Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
08:39:59 (2688448): wrapper (7.7.26015): starting
08:39:59 (2688448): wrapper: running run_atlas (--nthreads 9)
[2026-01-23 08:39:59] Arguments: --nthreads 9
[2026-01-23 08:39:59] Threads: 9
[2026-01-23 08:39:59] Checking for CVMFS
[2026-01-23 08:40:00] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-23 08:40:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-23 08:40:00] Running cvmfs_config stat atlas.cern.ch
[2026-01-23 08:40:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-23 08:40:00] 2.13.3.0 11314 113642 232728 155432 0 111 31139858 32935936 23691 16776704 0 747387011 99.597 800837089 35913 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-23 08:40:00] CVMFS is ok
[2026-01-23 08:40:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-23 08:40:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-23 08:40:00] Further information can be found at the LHC@home message board.
[2026-01-23 08:40:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-23 08:40:00] Checking for apptainer binary...
[2026-01-23 08:40:00] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-23 08:40:00] Running /usr/bin/apptainer --version
[2026-01-23 08:40:00] apptainer version 1.4.5-2.el9
[2026-01-23 08:40:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-23 08:40:00] c7-2-10.aglt2.org
[2026-01-23 08:40:00] apptainer works
[2026-01-23 08:40:00] Set ATHENA_PROC_NUMBER=9
[2026-01-23 08:40:00] Set ATHENA_CORE_NUMBER=9
[2026-01-23 08:40:00] Starting ATLAS job with PandaID=6969984412
[2026-01-23 08:40:00] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-23 10:15:58]  *** The last 200 lines of the pilot log: ***
[2026-01-23 10:15:58] 2026-01-23 15:15:08,918 | INFO     | transferring file log.48215263._039840.job.log.tgz.1 from /tmp/boinchome/slots/2/PanDA_Pilot-6969984412/log.48215263._039840.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-01-23 10:15:58] 2026-01-23 15:15:08,918 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/2/PanDA_Pilot-6969984412/log.48215263._039840.job.log.tgz.1 /tmp/boinchome/slots/2/log.48215263._039840.job
[2026-01-23 10:15:58] 2026-01-23 15:15:08,942 | INFO     | adding to output.list: log.48215263._039840.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/6f/18/log.48215263._039840.job.log.tg
[2026-01-23 10:15:58] 2026-01-23 15:15:08,943 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-23 10:15:58] 2026-01-23 15:15:08,943 | INFO     | summary of transferred files:
[2026-01-23 10:15:58] 2026-01-23 15:15:08,944 | INFO     |  -- lfn=log.48215263._039840.job.log.tgz.1, status_code=0, status=transferred
[2026-01-23 10:15:58] 2026-01-23 15:15:08,944 | INFO     | stage-out finished correctly
[2026-01-23 10:15:58] 2026-01-23 15:15:09,897 | INFO     | time since job start (5678s) is within the limit (349056.0s)
[2026-01-23 10:15:58] 2026-01-23 15:15:11,787 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-23 10:15:58] 2026-01-23 15:15:11,908 | INFO     | time since job start (5680s) is within the limit (349056.0s)
[2026-01-23 10:15:58] 2026-01-23 15:15:12,227 | INFO     | job 6969984412 has state=finished
[2026-01-23 10:15:58] 2026-01-23 15:15:12,228 | INFO     | preparing for final server update for job 6969984412 in state='finished'
[2026-01-23 10:15:58] 2026-01-23 15:15:12,228 | INFO     | this job has now completed (state=finished)
[2026-01-23 10:15:58] 2026-01-23 15:15:12,228 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-23 10:15:58] 2026-01-23 15:15:12,228 | INFO     | log transfer has been attempted: DONE
[2026-01-23 10:15:58] 2026-01-23 15:15:12,228 | INFO     | job 6969984412 has finished - writing final server update
[2026-01-23 10:15:58] 2026-01-23 15:15:12,229 | INFO     | total number of processed events: 400 (read)
[2026-01-23 10:15:58] 2026-01-23 15:15:12,240 | INFO     | executing command: lscpu
[2026-01-23 10:15:58] 2026-01-23 15:15:12,408 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-23 10:15:58] 2026-01-23 15:15:12,579 | WARNING  | process 2700715 can no longer be monitored (due to stat problems) - aborting
[2026-01-23 10:15:58] 2026-01-23 15:15:12,579 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6969984412/memory_monitor_summary.json (trf name=prmon)
[2026-01-23 10:15:58] 2026-01-23 15:15:12,581 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 3602943 B
[2026-01-23 10:15:58] 2026-01-23 15:15:12,582 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 15839 B
[2026-01-23 10:15:58] 2026-01-23 15:15:12,582 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-01-23 10:15:58] 2026-01-23 15:15:13,919 | INFO     | time since job start (5682s) is within the limit (349056.0s)
[2026-01-23 10:15:58] 2026-01-23 15:15:15,926 | INFO     | time since job start (5684s) is within the limit (349056.0s)
[2026-01-23 10:15:58] 2026-01-23 15:15:17,933 | INFO     | time since job start (5686s) is within the limit (349056.0s)
[2026-01-23 10:15:58] 2026-01-23 15:15:19,942 | INFO     | time since job start (5688s) is within the limit (349056.0s)
[2026-01-23 10:15:58] 2026-01-23 15:15:20,121 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-23 10:15:58] 2026-01-23 15:15:20,140 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3181.21396875
[2026-01-23 10:15:58] 2026-01-23 15:15:20,152 | INFO     | sufficient remaining disk space (71071432704 B)
[2026-01-23 10:15:58] 2026-01-23 15:15:20,152 | INFO     | work directory size check will use 4404019200 B as a max limit (20% grace limit added, divider=1)
[2026-01-23 10:15:58] 2026-01-23 15:15:20,153 | INFO     | size of work directory /tmp/boinchome/slots/2/PanDA_Pilot-6969984412: 3909213 B (within 4404019200 B limit)
[2026-01-23 10:15:58] 2026-01-23 15:15:20,153 | INFO     | pfn file=/tmp/boinchome/slots/2/PanDA_Pilot-6969984412/HITS.48215263._039840.pool.root.1 does not exist (skip from workdir size calculation)
[2026-01-23 10:15:58] 2026-01-23 15:15:20,153 | INFO     | total size of present files: 0 B (workdir size: 3909213 B)
[2026-01-23 10:15:58] 2026-01-23 15:15:20,153 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/2/PanDA_Pilot-6969984412/HITS.48215263._039840.pool.root.1 since it does not exist
[2026-01-23 10:15:58] 2026-01-23 15:15:20,172 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6969984412/memory_monitor_summary.json (trf name=prmon)
[2026-01-23 10:15:58] 2026-01-23 15:15:20,173 | INFO     | extracted standard info from prmon json
[2026-01-23 10:15:58] 2026-01-23 15:15:20,173 | INFO     | extracted standard memory fields from prmon json
[2026-01-23 10:15:58] 2026-01-23 15:15:20,173 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-23 10:15:58] 2026-01-23 15:15:20,173 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-23 10:15:58] 2026-01-23 15:15:20,173 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-23 10:15:58] 2026-01-23 15:15:20,175 | INFO     | fitting pss+swap vs Time
[2026-01-23 10:15:58] 2026-01-23 15:15:20,175 | INFO     | sum of square deviations: 190386136.8235292
[2026-01-23 10:15:58] 2026-01-23 15:15:20,175 | INFO     | sum of deviations: -735102648.0588237
[2026-01-23 10:15:58] 2026-01-23 15:15:20,175 | INFO     | mean x: 1769178558.1176472
[2026-01-23 10:15:58] 2026-01-23 15:15:20,175 | INFO     | mean y: 2610650.305882353
[2026-01-23 10:15:58] 2026-01-23 15:15:20,175 | INFO     | intersect: 6833611397.837443
[2026-01-23 10:15:58] 2026-01-23 15:15:20,176 | INFO     | chi2: 0.08449737681698304
[2026-01-23 10:15:58] 2026-01-23 15:15:20,176 | INFO     | current memory leak: -3.86 B/s (using 85 data points, chi2=0.08)
[2026-01-23 10:15:58] 2026-01-23 15:15:20,176 | INFO     | could have reported an average CPU frequency of 3208 MHz (7 samples)
[2026-01-23 10:15:58] 2026-01-23 15:15:20,176 | INFO     | ..............................
[2026-01-23 10:15:58] 2026-01-23 15:15:20,176 | INFO     | . Timing measurements:
[2026-01-23 10:15:58] 2026-01-23 15:15:20,176 | INFO     | . get job = 0 s
[2026-01-23 10:15:58] 2026-01-23 15:15:20,176 | INFO     | . initial setup = 6 s
[2026-01-23 10:15:58] 2026-01-23 15:15:20,176 | INFO     | . payload setup = 16 s
[2026-01-23 10:15:58] 2026-01-23 15:15:20,176 | INFO     | . stage-in = 0 s
[2026-01-23 10:15:58] 2026-01-23 15:15:20,176 | INFO     | . payload execution = 5622 s
[2026-01-23 10:15:58] 2026-01-23 15:15:20,177 | INFO     | . stage-out = 1 s
[2026-01-23 10:15:58] 2026-01-23 15:15:20,177 | INFO     | . log creation = 0 s
[2026-01-23 10:15:58] 2026-01-23 15:15:20,177 | INFO     | ..............................
[2026-01-23 10:15:58] 2026-01-23 15:15:20,293 | INFO     | 
[2026-01-23 10:15:58] 2026-01-23 15:15:20,304 | INFO     | job summary report
[2026-01-23 10:15:58] 2026-01-23 15:15:20,304 | INFO     | --------------------------------------------------
[2026-01-23 10:15:58] 2026-01-23 15:15:20,304 | INFO     | PanDA job id: 6969984412
[2026-01-23 10:15:58] 2026-01-23 15:15:20,304 | INFO     | task id: 48215263
[2026-01-23 10:15:58] 2026-01-23 15:15:20,304 | INFO     | errors: (none)
[2026-01-23 10:15:58] 2026-01-23 15:15:20,304 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-23 10:15:58] 2026-01-23 15:15:20,304 | INFO     | pilot state: finished 
[2026-01-23 10:15:58] 2026-01-23 15:15:20,305 | INFO     | transexitcode: 0
[2026-01-23 10:15:58] 2026-01-23 15:15:20,305 | INFO     | exeerrorcode: 0
[2026-01-23 10:15:58] 2026-01-23 15:15:20,305 | INFO     | exeerrordiag: 
[2026-01-23 10:15:58] 2026-01-23 15:15:20,305 | INFO     | exitcode: 0
[2026-01-23 10:15:58] 2026-01-23 15:15:20,305 | INFO     | exitmsg: OK
[2026-01-23 10:15:58] 2026-01-23 15:15:20,305 | INFO     | cpuconsumptiontime: 21208 s
[2026-01-23 10:15:58] 2026-01-23 15:15:20,305 | INFO     | nevents: 400
[2026-01-23 10:15:58] 2026-01-23 15:15:20,307 | INFO     | neventsw: 0
[2026-01-23 10:15:58] 2026-01-23 15:15:20,307 | INFO     | pid: 2700715
[2026-01-23 10:15:58] 2026-01-23 15:15:20,307 | INFO     | pgrp: 2700715
[2026-01-23 10:15:58] 2026-01-23 15:15:20,307 | INFO     | corecount: 9
[2026-01-23 10:15:58] 2026-01-23 15:15:20,307 | INFO     | event service: False
[2026-01-23 10:15:58] 2026-01-23 15:15:20,308 | INFO     | sizes: {0: 2283724, 1: 2283979, 12: 2283979, 15: 2284269, 23: 2284297, 5643: 2310989, 5646: 2319987, 5649: 2320043, 5657: 2320265}
[2026-01-23 10:15:58] 2026-01-23 15:15:20,316 | INFO     | --------------------------------------------------
[2026-01-23 10:15:58] 2026-01-23 15:15:20,316 | INFO     | 
[2026-01-23 10:15:58] 2026-01-23 15:15:20,316 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2026-01-23 10:15:58] 2026-01-23 15:15:20,377 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-23 10:15:58] 2026-01-23 15:15:20,377 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-23 10:15:58] 2026-01-23 15:15:20,377 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-23 10:15:58] 2026-01-23 15:15:20,377 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-23 10:15:58] 2026-01-23 15:15:20,377 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-23 10:15:58] 2026-01-23 15:15:20,377 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-23 10:15:58] 2026-01-23 15:15:20,378 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-23 10:15:58] 2026-01-23 15:15:20,378 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-23 10:15:58] 2026-01-23 15:15:20,378 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-23 10:15:58] 2026-01-23 15:15:20,378 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-23 10:15:58] 2026-01-23 15:15:20,378 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-23 10:15:58] 2026-01-23 15:15:20,378 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-23 10:15:58] 2026-01-23 15:15:20,378 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-23 10:15:58] 2026-01-23 15:15:20,378 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-23 10:15:58] 2026-01-23 15:15:20,378 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-23 10:15:58] 2026-01-23 15:15:20,378 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-23 10:15:58] 2026-01-23 15:15:20,378 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-23 10:15:58] 2026-01-23 15:15:20,378 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-23 10:15:58] 2026-01-23 15:15:20,378 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-23 10:15:58] 2026-01-23 15:15:20,378 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-23 10:15:58] 2026-01-23 15:15:20,379 | INFO     | job 6969984412 has completed (purged errors)
[2026-01-23 10:15:58] 2026-01-23 15:15:20,379 | INFO     | overall cleanup function is called
[2026-01-23 10:15:58] 2026-01-23 15:15:21,010 | INFO     | number of running child processes to parent process 2700715: 1
[2026-01-23 10:15:58] 2026-01-23 15:15:21,010 | INFO     | maximum number of monitored processes: 6
[2026-01-23 10:15:58] 2026-01-23 15:15:21,011 | INFO     | aborting job monitoring since job object (job id=6969984412) has expired
[2026-01-23 10:15:58] 2026-01-23 15:15:21,394 | INFO     | --- collectZombieJob: --- 10, [2700715]
[2026-01-23 10:15:58] 2026-01-23 15:15:21,394 | INFO     | zombie collector waiting for pid 2700715
[2026-01-23 10:15:58] 2026-01-23 15:15:21,395 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-23 10:15:58] 2026-01-23 15:15:21,395 | INFO     | collected zombie processes
[2026-01-23 10:15:58] 2026-01-23 15:15:21,395 | INFO     | will attempt to kill all subprocesses of pid=2700715
[2026-01-23 10:15:58] 2026-01-23 15:15:22,861 | INFO     | process IDs to be killed: [2700715] (in reverse order)
[2026-01-23 10:15:58] 2026-01-23 15:15:23,275 | WARNING  | found no corresponding commands to process id(s)
[2026-01-23 10:15:58] 2026-01-23 15:15:23,304 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-23 10:15:58] 2026-01-23 15:15:23,465 | INFO     | did not find any defunct processes belonging to 2700715
[2026-01-23 10:15:58] 2026-01-23 15:15:23,534 | INFO     | did not find any defunct processes belonging to 2700715
[2026-01-23 10:15:58] 2026-01-23 15:15:23,535 | INFO     | ready for new job
[2026-01-23 10:15:58] 2026-01-23 15:15:23,535 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-23 10:15:58] 2026-01-23 15:15:23,575 | INFO     | ***************************************
[2026-01-23 10:15:58] 2026-01-23 15:15:23,576 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-23 10:15:58] 2026-01-23 15:15:23,576 | INFO     | ***************************************
[2026-01-23 10:15:58] 2026-01-23 15:15:23,576 | INFO     | 
[2026-01-23 10:15:58] 2026-01-23 15:15:23,650 | INFO     | architecture information:
[2026-01-23 10:15:58] 2026-01-23 15:15:23,694 | INFO     | executing command: cat /etc/os-release
[2026-01-23 10:15:58] 2026-01-23 15:15:23,848 | INFO     | cat /etc/os-release:
[2026-01-23 10:15:58] NAME="CentOS Linux"
[2026-01-23 10:15:58] VERSION="7 (Core)"
[2026-01-23 10:15:58] ID="centos"
[2026-01-23 10:15:58] ID_LIKE="rhel fedora"
[2026-01-23 10:15:58] VERSION_ID="7"
[2026-01-23 10:15:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-23 10:15:58] ANSI_COLOR="0;31"
[2026-01-23 10:15:58] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-23 10:15:58] HOME_URL="https://www.centos.org/"
[2026-01-23 10:15:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-23 10:15:58] 
[2026-01-23 10:15:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-23 10:15:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-23 10:15:58] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-23 10:15:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-23 10:15:58] 
[2026-01-23 10:15:58] 2026-01-23 15:15:23,848 | INFO     | ***************************************
[2026-01-23 10:15:58] 2026-01-23 15:15:24,356 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2026-01-23 10:15:58] 2026-01-23 15:15:24,402 | INFO     | sufficient remaining disk space (71075627008 B)
[2026-01-23 10:15:58] 2026-01-23 15:15:24,402 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-23 10:15:58] 2026-01-23 15:15:24,402 | INFO     | current server update state: UPDATING_FINAL
[2026-01-23 10:15:58] 2026-01-23 15:15:24,402 | INFO     | update_server=False
[2026-01-23 10:15:58] 2026-01-23 15:15:24,402 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-23 10:15:58] 2026-01-23 15:15:24,525 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-23 10:15:58] 2026-01-23 15:15:24,526 | INFO     | aborting loop
[2026-01-23 10:15:58] 2026-01-23 15:15:24,700 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-23 10:15:58] 2026-01-23 15:15:25,089 | INFO     | all data control threads have been joined
[2026-01-23 10:15:58] 2026-01-23 15:15:25,320 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-23 10:15:58] 2026-01-23 15:15:25,389 | INFO     | all job control threads have been joined
[2026-01-23 10:15:58] 2026-01-23 15:15:25,412 | INFO     | [job] retrieve thread has finished
[2026-01-23 10:15:58] 2026-01-23 15:15:25,412 | INFO     | [payload] validate_pre thread has finished
[2026-01-23 10:15:58] 2026-01-23 15:15:25,474 | INFO     | all payload control threads have been joined
[2026-01-23 10:15:58] 2026-01-23 15:15:25,498 | INFO     | [payload] validate_post thread has finished
[2026-01-23 10:15:58] 2026-01-23 15:15:25,532 | INFO     | [job] job monitor thread has finished
[2026-01-23 10:15:58] 2026-01-23 15:15:25,789 | INFO     | [payload] failed_post thread has finished
[2026-01-23 10:15:58] 2026-01-23 15:15:26,097 | INFO     | [data] control thread has finished
[2026-01-23 10:15:58] 2026-01-23 15:15:26,326 | INFO     | [job] queue monitor thread has finished
[2026-01-23 10:15:58] 2026-01-23 15:15:26,395 | INFO     | [job] control thread has finished
[2026-01-23 10:15:58] 2026-01-23 15:15:26,431 | INFO     | [job] create_data_payload thread has finished
[2026-01-23 10:15:58] 2026-01-23 15:15:26,480 | INFO     | [payload] control thread has finished
[2026-01-23 10:15:58] 2026-01-23 15:15:26,556 | INFO     | [job] validate thread has finished
[2026-01-23 10:15:58] 2026-01-23 15:15:26,707 | INFO     | [data] copytool_out thread has finished
[2026-01-23 10:15:58] 2026-01-23 15:15:26,742 | INFO     | [payload] execute_payloads thread has finished
[2026-01-23 10:15:58] 2026-01-23 15:15:26,901 | INFO     | [data] copytool_in thread has finished
[2026-01-23 10:15:58] 2026-01-23 15:15:26,927 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-23 10:15:58] 2026-01-23 15:15:30,935 | INFO     | [data] queue_monitor thread has finished
[2026-01-23 10:15:58] 2026-01-23 15:15:35,371 | INFO     | job.realtimelogging is not enabled
[2026-01-23 10:15:58] 2026-01-23 15:15:36,377 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-23 10:15:58] 2026-01-23 15:15:40,892 | INFO     | [monitor] cgroup control has ended
[2026-01-23 10:15:58] 2026-01-23 15:15:41,064 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139643568125760)>', '<ExcThread(monitor, started 139642909210368)>']
[2026-01-23 10:15:58] 2026-01-23 15:15:46,090 | INFO     | all workflow threads have been joined
[2026-01-23 10:15:58] 2026-01-23 15:15:46,091 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-23 10:15:58] 2026-01-23 15:15:46,091 | INFO     | traces error code: 0
[2026-01-23 10:15:58] 2026-01-23 15:15:46,091 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-23 10:15:58] 2026-01-23 15:15:56,955 | INFO     | PID=2693572 has CPU usage=6.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-23 10:15:58] 2026-01-23 15:15:56,955 | INFO     | .. there are 24 such processes running
[2026-01-23 10:15:58] 2026-01-23 15:15:56,956 | INFO     | found 0 job(s) in 20 queues
[2026-01-23 10:15:58] 2026-01-23 15:15:56,956 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-23 10:15:58] 2026-01-23 15:15:56,956 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-23 10:15:58] 2026-01-23 15:15:56,956 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-23 10:15:58] 2026-01-23 15:15:56,956 | INFO     | [monitor] control thread has ended
[2026-01-23 10:15:58] 2026-01-23 15:15:58,553 [wrapper] ==== pilot stdout END ====
[2026-01-23 10:15:58] 2026-01-23 15:15:58,555 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-23 10:15:58] 2026-01-23 15:15:58,558 [wrapper] pilotpid: 2693572
[2026-01-23 10:15:58] 2026-01-23 15:15:58,561 [wrapper] Pilot exit status: 0
[2026-01-23 10:15:58] 2026-01-23 15:15:58,603 [wrapper] pandaids: 6969984412
[2026-01-23 10:15:58] 2026-01-23 15:15:58,738 [wrapper] cleanup supervisor_pilot 2996761 2693573
[2026-01-23 10:15:58] 2026-01-23 15:15:58,740 [wrapper] Test setup, not cleaning
[2026-01-23 10:15:58] 2026-01-23 15:15:58,743 [wrapper] apfmon messages muted
[2026-01-23 10:15:58] 2026-01-23 15:15:58,745 [wrapper] ==== wrapper stdout END ====
[2026-01-23 10:15:58] 2026-01-23 15:15:58,747 [wrapper] ==== wrapper stderr END ====
[2026-01-23 10:15:58]  *** Error codes and diagnostics ***
[2026-01-23 10:15:58]     "exeErrorCode": 0,
[2026-01-23 10:15:58]     "exeErrorDiag": "",
[2026-01-23 10:15:58]     "pilotErrorCode": 0,
[2026-01-23 10:15:58]     "pilotErrorDiag": "",
[2026-01-23 10:15:58]  *** Listing of results directory ***
[2026-01-23 10:15:58] total 734824
[2026-01-23 10:15:58] -rw-r--r--. 1 boincer umatlas    579449 Jan 14 20:12 pilot3.tar.gz
[2026-01-23 10:15:58] -rw-r--r--. 1 boincer umatlas      5112 Jan 14 20:15 queuedata.json
[2026-01-23 10:15:58] -rwx------. 1 boincer umatlas     36322 Jan 14 20:16 runpilot2-wrapper.sh
[2026-01-23 10:15:58] -rw-r--r--. 1 boincer umatlas       100 Jan 23 08:39 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-23 10:15:58] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 23 08:39 run_atlas
[2026-01-23 10:15:58] -rw-r--r--. 1 boincer umatlas       105 Jan 23 08:39 job.xml
[2026-01-23 10:15:58] -rw-r--r--. 2 boincer umatlas 595217211 Jan 23 08:39 EVNT.32794306._001588.pool.root.1
[2026-01-23 10:15:58] drwxrwx--x. 2 boincer umatlas      4096 Jan 23 08:39 shared
[2026-01-23 10:15:58] -rw-r--r--. 2 boincer umatlas    592406 Jan 23 08:39 input.tar.gz
[2026-01-23 10:15:58] -rw-r--r--. 2 boincer umatlas     15847 Jan 23 08:39 start_atlas.sh
[2026-01-23 10:15:58] -rw-r--r--. 1 boincer umatlas         0 Jan 23 08:39 boinc_lockfile
[2026-01-23 10:15:58] -rw-r--r--. 1 boincer umatlas      2508 Jan 23 08:40 pandaJob.out
[2026-01-23 10:15:58] -rw-------. 1 boincer umatlas        57 Jan 23 08:40 setup.sh.local
[2026-01-23 10:15:58] -rw-------. 1 boincer umatlas   1004198 Jan 23 08:40 agis_schedconf.cvmfs.json
[2026-01-23 10:15:58] -rw-------. 1 boincer umatlas   1516246 Jan 23 08:40 agis_ddmendpoints.agis.ALL.json
[2026-01-23 10:15:58] drwx------. 5 boincer umatlas      4096 Jan 23 08:40 pilot3
[2026-01-23 10:15:58] -rw-r--r--. 1 boincer umatlas      6943 Jan 23 10:12 init_data.xml
[2026-01-23 10:15:58] -rw-------. 1 boincer umatlas 151080524 Jan 23 10:14 HITS.48215263._039840.pool.root.1
[2026-01-23 10:15:58] -rw-r--r--. 1 boincer umatlas       530 Jan 23 10:14 boinc_task_state.xml
[2026-01-23 10:15:58] -rw-------. 1 boincer umatlas      1043 Jan 23 10:15 memory_monitor_summary.json
[2026-01-23 10:15:58] -rw-------. 1 boincer umatlas    355460 Jan 23 10:15 log.48215263._039840.job.log.tgz.1
[2026-01-23 10:15:58] -rw-------. 1 boincer umatlas        95 Jan 23 10:15 pilot_heartbeat.json
[2026-01-23 10:15:58] -rw-------. 1 boincer umatlas      7789 Jan 23 10:15 heartbeat.json
[2026-01-23 10:15:58] -rw-------. 1 boincer umatlas       823 Jan 23 10:15 pilotlog.txt
[2026-01-23 10:15:58] -rw-r--r--. 1 boincer umatlas      8192 Jan 23 10:15 boinc_mmap_file
[2026-01-23 10:15:58] -rw-r--r--. 1 boincer umatlas        27 Jan 23 10:15 wrapper_checkpoint.txt
[2026-01-23 10:15:58] -rw-------. 1 boincer umatlas    758354 Jan 23 10:15 log.48215263._039840.job.log.1
[2026-01-23 10:15:58] -rw-------. 1 boincer umatlas       357 Jan 23 10:15 output.list
[2026-01-23 10:15:58] -rw-r--r--. 1 boincer umatlas       620 Jan 23 10:15 runtime_log
[2026-01-23 10:15:58] -rw-------. 1 boincer umatlas   1136640 Jan 23 10:15 result.tar.gz
[2026-01-23 10:15:58] -rw-r--r--. 1 boincer umatlas      9337 Jan 23 10:15 runtime_log.err
[2026-01-23 10:15:58] -rw-------. 1 boincer umatlas       655 Jan 23 10:15 g7CMDmL9Q08nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm1VtKDmhIJsSm.diag
[2026-01-23 10:15:58] -rw-r--r--. 1 boincer umatlas     22769 Jan 23 10:15 stderr.txt
[2026-01-23 10:15:58] HITS file was successfully produced:
[2026-01-23 10:15:58] -rw-------. 1 boincer umatlas 151080524 Jan 23 10:14 shared/HITS.pool.root.1
[2026-01-23 10:15:58]  *** Contents of shared directory: ***
[2026-01-23 10:15:58] total 730524
[2026-01-23 10:15:58] -rw-r--r--. 2 boincer umatlas 595217211 Jan 23 08:39 ATLAS.root_0
[2026-01-23 10:15:58] -rw-r--r--. 2 boincer umatlas    592406 Jan 23 08:39 input.tar.gz
[2026-01-23 10:15:58] -rw-r--r--. 2 boincer umatlas     15847 Jan 23 08:39 start_atlas.sh
[2026-01-23 10:15:58] -rw-------. 1 boincer umatlas 151080524 Jan 23 10:14 HITS.pool.root.1
[2026-01-23 10:15:58] -rw-------. 1 boincer umatlas   1136640 Jan 23 10:15 result.tar.gz
10:16:00 (2688448): run_atlas exited; CPU time 21389.684648
10:16:00 (2688448): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN