01-23 18:38:17] Set ATHENA_PROC_NUMBER=4
[2026-01-23 18:38:17] Set ATHENA_CORE_NUMBER=4
[2026-01-23 18:38:17] Starting ATLAS job with PandaID=6978383865
[2026-01-23 18:38:17] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-23 21:38:08]  *** The last 200 lines of the pilot log: ***
[2026-01-23 21:38:08] 2026-01-24 02:37:36,142 | INFO     | reading metadata from: /var/lib/boinc/slots/1/PanDA_Pilot-6978383865/jobReport.json
[2026-01-23 21:38:08] 2026-01-24 02:37:36,143 | INFO     | added worker_node to metadata from /var/lib/boinc/slots/1/workernode_map.json
[2026-01-23 21:38:08] 2026-01-24 02:37:36,144 | INFO     | this job has now completed (state=finished)
[2026-01-23 21:38:08] 2026-01-24 02:37:36,144 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-23 21:38:08] 2026-01-24 02:37:36,144 | INFO     | log transfer has been attempted: DONE
[2026-01-23 21:38:08] 2026-01-24 02:37:36,144 | INFO     | job 6978383865 has finished - writing final server update
[2026-01-23 21:38:08] 2026-01-24 02:37:36,144 | INFO     | total number of processed events: 400 (read)
[2026-01-23 21:38:08] 2026-01-24 02:37:36,145 | INFO     | using path: /var/lib/boinc/slots/1/PanDA_Pilot-6978383865/memory_monitor_summary.json (trf name=prmon)
[2026-01-23 21:38:08] 2026-01-24 02:37:36,145 | INFO     | extracted standard info from prmon json
[2026-01-23 21:38:08] 2026-01-24 02:37:36,145 | INFO     | extracted standard memory fields from prmon json
[2026-01-23 21:38:08] 2026-01-24 02:37:36,145 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-23 21:38:08] 2026-01-24 02:37:36,145 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-23 21:38:08] 2026-01-24 02:37:36,145 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-23 21:38:08] 2026-01-24 02:37:36,147 | INFO     | fitting pss+swap vs Time
[2026-01-23 21:38:08] 2026-01-24 02:37:36,147 | INFO     | sum of square deviations: 1690450300.0
[2026-01-23 21:38:08] 2026-01-24 02:37:36,148 | INFO     | sum of deviations: -38815851992.5
[2026-01-23 21:38:08] 2026-01-24 02:37:36,148 | INFO     | mean x: 1769216879.5
[2026-01-23 21:38:08] 2026-01-24 02:37:36,148 | INFO     | mean y: 2416024.1875
[2026-01-23 21:38:08] 2026-01-24 02:37:36,148 | INFO     | intersect: 40626893737.19965
[2026-01-23 21:38:08] 2026-01-24 02:37:36,148 | INFO     | chi2: 1.7150879581794247
[2026-01-23 21:38:08] 2026-01-24 02:37:36,148 | INFO     | sum of square deviations: 1550429070.0
[2026-01-23 21:38:08] 2026-01-24 02:37:36,149 | INFO     | sum of deviations: -37001496143.99997
[2026-01-23 21:38:08] 2026-01-24 02:37:36,149 | INFO     | mean x: 1769216727.0
[2026-01-23 21:38:08] 2026-01-24 02:37:36,149 | INFO     | mean y: 2418001.16374269
[2026-01-23 21:38:08] 2026-01-24 02:37:36,149 | INFO     | intersect: 42225353038.1021
[2026-01-23 21:38:08] 2026-01-24 02:37:36,149 | INFO     | chi2: 1.7087287082328617
[2026-01-23 21:38:08] 2026-01-24 02:37:36,149 | INFO     | current chi2=1.7087287082328617 (change=0.3707827296107533 %)
[2026-01-23 21:38:08] 2026-01-24 02:37:36,149 | INFO     | right removable region: 170
[2026-01-23 21:38:08] 2026-01-24 02:37:36,150 | INFO     | sum of square deviations: 1550429070.0
[2026-01-23 21:38:08] 2026-01-24 02:37:36,150 | INFO     | sum of deviations: -57540240734.99999
[2026-01-23 21:38:08] 2026-01-24 02:37:36,150 | INFO     | mean x: 1769217032.0
[2026-01-23 21:38:08] 2026-01-24 02:37:36,150 | INFO     | mean y: 2435976.356725146
[2026-01-23 21:38:08] 2026-01-24 02:37:36,150 | INFO     | intersect: 65662436748.75077
[2026-01-23 21:38:08] 2026-01-24 02:37:36,150 | INFO     | chi2: 0.3601483513124248
[2026-01-23 21:38:08] 2026-01-24 02:37:36,150 | INFO     | current chi2=0.3601483513124248 (change=79.00117311215197 %)
[2026-01-23 21:38:08] 2026-01-24 02:37:36,151 | INFO     | sum of square deviations: 1418361477.5
[2026-01-23 21:38:08] 2026-01-24 02:37:36,151 | INFO     | sum of deviations: -49860403992.00001
[2026-01-23 21:38:08] 2026-01-24 02:37:36,151 | INFO     | mean x: 1769217184.5
[2026-01-23 21:38:08] 2026-01-24 02:37:36,151 | INFO     | mean y: 2427101.4457831327
[2026-01-23 21:38:08] 2026-01-24 02:37:36,151 | INFO     | intersect: 62196645548.66726
[2026-01-23 21:38:08] 2026-01-24 02:37:36,151 | INFO     | chi2: 0.35079024545277787
[2026-01-23 21:38:08] 2026-01-24 02:37:36,151 | INFO     | current chi2=0.35079024545277787 (change=2.5984030818258166 %)
[2026-01-23 21:38:08] 2026-01-24 02:37:36,152 | INFO     | left removable region: 20
[2026-01-23 21:38:08] 2026-01-24 02:37:36,152 | INFO     | sum of square deviations: 1046484737.5
[2026-01-23 21:38:08] 2026-01-24 02:37:36,152 | INFO     | sum of deviations: -31481731163.499996
[2026-01-23 21:38:08] 2026-01-24 02:37:36,152 | INFO     | mean x: 1769217306.5
[2026-01-23 21:38:08] 2026-01-24 02:37:36,152 | INFO     | mean y: 2408205.8866666667
[2026-01-23 21:38:08] 2026-01-24 02:37:36,152 | INFO     | intersect: 53226331706.29469
[2026-01-23 21:38:08] 2026-01-24 02:37:36,152 | INFO     | chi2: 0.2950037931925708
[2026-01-23 21:38:08] 2026-01-24 02:37:36,152 | INFO     | current memory leak: -30.08 B/s (using 150 data points, chi2=0.30)
[2026-01-23 21:38:08] 2026-01-24 02:37:36,153 | INFO     | could have reported an average CPU frequency of 3228 MHz (9 samples)
[2026-01-23 21:38:08] 2026-01-24 02:37:36,153 | INFO     | ..............................
[2026-01-23 21:38:08] 2026-01-24 02:37:36,153 | INFO     | . Timing measurements:
[2026-01-23 21:38:08] 2026-01-24 02:37:36,153 | INFO     | . get job = 0 s
[2026-01-23 21:38:08] 2026-01-24 02:37:36,153 | INFO     | . initial setup = 7 s
[2026-01-23 21:38:08] 2026-01-24 02:37:36,153 | INFO     | . payload setup = 5 s
[2026-01-23 21:38:08] 2026-01-24 02:37:36,153 | INFO     | . stage-in = 0 s
[2026-01-23 21:38:08] 2026-01-24 02:37:36,153 | INFO     | . payload execution = 10709 s
[2026-01-23 21:38:08] 2026-01-24 02:37:36,153 | INFO     | . stage-out = 0 s
[2026-01-23 21:38:08] 2026-01-24 02:37:36,153 | INFO     | . log creation = 0 s
[2026-01-23 21:38:08] 2026-01-24 02:37:36,153 | INFO     | ..............................
[2026-01-23 21:38:08] 2026-01-24 02:37:36,194 | INFO     | 
[2026-01-23 21:38:08] 2026-01-24 02:37:36,194 | INFO     | job summary report
[2026-01-23 21:38:08] 2026-01-24 02:37:36,194 | INFO     | --------------------------------------------------
[2026-01-23 21:38:08] 2026-01-24 02:37:36,194 | INFO     | PanDA job id: 6978383865
[2026-01-23 21:38:08] 2026-01-24 02:37:36,194 | INFO     | task id: 48310826
[2026-01-23 21:38:08] 2026-01-24 02:37:36,194 | INFO     | errors: (none)
[2026-01-23 21:38:08] 2026-01-24 02:37:36,194 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-23 21:38:08] 2026-01-24 02:37:36,194 | INFO     | pilot state: finished 
[2026-01-23 21:38:08] 2026-01-24 02:37:36,194 | INFO     | transexitcode: 0
[2026-01-23 21:38:08] 2026-01-24 02:37:36,194 | INFO     | exeerrorcode: 0
[2026-01-23 21:38:08] 2026-01-24 02:37:36,194 | INFO     | exeerrordiag: 
[2026-01-23 21:38:08] 2026-01-24 02:37:36,194 | INFO     | exitcode: 0
[2026-01-23 21:38:08] 2026-01-24 02:37:36,194 | INFO     | exitmsg: OK
[2026-01-23 21:38:08] 2026-01-24 02:37:36,194 | INFO     | cpuconsumptiontime: 41151 s
[2026-01-23 21:38:08] 2026-01-24 02:37:36,194 | INFO     | nevents: 400
[2026-01-23 21:38:08] 2026-01-24 02:37:36,194 | INFO     | neventsw: 0
[2026-01-23 21:38:08] 2026-01-24 02:37:36,195 | INFO     | pid: 45111
[2026-01-23 21:38:08] 2026-01-24 02:37:36,195 | INFO     | pgrp: 45111
[2026-01-23 21:38:08] 2026-01-24 02:37:36,195 | INFO     | corecount: 4
[2026-01-23 21:38:08] 2026-01-24 02:37:36,195 | INFO     | event service: False
[2026-01-23 21:38:08] 2026-01-24 02:37:36,195 | INFO     | sizes: {0: 2284237, 11: 2284237, 10719: 2313200, 10720: 2322198, 10723: 2322512}
[2026-01-23 21:38:08] 2026-01-24 02:37:36,195 | INFO     | --------------------------------------------------
[2026-01-23 21:38:08] 2026-01-24 02:37:36,195 | INFO     | 
[2026-01-23 21:38:08] 2026-01-24 02:37:36,195 | INFO     | executing command: ls -lF /var/lib/boinc/slots/1
[2026-01-23 21:38:08] 2026-01-24 02:37:36,206 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-23 21:38:08] 2026-01-24 02:37:36,207 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-23 21:38:08] 2026-01-24 02:37:36,207 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-23 21:38:08] 2026-01-24 02:37:36,207 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-23 21:38:08] 2026-01-24 02:37:36,207 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-23 21:38:08] 2026-01-24 02:37:36,207 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-23 21:38:08] 2026-01-24 02:37:36,207 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-23 21:38:08] 2026-01-24 02:37:36,207 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-23 21:38:08] 2026-01-24 02:37:36,207 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-23 21:38:08] 2026-01-24 02:37:36,207 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-23 21:38:08] 2026-01-24 02:37:36,207 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-23 21:38:08] 2026-01-24 02:37:36,207 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-23 21:38:08] 2026-01-24 02:37:36,208 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-23 21:38:08] 2026-01-24 02:37:36,208 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-23 21:38:08] 2026-01-24 02:37:36,208 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-23 21:38:08] 2026-01-24 02:37:36,208 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-23 21:38:08] 2026-01-24 02:37:36,208 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-23 21:38:08] 2026-01-24 02:37:36,208 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-23 21:38:08] 2026-01-24 02:37:36,208 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-23 21:38:08] 2026-01-24 02:37:36,208 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-23 21:38:08] 2026-01-24 02:37:36,208 | INFO     | job 6978383865 has completed (purged errors)
[2026-01-23 21:38:08] 2026-01-24 02:37:36,208 | INFO     | overall cleanup function is called
[2026-01-23 21:38:08] 2026-01-24 02:37:37,216 | INFO     | --- collectZombieJob: --- 10, [45111]
[2026-01-23 21:38:08] 2026-01-24 02:37:37,216 | INFO     | zombie collector waiting for pid 45111
[2026-01-23 21:38:08] 2026-01-24 02:37:37,217 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-23 21:38:08] 2026-01-24 02:37:37,217 | INFO     | collected zombie processes
[2026-01-23 21:38:08] 2026-01-24 02:37:37,217 | INFO     | will attempt to kill all subprocesses of pid=45111
[2026-01-23 21:38:08] 2026-01-24 02:37:37,274 | INFO     | process IDs to be killed: [45111] (in reverse order)
[2026-01-23 21:38:08] 2026-01-24 02:37:37,300 | WARNING  | found no corresponding commands to process id(s)
[2026-01-23 21:38:08] 2026-01-24 02:37:37,300 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-23 21:38:08] 2026-01-24 02:37:37,302 | INFO     | did not find any defunct processes belonging to 45111
[2026-01-23 21:38:08] 2026-01-24 02:37:37,304 | INFO     | did not find any defunct processes belonging to 45111
[2026-01-23 21:38:08] 2026-01-24 02:37:37,304 | INFO     | ready for new job
[2026-01-23 21:38:08] 2026-01-24 02:37:37,304 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-23 21:38:08] 2026-01-24 02:37:37,305 | INFO     | **************************************
[2026-01-23 21:38:08] 2026-01-24 02:37:37,305 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-23 21:38:08] 2026-01-24 02:37:37,306 | INFO     | **************************************
[2026-01-23 21:38:08] 2026-01-24 02:37:37,306 | INFO     | 
[2026-01-23 21:38:08] 2026-01-24 02:37:37,306 | INFO     | architecture information:
[2026-01-23 21:38:08] 2026-01-24 02:37:37,306 | INFO     | executing command: cat /etc/os-release
[2026-01-23 21:38:08] 2026-01-24 02:37:37,315 | INFO     | cat /etc/os-release:
[2026-01-23 21:38:08] NAME="CentOS Linux"
[2026-01-23 21:38:08] VERSION="7 (Core)"
[2026-01-23 21:38:08] ID="centos"
[2026-01-23 21:38:08] ID_LIKE="rhel fedora"
[2026-01-23 21:38:08] VERSION_ID="7"
[2026-01-23 21:38:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-23 21:38:08] ANSI_COLOR="0;31"
[2026-01-23 21:38:08] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-23 21:38:08] HOME_URL="https://www.centos.org/"
[2026-01-23 21:38:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-23 21:38:08] 
[2026-01-23 21:38:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-23 21:38:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-23 21:38:08] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-23 21:38:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-23 21:38:08] 
[2026-01-23 21:38:08] 2026-01-24 02:37:37,316 | INFO     | **************************************
[2026-01-23 21:38:08] 2026-01-24 02:37:37,602 | WARNING  | process 45111 can no longer be monitored (due to stat problems) - aborting
[2026-01-23 21:38:08] 2026-01-24 02:37:37,639 | INFO     | using path: /var/lib/boinc/slots/1/memory_monitor_summary.json (trf name=prmon)
[2026-01-23 21:38:08] 2026-01-24 02:37:37,683 | INFO     | number of running child processes to parent process 45111: 1
[2026-01-23 21:38:08] 2026-01-24 02:37:37,683 | INFO     | maximum number of monitored processes: 6
[2026-01-23 21:38:08] 2026-01-24 02:37:37,683 | INFO     | aborting job monitoring since job object (job id=6978383865) has expired
[2026-01-23 21:38:08] 2026-01-24 02:37:37,819 | INFO     | executing command: df -mP /var/lib/boinc/slots/1
[2026-01-23 21:38:08] 2026-01-24 02:37:37,835 | INFO     | sufficient remaining disk space (318091821056 B)
[2026-01-23 21:38:08] 2026-01-24 02:37:37,836 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-23 21:38:08] 2026-01-24 02:37:37,836 | INFO     | current server update state: UPDATING_FINAL
[2026-01-23 21:38:08] 2026-01-24 02:37:37,836 | INFO     | update_server=False
[2026-01-23 21:38:08] 2026-01-24 02:37:37,836 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-23 21:38:08] 2026-01-24 02:37:37,836 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-23 21:38:08] 2026-01-24 02:37:37,837 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-23 21:38:08] 2026-01-24 02:37:37,837 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-23 21:38:08] 2026-01-24 02:37:37,837 | INFO     | will abort loop
[2026-01-23 21:38:08] 2026-01-24 02:37:38,004 | INFO     | all payload control threads have been joined
[2026-01-23 21:38:08] 2026-01-24 02:37:38,127 | INFO     | all data control threads have been joined
[2026-01-23 21:38:08] 2026-01-24 02:37:38,430 | INFO     | all job control threads have been joined
[2026-01-23 21:38:08] 2026-01-24 02:37:38,842 | INFO     | [job] queue monitor thread has finished
[2026-01-23 21:38:08] 2026-01-24 02:37:38,843 | INFO     | [job] job monitor thread has finished
[2026-01-23 21:38:08] 2026-01-24 02:37:38,844 | INFO     | [job] retrieve thread has finished
[2026-01-23 21:38:08] 2026-01-24 02:37:38,876 | INFO     | [payload] execute_payloads thread has finished
[2026-01-23 21:38:08] 2026-01-24 02:37:39,010 | INFO     | [payload] control thread has finished
[2026-01-23 21:38:08] 2026-01-24 02:37:39,133 | INFO     | [data] control thread has finished
[2026-01-23 21:38:08] 2026-01-24 02:37:39,270 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-23 21:38:08] 2026-01-24 02:37:39,317 | INFO     | [payload] validate_post thread has finished
[2026-01-23 21:38:08] 2026-01-24 02:37:39,436 | INFO     | [job] control thread has finished
[2026-01-23 21:38:08] 2026-01-24 02:37:39,626 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-23 21:38:08] 2026-01-24 02:37:39,982 | INFO     | [payload] validate_pre thread has finished
[2026-01-23 21:38:08] 2026-01-24 02:37:39,986 | INFO     | [job] validate thread has finished
[2026-01-23 21:38:08] 2026-01-24 02:37:39,994 | INFO     | [job] create_data_payload thread has finished
[2026-01-23 21:38:08] 2026-01-24 02:37:40,021 | INFO     | [payload] failed_post thread has finished
[2026-01-23 21:38:08] 2026-01-24 02:37:40,077 | INFO     | [data] copytool_in thread has finished
[2026-01-23 21:38:08] 2026-01-24 02:37:41,277 | INFO     | [data] copytool_out thread has finished
[2026-01-23 21:38:08] 2026-01-24 02:37:41,844 | INFO     | [data] queue_monitor thread has finished
[2026-01-23 21:38:08] 2026-01-24 02:37:59,217 | INFO     | [monitor] cgroup control has ended
[2026-01-23 21:38:08] 2026-01-24 02:38:00,220 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140430204262208)>', '<ExcThread(monitor, started 140429559314176)>']
[2026-01-23 21:38:08] 2026-01-24 02:38:05,246 | INFO     | all workflow threads have been joined
[2026-01-23 21:38:08] 2026-01-24 02:38:05,247 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-23 21:38:08] 2026-01-24 02:38:05,247 | INFO     | traces error code: 0
[2026-01-23 21:38:08] 2026-01-24 02:38:05,248 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-23 21:38:08] 2026-01-24 02:38:08,789 | INFO     | PID=40728 has CPU usage=2.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-23 21:38:08] 2026-01-24 02:38:08,789 | INFO     | found 0 job(s) in 20 queues
[2026-01-23 21:38:08] 2026-01-24 02:38:08,790 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-23 21:38:08] 2026-01-24 02:38:08,790 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-23 21:38:08] 2026-01-24 02:38:08,790 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-23 21:38:08] 2026-01-24 02:38:08,790 | INFO     | [monitor] control thread has ended
[2026-01-23 21:38:08] 2026-01-24 02:38:08,881 [wrapper] ==== pilot stdout END ====
[2026-01-23 21:38:08] 2026-01-24 02:38:08,883 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-23 21:38:08] 2026-01-24 02:38:08,885 [wrapper] pilotpid: 40728
[2026-01-23 21:38:08] 2026-01-24 02:38:08,887 [wrapper] Pilot exit status: 0
[2026-01-23 21:38:08] 2026-01-24 02:38:08,918 [wrapper] pandaids: 6978383865
[2026-01-23 21:38:08] 2026-01-24 02:38:08,935 [wrapper] cleanup supervisor_pilot   50406 40729
[2026-01-23 21:38:08] 2026-01-24 02:38:08,938 [wrapper] Test setup, not cleaning
[2026-01-23 21:38:08] 2026-01-24 02:38:08,939 [wrapper] apfmon messages muted
[2026-01-23 21:38:08] 2026-01-24 02:38:08,942 [wrapper] ==== wrapper stdout END ====
[2026-01-23 21:38:08] 2026-01-24 02:38:08,944 [wrapper] ==== wrapper stderr END ====
[2026-01-23 21:38:08]  *** Error codes and diagnostics ***
[2026-01-23 21:38:08]     "exeErrorCode": 0,
[2026-01-23 21:38:08]     "exeErrorDiag": "",
[2026-01-23 21:38:08]     "pilotErrorCode": 0,
[2026-01-23 21:38:08]     "pilotErrorDiag": "",
[2026-01-23 21:38:08]  *** Listing of results directory ***
[2026-01-23 21:38:08] total 669980
[2026-01-23 21:38:08] -rw-r--r--. 1 boinc boinc    584422 Jan 23 04:46 pilot3.tar.gz
[2026-01-23 21:38:08] -rwx------. 1 boinc boinc     36322 Jan 23 04:49 runpilot2-wrapper.sh
[2026-01-23 21:38:08] -rw-r--r--. 1 boinc boinc      5111 Jan 23 04:52 queuedata.json
[2026-01-23 21:38:08] -rw-r--r--. 1 boinc boinc       100 Jan 23 18:37 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-23 21:38:08] -rwxr-xr-x. 1 boinc boinc      7986 Jan 23 18:37 run_atlas
[2026-01-23 21:38:08] -rw-r--r--. 1 boinc boinc       105 Jan 23 18:37 job.xml
[2026-01-23 21:38:08] -rw-r--r--. 2 boinc boinc 493656882 Jan 23 18:37 EVNT.48310824._000001.pool.root.1
[2026-01-23 21:38:08] drwxrwx--x. 2 boinc boinc      4096 Jan 23 18:37 shared
[2026-01-23 21:38:08] -rw-r--r--. 2 boinc boinc    597747 Jan 23 18:37 input.tar.gz
[2026-01-23 21:38:08] -rw-r--r--. 2 boinc boinc     15845 Jan 23 18:37 start_atlas.sh
[2026-01-23 21:38:08] -rw-r--r--. 1 boinc boinc         0 Jan 23 18:37 boinc_setup_complete
[2026-01-23 21:38:08] -rw-r--r--. 1 boinc boinc      6284 Jan 23 18:37 init_data.xml
[2026-01-23 21:38:08] -rw-r--r--. 1 boinc boinc         0 Jan 23 18:37 boinc_lockfile
[2026-01-23 21:38:08] -rw-r--r--. 1 boinc boinc      2522 Jan 23 18:38 pandaJob.out
[2026-01-23 21:38:08] -rw-------. 1 boinc boinc   1004230 Jan 23 18:38 agis_schedconf.cvmfs.json
[2026-01-23 21:38:08] -rw-------. 1 boinc boinc   1516246 Jan 23 18:38 agis_ddmendpoints.agis.ALL.json
[2026-01-23 21:38:08] -rw-------. 1 boinc boinc       424 Jan 23 18:38 workernode_map.json
[2026-01-23 21:38:08] drwx------. 5 boinc boinc      4096 Jan 23 18:38 pilot3
[2026-01-23 21:38:08] -rw-r--r--. 1 boinc boinc       531 Jan 23 21:37 boinc_task_state.xml
[2026-01-23 21:38:08] -rw-------. 1 boinc boinc 184716913 Jan 23 21:37 HITS.48310826._000235.pool.root.1
[2026-01-23 21:38:08] -rw-------. 1 boinc boinc      1019 Jan 23 21:37 memory_monitor_summary.json
[2026-01-23 21:38:08] -rw-------. 1 boinc boinc    373532 Jan 23 21:37 log.48310826._000235.job.log.tgz.1
[2026-01-23 21:38:08] -rw-------. 1 boinc boinc      6316 Jan 23 21:37 heartbeat.json
[2026-01-23 21:38:08] -rw-r--r--. 1 boinc boinc        28 Jan 23 21:38 wrapper_checkpoint.txt
[2026-01-23 21:38:08] -rw-r--r--. 1 boinc boinc      8192 Jan 23 21:38 boinc_mmap_file
[2026-01-23 21:38:08] -rw-------. 1 boinc boinc       745 Jan 23 21:38 pilotlog.txt
[2026-01-23 21:38:08] -rw-------. 1 boinc boinc        95 Jan 23 21:38 pilot_heartbeat.json
[2026-01-23 21:38:08] -rw-------. 1 boinc boinc   1498741 Jan 23 21:38 log.48310826._000235.job.log.1
[2026-01-23 21:38:08] -rw-------. 1 boinc boinc       357 Jan 23 21:38 output.list
[2026-01-23 21:38:08] -rw-r--r--. 1 boinc boinc       620 Jan 23 21:38 runtime_log
[2026-01-23 21:38:08] -rw-------. 1 boinc boinc   1894400 Jan 23 21:38 result.tar.gz
[2026-01-23 21:38:08] -rw-r--r--. 1 boinc boinc      8772 Jan 23 21:38 runtime_log.err
[2026-01-23 21:38:08] -rw-------. 1 boinc boinc       648 Jan 23 21:38 0uRMDm8xS38nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm2S2KDmxwJ4Wn.diag
[2026-01-23 21:38:08] -rw-r--r--. 1 boinc boinc     21305 Jan 23 21:38 stderr.txt
[2026-01-23 21:38:09] HITS file was successfully produced:
[2026-01-23 21:38:09] -rw-------. 1 boinc boinc 184716913 Jan 23 21:37 shared/HITS.pool.root.1
[2026-01-23 21:38:09]  *** Contents of shared directory: ***
[2026-01-23 21:38:09] total 664936
[2026-01-23 21:38:09] -rw-r--r--. 2 boinc boinc 493656882 Jan 23 18:37 ATLAS.root_0
[2026-01-23 21:38:09] -rw-r--r--. 2 boinc boinc    597747 Jan 23 18:37 input.tar.gz
[2026-01-23 21:38:09] -rw-r--r--. 2 boinc boinc     15845 Jan 23 18:37 start_atlas.sh
[2026-01-23 21:38:09] -rw-------. 1 boinc boinc 184716913 Jan 23 21:37 HITS.pool.root.1
[2026-01-23 21:38:09] -rw-------. 1 boinc boinc   1894400 Jan 23 21:38 result.tar.gz
21:38:10 (36471): run_atlas exited; CPU time 41264.957872
21:38:10 (36471): called boinc_finish(0)

</stderr_txt>
]]>

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