Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
08:58:02 (31373): wrapper (7.7.26015): starting
08:58:02 (31373): wrapper: running run_atlas (--nthreads 8)
[2026-01-23 08:58:02] Arguments: --nthreads 8
[2026-01-23 08:58:02] Threads: 8
[2026-01-23 08:58:02] Checking for CVMFS
[2026-01-23 08:58:02] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-23 08:58:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-23 08:58:03] Running cvmfs_config stat atlas.cern.ch
[2026-01-23 08:58:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-23 08:58:03] 2.11.2.0 24877 201293 139708 155435 1 50 10741364 18432000 1009 130560 0 134954163 99.981 7565542 29931 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-23 08:58:03] CVMFS is ok
[2026-01-23 08:58:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-23 08:58:03] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-23 08:58:03] Further information can be found at the LHC@home message board.
[2026-01-23 08:58:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-23 08:58:03] Checking for apptainer binary...
[2026-01-23 08:58:03] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-23 08:58:03] Running /usr/bin/apptainer --version
[2026-01-23 08:58:03] apptainer version 1.3.2-1.el7
[2026-01-23 08:58:03] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-23 08:58:04] c-206-3.aglt2.org
[2026-01-23 08:58:04] apptainer works
[2026-01-23 08:58:04] Set ATHENA_PROC_NUMBER=8
[2026-01-23 08:58:04] Set ATHENA_CORE_NUMBER=8
[2026-01-23 08:58:04] Starting ATLAS job with PandaID=6978383864
[2026-01-23 08:58:04] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-23 11:41:38]  *** The last 200 lines of the pilot log: ***
[2026-01-23 11:41:38] 2026-01-23 16:40:49,046 | INFO     | mean x: 1769181566.5
[2026-01-23 11:41:38] 2026-01-23 16:40:49,046 | INFO     | mean y: 2446891.725
[2026-01-23 11:41:38] 2026-01-23 16:40:49,046 | INFO     | intersect: -14355692880.826387
[2026-01-23 11:41:38] 2026-01-23 16:40:49,046 | INFO     | chi2: 2.0283651078470317
[2026-01-23 11:41:38] 2026-01-23 16:40:49,047 | INFO     | sum of square deviations: 1154663510.0
[2026-01-23 11:41:38] 2026-01-23 16:40:49,047 | INFO     | sum of deviations: 20789895499.0
[2026-01-23 11:41:38] 2026-01-23 16:40:49,047 | INFO     | mean x: 1769181414.0
[2026-01-23 11:41:38] 2026-01-23 16:40:49,048 | INFO     | mean y: 2460374.7612903225
[2026-01-23 11:41:38] 2026-01-23 16:40:49,048 | INFO     | intersect: -31851925251.258064
[2026-01-23 11:41:38] 2026-01-23 16:40:49,048 | INFO     | chi2: 1.1617077581672046
[2026-01-23 11:41:38] 2026-01-23 16:40:49,048 | INFO     | current chi2=1.1617077581672046 (change=42.72689104772284 %)
[2026-01-23 11:41:38] 2026-01-23 16:40:49,048 | INFO     | sum of square deviations: 1046484737.5
[2026-01-23 11:41:38] 2026-01-23 16:40:49,049 | INFO     | sum of deviations: 19984014556.0
[2026-01-23 11:41:38] 2026-01-23 16:40:49,049 | INFO     | mean x: 1769181261.5
[2026-01-23 11:41:38] 2026-01-23 16:40:49,049 | INFO     | mean y: 2459238.3066666666
[2026-01-23 11:41:38] 2026-01-23 16:40:49,049 | INFO     | intersect: -33782404329.298344
[2026-01-23 11:41:38] 2026-01-23 16:40:49,050 | INFO     | chi2: 1.162487417191974
[2026-01-23 11:41:38] 2026-01-23 16:40:49,050 | INFO     | current chi2=1.162487417191974 (change=-0.06711318051274212 %)
[2026-01-23 11:41:38] 2026-01-23 16:40:49,050 | INFO     | right removable region: 149
[2026-01-23 11:41:38] 2026-01-23 16:40:49,050 | INFO     | sum of square deviations: 1154663510.0
[2026-01-23 11:41:38] 2026-01-23 16:40:49,051 | INFO     | sum of deviations: -9733283159.0
[2026-01-23 11:41:38] 2026-01-23 16:40:49,051 | INFO     | mean x: 1769181719.0
[2026-01-23 11:41:38] 2026-01-23 16:40:49,051 | INFO     | mean y: 2473016.9741935483
[2026-01-23 11:41:38] 2026-01-23 16:40:49,051 | INFO     | intersect: 14915862486.390589
[2026-01-23 11:41:38] 2026-01-23 16:40:49,051 | INFO     | chi2: 0.8922710336425269
[2026-01-23 11:41:38] 2026-01-23 16:40:49,052 | INFO     | current chi2=0.8922710336425269 (change=56.010334126206175 %)
[2026-01-23 11:41:38] 2026-01-23 16:40:49,052 | INFO     | sum of square deviations: 1046484737.5
[2026-01-23 11:41:38] 2026-01-23 16:40:49,052 | INFO     | sum of deviations: -9171429178.0
[2026-01-23 11:41:38] 2026-01-23 16:40:49,053 | INFO     | mean x: 1769181871.5
[2026-01-23 11:41:38] 2026-01-23 16:40:49,053 | INFO     | mean y: 2472211.7066666665
[2026-01-23 11:41:38] 2026-01-23 16:40:49,053 | INFO     | intersect: 15507644581.660841
[2026-01-23 11:41:38] 2026-01-23 16:40:49,053 | INFO     | chi2: 0.8924061230000403
[2026-01-23 11:41:38] 2026-01-23 16:40:49,053 | INFO     | current chi2=0.8924061230000403 (change=-0.015139946543138164 %)
[2026-01-23 11:41:38] 2026-01-23 16:40:49,053 | INFO     | left removable region: 20
[2026-01-23 11:41:38] 2026-01-23 16:40:49,053 | INFO     | sum of square deviations: 665612480.0
[2026-01-23 11:41:38] 2026-01-23 16:40:49,054 | INFO     | sum of deviations: 1845407014.0000005
[2026-01-23 11:41:38] 2026-01-23 16:40:49,054 | INFO     | mean x: 1769181841.0
[2026-01-23 11:41:38] 2026-01-23 16:40:49,054 | INFO     | mean y: 2485795.5426356588
[2026-01-23 11:41:38] 2026-01-23 16:40:49,054 | INFO     | intersect: -4902561325.00239
[2026-01-23 11:41:38] 2026-01-23 16:40:49,055 | INFO     | chi2: 0.00021958952114697682
[2026-01-23 11:41:38] 2026-01-23 16:40:49,055 | INFO     | current memory leak: 2.77 B/s (using 129 data points, chi2=0.00)
[2026-01-23 11:41:38] 2026-01-23 16:40:49,055 | INFO     | could have reported an average CPU frequency of 2134 MHz (9 samples)
[2026-01-23 11:41:38] 2026-01-23 16:40:49,055 | INFO     | ..............................
[2026-01-23 11:41:38] 2026-01-23 16:40:49,055 | INFO     | . Timing measurements:
[2026-01-23 11:41:38] 2026-01-23 16:40:49,055 | INFO     | . get job = 0 s
[2026-01-23 11:41:38] 2026-01-23 16:40:49,055 | INFO     | . initial setup = 5 s
[2026-01-23 11:41:38] 2026-01-23 16:40:49,056 | INFO     | . payload setup = 4 s
[2026-01-23 11:41:38] 2026-01-23 16:40:49,056 | INFO     | . stage-in = 0 s
[2026-01-23 11:41:38] 2026-01-23 16:40:49,056 | INFO     | . payload execution = 9728 s
[2026-01-23 11:41:38] 2026-01-23 16:40:49,056 | INFO     | . stage-out = 0 s
[2026-01-23 11:41:38] 2026-01-23 16:40:49,056 | INFO     | . log creation = 0 s
[2026-01-23 11:41:38] 2026-01-23 16:40:49,056 | INFO     | ..............................
[2026-01-23 11:41:38] 2026-01-23 16:40:49,359 | INFO     | 
[2026-01-23 11:41:38] 2026-01-23 16:40:49,359 | INFO     | job summary report
[2026-01-23 11:41:38] 2026-01-23 16:40:49,359 | INFO     | --------------------------------------------------
[2026-01-23 11:41:38] 2026-01-23 16:40:49,360 | INFO     | PanDA job id: 6978383864
[2026-01-23 11:41:38] 2026-01-23 16:40:49,360 | INFO     | task id: 48310826
[2026-01-23 11:41:38] 2026-01-23 16:40:49,360 | INFO     | errors: (none)
[2026-01-23 11:41:38] 2026-01-23 16:40:49,360 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-23 11:41:38] 2026-01-23 16:40:49,360 | INFO     | pilot state: finished 
[2026-01-23 11:41:38] 2026-01-23 16:40:49,360 | INFO     | transexitcode: 0
[2026-01-23 11:41:38] 2026-01-23 16:40:49,361 | INFO     | exeerrorcode: 0
[2026-01-23 11:41:38] 2026-01-23 16:40:49,361 | INFO     | exeerrordiag: 
[2026-01-23 11:41:38] 2026-01-23 16:40:49,361 | INFO     | exitcode: 0
[2026-01-23 11:41:38] 2026-01-23 16:40:49,361 | INFO     | exitmsg: OK
[2026-01-23 11:41:38] 2026-01-23 16:40:49,361 | INFO     | cpuconsumptiontime: 72156 s
[2026-01-23 11:41:38] 2026-01-23 16:40:49,361 | INFO     | nevents: 400
[2026-01-23 11:41:38] 2026-01-23 16:40:49,362 | INFO     | neventsw: 0
[2026-01-23 11:41:38] 2026-01-23 16:40:49,362 | INFO     | pid: 7524
[2026-01-23 11:41:38] 2026-01-23 16:40:49,362 | INFO     | pgrp: 7524
[2026-01-23 11:41:38] 2026-01-23 16:40:49,362 | INFO     | corecount: 8
[2026-01-23 11:41:38] 2026-01-23 16:40:49,362 | INFO     | event service: False
[2026-01-23 11:41:38] 2026-01-23 16:40:49,363 | INFO     | sizes: {0: 2284031, 1: 2284265, 11: 2284265, 9736: 2312830, 9737: 2321828, 9740: 2322270}
[2026-01-23 11:41:38] 2026-01-23 16:40:49,363 | INFO     | --------------------------------------------------
[2026-01-23 11:41:38] 2026-01-23 16:40:49,363 | INFO     | 
[2026-01-23 11:41:38] 2026-01-23 16:40:49,364 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-01-23 11:41:38] 2026-01-23 16:40:49,384 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-23 11:41:38] 2026-01-23 16:40:49,385 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-23 11:41:38] 2026-01-23 16:40:49,385 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-23 11:41:38] 2026-01-23 16:40:49,385 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-23 11:41:38] 2026-01-23 16:40:49,385 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-23 11:41:38] 2026-01-23 16:40:49,385 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-23 11:41:38] 2026-01-23 16:40:49,385 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-23 11:41:38] 2026-01-23 16:40:49,386 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-23 11:41:38] 2026-01-23 16:40:49,386 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-23 11:41:38] 2026-01-23 16:40:49,386 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-23 11:41:38] 2026-01-23 16:40:49,386 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-23 11:41:38] 2026-01-23 16:40:49,386 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-23 11:41:38] 2026-01-23 16:40:49,386 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-23 11:41:38] 2026-01-23 16:40:49,387 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-23 11:41:38] 2026-01-23 16:40:49,387 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-23 11:41:38] 2026-01-23 16:40:49,387 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-23 11:41:38] 2026-01-23 16:40:49,387 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-23 11:41:38] 2026-01-23 16:40:49,387 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-23 11:41:38] 2026-01-23 16:40:49,387 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-23 11:41:38] 2026-01-23 16:40:49,387 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-23 11:41:38] 2026-01-23 16:40:49,388 | INFO     | job 6978383864 has completed (purged errors)
[2026-01-23 11:41:38] 2026-01-23 16:40:49,388 | INFO     | overall cleanup function is called
[2026-01-23 11:41:38] 2026-01-23 16:40:50,395 | INFO     | --- collectZombieJob: --- 10, [7524]
[2026-01-23 11:41:38] 2026-01-23 16:40:50,396 | INFO     | zombie collector waiting for pid 7524
[2026-01-23 11:41:38] 2026-01-23 16:40:50,396 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-23 11:41:38] 2026-01-23 16:40:50,396 | INFO     | collected zombie processes
[2026-01-23 11:41:38] 2026-01-23 16:40:50,397 | INFO     | will attempt to kill all subprocesses of pid=7524
[2026-01-23 11:41:38] 2026-01-23 16:40:50,442 | WARNING  | process 7524 can no longer be monitored (due to stat problems) - aborting
[2026-01-23 11:41:38] 2026-01-23 16:40:50,692 | INFO     | using path: /tmp/boinchome/slots/2/memory_monitor_summary.json (trf name=prmon)
[2026-01-23 11:41:38] 2026-01-23 16:40:50,694 | INFO     | using path: /tmp/boinchome/slots/2/memory_monitor_summary.json (trf name=prmon)
[2026-01-23 11:41:38] 2026-01-23 16:40:50,694 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-01-23 11:41:38] 2026-01-23 16:40:50,695 | WARNING  | maxPSS not found in memory monitor output
[2026-01-23 11:41:38] 2026-01-23 16:40:50,696 | INFO     | skipping file size check of payload stdout file (/tmp/boinchome/slots/2/PanDA_Pilot-6978383864/payload.stdout) since it has not been created yet
[2026-01-23 11:41:38] 2026-01-23 16:40:50,696 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-01-23 11:41:38] 2026-01-23 16:40:50,710 | INFO     | process IDs to be killed: [7524] (in reverse order)
[2026-01-23 11:41:38] 2026-01-23 16:40:50,716 | INFO     | sufficient remaining disk space (26573012992 B)
[2026-01-23 11:41:38] 2026-01-23 16:40:50,717 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-01-23 11:41:38] 2026-01-23 16:40:50,717 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/2/PanDA_Pilot-6978383864/HITS.48310826._000234.pool.root.1 since it does not exist
[2026-01-23 11:41:38] 2026-01-23 16:40:50,767 | WARNING  | found no corresponding commands to process id(s)
[2026-01-23 11:41:38] 2026-01-23 16:40:50,767 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-23 11:41:38] 2026-01-23 16:40:50,787 | INFO     | did not find any defunct processes belonging to 7524
[2026-01-23 11:41:38] 2026-01-23 16:40:50,805 | INFO     | did not find any defunct processes belonging to 7524
[2026-01-23 11:41:38] 2026-01-23 16:40:50,805 | INFO     | ready for new job
[2026-01-23 11:41:38] 2026-01-23 16:40:50,805 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-23 11:41:38] 2026-01-23 16:40:50,807 | INFO     | **************************************
[2026-01-23 11:41:38] 2026-01-23 16:40:50,807 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-23 11:41:38] 2026-01-23 16:40:50,807 | INFO     | **************************************
[2026-01-23 11:41:38] 2026-01-23 16:40:50,808 | INFO     | 
[2026-01-23 11:41:38] 2026-01-23 16:40:50,809 | INFO     | architecture information:
[2026-01-23 11:41:38] 2026-01-23 16:40:50,809 | INFO     | executing command: cat /etc/os-release
[2026-01-23 11:41:38] 2026-01-23 16:40:50,823 | INFO     | cat /etc/os-release:
[2026-01-23 11:41:38] NAME="CentOS Linux"
[2026-01-23 11:41:38] VERSION="7 (Core)"
[2026-01-23 11:41:38] ID="centos"
[2026-01-23 11:41:38] ID_LIKE="rhel fedora"
[2026-01-23 11:41:38] VERSION_ID="7"
[2026-01-23 11:41:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-23 11:41:38] ANSI_COLOR="0;31"
[2026-01-23 11:41:38] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-23 11:41:38] HOME_URL="https://www.centos.org/"
[2026-01-23 11:41:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-23 11:41:38] 
[2026-01-23 11:41:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-23 11:41:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-23 11:41:38] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-23 11:41:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-23 11:41:38] 
[2026-01-23 11:41:38] 2026-01-23 16:40:50,824 | INFO     | **************************************
[2026-01-23 11:41:38] 2026-01-23 16:40:50,876 | INFO     | number of running child processes to parent process 7524: 1
[2026-01-23 11:41:38] 2026-01-23 16:40:50,876 | INFO     | maximum number of monitored processes: 6
[2026-01-23 11:41:38] 2026-01-23 16:40:50,876 | INFO     | aborting job monitoring since job object (job id=6978383864) has expired
[2026-01-23 11:41:38] 2026-01-23 16:40:51,326 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-01-23 11:41:38] 2026-01-23 16:40:51,351 | INFO     | sufficient remaining disk space (26574061568 B)
[2026-01-23 11:41:38] 2026-01-23 16:40:51,352 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-23 11:41:38] 2026-01-23 16:40:51,352 | INFO     | current server update state: UPDATING_FINAL
[2026-01-23 11:41:38] 2026-01-23 16:40:51,352 | INFO     | update_server=False
[2026-01-23 11:41:38] 2026-01-23 16:40:51,352 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-23 11:41:38] 2026-01-23 16:40:51,353 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-23 11:41:38] 2026-01-23 16:40:51,353 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-23 11:41:38] 2026-01-23 16:40:51,354 | INFO     | will abort loop
[2026-01-23 11:41:38] 2026-01-23 16:40:51,622 | INFO     | all data control threads have been joined
[2026-01-23 11:41:38] 2026-01-23 16:40:51,778 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-23 11:41:38] 2026-01-23 16:40:51,877 | INFO     | all payload control threads have been joined
[2026-01-23 11:41:38] 2026-01-23 16:40:51,968 | INFO     | all job control threads have been joined
[2026-01-23 11:41:38] 2026-01-23 16:40:52,357 | INFO     | [job] retrieve thread has finished
[2026-01-23 11:41:38] 2026-01-23 16:40:52,360 | INFO     | [job] job monitor thread has finished
[2026-01-23 11:41:38] 2026-01-23 16:40:52,537 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-23 11:41:38] 2026-01-23 16:40:52,628 | INFO     | [data] control thread has finished
[2026-01-23 11:41:38] 2026-01-23 16:40:52,730 | INFO     | [payload] validate_post thread has finished
[2026-01-23 11:41:38] 2026-01-23 16:40:52,883 | INFO     | [payload] control thread has finished
[2026-01-23 11:41:38] 2026-01-23 16:40:52,973 | INFO     | [job] control thread has finished
[2026-01-23 11:41:38] 2026-01-23 16:40:53,058 | INFO     | [job] validate thread has finished
[2026-01-23 11:41:38] 2026-01-23 16:40:53,122 | INFO     | [job] create_data_payload thread has finished
[2026-01-23 11:41:38] 2026-01-23 16:40:53,482 | INFO     | [payload] validate_pre thread has finished
[2026-01-23 11:41:38] 2026-01-23 16:40:53,498 | INFO     | [data] copytool_in thread has finished
[2026-01-23 11:41:38] 2026-01-23 16:40:53,599 | INFO     | [payload] execute_payloads thread has finished
[2026-01-23 11:41:38] 2026-01-23 16:40:53,658 | INFO     | [payload] failed_post thread has finished
[2026-01-23 11:41:38] 2026-01-23 16:40:53,784 | INFO     | [data] copytool_out thread has finished
[2026-01-23 11:41:38] 2026-01-23 16:40:54,139 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-23 11:41:38] 2026-01-23 16:40:55,144 | INFO     | [job] queue monitor thread has finished
[2026-01-23 11:41:38] 2026-01-23 16:40:55,359 | INFO     | [data] queue_monitor thread has finished
[2026-01-23 11:41:38] 2026-01-23 16:41:20,956 | INFO     | PID=3117 has CPU usage=5.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-23 11:41:38] 2026-01-23 16:41:20,956 | INFO     | .. there are 3 such processes running
[2026-01-23 11:41:38] 2026-01-23 16:41:20,956 | INFO     | found 0 job(s) in 20 queues
[2026-01-23 11:41:38] 2026-01-23 16:41:20,956 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-23 11:41:38] 2026-01-23 16:41:20,956 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-23 11:41:38] 2026-01-23 16:41:32,923 | INFO     | [monitor] cgroup control has ended
[2026-01-23 11:41:38] 2026-01-23 16:41:33,604 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139877461305152)>', '<ExcThread(monitor, started 139876724885248)>']
[2026-01-23 11:41:38] 2026-01-23 16:41:34,018 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-23 11:41:38] 2026-01-23 16:41:34,018 | INFO     | [monitor] control thread has ended
[2026-01-23 11:41:38] 2026-01-23 16:41:38,623 | INFO     | all workflow threads have been joined
[2026-01-23 11:41:38] 2026-01-23 16:41:38,623 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-23 11:41:38] 2026-01-23 16:41:38,623 | INFO     | traces error code: 0
[2026-01-23 11:41:38] 2026-01-23 16:41:38,624 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-23 11:41:38] 2026-01-23 16:41:38,721 [wrapper] ==== pilot stdout END ====
[2026-01-23 11:41:38] 2026-01-23 16:41:38,723 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-23 11:41:38] 2026-01-23 16:41:38,726 [wrapper] pilotpid: 3117
[2026-01-23 11:41:38] 2026-01-23 16:41:38,728 [wrapper] Pilot exit status: 0
[2026-01-23 11:41:38] 2026-01-23 16:41:38,738 [wrapper] pandaids: 6978383864
[2026-01-23 11:41:38] 2026-01-23 16:41:38,775 [wrapper] cleanup supervisor_pilot 10045 3118
[2026-01-23 11:41:38] 2026-01-23 16:41:38,777 [wrapper] Test setup, not cleaning
[2026-01-23 11:41:38] 2026-01-23 16:41:38,780 [wrapper] apfmon messages muted
[2026-01-23 11:41:38] 2026-01-23 16:41:38,782 [wrapper] ==== wrapper stdout END ====
[2026-01-23 11:41:38] 2026-01-23 16:41:38,784 [wrapper] ==== wrapper stderr END ====
[2026-01-23 11:41:38]  *** Error codes and diagnostics ***
[2026-01-23 11:41:38]     "exeErrorCode": 0,
[2026-01-23 11:41:38]     "exeErrorDiag": "",
[2026-01-23 11:41:38]     "pilotErrorCode": 0,
[2026-01-23 11:41:38]     "pilotErrorDiag": "",
[2026-01-23 11:41:38]  *** Listing of results directory ***
[2026-01-23 11:41:38] total 664116
[2026-01-23 11:41:38] -rw-r--r-- 1 boincer umatlas    584422 Jan 23 04:46 pilot3.tar.gz
[2026-01-23 11:41:38] -rwx------ 1 boincer umatlas     36322 Jan 23 04:49 runpilot2-wrapper.sh
[2026-01-23 11:41:38] -rw-r--r-- 1 boincer umatlas      5111 Jan 23 04:52 queuedata.json
[2026-01-23 11:41:38] -rw-r--r-- 1 boincer umatlas       100 Jan 23 08:58 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-23 11:41:38] -rwxr-xr-x 1 boincer umatlas      7986 Jan 23 08:58 run_atlas
[2026-01-23 11:41:38] -rw-r--r-- 1 boincer umatlas       105 Jan 23 08:58 job.xml
[2026-01-23 11:41:38] -rw-r--r-- 2 boincer umatlas 493656882 Jan 23 08:58 EVNT.48310824._000001.pool.root.1
[2026-01-23 11:41:38] -rw-r--r-- 2 boincer umatlas     15845 Jan 23 08:58 start_atlas.sh
[2026-01-23 11:41:38] drwxrwx--x 2 boincer umatlas      4096 Jan 23 08:58 shared
[2026-01-23 11:41:38] -rw-r--r-- 2 boincer umatlas    597745 Jan 23 08:58 input.tar.gz
[2026-01-23 11:41:38] -rw-r--r-- 1 boincer umatlas         0 Jan 23 08:58 boinc_lockfile
[2026-01-23 11:41:38] -rw-r--r-- 1 boincer umatlas      2522 Jan 23 08:58 pandaJob.out
[2026-01-23 11:41:38] -rw------- 1 boincer umatlas        57 Jan 23 08:58 setup.sh.local
[2026-01-23 11:41:38] -rw------- 1 boincer umatlas   1004230 Jan 23 08:58 agis_schedconf.cvmfs.json
[2026-01-23 11:41:38] -rw------- 1 boincer umatlas   1516246 Jan 23 08:58 agis_ddmendpoints.agis.ALL.json
[2026-01-23 11:41:38] -rw------- 1 boincer umatlas       432 Jan 23 08:58 workernode_map.json
[2026-01-23 11:41:38] drwx------ 5 boincer umatlas      4096 Jan 23 08:58 pilot3
[2026-01-23 11:41:38] -rw-r--r-- 1 boincer umatlas      5950 Jan 23 11:37 init_data.xml
[2026-01-23 11:41:38] -rw------- 1 boincer umatlas 178849600 Jan 23 11:40 HITS.48310826._000234.pool.root.1
[2026-01-23 11:41:38] -rw-r--r-- 1 boincer umatlas       530 Jan 23 11:40 boinc_task_state.xml
[2026-01-23 11:41:38] -rw------- 1 boincer umatlas        95 Jan 23 11:40 pilot_heartbeat.json
[2026-01-23 11:41:38] -rw------- 1 boincer umatlas      1053 Jan 23 11:40 memory_monitor_summary.json
[2026-01-23 11:41:38] -rw------- 1 boincer umatlas    424237 Jan 23 11:40 log.48310826._000234.job.log.tgz.1
[2026-01-23 11:41:38] -rw------- 1 boincer umatlas      6401 Jan 23 11:40 heartbeat.json
[2026-01-23 11:41:38] -rw-r--r-- 1 boincer umatlas        27 Jan 23 11:41 wrapper_checkpoint.txt
[2026-01-23 11:41:38] -rw-r--r-- 1 boincer umatlas      8192 Jan 23 11:41 boinc_mmap_file
[2026-01-23 11:41:38] -rw------- 1 boincer umatlas      5103 Jan 23 11:41 pilotlog.txt
[2026-01-23 11:41:38] -rw------- 1 boincer umatlas   1379892 Jan 23 11:41 log.48310826._000234.job.log.1
[2026-01-23 11:41:38] -rw------- 1 boincer umatlas       357 Jan 23 11:41 output.list
[2026-01-23 11:41:38] -rw-r--r-- 1 boincer umatlas       620 Jan 23 11:41 runtime_log
[2026-01-23 11:41:38] -rw------- 1 boincer umatlas   1822720 Jan 23 11:41 result.tar.gz
[2026-01-23 11:41:38] -rw-r--r-- 1 boincer umatlas      9336 Jan 23 11:41 runtime_log.err
[2026-01-23 11:41:38] -rw------- 1 boincer umatlas       657 Jan 23 11:41 epQMDm8xS38nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm1S2KDm66sRPo.diag
[2026-01-23 11:41:38] -rw-r--r-- 1 boincer umatlas     21367 Jan 23 11:41 stderr.txt
[2026-01-23 11:41:38] HITS file was successfully produced:
[2026-01-23 11:41:38] -rw------- 1 boincer umatlas 178849600 Jan 23 11:40 shared/HITS.pool.root.1
[2026-01-23 11:41:38]  *** Contents of shared directory: ***
[2026-01-23 11:41:38] total 659132
[2026-01-23 11:41:38] -rw-r--r-- 2 boincer umatlas 493656882 Jan 23 08:58 ATLAS.root_0
[2026-01-23 11:41:38] -rw-r--r-- 2 boincer umatlas     15845 Jan 23 08:58 start_atlas.sh
[2026-01-23 11:41:38] -rw-r--r-- 2 boincer umatlas    597745 Jan 23 08:58 input.tar.gz
[2026-01-23 11:41:38] -rw------- 1 boincer umatlas 178849600 Jan 23 11:40 HITS.pool.root.1
[2026-01-23 11:41:38] -rw------- 1 boincer umatlas   1822720 Jan 23 11:41 result.tar.gz
11:41:40 (31373): run_atlas exited; CPU time 72284.069798
11:41:40 (31373): called boinc_finish(0)

</stderr_txt>
]]>

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