Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
08:40:43 (556090): wrapper (7.7.26015): starting
08:40:43 (556090): wrapper: running run_atlas (--nthreads 9)
[2026-01-23 08:40:43] Arguments: --nthreads 9
[2026-01-23 08:40:43] Threads: 9
[2026-01-23 08:40:43] Checking for CVMFS
[2026-01-23 08:40:44] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-23 08:40:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-23 08:40:44] Running cvmfs_config stat atlas.cern.ch
[2026-01-23 08:40:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-23 08:40:45] 2.13.3.0 13122 113644 365268 155432 1 113 27189386 32935937 30020 16776704 0 418226639 99.532 524533221 35881 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-23 08:40:45] CVMFS is ok
[2026-01-23 08:40:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-23 08:40:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-23 08:40:45] Further information can be found at the LHC@home message board.
[2026-01-23 08:40:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-23 08:40:45] Checking for apptainer binary...
[2026-01-23 08:40:45] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-23 08:40:45] Running /usr/bin/apptainer --version
[2026-01-23 08:40:45] apptainer version 1.4.5-2.el9
[2026-01-23 08:40:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-23 08:40:46] c6-8-25-2.aglt2.org
[2026-01-23 08:40:46] apptainer works
[2026-01-23 08:40:46] Set ATHENA_PROC_NUMBER=9
[2026-01-23 08:40:46] Set ATHENA_CORE_NUMBER=9
[2026-01-23 08:40:46] Starting ATLAS job with PandaID=6970065316
[2026-01-23 08:40:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
10:20:07 (556090): BOINC client no longer exists - exiting
10:20:07 (556090): timer handler: client dead, exiting
10:28:17 (898516): wrapper (7.7.26015): starting
10:28:17 (898516): wrapper: running run_atlas (--nthreads 9)
[2026-01-23 10:28:17] Arguments: --nthreads 9
[2026-01-23 10:28:17] Threads: 9
[2026-01-23 10:28:17] This job has been restarted, cleaning up previous attempt
[2026-01-23 10:28:18] Checking for CVMFS
[2026-01-23 10:28:18] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-23 10:28:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-23 10:28:18] Running cvmfs_config stat atlas.cern.ch
[2026-01-23 10:28:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-23 10:28:19] 2.13.3.0 13122 113751 358516 155440 2 40 28785505 32935937 29291 16776704 0 418519999 99.532 525125241 35882 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-23 10:28:19] CVMFS is ok
[2026-01-23 10:28:19] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-23 10:28:19] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-23 10:28:19] Further information can be found at the LHC@home message board.
[2026-01-23 10:28:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-23 10:28:19] Checking for apptainer binary...
[2026-01-23 10:28:19] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-23 10:28:19] Running /usr/bin/apptainer --version
[2026-01-23 10:28:19] apptainer version 1.4.5-2.el9
[2026-01-23 10:28:19] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-23 10:28:19] c6-8-25-2.aglt2.org
[2026-01-23 10:28:19] apptainer works
[2026-01-23 10:28:19] Set ATHENA_PROC_NUMBER=9
[2026-01-23 10:28:19] Set ATHENA_CORE_NUMBER=9
[2026-01-23 10:28:19] Starting ATLAS job with PandaID=6970065316
[2026-01-23 10:28:19] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-23 13:14:17]  *** The last 200 lines of the pilot log: ***
[2026-01-23 13:14:17] 2026-01-23 18:13:35,948 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6970065316/memory_monitor_summary.json (trf name=prmon)
[2026-01-23 13:14:17] 2026-01-23 18:13:35,949 | INFO     | extracted standard info from prmon json
[2026-01-23 13:14:17] 2026-01-23 18:13:35,949 | INFO     | extracted standard memory fields from prmon json
[2026-01-23 13:14:17] 2026-01-23 18:13:35,949 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-23 13:14:17] 2026-01-23 18:13:35,954 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-23 13:14:17] 2026-01-23 18:13:35,954 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-23 13:14:17] 2026-01-23 18:13:35,957 | INFO     | fitting pss+swap vs Time
[2026-01-23 13:14:17] 2026-01-23 18:13:35,962 | INFO     | sum of square deviations: 1293768562.211184
[2026-01-23 13:14:17] 2026-01-23 18:13:35,963 | INFO     | sum of deviations: 11719984442.248432
[2026-01-23 13:14:17] 2026-01-23 18:13:35,963 | INFO     | mean x: 1769187092.484472
[2026-01-23 13:14:17] 2026-01-23 18:13:35,963 | INFO     | mean y: 2563474.099378882
[2026-01-23 13:14:17] 2026-01-23 18:13:35,963 | INFO     | intersect: -16024140068.539469
[2026-01-23 13:14:17] 2026-01-23 18:13:35,963 | INFO     | chi2: 2.3573726476622503
[2026-01-23 13:14:17] 2026-01-23 18:13:35,964 | INFO     | sum of square deviations: 1176934346.0
[2026-01-23 13:14:17] 2026-01-23 18:13:35,965 | INFO     | sum of deviations: 21706203767.99999
[2026-01-23 13:14:17] 2026-01-23 18:13:35,965 | INFO     | mean x: 1769186940.0
[2026-01-23 13:14:17] 2026-01-23 18:13:35,965 | INFO     | mean y: 2576163.6346153845
[2026-01-23 13:14:17] 2026-01-23 18:13:35,965 | INFO     | intersect: -32626544019.526707
[2026-01-23 13:14:17] 2026-01-23 18:13:35,965 | INFO     | chi2: 1.6684023280191824
[2026-01-23 13:14:17] 2026-01-23 18:13:35,969 | INFO     | current chi2=1.6684023280191824 (change=29.226194692905388 %)
[2026-01-23 13:14:17] 2026-01-23 18:13:35,969 | INFO     | sum of square deviations: 1067356079.7086073
[2026-01-23 13:14:17] 2026-01-23 18:13:35,970 | INFO     | sum of deviations: 21034628713.529793
[2026-01-23 13:14:17] 2026-01-23 18:13:35,970 | INFO     | mean x: 1769186787.5165563
[2026-01-23 13:14:17] 2026-01-23 18:13:35,970 | INFO     | mean y: 2575228.7880794704
[2026-01-23 13:14:17] 2026-01-23 18:13:35,970 | INFO     | intersect: -34863190664.870316
[2026-01-23 13:14:17] 2026-01-23 18:13:35,970 | INFO     | chi2: 1.6701963804972864
[2026-01-23 13:14:17] 2026-01-23 18:13:35,970 | INFO     | current chi2=1.6701963804972864 (change=-0.1075311660727501 %)
[2026-01-23 13:14:17] 2026-01-23 18:13:35,971 | INFO     | right removable region: 150
[2026-01-23 13:14:17] 2026-01-23 18:13:35,971 | INFO     | sum of square deviations: 1176886766.0
[2026-01-23 13:14:17] 2026-01-23 18:13:35,972 | INFO     | sum of deviations: -17144722865.0
[2026-01-23 13:14:17] 2026-01-23 18:13:35,972 | INFO     | mean x: 1769187245.0
[2026-01-23 13:14:17] 2026-01-23 18:13:35,972 | INFO     | mean y: 2600713.0897435895
[2026-01-23 13:14:17] 2026-01-23 18:13:35,972 | INFO     | intersect: 25775874649.129448
[2026-01-23 13:14:17] 2026-01-23 18:13:35,972 | INFO     | chi2: 0.7494914861461097
[2026-01-23 13:14:17] 2026-01-23 18:13:35,972 | INFO     | current chi2=0.7494914861461097 (change=68.20649094705658 %)
[2026-01-23 13:14:17] 2026-01-23 18:13:35,973 | INFO     | sum of square deviations: 1067289223.7483448
[2026-01-23 13:14:17] 2026-01-23 18:13:35,973 | INFO     | sum of deviations: -18876320918.278145
[2026-01-23 13:14:17] 2026-01-23 18:13:35,974 | INFO     | mean x: 1769187397.4966888
[2026-01-23 13:14:17] 2026-01-23 18:13:35,974 | INFO     | mean y: 2603049.4437086093
[2026-01-23 13:14:17] 2026-01-23 18:13:35,974 | INFO     | intersect: 31292855341.539536
[2026-01-23 13:14:17] 2026-01-23 18:13:35,974 | INFO     | chi2: 0.7242748204705716
[2026-01-23 13:14:17] 2026-01-23 18:13:35,974 | INFO     | current chi2=0.7242748204705716 (change=3.3645032854479 %)
[2026-01-23 13:14:17] 2026-01-23 18:13:35,974 | INFO     | left removable region: 20
[2026-01-23 13:14:17] 2026-01-23 18:13:35,974 | INFO     | sum of square deviations: 681028218.9923089
[2026-01-23 13:14:17] 2026-01-23 18:13:35,975 | INFO     | sum of deviations: -6370513842.653849
[2026-01-23 13:14:17] 2026-01-23 18:13:35,975 | INFO     | mean x: 1769187367.0076923
[2026-01-23 13:14:17] 2026-01-23 18:13:35,975 | INFO     | mean y: 2615181.653846154
[2026-01-23 13:14:17] 2026-01-23 18:13:35,975 | INFO     | intersect: 16552050722.58861
[2026-01-23 13:14:17] 2026-01-23 18:13:35,976 | INFO     | chi2: 0.009378602951814597
[2026-01-23 13:14:17] 2026-01-23 18:13:35,976 | INFO     | current memory leak: -9.35 B/s (using 130 data points, chi2=0.01)
[2026-01-23 13:14:17] 2026-01-23 18:13:35,976 | INFO     | could have reported an average CPU frequency of 2636 MHz (9 samples)
[2026-01-23 13:14:17] 2026-01-23 18:13:35,977 | INFO     | ..............................
[2026-01-23 13:14:17] 2026-01-23 18:13:35,977 | INFO     | . Timing measurements:
[2026-01-23 13:14:17] 2026-01-23 18:13:35,977 | INFO     | . get job = 0 s
[2026-01-23 13:14:17] 2026-01-23 18:13:35,977 | INFO     | . initial setup = 1 s
[2026-01-23 13:14:17] 2026-01-23 18:13:35,977 | INFO     | . payload setup = 20 s
[2026-01-23 13:14:17] 2026-01-23 18:13:35,977 | INFO     | . stage-in = 0 s
[2026-01-23 13:14:17] 2026-01-23 18:13:35,977 | INFO     | . payload execution = 9795 s
[2026-01-23 13:14:17] 2026-01-23 18:13:35,977 | INFO     | . stage-out = 3 s
[2026-01-23 13:14:17] 2026-01-23 18:13:35,977 | INFO     | . log creation = 0 s
[2026-01-23 13:14:17] 2026-01-23 18:13:35,977 | INFO     | ..............................
[2026-01-23 13:14:17] 2026-01-23 18:13:36,083 | INFO     | time since job start (9884s) is within the limit (349056.0s)
[2026-01-23 13:14:17] 2026-01-23 18:13:36,130 | INFO     | 
[2026-01-23 13:14:17] 2026-01-23 18:13:36,131 | INFO     | job summary report
[2026-01-23 13:14:17] 2026-01-23 18:13:36,131 | INFO     | --------------------------------------------------
[2026-01-23 13:14:17] 2026-01-23 18:13:36,131 | INFO     | PanDA job id: 6970065316
[2026-01-23 13:14:17] 2026-01-23 18:13:36,131 | INFO     | task id: 48215263
[2026-01-23 13:14:17] 2026-01-23 18:13:36,131 | INFO     | errors: (none)
[2026-01-23 13:14:17] 2026-01-23 18:13:36,131 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-23 13:14:17] 2026-01-23 18:13:36,131 | INFO     | pilot state: finished 
[2026-01-23 13:14:17] 2026-01-23 18:13:36,131 | INFO     | transexitcode: 0
[2026-01-23 13:14:17] 2026-01-23 18:13:36,131 | INFO     | exeerrorcode: 0
[2026-01-23 13:14:17] 2026-01-23 18:13:36,131 | INFO     | exeerrordiag: 
[2026-01-23 13:14:17] 2026-01-23 18:13:36,131 | INFO     | exitcode: 0
[2026-01-23 13:14:17] 2026-01-23 18:13:36,131 | INFO     | exitmsg: OK
[2026-01-23 13:14:17] 2026-01-23 18:13:36,131 | INFO     | cpuconsumptiontime: 29334 s
[2026-01-23 13:14:17] 2026-01-23 18:13:36,132 | INFO     | nevents: 400
[2026-01-23 13:14:17] 2026-01-23 18:13:36,132 | INFO     | neventsw: 0
[2026-01-23 13:14:17] 2026-01-23 18:13:36,132 | INFO     | pid: 941358
[2026-01-23 13:14:17] 2026-01-23 18:13:36,132 | INFO     | pgrp: 941358
[2026-01-23 13:14:17] 2026-01-23 18:13:36,132 | INFO     | corecount: 9
[2026-01-23 13:14:17] 2026-01-23 18:13:36,132 | INFO     | event service: False
[2026-01-23 13:14:17] 2026-01-23 18:13:36,132 | INFO     | sizes: {0: 2283724, 1: 2283979, 2: 2283979, 12: 2284007, 14: 2284297, 23: 2284325, 9820: 2313050, 9826: 2322048, 9828: 2322104, 9843: 2322362}
[2026-01-23 13:14:17] 2026-01-23 18:13:36,132 | INFO     | --------------------------------------------------
[2026-01-23 13:14:17] 2026-01-23 18:13:36,132 | INFO     | 
[2026-01-23 13:14:17] 2026-01-23 18:13:36,132 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2026-01-23 13:14:17] 2026-01-23 18:13:36,156 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-23 13:14:17] 2026-01-23 18:13:36,157 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-23 13:14:17] 2026-01-23 18:13:36,157 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-23 13:14:17] 2026-01-23 18:13:36,157 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-23 13:14:17] 2026-01-23 18:13:36,157 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-23 13:14:17] 2026-01-23 18:13:36,157 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-23 13:14:17] 2026-01-23 18:13:36,157 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-23 13:14:17] 2026-01-23 18:13:36,157 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-23 13:14:17] 2026-01-23 18:13:36,157 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-23 13:14:17] 2026-01-23 18:13:36,157 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-23 13:14:17] 2026-01-23 18:13:36,157 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-23 13:14:17] 2026-01-23 18:13:36,157 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-23 13:14:17] 2026-01-23 18:13:36,157 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-23 13:14:17] 2026-01-23 18:13:36,158 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-23 13:14:17] 2026-01-23 18:13:36,158 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-23 13:14:17] 2026-01-23 18:13:36,158 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-23 13:14:17] 2026-01-23 18:13:36,158 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-23 13:14:17] 2026-01-23 18:13:36,158 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-23 13:14:17] 2026-01-23 18:13:36,158 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-23 13:14:17] 2026-01-23 18:13:36,158 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-23 13:14:17] 2026-01-23 18:13:36,158 | INFO     | job 6970065316 has completed (purged errors)
[2026-01-23 13:14:17] 2026-01-23 18:13:36,158 | INFO     | overall cleanup function is called
[2026-01-23 13:14:17] 2026-01-23 18:13:37,168 | INFO     | --- collectZombieJob: --- 10, [941358]
[2026-01-23 13:14:17] 2026-01-23 18:13:37,169 | INFO     | zombie collector waiting for pid 941358
[2026-01-23 13:14:17] 2026-01-23 18:13:37,169 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-23 13:14:17] 2026-01-23 18:13:37,169 | INFO     | collected zombie processes
[2026-01-23 13:14:17] 2026-01-23 18:13:37,169 | INFO     | will attempt to kill all subprocesses of pid=941358
[2026-01-23 13:14:17] 2026-01-23 18:13:37,664 | INFO     | process IDs to be killed: [941358] (in reverse order)
[2026-01-23 13:14:17] 2026-01-23 18:13:37,813 | WARNING  | found no corresponding commands to process id(s)
[2026-01-23 13:14:17] 2026-01-23 18:13:37,813 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-23 13:14:17] 2026-01-23 18:13:37,842 | INFO     | did not find any defunct processes belonging to 941358
[2026-01-23 13:14:17] 2026-01-23 18:13:37,865 | INFO     | did not find any defunct processes belonging to 941358
[2026-01-23 13:14:17] 2026-01-23 18:13:37,866 | INFO     | ready for new job
[2026-01-23 13:14:17] 2026-01-23 18:13:37,866 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-23 13:14:17] 2026-01-23 18:13:37,868 | INFO     | ***************************************
[2026-01-23 13:14:17] 2026-01-23 18:13:37,870 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-23 13:14:17] 2026-01-23 18:13:37,871 | INFO     | ***************************************
[2026-01-23 13:14:17] 2026-01-23 18:13:37,871 | INFO     | 
[2026-01-23 13:14:17] 2026-01-23 18:13:37,877 | INFO     | architecture information:
[2026-01-23 13:14:17] 2026-01-23 18:13:37,877 | INFO     | executing command: cat /etc/os-release
[2026-01-23 13:14:17] 2026-01-23 18:13:37,898 | INFO     | cat /etc/os-release:
[2026-01-23 13:14:17] NAME="CentOS Linux"
[2026-01-23 13:14:17] VERSION="7 (Core)"
[2026-01-23 13:14:17] ID="centos"
[2026-01-23 13:14:17] ID_LIKE="rhel fedora"
[2026-01-23 13:14:17] VERSION_ID="7"
[2026-01-23 13:14:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-23 13:14:17] ANSI_COLOR="0;31"
[2026-01-23 13:14:17] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-23 13:14:17] HOME_URL="https://www.centos.org/"
[2026-01-23 13:14:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-23 13:14:17] 
[2026-01-23 13:14:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-23 13:14:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-23 13:14:17] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-23 13:14:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-23 13:14:17] 
[2026-01-23 13:14:17] 2026-01-23 18:13:37,898 | INFO     | ***************************************
[2026-01-23 13:14:17] 2026-01-23 18:13:38,401 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2026-01-23 13:14:17] 2026-01-23 18:13:38,430 | INFO     | sufficient remaining disk space (71362936832 B)
[2026-01-23 13:14:17] 2026-01-23 18:13:38,431 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-23 13:14:17] 2026-01-23 18:13:38,431 | INFO     | current server update state: UPDATING_FINAL
[2026-01-23 13:14:17] 2026-01-23 18:13:38,431 | INFO     | update_server=False
[2026-01-23 13:14:17] 2026-01-23 18:13:38,431 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-23 13:14:17] 2026-01-23 18:13:38,611 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-23 13:14:17] 2026-01-23 18:13:38,612 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-23 13:14:17] 2026-01-23 18:13:38,612 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-23 13:14:17] 2026-01-23 18:13:38,612 | INFO     | will abort loop
[2026-01-23 13:14:17] 2026-01-23 18:13:38,846 | INFO     | all payload control threads have been joined
[2026-01-23 13:14:17] 2026-01-23 18:13:38,882 | INFO     | all job control threads have been joined
[2026-01-23 13:14:17] 2026-01-23 18:13:38,937 | INFO     | all data control threads have been joined
[2026-01-23 13:14:17] 2026-01-23 18:13:39,219 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-23 13:14:17] 2026-01-23 18:13:39,437 | INFO     | [job] retrieve thread has finished
[2026-01-23 13:14:17] 2026-01-23 18:13:39,617 | INFO     | [job] job monitor thread has finished
[2026-01-23 13:14:17] 2026-01-23 18:13:39,853 | INFO     | [payload] control thread has finished
[2026-01-23 13:14:17] 2026-01-23 18:13:39,889 | INFO     | [job] control thread has finished
[2026-01-23 13:14:17] 2026-01-23 18:13:39,944 | INFO     | [data] control thread has finished
[2026-01-23 13:14:17] 2026-01-23 18:13:40,010 | INFO     | [data] copytool_in thread has finished
[2026-01-23 13:14:17] 2026-01-23 18:13:40,025 | INFO     | [payload] execute_payloads thread has finished
[2026-01-23 13:14:17] 2026-01-23 18:13:40,036 | INFO     | [job] create_data_payload thread has finished
[2026-01-23 13:14:17] 2026-01-23 18:13:40,041 | INFO     | [job] validate thread has finished
[2026-01-23 13:14:17] 2026-01-23 18:13:40,273 | INFO     | [payload] validate_pre thread has finished
[2026-01-23 13:14:17] 2026-01-23 18:13:40,290 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-23 13:14:17] 2026-01-23 18:13:40,384 | INFO     | [payload] validate_post thread has finished
[2026-01-23 13:14:17] 2026-01-23 18:13:40,929 | INFO     | [payload] failed_post thread has finished
[2026-01-23 13:14:17] 2026-01-23 18:13:41,082 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-23 13:14:17] 2026-01-23 18:13:41,145 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-23 13:14:17] 2026-01-23 18:13:41,244 | INFO     | [data] copytool_out thread has finished
[2026-01-23 13:14:17] 2026-01-23 18:13:42,151 | INFO     | [job] queue monitor thread has finished
[2026-01-23 13:14:17] 2026-01-23 18:13:45,091 | INFO     | [data] queue_monitor thread has finished
[2026-01-23 13:14:17] 2026-01-23 18:13:49,954 [wrapper] supervise_pilot (15 min periods counter: 12)
[2026-01-23 13:14:17] 2026-01-23 18:14:09,050 | INFO     | [monitor] cgroup control has ended
[2026-01-23 13:14:17] 2026-01-23 18:14:09,822 | INFO     | PID=914056 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-23 13:14:17] 2026-01-23 18:14:09,823 | INFO     | .. there are 29 such processes running
[2026-01-23 13:14:17] 2026-01-23 18:14:09,823 | INFO     | found 0 job(s) in 20 queues
[2026-01-23 13:14:17] 2026-01-23 18:14:09,823 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-23 13:14:17] 2026-01-23 18:14:09,823 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-23 13:14:17] 2026-01-23 18:14:11,002 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139756396930880)>', '<ExcThread(monitor, started 139755543062272)>']
[2026-01-23 13:14:17] 2026-01-23 18:14:11,834 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-23 13:14:17] 2026-01-23 18:14:11,835 | INFO     | [monitor] control thread has ended
[2026-01-23 13:14:17] 2026-01-23 18:14:16,028 | INFO     | all workflow threads have been joined
[2026-01-23 13:14:17] 2026-01-23 18:14:16,029 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-23 13:14:17] 2026-01-23 18:14:16,029 | INFO     | traces error code: 0
[2026-01-23 13:14:17] 2026-01-23 18:14:16,029 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-23 13:14:17] 2026-01-23 18:14:16,523 [wrapper] ==== pilot stdout END ====
[2026-01-23 13:14:17] 2026-01-23 18:14:16,527 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-23 13:14:17] 2026-01-23 18:14:16,530 [wrapper] pilotpid: 914056
[2026-01-23 13:14:17] 2026-01-23 18:14:16,532 [wrapper] Pilot exit status: 0
[2026-01-23 13:14:17] 2026-01-23 18:14:16,553 [wrapper] pandaids: 6970065316 6970065316
[2026-01-23 13:14:17] 2026-01-23 18:14:16,726 [wrapper] cleanup supervisor_pilot 1446324 914057
[2026-01-23 13:14:17] 2026-01-23 18:14:16,764 [wrapper] Test setup, not cleaning
[2026-01-23 13:14:17] 2026-01-23 18:14:16,788 [wrapper] apfmon messages muted
[2026-01-23 13:14:17] 2026-01-23 18:14:16,801 [wrapper] ==== wrapper stdout END ====
[2026-01-23 13:14:17] 2026-01-23 18:14:16,818 [wrapper] ==== wrapper stderr END ====
[2026-01-23 13:14:17]  *** Error codes and diagnostics ***
[2026-01-23 13:14:17]     "exeErrorCode": 0,
[2026-01-23 13:14:17]     "exeErrorDiag": "",
[2026-01-23 13:14:17]     "pilotErrorCode": 0,
[2026-01-23 13:14:17]     "pilotErrorDiag": "",
[2026-01-23 13:14:17]  *** Listing of results directory ***
[2026-01-23 13:14:17] total 1324172
[2026-01-23 13:14:17] drwx------. 5 boincer umatlas      4096 Dec  3 09:30 pilot3
[2026-01-23 13:14:17] -rw-r--r--. 1 boincer umatlas      5112 Jan 14 20:12 queuedata.json
[2026-01-23 13:14:17] -rw-r--r--. 1 boincer umatlas    579449 Jan 14 20:12 pilot3.tar.gz
[2026-01-23 13:14:17] -rwx------. 1 boincer umatlas     36322 Jan 14 20:13 runpilot2-wrapper.sh
[2026-01-23 13:14:17] -rw-r--r--. 1 boincer umatlas       100 Jan 23 08:40 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-23 13:14:17] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 23 08:40 run_atlas
[2026-01-23 13:14:17] -rw-r--r--. 1 boincer umatlas       105 Jan 23 08:40 job.xml
[2026-01-23 13:14:17] -rw-r--r--. 3 boincer umatlas 594939309 Jan 23 08:40 EVNT.32794306._001620.pool.root.1
[2026-01-23 13:14:17] -rw-r--r--. 3 boincer umatlas 594939309 Jan 23 08:40 ATLAS.root_0
[2026-01-23 13:14:17] -rw-r--r--. 2 boincer umatlas     15847 Jan 23 08:40 start_atlas.sh
[2026-01-23 13:14:17] drwxrwx--x. 2 boincer umatlas      4096 Jan 23 08:40 shared
[2026-01-23 13:14:17] -rw-r--r--. 2 boincer umatlas    592398 Jan 23 08:40 input.tar.gz
[2026-01-23 13:14:17] -rw-r--r--. 1 boincer umatlas         0 Jan 23 08:40 boinc_lockfile
[2026-01-23 13:14:17] -rw-r--r--. 1 boincer umatlas      2508 Jan 23 10:28 pandaJob.out
[2026-01-23 13:14:17] -rw-------. 1 boincer umatlas        57 Jan 23 10:28 setup.sh.local
[2026-01-23 13:14:17] -rw-------. 1 boincer umatlas   1004238 Jan 23 10:28 agis_schedconf.cvmfs.json
[2026-01-23 13:14:17] -rw-------. 1 boincer umatlas 158773778 Jan 23 13:12 HITS.48215263._040650.pool.root.1
[2026-01-23 13:14:17] -rw-r--r--. 1 boincer umatlas       532 Jan 23 13:12 boinc_task_state.xml
[2026-01-23 13:14:17] -rw-------. 1 boincer umatlas      1054 Jan 23 13:13 memory_monitor_summary.json
[2026-01-23 13:14:17] -rw-------. 1 boincer umatlas        96 Jan 23 13:13 pilot_heartbeat.json
[2026-01-23 13:14:17] -rw-------. 1 boincer umatlas   1516246 Jan 23 13:13 agis_ddmendpoints.agis.ALL.json
[2026-01-23 13:14:17] -rw-------. 1 boincer umatlas    417864 Jan 23 13:13 log.48215263._040650.job.log.tgz.1
[2026-01-23 13:14:17] -rw-------. 1 boincer umatlas      7849 Jan 23 13:13 heartbeat.json
[2026-01-23 13:14:17] -rw-r--r--. 1 boincer umatlas      6875 Jan 23 13:13 init_data.xml
[2026-01-23 13:14:17] -rw-r--r--. 1 boincer umatlas      8192 Jan 23 13:14 boinc_mmap_file
[2026-01-23 13:14:17] -rw-r--r--. 1 boincer umatlas        28 Jan 23 13:14 wrapper_checkpoint.txt
[2026-01-23 13:14:17] -rw-------. 1 boincer umatlas      5009 Jan 23 13:14 pilotlog.txt
[2026-01-23 13:14:17] -rw-------. 1 boincer umatlas   1260441 Jan 23 13:14 log.48215263._040650.job.log.1
[2026-01-23 13:14:17] -rw-------. 1 boincer umatlas       357 Jan 23 13:14 output.list
[2026-01-23 13:14:17] -rw-r--r--. 1 boincer umatlas       620 Jan 23 13:14 runtime_log
[2026-01-23 13:14:17] -rw-------. 1 boincer umatlas   1699840 Jan 23 13:14 result.tar.gz
[2026-01-23 13:14:17] -rw-r--r--. 1 boincer umatlas      9432 Jan 23 13:14 runtime_log.err
[2026-01-23 13:14:17] -rw-------. 1 boincer umatlas       782 Jan 23 13:14 bdMKDmU6Q08nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmrQtKDmHh3OJo.diag
[2026-01-23 13:14:17] -rw-r--r--. 1 boincer umatlas     23434 Jan 23 13:14 stderr.txt
[2026-01-23 13:14:17] HITS file was successfully produced:
[2026-01-23 13:14:17] -rw-------. 1 boincer umatlas 158773778 Jan 23 13:12 shared/HITS.pool.root.1
[2026-01-23 13:14:17]  *** Contents of shared directory: ***
[2026-01-23 13:14:17] total 738316
[2026-01-23 13:14:17] -rw-r--r--. 3 boincer umatlas 594939309 Jan 23 08:40 ATLAS.root_0
[2026-01-23 13:14:17] -rw-r--r--. 2 boincer umatlas     15847 Jan 23 08:40 start_atlas.sh
[2026-01-23 13:14:17] -rw-r--r--. 2 boincer umatlas    592398 Jan 23 08:40 input.tar.gz
[2026-01-23 13:14:17] -rw-------. 1 boincer umatlas 158773778 Jan 23 13:12 HITS.pool.root.1
[2026-01-23 13:14:17] -rw-------. 1 boincer umatlas   1699840 Jan 23 13:14 result.tar.gz
13:14:39 (898516): run_atlas exited; CPU time 29705.129158
13:14:39 (898516): called boinc_finish(0)

</stderr_txt>
]]>

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