Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
08:25:54 (22265): wrapper (7.7.26015): starting
08:25:54 (22265): wrapper: running run_atlas (--nthreads 8)
[2026-01-23 08:25:54] Arguments: --nthreads 8
[2026-01-23 08:25:54] Threads: 8
[2026-01-23 08:25:54] Checking for CVMFS
[2026-01-23 08:25:54] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-23 08:25:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-23 08:25:55] Running cvmfs_config stat atlas.cern.ch
[2026-01-23 08:25:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-23 08:25:55] 2.11.2.0 17210 201244 144352 155431 1 52 13250303 18432000 1833 130560 0 134985178 99.981 7708043 29144 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-23 08:25:55] CVMFS is ok
[2026-01-23 08:25:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-23 08:25:55] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-23 08:25:55] Further information can be found at the LHC@home message board.
[2026-01-23 08:25:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-23 08:25:55] Checking for apptainer binary...
[2026-01-23 08:25:55] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-23 08:25:55] Running /usr/bin/apptainer --version
[2026-01-23 08:25:55] apptainer version 1.3.2-1.el7
[2026-01-23 08:25:55] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-23 08:25:56] c-206-14.aglt2.org
[2026-01-23 08:25:56] apptainer works
[2026-01-23 08:25:56] Set ATHENA_PROC_NUMBER=8
[2026-01-23 08:25:56] Set ATHENA_CORE_NUMBER=8
[2026-01-23 08:25:56] Starting ATLAS job with PandaID=6978384635
[2026-01-23 08:25:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-23 11:12:32]  *** The last 200 lines of the pilot log: ***
[2026-01-23 11:12:32] 2026-01-23 16:11:48,360 | INFO     | intersect: -31517382509.77043
[2026-01-23 11:12:32] 2026-01-23 16:11:48,361 | INFO     | chi2: 1.33925058894477
[2026-01-23 11:12:32] 2026-01-23 16:11:48,361 | INFO     | sum of square deviations: 1223016419.5
[2026-01-23 11:12:32] 2026-01-23 16:11:48,362 | INFO     | sum of deviations: 22828098259.0
[2026-01-23 11:12:32] 2026-01-23 16:11:48,363 | INFO     | mean x: 1769179570.5
[2026-01-23 11:12:32] 2026-01-23 16:11:48,363 | INFO     | mean y: 2463611.4556962023
[2026-01-23 11:12:32] 2026-01-23 16:11:48,363 | INFO     | intersect: -33019991712.32536
[2026-01-23 11:12:32] 2026-01-23 16:11:48,363 | INFO     | chi2: 1.3404235091196304
[2026-01-23 11:12:32] 2026-01-23 16:11:48,364 | INFO     | current chi2=1.3404235091196304 (change=-0.08758033668550821 %)
[2026-01-23 11:12:32] 2026-01-23 16:11:48,364 | INFO     | right removable region: 157
[2026-01-23 11:12:32] 2026-01-23 16:11:48,364 | INFO     | sum of square deviations: 1223016419.5
[2026-01-23 11:12:32] 2026-01-23 16:11:48,365 | INFO     | sum of deviations: 1581011725.0000002
[2026-01-23 11:12:32] 2026-01-23 16:11:48,366 | INFO     | mean x: 1769179875.5
[2026-01-23 11:12:32] 2026-01-23 16:11:48,366 | INFO     | mean y: 2493007.974683544
[2026-01-23 11:12:32] 2026-01-23 16:11:48,366 | INFO     | intersect: -2284552433.281995
[2026-01-23 11:12:32] 2026-01-23 16:11:48,366 | INFO     | chi2: 0.02763756493782523
[2026-01-23 11:12:32] 2026-01-23 16:11:48,367 | INFO     | current chi2=0.02763756493782523 (change=97.93634102788772 %)
[2026-01-23 11:12:32] 2026-01-23 16:11:48,367 | INFO     | sum of square deviations: 1110539892.0
[2026-01-23 11:12:32] 2026-01-23 16:11:48,368 | INFO     | sum of deviations: 3913722180.0
[2026-01-23 11:12:32] 2026-01-23 16:11:48,368 | INFO     | mean x: 1769180028.0
[2026-01-23 11:12:32] 2026-01-23 16:11:48,368 | INFO     | mean y: 2489839.777777778
[2026-01-23 11:12:32] 2026-01-23 16:11:48,369 | INFO     | intersect: -6232386697.189181
[2026-01-23 11:12:32] 2026-01-23 16:11:48,369 | INFO     | chi2: 0.0013050331242087034
[2026-01-23 11:12:32] 2026-01-23 16:11:48,369 | INFO     | current chi2=0.0013050331242087034 (change=95.2780459235661 %)
[2026-01-23 11:12:32] 2026-01-23 16:11:48,370 | INFO     | sum of square deviations: 1005179777.0
[2026-01-23 11:12:32] 2026-01-23 16:11:48,371 | INFO     | sum of deviations: 2769726350.0
[2026-01-23 11:12:32] 2026-01-23 16:11:48,371 | INFO     | mean x: 1769180180.5
[2026-01-23 11:12:32] 2026-01-23 16:11:48,371 | INFO     | mean y: 2491489.554054054
[2026-01-23 11:12:32] 2026-01-23 16:11:48,371 | INFO     | intersect: -4872402609.940555
[2026-01-23 11:12:32] 2026-01-23 16:11:48,372 | INFO     | chi2: 0.00019291115160783873
[2026-01-23 11:12:32] 2026-01-23 16:11:48,372 | INFO     | current chi2=0.00019291115160783873 (change=85.21791148214656 %)
[2026-01-23 11:12:32] 2026-01-23 16:11:48,372 | INFO     | sum of square deviations: 906703512.0
[2026-01-23 11:12:32] 2026-01-23 16:11:48,373 | INFO     | sum of deviations: 2331888785.0
[2026-01-23 11:12:32] 2026-01-23 16:11:48,374 | INFO     | mean x: 1769180333.0
[2026-01-23 11:12:32] 2026-01-23 16:11:48,374 | INFO     | mean y: 2492166.020979021
[2026-01-23 11:12:32] 2026-01-23 16:11:48,374 | INFO     | intersect: -4547541800.501548
[2026-01-23 11:12:32] 2026-01-23 16:11:48,374 | INFO     | chi2: 0.00013121750726392231
[2026-01-23 11:12:32] 2026-01-23 16:11:48,374 | INFO     | current chi2=0.00013121750726392231 (change=31.980341120626832 %)
[2026-01-23 11:12:32] 2026-01-23 16:11:48,375 | INFO     | sum of square deviations: 814878534.5
[2026-01-23 11:12:32] 2026-01-23 16:11:48,376 | INFO     | sum of deviations: 2090327473.5
[2026-01-23 11:12:32] 2026-01-23 16:11:48,376 | INFO     | mean x: 1769180485.5
[2026-01-23 11:12:32] 2026-01-23 16:11:48,376 | INFO     | mean y: 2492565.0362318843
[2026-01-23 11:12:32] 2026-01-23 16:11:48,377 | INFO     | intersect: -4535811510.785167
[2026-01-23 11:12:32] 2026-01-23 16:11:48,377 | INFO     | chi2: 0.00011922511996045693
[2026-01-23 11:12:32] 2026-01-23 16:11:48,377 | INFO     | current chi2=0.00011922511996045693 (change=9.139319556912998 %)
[2026-01-23 11:12:32] 2026-01-23 16:11:48,377 | INFO     | left removable region: 50
[2026-01-23 11:12:32] 2026-01-23 16:11:48,377 | INFO     | sum of square deviations: 379832238.0
[2026-01-23 11:12:32] 2026-01-23 16:11:48,378 | INFO     | sum of deviations: 931373132.0000002
[2026-01-23 11:12:32] 2026-01-23 16:11:48,378 | INFO     | mean x: 1769181065.0
[2026-01-23 11:12:32] 2026-01-23 16:11:48,378 | INFO     | mean y: 2493523.887850467
[2026-01-23 11:12:32] 2026-01-23 16:11:48,378 | INFO     | intersect: -4335652490.943428
[2026-01-23 11:12:32] 2026-01-23 16:11:48,378 | INFO     | chi2: 7.153076747946346e-05
[2026-01-23 11:12:32] 2026-01-23 16:11:48,378 | INFO     | current memory leak: 2.45 B/s (using 107 data points, chi2=0.00)
[2026-01-23 11:12:32] 2026-01-23 16:11:48,379 | INFO     | could have reported an average CPU frequency of 2477 MHz (9 samples)
[2026-01-23 11:12:32] 2026-01-23 16:11:48,379 | INFO     | ..............................
[2026-01-23 11:12:32] 2026-01-23 16:11:48,379 | INFO     | . Timing measurements:
[2026-01-23 11:12:32] 2026-01-23 16:11:48,379 | INFO     | . get job = 0 s
[2026-01-23 11:12:32] 2026-01-23 16:11:48,379 | INFO     | . initial setup = 6 s
[2026-01-23 11:12:32] 2026-01-23 16:11:48,379 | INFO     | . payload setup = 4 s
[2026-01-23 11:12:32] 2026-01-23 16:11:48,379 | INFO     | . stage-in = 0 s
[2026-01-23 11:12:32] 2026-01-23 16:11:48,380 | INFO     | . payload execution = 9923 s
[2026-01-23 11:12:32] 2026-01-23 16:11:48,380 | INFO     | . stage-out = 0 s
[2026-01-23 11:12:32] 2026-01-23 16:11:48,380 | INFO     | . log creation = 0 s
[2026-01-23 11:12:32] 2026-01-23 16:11:48,380 | INFO     | ..............................
[2026-01-23 11:12:32] 2026-01-23 16:11:48,482 | INFO     | 
[2026-01-23 11:12:32] 2026-01-23 16:11:48,482 | INFO     | job summary report
[2026-01-23 11:12:32] 2026-01-23 16:11:48,482 | INFO     | --------------------------------------------------
[2026-01-23 11:12:32] 2026-01-23 16:11:48,482 | INFO     | PanDA job id: 6978384635
[2026-01-23 11:12:32] 2026-01-23 16:11:48,482 | INFO     | task id: 48310826
[2026-01-23 11:12:32] 2026-01-23 16:11:48,483 | INFO     | errors: (none)
[2026-01-23 11:12:32] 2026-01-23 16:11:48,483 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-23 11:12:32] 2026-01-23 16:11:48,483 | INFO     | pilot state: finished 
[2026-01-23 11:12:32] 2026-01-23 16:11:48,483 | INFO     | transexitcode: 0
[2026-01-23 11:12:32] 2026-01-23 16:11:48,483 | INFO     | exeerrorcode: 0
[2026-01-23 11:12:32] 2026-01-23 16:11:48,483 | INFO     | exeerrordiag: 
[2026-01-23 11:12:32] 2026-01-23 16:11:48,484 | INFO     | exitcode: 0
[2026-01-23 11:12:32] 2026-01-23 16:11:48,484 | INFO     | exitmsg: OK
[2026-01-23 11:12:32] 2026-01-23 16:11:48,484 | INFO     | cpuconsumptiontime: 75338 s
[2026-01-23 11:12:32] 2026-01-23 16:11:48,484 | INFO     | nevents: 400
[2026-01-23 11:12:32] 2026-01-23 16:11:48,484 | INFO     | neventsw: 0
[2026-01-23 11:12:32] 2026-01-23 16:11:48,484 | INFO     | pid: 30677
[2026-01-23 11:12:32] 2026-01-23 16:11:48,485 | INFO     | pgrp: 30677
[2026-01-23 11:12:32] 2026-01-23 16:11:48,485 | INFO     | corecount: 8
[2026-01-23 11:12:32] 2026-01-23 16:11:48,485 | INFO     | event service: False
[2026-01-23 11:12:32] 2026-01-23 16:11:48,485 | INFO     | sizes: {0: 2284031, 1: 2284265, 9932: 2312888, 9933: 2321886, 9935: 2321942, 9936: 2322200}
[2026-01-23 11:12:32] 2026-01-23 16:11:48,485 | INFO     | --------------------------------------------------
[2026-01-23 11:12:32] 2026-01-23 16:11:48,485 | INFO     | 
[2026-01-23 11:12:32] 2026-01-23 16:11:48,486 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-01-23 11:12:32] 2026-01-23 16:11:48,504 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-23 11:12:32] 2026-01-23 16:11:48,505 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-23 11:12:32] 2026-01-23 16:11:48,505 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-23 11:12:32] 2026-01-23 16:11:48,505 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-23 11:12:32] 2026-01-23 16:11:48,505 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-23 11:12:32] 2026-01-23 16:11:48,506 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-23 11:12:32] 2026-01-23 16:11:48,506 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-23 11:12:32] 2026-01-23 16:11:48,506 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-23 11:12:32] 2026-01-23 16:11:48,506 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-23 11:12:32] 2026-01-23 16:11:48,506 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-23 11:12:32] 2026-01-23 16:11:48,507 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-23 11:12:32] 2026-01-23 16:11:48,507 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-23 11:12:32] 2026-01-23 16:11:48,507 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-23 11:12:32] 2026-01-23 16:11:48,507 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-23 11:12:32] 2026-01-23 16:11:48,507 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-23 11:12:32] 2026-01-23 16:11:48,507 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-23 11:12:32] 2026-01-23 16:11:48,508 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-23 11:12:32] 2026-01-23 16:11:48,508 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-23 11:12:32] 2026-01-23 16:11:48,508 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-23 11:12:32] 2026-01-23 16:11:48,508 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-23 11:12:32] 2026-01-23 16:11:48,509 | INFO     | job 6978384635 has completed (purged errors)
[2026-01-23 11:12:32] 2026-01-23 16:11:48,509 | INFO     | overall cleanup function is called
[2026-01-23 11:12:32] 2026-01-23 16:11:49,517 | INFO     | --- collectZombieJob: --- 10, [30677]
[2026-01-23 11:12:32] 2026-01-23 16:11:49,517 | INFO     | zombie collector waiting for pid 30677
[2026-01-23 11:12:32] 2026-01-23 16:11:49,517 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-23 11:12:32] 2026-01-23 16:11:49,518 | INFO     | collected zombie processes
[2026-01-23 11:12:32] 2026-01-23 16:11:49,518 | INFO     | will attempt to kill all subprocesses of pid=30677
[2026-01-23 11:12:32] 2026-01-23 16:11:49,686 | INFO     | process IDs to be killed: [30677] (in reverse order)
[2026-01-23 11:12:32] 2026-01-23 16:11:49,739 | WARNING  | found no corresponding commands to process id(s)
[2026-01-23 11:12:32] 2026-01-23 16:11:49,740 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-23 11:12:32] 2026-01-23 16:11:49,742 | INFO     | did not find any defunct processes belonging to 30677
[2026-01-23 11:12:32] 2026-01-23 16:11:49,745 | INFO     | did not find any defunct processes belonging to 30677
[2026-01-23 11:12:32] 2026-01-23 16:11:49,745 | INFO     | ready for new job
[2026-01-23 11:12:32] 2026-01-23 16:11:49,745 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-23 11:12:32] 2026-01-23 16:11:49,746 | INFO     | **************************************
[2026-01-23 11:12:32] 2026-01-23 16:11:49,746 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-23 11:12:32] 2026-01-23 16:11:49,747 | INFO     | **************************************
[2026-01-23 11:12:32] 2026-01-23 16:11:49,747 | INFO     | 
[2026-01-23 11:12:32] 2026-01-23 16:11:49,747 | INFO     | architecture information:
[2026-01-23 11:12:32] 2026-01-23 16:11:49,748 | INFO     | executing command: cat /etc/os-release
[2026-01-23 11:12:32] 2026-01-23 16:11:49,759 | INFO     | cat /etc/os-release:
[2026-01-23 11:12:32] NAME="CentOS Linux"
[2026-01-23 11:12:32] VERSION="7 (Core)"
[2026-01-23 11:12:32] ID="centos"
[2026-01-23 11:12:32] ID_LIKE="rhel fedora"
[2026-01-23 11:12:32] VERSION_ID="7"
[2026-01-23 11:12:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-23 11:12:32] ANSI_COLOR="0;31"
[2026-01-23 11:12:32] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-23 11:12:32] HOME_URL="https://www.centos.org/"
[2026-01-23 11:12:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-23 11:12:32] 
[2026-01-23 11:12:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-23 11:12:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-23 11:12:32] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-23 11:12:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-23 11:12:32] 
[2026-01-23 11:12:32] 2026-01-23 16:11:49,759 | INFO     | **************************************
[2026-01-23 11:12:32] 2026-01-23 16:11:50,262 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-01-23 11:12:32] 2026-01-23 16:11:50,278 | INFO     | sufficient remaining disk space (26426212352 B)
[2026-01-23 11:12:32] 2026-01-23 16:11:50,278 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-23 11:12:32] 2026-01-23 16:11:50,278 | INFO     | current server update state: UPDATING_FINAL
[2026-01-23 11:12:32] 2026-01-23 16:11:50,278 | INFO     | update_server=False
[2026-01-23 11:12:32] 2026-01-23 16:11:50,278 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-23 11:12:32] 2026-01-23 16:11:50,279 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-23 11:12:32] 2026-01-23 16:11:50,281 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-23 11:12:32] 2026-01-23 16:11:50,282 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-23 11:12:32] 2026-01-23 16:11:50,282 | INFO     | aborting loop
[2026-01-23 11:12:32] 2026-01-23 16:11:50,331 | INFO     | all payload control threads have been joined
[2026-01-23 11:12:32] 2026-01-23 16:11:50,519 | INFO     | all data control threads have been joined
[2026-01-23 11:12:32] 2026-01-23 16:11:51,284 | INFO     | [job] retrieve thread has finished
[2026-01-23 11:12:32] 2026-01-23 16:11:51,287 | INFO     | [job] queue monitor thread has finished
[2026-01-23 11:12:32] 2026-01-23 16:11:51,288 | INFO     | [job] job monitor thread has finished
[2026-01-23 11:12:32] 2026-01-23 16:11:51,333 | INFO     | [payload] control thread has finished
[2026-01-23 11:12:32] 2026-01-23 16:11:51,484 | INFO     | [payload] failed_post thread has finished
[2026-01-23 11:12:32] 2026-01-23 16:11:51,525 | INFO     | [data] control thread has finished
[2026-01-23 11:12:32] 2026-01-23 16:11:51,598 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-23 11:12:32] 2026-01-23 16:11:51,628 | INFO     | [job] validate thread has finished
[2026-01-23 11:12:32] 2026-01-23 16:11:51,831 | INFO     | all job control threads have been joined
[2026-01-23 11:12:32] 2026-01-23 16:11:51,887 | INFO     | [data] copytool_in thread has finished
[2026-01-23 11:12:32] 2026-01-23 16:11:51,887 | INFO     | [payload] validate_pre thread has finished
[2026-01-23 11:12:32] 2026-01-23 16:11:51,888 | INFO     | [job] create_data_payload thread has finished
[2026-01-23 11:12:32] 2026-01-23 16:11:52,004 | INFO     | [payload] execute_payloads thread has finished
[2026-01-23 11:12:32] 2026-01-23 16:11:52,500 | INFO     | [payload] validate_post thread has finished
[2026-01-23 11:12:32] 2026-01-23 16:11:52,837 | INFO     | [job] control thread has finished
[2026-01-23 11:12:32] 2026-01-23 16:11:53,603 | INFO     | [data] copytool_out thread has finished
[2026-01-23 11:12:32] 2026-01-23 16:11:54,285 | INFO     | [data] queue_monitor thread has finished
[2026-01-23 11:12:32] 2026-01-23 16:12:01,333 | INFO     | job.realtimelogging is not enabled
[2026-01-23 11:12:32] 2026-01-23 16:12:02,342 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-23 11:12:32] 2026-01-23 16:12:20,545 | INFO     | PID=26310 has CPU usage=5.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-23 11:12:32] 2026-01-23 16:12:20,545 | INFO     | .. there are 3 such processes running
[2026-01-23 11:12:32] 2026-01-23 16:12:20,546 | INFO     | found 0 job(s) in 20 queues
[2026-01-23 11:12:32] 2026-01-23 16:12:20,546 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-23 11:12:32] 2026-01-23 16:12:20,546 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-23 11:12:32] 2026-01-23 16:12:26,936 | INFO     | [monitor] cgroup control has ended
[2026-01-23 11:12:32] 2026-01-23 16:12:27,393 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140210460591936)>', '<ExcThread(monitor, started 140209660352256)>']
[2026-01-23 11:12:32] 2026-01-23 16:12:27,581 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-23 11:12:32] 2026-01-23 16:12:27,582 | INFO     | [monitor] control thread has ended
[2026-01-23 11:12:32] 2026-01-23 16:12:32,417 | INFO     | all workflow threads have been joined
[2026-01-23 11:12:32] 2026-01-23 16:12:32,418 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-23 11:12:32] 2026-01-23 16:12:32,418 | INFO     | traces error code: 0
[2026-01-23 11:12:32] 2026-01-23 16:12:32,418 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-23 11:12:32] 2026-01-23 16:12:32,545 [wrapper] ==== pilot stdout END ====
[2026-01-23 11:12:32] 2026-01-23 16:12:32,547 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-23 11:12:32] 2026-01-23 16:12:32,550 [wrapper] pilotpid: 26310
[2026-01-23 11:12:32] 2026-01-23 16:12:32,552 [wrapper] Pilot exit status: 0
[2026-01-23 11:12:32] 2026-01-23 16:12:32,560 [wrapper] pandaids: 6978384635
[2026-01-23 11:12:32] 2026-01-23 16:12:32,599 [wrapper] cleanup supervisor_pilot  8890 26311
[2026-01-23 11:12:32] 2026-01-23 16:12:32,601 [wrapper] Test setup, not cleaning
[2026-01-23 11:12:32] 2026-01-23 16:12:32,604 [wrapper] apfmon messages muted
[2026-01-23 11:12:32] 2026-01-23 16:12:32,606 [wrapper] ==== wrapper stdout END ====
[2026-01-23 11:12:32] 2026-01-23 16:12:32,608 [wrapper] ==== wrapper stderr END ====
[2026-01-23 11:12:32]  *** Error codes and diagnostics ***
[2026-01-23 11:12:32]     "exeErrorCode": 0,
[2026-01-23 11:12:32]     "exeErrorDiag": "",
[2026-01-23 11:12:32]     "pilotErrorCode": 0,
[2026-01-23 11:12:32]     "pilotErrorDiag": "",
[2026-01-23 11:12:32]  *** Listing of results directory ***
[2026-01-23 11:12:32] total 667648
[2026-01-23 11:12:32] -rw-r--r-- 1 boincer umatlas    584422 Jan 23 04:46 pilot3.tar.gz
[2026-01-23 11:12:32] -rwx------ 1 boincer umatlas     36322 Jan 23 04:46 runpilot2-wrapper.sh
[2026-01-23 11:12:32] -rw-r--r-- 1 boincer umatlas      5111 Jan 23 04:47 queuedata.json
[2026-01-23 11:12:32] -rw-r--r-- 1 boincer umatlas       100 Jan 23 08:25 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-23 11:12:32] -rwxr-xr-x 1 boincer umatlas      7986 Jan 23 08:25 run_atlas
[2026-01-23 11:12:32] -rw-r--r-- 1 boincer umatlas       105 Jan 23 08:25 job.xml
[2026-01-23 11:12:32] -rw-r--r-- 2 boincer umatlas 493255951 Jan 23 08:25 EVNT.48310824._000017.pool.root.1
[2026-01-23 11:12:32] -rw-r--r-- 2 boincer umatlas     15845 Jan 23 08:25 start_atlas.sh
[2026-01-23 11:12:32] drwxrwx--x 2 boincer umatlas      4096 Jan 23 08:25 shared
[2026-01-23 11:12:32] -rw-r--r-- 2 boincer umatlas    597751 Jan 23 08:25 input.tar.gz
[2026-01-23 11:12:32] -rw-r--r-- 1 boincer umatlas         0 Jan 23 08:25 boinc_lockfile
[2026-01-23 11:12:32] -rw-r--r-- 1 boincer umatlas      2522 Jan 23 08:25 pandaJob.out
[2026-01-23 11:12:32] -rw------- 1 boincer umatlas        57 Jan 23 08:25 setup.sh.local
[2026-01-23 11:12:32] -rw------- 1 boincer umatlas   1004198 Jan 23 08:26 agis_schedconf.cvmfs.json
[2026-01-23 11:12:32] -rw------- 1 boincer umatlas   1516246 Jan 23 08:26 agis_ddmendpoints.agis.ALL.json
[2026-01-23 11:12:32] -rw------- 1 boincer umatlas       435 Jan 23 08:26 workernode_map.json
[2026-01-23 11:12:32] drwx------ 5 boincer umatlas      4096 Jan 23 08:26 pilot3
[2026-01-23 11:12:32] -rw-r--r-- 1 boincer umatlas      5951 Jan 23 11:10 init_data.xml
[2026-01-23 11:12:32] -rw------- 1 boincer umatlas 182857859 Jan 23 11:11 HITS.48310826._000709.pool.root.1
[2026-01-23 11:12:32] -rw------- 1 boincer umatlas        95 Jan 23 11:11 pilot_heartbeat.json
[2026-01-23 11:12:32] -rw-r--r-- 1 boincer umatlas       530 Jan 23 11:11 boinc_task_state.xml
[2026-01-23 11:12:32] -rw------- 1 boincer umatlas      1053 Jan 23 11:11 memory_monitor_summary.json
[2026-01-23 11:12:32] -rw------- 1 boincer umatlas    398694 Jan 23 11:11 log.48310826._000709.job.log.tgz.1
[2026-01-23 11:12:32] -rw------- 1 boincer umatlas      6405 Jan 23 11:11 heartbeat.json
[2026-01-23 11:12:32] -rw-r--r-- 1 boincer umatlas      8192 Jan 23 11:12 boinc_mmap_file
[2026-01-23 11:12:32] -rw-r--r-- 1 boincer umatlas        28 Jan 23 11:12 wrapper_checkpoint.txt
[2026-01-23 11:12:32] -rw------- 1 boincer umatlas      4889 Jan 23 11:12 pilotlog.txt
[2026-01-23 11:12:32] -rw------- 1 boincer umatlas   1411053 Jan 23 11:12 log.48310826._000709.job.log.1
[2026-01-23 11:12:32] -rw------- 1 boincer umatlas       357 Jan 23 11:12 output.list
[2026-01-23 11:12:32] -rw-r--r-- 1 boincer umatlas       620 Jan 23 11:12 runtime_log
[2026-01-23 11:12:32] -rw------- 1 boincer umatlas   1822720 Jan 23 11:12 result.tar.gz
[2026-01-23 11:12:32] -rw-r--r-- 1 boincer umatlas      9341 Jan 23 11:12 runtime_log.err
[2026-01-23 11:12:32] -rw------- 1 boincer umatlas       659 Jan 23 11:12 12QNDmcvS38n9Rq4apOajLDm4fhM0noT9bVo0NGKDmQkvKDm71bGCn.diag
[2026-01-23 11:12:32] -rw-r--r-- 1 boincer umatlas     20865 Jan 23 11:12 stderr.txt
[2026-01-23 11:12:32] HITS file was successfully produced:
[2026-01-23 11:12:32] -rw------- 1 boincer umatlas 182857859 Jan 23 11:11 shared/HITS.pool.root.1
[2026-01-23 11:12:32]  *** Contents of shared directory: ***
[2026-01-23 11:12:32] total 662656
[2026-01-23 11:12:32] -rw-r--r-- 2 boincer umatlas 493255951 Jan 23 08:25 ATLAS.root_0
[2026-01-23 11:12:32] -rw-r--r-- 2 boincer umatlas     15845 Jan 23 08:25 start_atlas.sh
[2026-01-23 11:12:32] -rw-r--r-- 2 boincer umatlas    597751 Jan 23 08:25 input.tar.gz
[2026-01-23 11:12:32] -rw------- 1 boincer umatlas 182857859 Jan 23 11:11 HITS.pool.root.1
[2026-01-23 11:12:32] -rw------- 1 boincer umatlas   1822720 Jan 23 11:12 result.tar.gz
11:12:33 (22265): run_atlas exited; CPU time 75469.971188
11:12:33 (22265): called boinc_finish(0)

</stderr_txt>
]]>

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