Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:33:44 (1721760): wrapper (7.7.26015): starting
22:33:44 (1721760): wrapper: running run_atlas (--nthreads 6)
[2026-01-23 22:33:44] Arguments: --nthreads 6
[2026-01-23 22:33:44] Threads: 6
[2026-01-23 22:33:44] Checking for CVMFS
[2026-01-23 22:33:44] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-23 22:34:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-23 22:34:04] Running cvmfs_config stat atlas.cern.ch
[2026-01-23 22:34:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-23 22:34:05] 2.13.3.0 1625780 397 54532 155431 1 50 13335126 20971520 929 130560 0 316106 99.998 5536 6 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2026-01-23 22:34:05] CVMFS is ok
[2026-01-23 22:34:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-23 22:34:05] Checking for apptainer binary...
[2026-01-23 22:34:05] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-23 22:34:05] Running /usr/bin/apptainer --version
[2026-01-23 22:34:05] apptainer version 1.4.5-2.el9
[2026-01-23 22:34:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-23 22:34:05] testio005
[2026-01-23 22:34:05] apptainer works
[2026-01-23 22:34:05] Set ATHENA_PROC_NUMBER=6
[2026-01-23 22:34:05] Set ATHENA_CORE_NUMBER=6
[2026-01-23 22:34:05] Starting ATLAS job with PandaID=6978169566
[2026-01-23 22:34:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-24 00:16:29]  *** The last 200 lines of the pilot log: ***
[2026-01-24 00:16:29]  lfn=log.48310670._004726.job.log.tgz.1
[2026-01-24 00:16:29]  mtime=0
[2026-01-24 00:16:29]  protocol_id=None
[2026-01-24 00:16:29]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-24 00:16:29]  replicas=None
[2026-01-24 00:16:29]  scope=mc23_13p6TeV
[2026-01-24 00:16:29]  status=None
[2026-01-24 00:16:29]  status_code=0
[2026-01-24 00:16:29]  storage_token=
[2026-01-24 00:16:29]  surl=/var/lib/boinc/slots/3/PanDA_Pilot-6978169566/log.48310670._004726.job.log.tgz.1
[2026-01-24 00:16:29]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e1/ef/log.48310670._004726.job.log.tgz.1
[2026-01-24 00:16:29]  workdir=None
[2026-01-24 00:16:29] ]
[2026-01-24 00:16:29] 2026-01-23 15:15:41,845 | INFO     | transferring file log.48310670._004726.job.log.tgz.1 from /var/lib/boinc/slots/3/PanDA_Pilot-6978169566/log.48310670._004726.job.log.tgz.1 to /var/lib/boinc/slots/
[2026-01-24 00:16:29] 2026-01-23 15:15:41,845 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/3/PanDA_Pilot-6978169566/log.48310670._004726.job.log.tgz.1 /var/lib/boinc/slots/3/log.48310670._004726.job
[2026-01-24 00:16:29] 2026-01-23 15:15:41,862 | INFO     | adding to output.list: log.48310670._004726.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e1/ef/log.48310670._004726.job.log.tg
[2026-01-24 00:16:29] 2026-01-23 15:15:41,862 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-24 00:16:29] 2026-01-23 15:15:41,862 | INFO     | summary of transferred files:
[2026-01-24 00:16:29] 2026-01-23 15:15:41,863 | INFO     |  -- lfn=log.48310670._004726.job.log.tgz.1, status_code=0, status=transferred
[2026-01-24 00:16:29] 2026-01-23 15:15:41,863 | INFO     | stage-out finished correctly
[2026-01-24 00:16:29] 2026-01-23 15:15:43,555 | INFO     | time since job start (6004s) is within the limit (349056.0s)
[2026-01-24 00:16:29] 2026-01-23 15:15:44,034 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-24 00:16:29] 2026-01-23 15:15:44,129 | WARNING  | process 1730511 can no longer be monitored (due to stat problems) - aborting
[2026-01-24 00:16:29] 2026-01-23 15:15:44,129 | INFO     | using path: /var/lib/boinc/slots/3/PanDA_Pilot-6978169566/memory_monitor_summary.json (trf name=prmon)
[2026-01-24 00:16:29] 2026-01-23 15:15:44,233 | INFO     | number of running child processes to parent process 1730511: 1
[2026-01-24 00:16:29] 2026-01-23 15:15:44,233 | INFO     | maximum number of monitored processes: 6
[2026-01-24 00:16:29] 2026-01-23 15:15:44,677 | INFO     | PID=1725903 has CPU usage=6.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-24 00:16:29] 2026-01-23 15:15:44,677 | INFO     | .. there are 2 such processes running
[2026-01-24 00:16:29] 2026-01-23 15:15:45,678 | INFO     | time since job start (6006s) is within the limit (349056.0s)
[2026-01-24 00:16:29] 2026-01-23 15:15:46,628 | INFO     | job 6978169566 has state=finished
[2026-01-24 00:16:29] 2026-01-23 15:15:46,628 | INFO     | preparing for final server update for job 6978169566 in state='finished'
[2026-01-24 00:16:29] 2026-01-23 15:15:46,628 | INFO     | reading metadata from: /var/lib/boinc/slots/3/PanDA_Pilot-6978169566/jobReport.json
[2026-01-24 00:16:29] 2026-01-23 15:15:46,630 | INFO     | added worker_node to metadata from /var/lib/boinc/slots/3/workernode_map.json
[2026-01-24 00:16:29] 2026-01-23 15:15:46,630 | INFO     | this job has now completed (state=finished)
[2026-01-24 00:16:29] 2026-01-23 15:15:46,631 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-24 00:16:29] 2026-01-23 15:15:46,631 | INFO     | log transfer has been attempted: DONE
[2026-01-24 00:16:29] 2026-01-23 15:15:46,631 | INFO     | job 6978169566 has finished - writing final server update
[2026-01-24 00:16:29] 2026-01-23 15:15:46,631 | INFO     | total number of processed events: 400 (read)
[2026-01-24 00:16:29] 2026-01-23 15:15:46,634 | INFO     | using path: /var/lib/boinc/slots/3/PanDA_Pilot-6978169566/memory_monitor_summary.json (trf name=prmon)
[2026-01-24 00:16:29] 2026-01-23 15:15:46,635 | INFO     | extracted standard info from prmon json
[2026-01-24 00:16:29] 2026-01-23 15:15:46,635 | INFO     | extracted standard memory fields from prmon json
[2026-01-24 00:16:29] 2026-01-23 15:15:46,635 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-24 00:16:29] 2026-01-23 15:15:46,635 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-24 00:16:29] 2026-01-23 15:15:46,636 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-24 00:16:29] 2026-01-23 15:15:46,637 | INFO     | fitting pss+swap vs Time
[2026-01-24 00:16:29] 2026-01-23 15:15:46,638 | INFO     | sum of square deviations: 233604338.10989055
[2026-01-24 00:16:29] 2026-01-23 15:15:46,638 | INFO     | sum of deviations: -1630628624.428571
[2026-01-24 00:16:29] 2026-01-23 15:15:46,638 | INFO     | mean x: 1769178411.098901
[2026-01-24 00:16:29] 2026-01-23 15:15:46,638 | INFO     | mean y: 2459547.714285714
[2026-01-24 00:16:29] 2026-01-23 15:15:46,638 | INFO     | intersect: 12351857603.420954
[2026-01-24 00:16:29] 2026-01-23 15:15:46,638 | INFO     | chi2: 0.01871815837667027
[2026-01-24 00:16:29] 2026-01-23 15:15:46,639 | INFO     | current memory leak: -6.98 B/s (using 91 data points, chi2=0.02)
[2026-01-24 00:16:29] 2026-01-23 15:15:46,639 | INFO     | could have reported an average CPU frequency of 3292 MHz (7 samples)
[2026-01-24 00:16:29] 2026-01-23 15:15:46,639 | INFO     | ..............................
[2026-01-24 00:16:29] 2026-01-23 15:15:46,639 | INFO     | . Timing measurements:
[2026-01-24 00:16:29] 2026-01-23 15:15:46,639 | INFO     | . get job = 0 s
[2026-01-24 00:16:29] 2026-01-23 15:15:46,639 | INFO     | . initial setup = 26 s
[2026-01-24 00:16:29] 2026-01-23 15:15:46,639 | INFO     | . payload setup = 6 s
[2026-01-24 00:16:29] 2026-01-23 15:15:46,639 | INFO     | . stage-in = 0 s
[2026-01-24 00:16:29] 2026-01-23 15:15:46,639 | INFO     | . payload execution = 5980 s
[2026-01-24 00:16:29] 2026-01-23 15:15:46,640 | INFO     | . stage-out = 0 s
[2026-01-24 00:16:29] 2026-01-23 15:15:46,640 | INFO     | . log creation = 0 s
[2026-01-24 00:16:29] 2026-01-23 15:15:46,640 | INFO     | ..............................
[2026-01-24 00:16:29] 2026-01-23 15:15:46,797 | INFO     | 
[2026-01-24 00:16:29] 2026-01-23 15:15:46,797 | INFO     | job summary report
[2026-01-24 00:16:29] 2026-01-23 15:15:46,797 | INFO     | --------------------------------------------------
[2026-01-24 00:16:29] 2026-01-23 15:15:46,797 | INFO     | PanDA job id: 6978169566
[2026-01-24 00:16:29] 2026-01-23 15:15:46,797 | INFO     | task id: 48310670
[2026-01-24 00:16:29] 2026-01-23 15:15:46,797 | INFO     | errors: (none)
[2026-01-24 00:16:29] 2026-01-23 15:15:46,797 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-24 00:16:29] 2026-01-23 15:15:46,797 | INFO     | pilot state: finished 
[2026-01-24 00:16:29] 2026-01-23 15:15:46,797 | INFO     | transexitcode: 0
[2026-01-24 00:16:29] 2026-01-23 15:15:46,797 | INFO     | exeerrorcode: 0
[2026-01-24 00:16:29] 2026-01-23 15:15:46,798 | INFO     | exeerrordiag: 
[2026-01-24 00:16:29] 2026-01-23 15:15:46,798 | INFO     | exitcode: 0
[2026-01-24 00:16:29] 2026-01-23 15:15:46,798 | INFO     | exitmsg: OK
[2026-01-24 00:16:29] 2026-01-23 15:15:46,798 | INFO     | cpuconsumptiontime: 33020 s
[2026-01-24 00:16:29] 2026-01-23 15:15:46,798 | INFO     | nevents: 400
[2026-01-24 00:16:29] 2026-01-23 15:15:46,798 | INFO     | neventsw: 0
[2026-01-24 00:16:29] 2026-01-23 15:15:46,798 | INFO     | pid: 1730511
[2026-01-24 00:16:29] 2026-01-23 15:15:46,798 | INFO     | pgrp: 1730511
[2026-01-24 00:16:29] 2026-01-23 15:15:46,798 | INFO     | corecount: 6
[2026-01-24 00:16:29] 2026-01-23 15:15:46,798 | INFO     | event service: False
[2026-01-24 00:16:29] 2026-01-23 15:15:46,798 | INFO     | sizes: {0: 2284243, 11: 2284243, 5990: 2311059, 5992: 2320057, 5994: 2320113, 5996: 2320307}
[2026-01-24 00:16:29] 2026-01-23 15:15:46,798 | INFO     | --------------------------------------------------
[2026-01-24 00:16:29] 2026-01-23 15:15:46,798 | INFO     | 
[2026-01-24 00:16:29] 2026-01-23 15:15:46,799 | INFO     | executing command: ls -lF /var/lib/boinc/slots/3
[2026-01-24 00:16:29] 2026-01-23 15:15:46,817 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-24 00:16:29] 2026-01-23 15:15:46,817 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-24 00:16:29] 2026-01-23 15:15:46,817 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-24 00:16:29] 2026-01-23 15:15:46,817 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-24 00:16:29] 2026-01-23 15:15:46,817 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-24 00:16:29] 2026-01-23 15:15:46,817 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-24 00:16:29] 2026-01-23 15:15:46,818 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-24 00:16:29] 2026-01-23 15:15:46,818 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-24 00:16:29] 2026-01-23 15:15:46,818 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-24 00:16:29] 2026-01-23 15:15:46,818 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-24 00:16:29] 2026-01-23 15:15:46,818 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-24 00:16:29] 2026-01-23 15:15:46,818 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-24 00:16:29] 2026-01-23 15:15:46,818 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-24 00:16:29] 2026-01-23 15:15:46,818 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-24 00:16:29] 2026-01-23 15:15:46,818 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-24 00:16:29] 2026-01-23 15:15:46,818 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-24 00:16:29] 2026-01-23 15:15:46,818 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-24 00:16:29] 2026-01-23 15:15:46,818 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-24 00:16:29] 2026-01-23 15:15:46,818 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-24 00:16:29] 2026-01-23 15:15:46,819 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-24 00:16:29] 2026-01-23 15:15:46,819 | INFO     | job 6978169566 has completed (purged errors)
[2026-01-24 00:16:29] 2026-01-23 15:15:46,819 | INFO     | overall cleanup function is called
[2026-01-24 00:16:29] 2026-01-23 15:15:47,826 | INFO     | --- collectZombieJob: --- 10, [1730511]
[2026-01-24 00:16:29] 2026-01-23 15:15:47,826 | INFO     | zombie collector waiting for pid 1730511
[2026-01-24 00:16:29] 2026-01-23 15:15:47,826 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-24 00:16:29] 2026-01-23 15:15:47,826 | INFO     | collected zombie processes
[2026-01-24 00:16:29] 2026-01-23 15:15:47,826 | INFO     | will attempt to kill all subprocesses of pid=1730511
[2026-01-24 00:16:29] 2026-01-23 15:15:47,921 | INFO     | process IDs to be killed: [1730511] (in reverse order)
[2026-01-24 00:16:29] 2026-01-23 15:15:47,966 | WARNING  | found no corresponding commands to process id(s)
[2026-01-24 00:16:29] 2026-01-23 15:15:47,966 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-24 00:16:29] 2026-01-23 15:15:47,969 | INFO     | did not find any defunct processes belonging to 1730511
[2026-01-24 00:16:29] 2026-01-23 15:15:47,972 | INFO     | did not find any defunct processes belonging to 1730511
[2026-01-24 00:16:29] 2026-01-23 15:15:47,973 | INFO     | ready for new job
[2026-01-24 00:16:29] 2026-01-23 15:15:47,973 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-24 00:16:29] 2026-01-23 15:15:47,974 | INFO     | **************************************
[2026-01-24 00:16:29] 2026-01-23 15:15:47,974 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-24 00:16:29] 2026-01-23 15:15:47,974 | INFO     | **************************************
[2026-01-24 00:16:29] 2026-01-23 15:15:47,974 | INFO     | 
[2026-01-24 00:16:29] 2026-01-23 15:15:47,975 | INFO     | architecture information:
[2026-01-24 00:16:29] 2026-01-23 15:15:47,976 | INFO     | executing command: cat /etc/os-release
[2026-01-24 00:16:29] 2026-01-23 15:15:47,990 | INFO     | cat /etc/os-release:
[2026-01-24 00:16:29] NAME="CentOS Linux"
[2026-01-24 00:16:29] VERSION="7 (Core)"
[2026-01-24 00:16:29] ID="centos"
[2026-01-24 00:16:29] ID_LIKE="rhel fedora"
[2026-01-24 00:16:29] VERSION_ID="7"
[2026-01-24 00:16:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-24 00:16:29] ANSI_COLOR="0;31"
[2026-01-24 00:16:29] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-24 00:16:29] HOME_URL="https://www.centos.org/"
[2026-01-24 00:16:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-24 00:16:29] 
[2026-01-24 00:16:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-24 00:16:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-24 00:16:29] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-24 00:16:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-24 00:16:29] 
[2026-01-24 00:16:29] 2026-01-23 15:15:47,990 | INFO     | **************************************
[2026-01-24 00:16:29] 2026-01-23 15:15:48,493 | INFO     | executing command: df -mP /var/lib/boinc/slots/3
[2026-01-24 00:16:29] 2026-01-23 15:15:48,507 | INFO     | sufficient remaining disk space (96115621888 B)
[2026-01-24 00:16:29] 2026-01-23 15:15:48,507 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-24 00:16:29] 2026-01-23 15:15:48,507 | INFO     | current server update state: UPDATING_FINAL
[2026-01-24 00:16:29] 2026-01-23 15:15:48,507 | INFO     | update_server=False
[2026-01-24 00:16:29] 2026-01-23 15:15:48,507 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-24 00:16:29] 2026-01-23 15:15:48,508 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-24 00:16:29] 2026-01-23 15:15:48,508 | INFO     | aborting loop
[2026-01-24 00:16:29] 2026-01-23 15:15:48,508 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-24 00:16:29] 2026-01-23 15:15:48,583 | INFO     | [monitor] cgroup control has ended
[2026-01-24 00:16:29] 2026-01-23 15:15:48,973 | INFO     | all job control threads have been joined
[2026-01-24 00:16:29] 2026-01-23 15:15:49,214 | INFO     | all payload control threads have been joined
[2026-01-24 00:16:29] 2026-01-23 15:15:49,513 | INFO     | [job] retrieve thread has finished
[2026-01-24 00:16:29] 2026-01-23 15:15:49,513 | INFO     | [job] job monitor thread has finished
[2026-01-24 00:16:29] 2026-01-23 15:15:49,513 | INFO     | [job] queue monitor thread has finished
[2026-01-24 00:16:29] 2026-01-23 15:15:49,551 | INFO     | [payload] validate_pre thread has finished
[2026-01-24 00:16:29] 2026-01-23 15:15:49,586 | INFO     | all data control threads have been joined
[2026-01-24 00:16:29] 2026-01-23 15:15:49,653 | INFO     | [job] create_data_payload thread has finished
[2026-01-24 00:16:29] 2026-01-23 15:15:49,739 | INFO     | [data] copytool_in thread has finished
[2026-01-24 00:16:29] 2026-01-23 15:15:49,939 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-24 00:16:29] 2026-01-23 15:15:49,978 | INFO     | [job] control thread has finished
[2026-01-24 00:16:29] 2026-01-23 15:15:50,122 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-24 00:16:29] 2026-01-23 15:15:50,154 | INFO     | [payload] execute_payloads thread has finished
[2026-01-24 00:16:29] 2026-01-23 15:15:50,219 | INFO     | [payload] control thread has finished
[2026-01-24 00:16:29] 2026-01-23 15:15:50,336 | INFO     | [payload] failed_post thread has finished
[2026-01-24 00:16:29] 2026-01-23 15:15:50,591 | INFO     | [data] control thread has finished
[2026-01-24 00:16:29] 2026-01-23 15:15:50,738 | INFO     | [job] validate thread has finished
[2026-01-24 00:16:29] 2026-01-23 15:15:50,852 | INFO     | [payload] validate_post thread has finished
[2026-01-24 00:16:29] 2026-01-23 15:15:51,944 | INFO     | [data] copytool_out thread has finished
[2026-01-24 00:16:29] 2026-01-23 15:15:54,127 | INFO     | [data] queue_monitor thread has finished
[2026-01-24 00:16:29] 2026-01-23 15:15:58,766 | INFO     | job.realtimelogging is not enabled
[2026-01-24 00:16:29] 2026-01-23 15:15:59,771 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-24 00:16:29] 2026-01-23 15:16:01,434 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139984485988160)>', '<ExcThread(monitor, started 139984115853056)>']
[2026-01-24 00:16:29] 2026-01-23 15:16:06,459 | INFO     | all workflow threads have been joined
[2026-01-24 00:16:29] 2026-01-23 15:16:06,459 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-24 00:16:29] 2026-01-23 15:16:06,459 | INFO     | traces error code: 0
[2026-01-24 00:16:29] 2026-01-23 15:16:06,459 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-24 00:16:29] 2026-01-23 15:16:29,232 | INFO     | PID=1725903 has CPU usage=0.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-24 00:16:29] 2026-01-23 15:16:29,232 | INFO     | .. there are 2 such processes running
[2026-01-24 00:16:29] 2026-01-23 15:16:29,233 | INFO     | found 0 job(s) in 20 queues
[2026-01-24 00:16:29] 2026-01-23 15:16:29,233 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-24 00:16:29] 2026-01-23 15:16:29,233 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-24 00:16:29] 2026-01-23 15:16:29,233 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-24 00:16:29] 2026-01-23 15:16:29,233 | CRITICAL | thread 'MainThread' is not alive
[2026-01-24 00:16:29] 2026-01-23 15:16:29,233 | INFO     | [monitor] control thread has ended
[2026-01-24 00:16:29] 2026-01-23 15:16:29,363 [wrapper] ==== pilot stdout END ====
[2026-01-24 00:16:29] 2026-01-23 15:16:29,366 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-24 00:16:29] 2026-01-23 15:16:29,369 [wrapper] pilotpid: 1725903
[2026-01-24 00:16:29] 2026-01-23 15:16:29,371 [wrapper] Pilot exit status: 0
[2026-01-24 00:16:29] 2026-01-23 15:16:29,382 [wrapper] pandaids: 6978169566
[2026-01-24 00:16:29] 2026-01-23 15:16:29,416 [wrapper] cleanup supervisor_pilot 1749066 1725904
[2026-01-24 00:16:29] 2026-01-23 15:16:29,419 [wrapper] Test setup, not cleaning
[2026-01-24 00:16:29] 2026-01-23 15:16:29,421 [wrapper] apfmon messages muted
[2026-01-24 00:16:29] 2026-01-23 15:16:29,424 [wrapper] ==== wrapper stdout END ====
[2026-01-24 00:16:29] 2026-01-23 15:16:29,426 [wrapper] ==== wrapper stderr END ====
[2026-01-24 00:16:29]  *** Error codes and diagnostics ***
[2026-01-24 00:16:29]     "exeErrorCode": 0,
[2026-01-24 00:16:29]     "exeErrorDiag": "",
[2026-01-24 00:16:29]     "pilotErrorCode": 0,
[2026-01-24 00:16:29]     "pilotErrorDiag": "",
[2026-01-24 00:16:29]  *** Listing of results directory ***
[2026-01-24 00:16:29] total 670676
[2026-01-24 00:16:29] -rwx------. 1 boinc boinc     36322 Jan 23 14:19 runpilot2-wrapper.sh
[2026-01-24 00:16:29] -rw-r--r--. 1 boinc boinc      5111 Jan 23 14:20 queuedata.json
[2026-01-24 00:16:29] -rw-r--r--. 1 boinc boinc    584422 Jan 23 14:20 pilot3.tar.gz
[2026-01-24 00:16:29] -rw-r--r--. 1 boinc boinc       100 Jan 23 22:33 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-24 00:16:29] -rwxr-xr-x. 1 boinc boinc      7986 Jan 23 22:33 run_atlas
[2026-01-24 00:16:29] -rw-r--r--. 1 boinc boinc       105 Jan 23 22:33 job.xml
[2026-01-24 00:16:29] -rw-r--r--. 1 boinc boinc      9356 Jan 23 22:33 init_data.xml
[2026-01-24 00:16:29] -rw-r--r--. 2 boinc boinc 502188596 Jan 23 22:33 EVNT.48310665._000095.pool.root.1
[2026-01-24 00:16:29] -rw-r--r--. 2 boinc boinc     15845 Jan 23 22:33 start_atlas.sh
[2026-01-24 00:16:29] drwxrwx--x. 2 boinc boinc        68 Jan 23 22:33 shared
[2026-01-24 00:16:29] -rw-r--r--. 2 boinc boinc    597753 Jan 23 22:33 input.tar.gz
[2026-01-24 00:16:29] -rw-r--r--. 1 boinc boinc         0 Jan 23 22:33 boinc_lockfile
[2026-01-24 00:16:29] -rw-r--r--. 1 boinc boinc      2524 Jan 23 22:34 pandaJob.out
[2026-01-24 00:16:29] -rw-------. 1 boinc boinc   1004198 Jan 23 22:35 agis_schedconf.cvmfs.json
[2026-01-24 00:16:29] -rw-------. 1 boinc boinc   1516246 Jan 23 22:35 agis_ddmendpoints.agis.ALL.json
[2026-01-24 00:16:29] -rw-------. 1 boinc boinc       424 Jan 23 22:35 workernode_map.json
[2026-01-24 00:16:29] drwx------. 5 boinc boinc      4096 Jan 23 22:35 pilot3
[2026-01-24 00:16:29] -rw-------. 1 boinc boinc 178240417 Jan 24 00:15 HITS.48310670._004726.pool.root.1
[2026-01-24 00:16:29] -rw-------. 1 boinc boinc      1023 Jan 24 00:15 memory_monitor_summary.json
[2026-01-24 00:16:29] -rw-r--r--. 1 boinc boinc       530 Jan 24 00:15 boinc_task_state.xml
[2026-01-24 00:16:29] -rw-------. 1 boinc boinc    331388 Jan 24 00:15 log.48310670._004726.job.log.tgz.1
[2026-01-24 00:16:29] -rw-------. 1 boinc boinc      6303 Jan 24 00:15 heartbeat.json
[2026-01-24 00:16:29] -rw-r--r--. 1 boinc boinc        27 Jan 24 00:16 wrapper_checkpoint.txt
[2026-01-24 00:16:29] -rw-r--r--. 1 boinc boinc      8192 Jan 24 00:16 boinc_mmap_file
[2026-01-24 00:16:29] -rw-------. 1 boinc boinc        95 Jan 24 00:16 pilot_heartbeat.json
[2026-01-24 00:16:29] -rw-------. 1 boinc boinc       892 Jan 24 00:16 pilotlog.txt
[2026-01-24 00:16:29] -rw-------. 1 boinc boinc    877098 Jan 24 00:16 log.48310670._004726.job.log.1
[2026-01-24 00:16:29] -rw-------. 1 boinc boinc       357 Jan 24 00:16 output.list
[2026-01-24 00:16:29] -rw-r--r--. 1 boinc boinc       620 Jan 24 00:16 runtime_log
[2026-01-24 00:16:29] -rw-------. 1 boinc boinc   1228800 Jan 24 00:16 result.tar.gz
[2026-01-24 00:16:29] -rw-r--r--. 1 boinc boinc      8774 Jan 24 00:16 runtime_log.err
[2026-01-24 00:16:29] -rw-------. 1 boinc boinc       644 Jan 24 00:16 D4aKDmukO38nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmqz1KDm6q1bam.diag
[2026-01-24 00:16:29] -rw-r--r--. 1 boinc boinc     21379 Jan 24 00:16 stderr.txt
[2026-01-24 00:16:29] HITS file was successfully produced:
[2026-01-24 00:16:29] -rw-------. 1 boinc boinc 178240417 Jan 24 00:15 shared/HITS.pool.root.1
[2026-01-24 00:16:29]  *** Contents of shared directory: ***
[2026-01-24 00:16:29] total 666284
[2026-01-24 00:16:29] -rw-r--r--. 2 boinc boinc 502188596 Jan 23 22:33 ATLAS.root_0
[2026-01-24 00:16:29] -rw-r--r--. 2 boinc boinc     15845 Jan 23 22:33 start_atlas.sh
[2026-01-24 00:16:29] -rw-r--r--. 2 boinc boinc    597753 Jan 23 22:33 input.tar.gz
[2026-01-24 00:16:29] -rw-------. 1 boinc boinc 178240417 Jan 24 00:15 HITS.pool.root.1
[2026-01-24 00:16:29] -rw-------. 1 boinc boinc   1228800 Jan 24 00:16 result.tar.gz
00:16:31 (1721760): run_atlas exited; CPU time 33074.675774
00:16:31 (1721760): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN