Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
08:27:27 (3910249): wrapper (7.7.26015): starting
08:27:27 (3910249): wrapper: running run_atlas (--nthreads 10)
[2026-01-23 08:27:27] Arguments: --nthreads 10
[2026-01-23 08:27:27] Threads: 10
[2026-01-23 08:27:27] Checking for CVMFS
[2026-01-23 08:27:28] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-23 08:27:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-23 08:27:28] Running cvmfs_config stat atlas.cern.ch
[2026-01-23 08:27:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-23 08:27:29] 2.13.3.0 9438 113607 231984 155431 1 1062 27084913 40960001 38679 16776704 0 1388939952 99.735 985674318 48409 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-23 08:27:29] CVMFS is ok
[2026-01-23 08:27:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-23 08:27:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-23 08:27:29] Further information can be found at the LHC@home message board.
[2026-01-23 08:27:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-23 08:27:29] Checking for apptainer binary...
[2026-01-23 08:27:29] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-23 08:27:29] Running /usr/bin/apptainer --version
[2026-01-23 08:27:29] apptainer version 1.4.5-2.el9
[2026-01-23 08:27:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-23 08:27:30] c8-7-3.aglt2.org
[2026-01-23 08:27:30] apptainer works
[2026-01-23 08:27:30] Set ATHENA_PROC_NUMBER=10
[2026-01-23 08:27:30] Set ATHENA_CORE_NUMBER=10
[2026-01-23 08:27:30] Starting ATLAS job with PandaID=6970291365
[2026-01-23 08:27:30] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-23 09:18:16]  *** The last 200 lines of the pilot log: ***
[2026-01-23 09:18:16] 2026-01-23 14:17:11,428 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-23 09:18:16] 2026-01-23 14:17:11,810 | INFO     | time since job start (2903s) is within the limit (349056.0s)
[2026-01-23 09:18:16] 2026-01-23 14:17:13,818 | INFO     | time since job start (2905s) is within the limit (349056.0s)
[2026-01-23 09:18:16] 2026-01-23 14:17:13,933 | INFO     | monitor loop #212: job 0:6970291365 is in state 'finished'
[2026-01-23 09:18:16] 2026-01-23 14:17:13,933 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-23 09:18:16] 2026-01-23 14:17:15,826 | INFO     | time since job start (2907s) is within the limit (349056.0s)
[2026-01-23 09:18:16] 2026-01-23 14:17:16,438 | INFO     | monitor loop #213: job 0:6970291365 is in state 'finished'
[2026-01-23 09:18:16] 2026-01-23 14:17:16,438 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-23 09:18:16] 2026-01-23 14:17:17,833 | INFO     | time since job start (2909s) is within the limit (349056.0s)
[2026-01-23 09:18:16] 2026-01-23 14:17:17,833 | INFO     | 2916s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2026-01-23 09:18:16] 2026-01-23 14:17:18,964 | INFO     | monitor loop #214: job 0:6970291365 is in state 'finished'
[2026-01-23 09:18:16] 2026-01-23 14:17:18,964 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-23 09:18:16] 2026-01-23 14:17:19,840 | INFO     | time since job start (2911s) is within the limit (349056.0s)
[2026-01-23 09:18:16] 2026-01-23 14:17:21,470 | INFO     | monitor loop #215: job 0:6970291365 is in state 'finished'
[2026-01-23 09:18:16] 2026-01-23 14:17:21,470 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-23 09:18:16] 2026-01-23 14:17:21,854 | INFO     | time since job start (2913s) is within the limit (349056.0s)
[2026-01-23 09:18:16] 2026-01-23 14:17:23,861 | INFO     | time since job start (2915s) is within the limit (349056.0s)
[2026-01-23 09:18:16] 2026-01-23 14:17:23,975 | INFO     | monitor loop #216: job 0:6970291365 is in state 'finished'
[2026-01-23 09:18:16] 2026-01-23 14:17:23,975 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-23 09:18:16] 2026-01-23 14:17:25,868 | INFO     | time since job start (2917s) is within the limit (349056.0s)
[2026-01-23 09:18:16] 2026-01-23 14:17:26,482 | INFO     | monitor loop #217: job 0:6970291365 is in state 'finished'
[2026-01-23 09:18:16] 2026-01-23 14:17:26,518 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-23 09:18:16] 2026-01-23 14:17:27,875 | INFO     | time since job start (2919s) is within the limit (349056.0s)
[2026-01-23 09:18:16] 2026-01-23 14:17:29,023 | INFO     | monitor loop #218: job 0:6970291365 is in state 'finished'
[2026-01-23 09:18:16] 2026-01-23 14:17:29,023 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-23 09:18:16] 2026-01-23 14:17:29,976 | INFO     | time since job start (2921s) is within the limit (349056.0s)
[2026-01-23 09:18:16] 2026-01-23 14:17:31,416 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-23 09:18:16] 2026-01-23 14:17:31,534 | INFO     | monitor loop #219: job 0:6970291365 is in state 'finished'
[2026-01-23 09:18:16] 2026-01-23 14:17:31,534 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-23 09:18:16] 2026-01-23 14:17:31,755 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3657.8477343750023
[2026-01-23 09:18:16] 2026-01-23 14:17:31,763 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6970291365/memory_monitor_summary.json (trf name=prmon)
[2026-01-23 09:18:16] 2026-01-23 14:17:31,763 | INFO     | extracted standard info from prmon json
[2026-01-23 09:18:16] 2026-01-23 14:17:31,763 | INFO     | extracted standard memory fields from prmon json
[2026-01-23 09:18:16] 2026-01-23 14:17:31,763 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-23 09:18:16] 2026-01-23 14:17:31,763 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-23 09:18:16] 2026-01-23 14:17:31,763 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-23 09:18:16] 2026-01-23 14:17:31,764 | INFO     | fitting pss+swap vs Time
[2026-01-23 09:18:16] 2026-01-23 14:17:31,840 | INFO     | sum of square deviations: 17007687.263157893
[2026-01-23 09:18:16] 2026-01-23 14:17:31,840 | INFO     | sum of deviations: 1065732698.4210527
[2026-01-23 09:18:16] 2026-01-23 14:17:31,840 | INFO     | mean x: 1769176510.5789473
[2026-01-23 09:18:16] 2026-01-23 14:17:31,840 | INFO     | mean y: 2600718.0263157897
[2026-01-23 09:18:16] 2026-01-23 14:17:31,840 | INFO     | intersect: -110857225631.60048
[2026-01-23 09:18:16] 2026-01-23 14:17:31,840 | INFO     | chi2: 0.06678698918296472
[2026-01-23 09:18:16] 2026-01-23 14:17:31,840 | INFO     | current memory leak: 62.66 B/s (using 38 data points, chi2=0.07)
[2026-01-23 09:18:16] 2026-01-23 14:17:31,840 | INFO     | could have reported an average CPU frequency of 3768 MHz (5 samples)
[2026-01-23 09:18:16] 2026-01-23 14:17:31,841 | INFO     | ..............................
[2026-01-23 09:18:16] 2026-01-23 14:17:31,841 | INFO     | . Timing measurements:
[2026-01-23 09:18:16] 2026-01-23 14:17:31,841 | INFO     | . get job = 0 s
[2026-01-23 09:18:16] 2026-01-23 14:17:31,841 | INFO     | . initial setup = 7 s
[2026-01-23 09:18:16] 2026-01-23 14:17:31,841 | INFO     | . payload setup = 54 s
[2026-01-23 09:18:16] 2026-01-23 14:17:31,841 | INFO     | . stage-in = 0 s
[2026-01-23 09:18:16] 2026-01-23 14:17:31,841 | INFO     | . payload execution = 2768 s
[2026-01-23 09:18:16] 2026-01-23 14:17:31,841 | INFO     | . stage-out = 1 s
[2026-01-23 09:18:16] 2026-01-23 14:17:31,841 | INFO     | . log creation = 0 s
[2026-01-23 09:18:16] 2026-01-23 14:17:31,841 | INFO     | ..............................
[2026-01-23 09:18:16] 2026-01-23 14:17:31,878 | INFO     | 
[2026-01-23 09:18:16] 2026-01-23 14:17:31,878 | INFO     | job summary report
[2026-01-23 09:18:16] 2026-01-23 14:17:31,878 | INFO     | --------------------------------------------------
[2026-01-23 09:18:16] 2026-01-23 14:17:31,878 | INFO     | PanDA job id: 6970291365
[2026-01-23 09:18:16] 2026-01-23 14:17:31,878 | INFO     | task id: 48215263
[2026-01-23 09:18:16] 2026-01-23 14:17:31,878 | INFO     | errors: (none)
[2026-01-23 09:18:16] 2026-01-23 14:17:31,878 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-23 09:18:16] 2026-01-23 14:17:31,878 | INFO     | pilot state: finished 
[2026-01-23 09:18:16] 2026-01-23 14:17:31,878 | INFO     | transexitcode: 0
[2026-01-23 09:18:16] 2026-01-23 14:17:31,878 | INFO     | exeerrorcode: 0
[2026-01-23 09:18:16] 2026-01-23 14:17:31,878 | INFO     | exeerrordiag: 
[2026-01-23 09:18:16] 2026-01-23 14:17:31,878 | INFO     | exitcode: 0
[2026-01-23 09:18:16] 2026-01-23 14:17:31,878 | INFO     | exitmsg: OK
[2026-01-23 09:18:16] 2026-01-23 14:17:31,878 | INFO     | cpuconsumptiontime: 15452 s
[2026-01-23 09:18:16] 2026-01-23 14:17:31,878 | INFO     | nevents: 400
[2026-01-23 09:18:16] 2026-01-23 14:17:31,878 | INFO     | neventsw: 0
[2026-01-23 09:18:16] 2026-01-23 14:17:31,878 | INFO     | pid: 3944137
[2026-01-23 09:18:16] 2026-01-23 14:17:31,878 | INFO     | pgrp: 3944137
[2026-01-23 09:18:16] 2026-01-23 14:17:31,878 | INFO     | corecount: 10
[2026-01-23 09:18:16] 2026-01-23 14:17:31,878 | INFO     | event service: False
[2026-01-23 09:18:16] 2026-01-23 14:17:31,878 | INFO     | sizes: {0: 2283725, 1: 2283980, 2: 2284008, 13: 2284008, 24: 2284064, 33: 2284354, 34: 2284538, 2826: 2309862, 2828: 2318860, 2830: 2318916, 2857: 2319142}
[2026-01-23 09:18:16] 2026-01-23 14:17:31,878 | INFO     | --------------------------------------------------
[2026-01-23 09:18:16] 2026-01-23 14:17:31,878 | INFO     | 
[2026-01-23 09:18:16] 2026-01-23 14:17:31,878 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-01-23 09:18:16] 2026-01-23 14:17:32,033 | INFO     | time since job start (2924s) is within the limit (349056.0s)
[2026-01-23 09:18:16] 2026-01-23 14:17:34,214 | INFO     | PID=3920985 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-23 09:18:16] 2026-01-23 14:17:34,214 | INFO     | .. there are 42 such processes running
[2026-01-23 09:18:16] 2026-01-23 14:17:35,214 | INFO     | time since job start (2927s) is within the limit (349056.0s)
[2026-01-23 09:18:16] 2026-01-23 14:17:37,220 | INFO     | time since job start (2929s) is within the limit (349056.0s)
[2026-01-23 09:18:16] 2026-01-23 14:17:39,225 | INFO     | time since job start (2931s) is within the limit (349056.0s)
[2026-01-23 09:18:16] 2026-01-23 14:17:41,230 | INFO     | time since job start (2933s) is within the limit (349056.0s)
[2026-01-23 09:18:16] 2026-01-23 14:17:42,722 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-23 09:18:16] 2026-01-23 14:17:42,722 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-23 09:18:16] 2026-01-23 14:17:42,722 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-23 09:18:16] 2026-01-23 14:17:42,722 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-23 09:18:16] 2026-01-23 14:17:42,722 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-23 09:18:16] 2026-01-23 14:17:42,722 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-23 09:18:16] 2026-01-23 14:17:42,722 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-23 09:18:16] 2026-01-23 14:17:42,722 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-23 09:18:16] 2026-01-23 14:17:42,723 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-23 09:18:16] 2026-01-23 14:17:42,723 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-23 09:18:16] 2026-01-23 14:17:42,723 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-23 09:18:16] 2026-01-23 14:17:42,723 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-23 09:18:16] 2026-01-23 14:17:42,723 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-23 09:18:16] 2026-01-23 14:17:42,723 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-23 09:18:16] 2026-01-23 14:17:42,723 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-23 09:18:16] 2026-01-23 14:17:42,723 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-23 09:18:16] 2026-01-23 14:17:42,723 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-23 09:18:16] 2026-01-23 14:17:42,723 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-23 09:18:16] 2026-01-23 14:17:42,723 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-23 09:18:16] 2026-01-23 14:17:42,723 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-23 09:18:16] 2026-01-23 14:17:42,723 | INFO     | job 6970291365 has completed (purged errors)
[2026-01-23 09:18:16] 2026-01-23 14:17:42,723 | INFO     | overall cleanup function is called
[2026-01-23 09:18:16] 2026-01-23 14:17:43,808 | INFO     | --- collectZombieJob: --- 10, [3944137]
[2026-01-23 09:18:16] 2026-01-23 14:17:43,808 | INFO     | zombie collector waiting for pid 3944137
[2026-01-23 09:18:16] 2026-01-23 14:17:43,808 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-23 09:18:16] 2026-01-23 14:17:43,808 | INFO     | collected zombie processes
[2026-01-23 09:18:16] 2026-01-23 14:17:43,808 | INFO     | will attempt to kill all subprocesses of pid=3944137
[2026-01-23 09:18:16] 2026-01-23 14:17:45,159 | INFO     | process IDs to be killed: [3944137] (in reverse order)
[2026-01-23 09:18:16] 2026-01-23 14:17:45,723 | WARNING  | found no corresponding commands to process id(s)
[2026-01-23 09:18:16] 2026-01-23 14:17:45,723 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-23 09:18:16] 2026-01-23 14:17:45,819 | INFO     | did not find any defunct processes belonging to 3944137
[2026-01-23 09:18:16] 2026-01-23 14:17:45,844 | INFO     | did not find any defunct processes belonging to 3944137
[2026-01-23 09:18:16] 2026-01-23 14:17:45,844 | INFO     | ready for new job
[2026-01-23 09:18:16] 2026-01-23 14:17:45,844 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-23 09:18:16] 2026-01-23 14:17:45,846 | INFO     | ***************************************
[2026-01-23 09:18:16] 2026-01-23 14:17:45,846 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-23 09:18:16] 2026-01-23 14:17:45,846 | INFO     | ***************************************
[2026-01-23 09:18:16] 2026-01-23 14:17:45,846 | INFO     | 
[2026-01-23 09:18:16] 2026-01-23 14:17:45,850 | INFO     | architecture information:
[2026-01-23 09:18:16] 2026-01-23 14:17:45,850 | INFO     | executing command: cat /etc/os-release
[2026-01-23 09:18:16] 2026-01-23 14:17:45,949 | INFO     | cat /etc/os-release:
[2026-01-23 09:18:16] NAME="CentOS Linux"
[2026-01-23 09:18:16] VERSION="7 (Core)"
[2026-01-23 09:18:16] ID="centos"
[2026-01-23 09:18:16] ID_LIKE="rhel fedora"
[2026-01-23 09:18:16] VERSION_ID="7"
[2026-01-23 09:18:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-23 09:18:16] ANSI_COLOR="0;31"
[2026-01-23 09:18:16] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-23 09:18:16] HOME_URL="https://www.centos.org/"
[2026-01-23 09:18:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-23 09:18:16] 
[2026-01-23 09:18:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-23 09:18:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-23 09:18:16] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-23 09:18:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-23 09:18:16] 
[2026-01-23 09:18:16] 2026-01-23 14:17:45,949 | INFO     | ***************************************
[2026-01-23 09:18:16] 2026-01-23 14:17:46,453 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-01-23 09:18:16] 2026-01-23 14:17:46,540 | INFO     | sufficient remaining disk space (166034669568 B)
[2026-01-23 09:18:16] 2026-01-23 14:17:46,540 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-23 09:18:16] 2026-01-23 14:17:46,546 | INFO     | current server update state: UPDATING_FINAL
[2026-01-23 09:18:16] 2026-01-23 14:17:46,546 | INFO     | update_server=False
[2026-01-23 09:18:16] 2026-01-23 14:17:46,546 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-23 09:18:16] 2026-01-23 14:17:46,724 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-23 09:18:16] 2026-01-23 14:17:46,742 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-23 09:18:16] 2026-01-23 14:17:46,742 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-23 09:18:16] 2026-01-23 14:17:46,742 | INFO     | will abort loop
[2026-01-23 09:18:16] 2026-01-23 14:17:46,864 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-23 09:18:16] 2026-01-23 14:17:47,041 | INFO     | all data control threads have been joined
[2026-01-23 09:18:16] 2026-01-23 14:17:47,314 | INFO     | all payload control threads have been joined
[2026-01-23 09:18:16] 2026-01-23 14:17:47,472 | INFO     | all job control threads have been joined
[2026-01-23 09:18:16] 2026-01-23 14:17:47,558 | INFO     | [job] retrieve thread has finished
[2026-01-23 09:18:16] 2026-01-23 14:17:47,709 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-23 09:18:16] 2026-01-23 14:17:47,744 | INFO     | [job] validate thread has finished
[2026-01-23 09:18:16] 2026-01-23 14:17:47,748 | INFO     | [job] job monitor thread has finished
[2026-01-23 09:18:16] 2026-01-23 14:17:47,770 | INFO     | [payload] failed_post thread has finished
[2026-01-23 09:18:16] 2026-01-23 14:17:48,047 | INFO     | [data] control thread has finished
[2026-01-23 09:18:16] 2026-01-23 14:17:48,250 | INFO     | [data] copytool_in thread has finished
[2026-01-23 09:18:16] 2026-01-23 14:17:48,263 | INFO     | [job] create_data_payload thread has finished
[2026-01-23 09:18:16] 2026-01-23 14:17:48,263 | INFO     | [payload] execute_payloads thread has finished
[2026-01-23 09:18:16] 2026-01-23 14:17:48,267 | INFO     | [payload] validate_pre thread has finished
[2026-01-23 09:18:16] 2026-01-23 14:17:48,320 | INFO     | [payload] control thread has finished
[2026-01-23 09:18:16] 2026-01-23 14:17:48,478 | INFO     | [job] control thread has finished
[2026-01-23 09:18:16] 2026-01-23 14:17:48,663 | INFO     | [payload] validate_post thread has finished
[2026-01-23 09:18:16] 2026-01-23 14:17:48,871 | INFO     | [data] copytool_out thread has finished
[2026-01-23 09:18:16] 2026-01-23 14:17:48,950 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-23 09:18:16] 2026-01-23 14:17:49,956 | INFO     | [job] queue monitor thread has finished
[2026-01-23 09:18:16] 2026-01-23 14:17:51,719 | INFO     | [data] queue_monitor thread has finished
[2026-01-23 09:18:16] 2026-01-23 14:17:53,045 | INFO     | [monitor] cgroup control has ended
[2026-01-23 09:18:16] 2026-01-23 14:17:56,819 | INFO     | job.realtimelogging is not enabled
[2026-01-23 09:18:16] 2026-01-23 14:17:57,829 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-23 09:18:16] 2026-01-23 14:17:58,756 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140275392272192)>', '<ExcThread(monitor, started 140274739164928)>']
[2026-01-23 09:18:16] 2026-01-23 14:18:03,782 | INFO     | all workflow threads have been joined
[2026-01-23 09:18:16] 2026-01-23 14:18:03,782 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-23 09:18:16] 2026-01-23 14:18:03,782 | INFO     | traces error code: 0
[2026-01-23 09:18:16] 2026-01-23 14:18:03,782 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-23 09:18:16] 2026-01-23 14:18:15,218 | INFO     | PID=3920985 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-23 09:18:16] 2026-01-23 14:18:15,219 | INFO     | .. there are 42 such processes running
[2026-01-23 09:18:16] 2026-01-23 14:18:15,219 | INFO     | found 0 job(s) in 20 queues
[2026-01-23 09:18:16] 2026-01-23 14:18:15,219 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-23 09:18:16] 2026-01-23 14:18:15,219 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-23 09:18:16] 2026-01-23 14:18:15,219 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-23 09:18:16] 2026-01-23 14:18:15,219 | INFO     | [monitor] control thread has ended
[2026-01-23 09:18:16] 2026-01-23 14:18:15,498 [wrapper] ==== pilot stdout END ====
[2026-01-23 09:18:16] 2026-01-23 14:18:15,528 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-23 09:18:16] 2026-01-23 14:18:15,542 [wrapper] pilotpid: 3920985
[2026-01-23 09:18:16] 2026-01-23 14:18:15,565 [wrapper] Pilot exit status: 0
[2026-01-23 09:18:16] 2026-01-23 14:18:15,653 [wrapper] pandaids: 6970291365
[2026-01-23 09:18:16] 2026-01-23 14:18:15,818 [wrapper] cleanup supervisor_pilot 4174450 3920986
[2026-01-23 09:18:16] 2026-01-23 14:18:15,875 [wrapper] Test setup, not cleaning
[2026-01-23 09:18:16] 2026-01-23 14:18:15,898 [wrapper] apfmon messages muted
[2026-01-23 09:18:16] 2026-01-23 14:18:15,923 [wrapper] ==== wrapper stdout END ====
[2026-01-23 09:18:16] 2026-01-23 14:18:15,935 [wrapper] ==== wrapper stderr END ====
[2026-01-23 09:18:16]  *** Error codes and diagnostics ***
[2026-01-23 09:18:16]     "exeErrorCode": 0,
[2026-01-23 09:18:16]     "exeErrorDiag": "",
[2026-01-23 09:18:16]     "pilotErrorCode": 0,
[2026-01-23 09:18:16]     "pilotErrorDiag": "",
[2026-01-23 09:18:16]  *** Listing of results directory ***
[2026-01-23 09:18:16] total 742960
[2026-01-23 09:18:16] -rw-r--r--. 1 boincer umatlas      5112 Jan 14 23:50 queuedata.json
[2026-01-23 09:18:16] -rw-r--r--. 1 boincer umatlas    579449 Jan 14 23:50 pilot3.tar.gz
[2026-01-23 09:18:16] -rwx------. 1 boincer umatlas     36322 Jan 14 23:51 runpilot2-wrapper.sh
[2026-01-23 09:18:16] -rw-r--r--. 1 boincer umatlas       100 Jan 23 08:27 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-23 09:18:16] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 23 08:27 run_atlas
[2026-01-23 09:18:16] -rw-r--r--. 1 boincer umatlas       105 Jan 23 08:27 job.xml
[2026-01-23 09:18:16] -rw-r--r--. 2 boincer umatlas 599416404 Jan 23 08:27 EVNT.32794306._001806.pool.root.1
[2026-01-23 09:18:16] -rw-r--r--. 2 boincer umatlas     15847 Jan 23 08:27 start_atlas.sh
[2026-01-23 09:18:16] drwxrwx--x. 2 boincer umatlas      4096 Jan 23 08:27 shared
[2026-01-23 09:18:16] -rw-r--r--. 2 boincer umatlas    592398 Jan 23 08:27 input.tar.gz
[2026-01-23 09:18:16] -rw-r--r--. 1 boincer umatlas         0 Jan 23 08:27 boinc_lockfile
[2026-01-23 09:18:16] -rw-r--r--. 1 boincer umatlas      2509 Jan 23 08:27 pandaJob.out
[2026-01-23 09:18:16] -rw-------. 1 boincer umatlas        57 Jan 23 08:27 setup.sh.local
[2026-01-23 09:18:16] -rw-------. 1 boincer umatlas   1004198 Jan 23 08:28 agis_schedconf.cvmfs.json
[2026-01-23 09:18:16] -rw-------. 1 boincer umatlas   1516246 Jan 23 08:28 agis_ddmendpoints.agis.ALL.json
[2026-01-23 09:18:16] drwx------. 5 boincer umatlas      4096 Jan 23 08:28 pilot3
[2026-01-23 09:18:16] -rw-r--r--. 1 boincer umatlas      7171 Jan 23 09:11 init_data.xml
[2026-01-23 09:18:16] -rw-------. 1 boincer umatlas 155944229 Jan 23 09:16 HITS.48215263._046351.pool.root.1
[2026-01-23 09:18:16] -rw-r--r--. 1 boincer umatlas       530 Jan 23 09:16 boinc_task_state.xml
[2026-01-23 09:18:16] -rw-------. 1 boincer umatlas      1047 Jan 23 09:16 memory_monitor_summary.json
[2026-01-23 09:18:16] -rw-------. 1 boincer umatlas    327582 Jan 23 09:17 log.48215263._046351.job.log.tgz.1
[2026-01-23 09:18:16] -rw-------. 1 boincer umatlas      7801 Jan 23 09:17 heartbeat.json
[2026-01-23 09:18:16] -rw-------. 1 boincer umatlas        95 Jan 23 09:17 pilot_heartbeat.json
[2026-01-23 09:18:16] -rw-r--r--. 1 boincer umatlas      8192 Jan 23 09:18 boinc_mmap_file
[2026-01-23 09:18:16] -rw-------. 1 boincer umatlas       823 Jan 23 09:18 pilotlog.txt
[2026-01-23 09:18:16] -rw-r--r--. 1 boincer umatlas        27 Jan 23 09:18 wrapper_checkpoint.txt
[2026-01-23 09:18:16] -rw-------. 1 boincer umatlas    423829 Jan 23 09:18 log.48215263._046351.job.log.1
[2026-01-23 09:18:16] -rw-------. 1 boincer umatlas       357 Jan 23 09:18 output.list
[2026-01-23 09:18:16] -rw-r--r--. 1 boincer umatlas       620 Jan 23 09:18 runtime_log
[2026-01-23 09:18:16] -rw-------. 1 boincer umatlas    768000 Jan 23 09:18 result.tar.gz
[2026-01-23 09:18:16] -rw-r--r--. 1 boincer umatlas      9334 Jan 23 09:18 runtime_log.err
[2026-01-23 09:18:16] -rw-------. 1 boincer umatlas       655 Jan 23 09:18 jxQODmEVU08nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmP5tKDmv4z26m.diag
[2026-01-23 09:18:16] -rw-r--r--. 1 boincer umatlas     22391 Jan 23 09:18 stderr.txt
[2026-01-23 09:18:16] HITS file was successfully produced:
[2026-01-23 09:18:16] -rw-------. 1 boincer umatlas 155944229 Jan 23 09:16 shared/HITS.pool.root.1
[2026-01-23 09:18:16]  *** Contents of shared directory: ***
[2026-01-23 09:18:16] total 739016
[2026-01-23 09:18:16] -rw-r--r--. 2 boincer umatlas 599416404 Jan 23 08:27 ATLAS.root_0
[2026-01-23 09:18:16] -rw-r--r--. 2 boincer umatlas     15847 Jan 23 08:27 start_atlas.sh
[2026-01-23 09:18:16] -rw-r--r--. 2 boincer umatlas    592398 Jan 23 08:27 input.tar.gz
[2026-01-23 09:18:16] -rw-------. 1 boincer umatlas 155944229 Jan 23 09:16 HITS.pool.root.1
[2026-01-23 09:18:16] -rw-------. 1 boincer umatlas    768000 Jan 23 09:18 result.tar.gz
09:18:18 (3910249): run_atlas exited; CPU time 15540.218017
09:18:18 (3910249): called boinc_finish(0)

</stderr_txt>
]]>

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