Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
07:47:06 (9868): wrapper (7.7.26015): starting
07:47:06 (9868): wrapper: running run_atlas (--nthreads 8)
[2026-01-23 07:47:06] Arguments: --nthreads 8
[2026-01-23 07:47:06] Threads: 8
[2026-01-23 07:47:06] Checking for CVMFS
[2026-01-23 07:47:06] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-23 07:47:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-23 07:47:06] Running cvmfs_config stat atlas.cern.ch
[2026-01-23 07:47:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-23 07:47:07] 2.11.2.0 2939 146065 96240 155428 0 372 19853382 20275201 376 130560 0 34738146 99.807 9791574 27536 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-23 07:47:07] CVMFS is ok
[2026-01-23 07:47:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-23 07:47:07] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-23 07:47:07] Further information can be found at the LHC@home message board.
[2026-01-23 07:47:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-23 07:47:07] Checking for apptainer binary...
[2026-01-23 07:47:07] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-23 07:47:07] Running /usr/bin/apptainer --version
[2026-01-23 07:47:07] apptainer version 1.3.2-1.el7
[2026-01-23 07:47:07] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-23 07:47:08] c-204-36.aglt2.org
[2026-01-23 07:47:08] apptainer works
[2026-01-23 07:47:08] Set ATHENA_PROC_NUMBER=8
[2026-01-23 07:47:08] Set ATHENA_CORE_NUMBER=8
[2026-01-23 07:47:08] Starting ATLAS job with PandaID=6977886368
[2026-01-23 07:47:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
08:09:57 (5601): wrapper (7.7.26015): starting
08:09:57 (5601): wrapper: running run_atlas (--nthreads 8)
[2026-01-23 08:09:57] Arguments: --nthreads 8
[2026-01-23 08:09:57] Threads: 8
[2026-01-23 08:09:57] This job has been restarted, cleaning up previous attempt
[2026-01-23 08:09:57] Checking for CVMFS
[2026-01-23 08:09:58] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-23 08:09:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-23 08:09:58] Running cvmfs_config stat atlas.cern.ch
[2026-01-23 08:09:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-23 08:09:58] 2.11.2.0 2939 146088 97848 155431 2 66 11189483 20275201 1 130560 0 34822709 99.802 10279445 27823 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-23 08:09:58] CVMFS is ok
[2026-01-23 08:09:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-23 08:09:58] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-23 08:09:58] Further information can be found at the LHC@home message board.
[2026-01-23 08:09:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-23 08:09:58] Checking for apptainer binary...
[2026-01-23 08:09:58] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-23 08:09:58] Running /usr/bin/apptainer --version
[2026-01-23 08:09:58] apptainer version 1.3.2-1.el7
[2026-01-23 08:09:58] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-23 08:10:00] c-204-36.aglt2.org
[2026-01-23 08:10:00] apptainer works
[2026-01-23 08:10:00] Set ATHENA_PROC_NUMBER=8
[2026-01-23 08:10:00] Set ATHENA_CORE_NUMBER=8
[2026-01-23 08:10:00] Starting ATLAS job with PandaID=6977886368
[2026-01-23 08:10:00] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-23 10:39:49]  *** The last 200 lines of the pilot log: ***
[2026-01-23 10:39:49] 2026-01-23 15:39:15,356 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-23 10:39:49] 2026-01-23 15:39:15,467 | INFO     | time since job start (8939s) is within the limit (349056.0s)
[2026-01-23 10:39:49] 2026-01-23 15:39:17,225 | INFO     | job 6977886368 has state=finished
[2026-01-23 10:39:49] 2026-01-23 15:39:17,226 | INFO     | preparing for final server update for job 6977886368 in state='finished'
[2026-01-23 10:39:49] 2026-01-23 15:39:17,326 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-01-23 10:39:49] 2026-01-23 15:39:17,327 | INFO     | reading metadata from: /tmp/boinchome/slots/0/PanDA_Pilot-6977886368/jobReport.json
[2026-01-23 10:39:49] 2026-01-23 15:39:17,329 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-01-23 10:39:49] 2026-01-23 15:39:17,329 | INFO     | this job has now completed (state=finished)
[2026-01-23 10:39:49] 2026-01-23 15:39:17,329 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-23 10:39:49] 2026-01-23 15:39:17,330 | INFO     | log transfer has been attempted: DONE
[2026-01-23 10:39:49] 2026-01-23 15:39:17,330 | INFO     | job 6977886368 has finished - writing final server update
[2026-01-23 10:39:49] 2026-01-23 15:39:17,330 | INFO     | total number of processed events: 400 (read)
[2026-01-23 10:39:49] 2026-01-23 15:39:17,331 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6977886368/memory_monitor_summary.json (trf name=prmon)
[2026-01-23 10:39:49] 2026-01-23 15:39:17,332 | INFO     | extracted standard info from prmon json
[2026-01-23 10:39:49] 2026-01-23 15:39:17,332 | INFO     | extracted standard memory fields from prmon json
[2026-01-23 10:39:49] 2026-01-23 15:39:17,332 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-23 10:39:49] 2026-01-23 15:39:17,333 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-23 10:39:49] 2026-01-23 15:39:17,333 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-23 10:39:49] 2026-01-23 15:39:17,335 | INFO     | fitting pss+swap vs Time
[2026-01-23 10:39:49] 2026-01-23 15:39:17,336 | INFO     | sum of square deviations: 964976232.5
[2026-01-23 10:39:49] 2026-01-23 15:39:17,336 | INFO     | sum of deviations: 6696541539.499993
[2026-01-23 10:39:49] 2026-01-23 15:39:17,336 | INFO     | mean x: 1769178264.5
[2026-01-23 10:39:49] 2026-01-23 15:39:17,337 | INFO     | mean y: 2521591.3767123288
[2026-01-23 10:39:49] 2026-01-23 15:39:17,337 | INFO     | intersect: -12274854099.32949
[2026-01-23 10:39:49] 2026-01-23 15:39:17,337 | INFO     | chi2: 1.5372747467746126
[2026-01-23 10:39:49] 2026-01-23 15:39:17,337 | INFO     | sum of square deviations: 869188390.0
[2026-01-23 10:39:49] 2026-01-23 15:39:17,338 | INFO     | sum of deviations: 6562304604.000003
[2026-01-23 10:39:49] 2026-01-23 15:39:17,338 | INFO     | mean x: 1769178112.0
[2026-01-23 10:39:49] 2026-01-23 15:39:17,338 | INFO     | mean y: 2521377.581560284
[2026-01-23 10:39:49] 2026-01-23 15:39:17,338 | INFO     | intersect: -13354635486.505905
[2026-01-23 10:39:49] 2026-01-23 15:39:17,339 | INFO     | chi2: 1.5387782225082713
[2026-01-23 10:39:49] 2026-01-23 15:39:17,339 | INFO     | current chi2=1.5387782225082713 (change=-0.09780136809071992 %)
[2026-01-23 10:39:49] 2026-01-23 15:39:17,339 | INFO     | right removable region: 140
[2026-01-23 10:39:49] 2026-01-23 15:39:17,339 | INFO     | sum of square deviations: 869188390.0
[2026-01-23 10:39:49] 2026-01-23 15:39:17,340 | INFO     | sum of deviations: -14663327375.999998
[2026-01-23 10:39:49] 2026-01-23 15:39:17,340 | INFO     | mean x: 1769178417.0
[2026-01-23 10:39:49] 2026-01-23 15:39:17,340 | INFO     | mean y: 2555044.609929078
[2026-01-23 10:39:49] 2026-01-23 15:39:17,340 | INFO     | intersect: 29848837638.2194
[2026-01-23 10:39:49] 2026-01-23 15:39:17,340 | INFO     | chi2: 0.12343640407603874
[2026-01-23 10:39:49] 2026-01-23 15:39:17,341 | INFO     | current chi2=0.12343640407603874 (change=91.97043961497297 %)
[2026-01-23 10:39:49] 2026-01-23 15:39:17,341 | INFO     | sum of square deviations: 779958810.0
[2026-01-23 10:39:49] 2026-01-23 15:39:17,342 | INFO     | sum of deviations: -13573669003.999998
[2026-01-23 10:39:49] 2026-01-23 15:39:17,342 | INFO     | mean x: 1769178569.5
[2026-01-23 10:39:49] 2026-01-23 15:39:17,342 | INFO     | mean y: 2553086.117647059
[2026-01-23 10:39:49] 2026-01-23 15:39:17,342 | INFO     | intersect: 30791671695.295494
[2026-01-23 10:39:49] 2026-01-23 15:39:17,342 | INFO     | chi2: 0.1075646382826038
[2026-01-23 10:39:49] 2026-01-23 15:39:17,342 | INFO     | current chi2=0.1075646382826038 (change=12.858253537309533 %)
[2026-01-23 10:39:49] 2026-01-23 15:39:17,342 | INFO     | left removable region: 20
[2026-01-23 10:39:49] 2026-01-23 15:39:17,343 | INFO     | sum of square deviations: 535786790.0
[2026-01-23 10:39:49] 2026-01-23 15:39:17,343 | INFO     | sum of deviations: -3738490042.0
[2026-01-23 10:39:49] 2026-01-23 15:39:17,343 | INFO     | mean x: 1769178691.5
[2026-01-23 10:39:49] 2026-01-23 15:39:17,344 | INFO     | mean y: 2534884.2333333334
[2026-01-23 10:39:49] 2026-01-23 15:39:17,344 | INFO     | intersect: 12347103739.11559
[2026-01-23 10:39:49] 2026-01-23 15:39:17,344 | INFO     | chi2: 0.053091515439572655
[2026-01-23 10:39:49] 2026-01-23 15:39:17,344 | INFO     | current memory leak: -6.98 B/s (using 120 data points, chi2=0.05)
[2026-01-23 10:39:49] 2026-01-23 15:39:17,344 | INFO     | could have reported an average CPU frequency of 1762 MHz (8 samples)
[2026-01-23 10:39:49] 2026-01-23 15:39:17,345 | INFO     | ..............................
[2026-01-23 10:39:49] 2026-01-23 15:39:17,345 | INFO     | . Timing measurements:
[2026-01-23 10:39:49] 2026-01-23 15:39:17,345 | INFO     | . get job = 0 s
[2026-01-23 10:39:49] 2026-01-23 15:39:17,345 | INFO     | . initial setup = 1 s
[2026-01-23 10:39:49] 2026-01-23 15:39:17,345 | INFO     | . payload setup = 8 s
[2026-01-23 10:39:49] 2026-01-23 15:39:17,345 | INFO     | . stage-in = 0 s
[2026-01-23 10:39:49] 2026-01-23 15:39:17,345 | INFO     | . payload execution = 8911 s
[2026-01-23 10:39:49] 2026-01-23 15:39:17,345 | INFO     | . stage-out = 0 s
[2026-01-23 10:39:49] 2026-01-23 15:39:17,345 | INFO     | . log creation = 0 s
[2026-01-23 10:39:49] 2026-01-23 15:39:17,346 | INFO     | ..............................
[2026-01-23 10:39:49] 2026-01-23 15:39:17,430 | INFO     | 
[2026-01-23 10:39:49] 2026-01-23 15:39:17,430 | INFO     | job summary report
[2026-01-23 10:39:49] 2026-01-23 15:39:17,430 | INFO     | --------------------------------------------------
[2026-01-23 10:39:49] 2026-01-23 15:39:17,431 | INFO     | PanDA job id: 6977886368
[2026-01-23 10:39:49] 2026-01-23 15:39:17,431 | INFO     | task id: 48299597
[2026-01-23 10:39:49] 2026-01-23 15:39:17,431 | INFO     | errors: (none)
[2026-01-23 10:39:49] 2026-01-23 15:39:17,431 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-23 10:39:49] 2026-01-23 15:39:17,431 | INFO     | pilot state: finished 
[2026-01-23 10:39:49] 2026-01-23 15:39:17,432 | INFO     | transexitcode: 0
[2026-01-23 10:39:49] 2026-01-23 15:39:17,432 | INFO     | exeerrorcode: 0
[2026-01-23 10:39:49] 2026-01-23 15:39:17,432 | INFO     | exeerrordiag: 
[2026-01-23 10:39:49] 2026-01-23 15:39:17,432 | INFO     | exitcode: 0
[2026-01-23 10:39:49] 2026-01-23 15:39:17,432 | INFO     | exitmsg: OK
[2026-01-23 10:39:49] 2026-01-23 15:39:17,433 | INFO     | cpuconsumptiontime: 64227 s
[2026-01-23 10:39:49] 2026-01-23 15:39:17,433 | INFO     | nevents: 400
[2026-01-23 10:39:49] 2026-01-23 15:39:17,433 | INFO     | neventsw: 0
[2026-01-23 10:39:49] 2026-01-23 15:39:17,433 | INFO     | pid: 11915
[2026-01-23 10:39:49] 2026-01-23 15:39:17,434 | INFO     | pgrp: 11915
[2026-01-23 10:39:49] 2026-01-23 15:39:17,434 | INFO     | corecount: 8
[2026-01-23 10:39:49] 2026-01-23 15:39:17,434 | INFO     | event service: False
[2026-01-23 10:39:49] 2026-01-23 15:39:17,434 | INFO     | sizes: {0: 2283883, 1: 2284400, 12: 2284400, 8923: 2312597, 8925: 2321595, 8928: 2321651, 8930: 2321973}
[2026-01-23 10:39:49] 2026-01-23 15:39:17,434 | INFO     | --------------------------------------------------
[2026-01-23 10:39:49] 2026-01-23 15:39:17,434 | INFO     | 
[2026-01-23 10:39:49] 2026-01-23 15:39:17,435 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-23 10:39:49] 2026-01-23 15:39:17,463 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-23 10:39:49] 2026-01-23 15:39:17,464 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-23 10:39:49] 2026-01-23 15:39:17,464 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-23 10:39:49] 2026-01-23 15:39:17,464 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-23 10:39:49] 2026-01-23 15:39:17,464 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-23 10:39:49] 2026-01-23 15:39:17,464 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-23 10:39:49] 2026-01-23 15:39:17,465 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-23 10:39:49] 2026-01-23 15:39:17,465 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-23 10:39:49] 2026-01-23 15:39:17,465 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-23 10:39:49] 2026-01-23 15:39:17,465 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-23 10:39:49] 2026-01-23 15:39:17,466 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-23 10:39:49] 2026-01-23 15:39:17,466 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-23 10:39:49] 2026-01-23 15:39:17,466 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-23 10:39:49] 2026-01-23 15:39:17,466 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-23 10:39:49] 2026-01-23 15:39:17,467 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-23 10:39:49] 2026-01-23 15:39:17,467 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-23 10:39:49] 2026-01-23 15:39:17,467 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-23 10:39:49] 2026-01-23 15:39:17,467 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-23 10:39:49] 2026-01-23 15:39:17,468 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-23 10:39:49] 2026-01-23 15:39:17,468 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-23 10:39:49] 2026-01-23 15:39:17,468 | INFO     | job 6977886368 has completed (purged errors)
[2026-01-23 10:39:49] 2026-01-23 15:39:17,468 | INFO     | overall cleanup function is called
[2026-01-23 10:39:49] 2026-01-23 15:39:18,477 | INFO     | --- collectZombieJob: --- 10, [11915]
[2026-01-23 10:39:49] 2026-01-23 15:39:18,477 | INFO     | zombie collector waiting for pid 11915
[2026-01-23 10:39:49] 2026-01-23 15:39:18,477 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-23 10:39:49] 2026-01-23 15:39:18,477 | INFO     | collected zombie processes
[2026-01-23 10:39:49] 2026-01-23 15:39:18,478 | INFO     | will attempt to kill all subprocesses of pid=11915
[2026-01-23 10:39:49] 2026-01-23 15:39:18,573 | INFO     | process IDs to be killed: [11915] (in reverse order)
[2026-01-23 10:39:49] 2026-01-23 15:39:18,630 | WARNING  | found no corresponding commands to process id(s)
[2026-01-23 10:39:49] 2026-01-23 15:39:18,631 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-23 10:39:49] 2026-01-23 15:39:18,636 | INFO     | did not find any defunct processes belonging to 11915
[2026-01-23 10:39:49] 2026-01-23 15:39:18,640 | INFO     | did not find any defunct processes belonging to 11915
[2026-01-23 10:39:49] 2026-01-23 15:39:18,640 | INFO     | ready for new job
[2026-01-23 10:39:49] 2026-01-23 15:39:18,641 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-23 10:39:49] 2026-01-23 15:39:18,642 | INFO     | **************************************
[2026-01-23 10:39:49] 2026-01-23 15:39:18,643 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-23 10:39:49] 2026-01-23 15:39:18,643 | INFO     | **************************************
[2026-01-23 10:39:49] 2026-01-23 15:39:18,643 | INFO     | 
[2026-01-23 10:39:49] 2026-01-23 15:39:18,644 | INFO     | architecture information:
[2026-01-23 10:39:49] 2026-01-23 15:39:18,644 | INFO     | executing command: cat /etc/os-release
[2026-01-23 10:39:49] 2026-01-23 15:39:18,663 | INFO     | cat /etc/os-release:
[2026-01-23 10:39:49] NAME="CentOS Linux"
[2026-01-23 10:39:49] VERSION="7 (Core)"
[2026-01-23 10:39:49] ID="centos"
[2026-01-23 10:39:49] ID_LIKE="rhel fedora"
[2026-01-23 10:39:49] VERSION_ID="7"
[2026-01-23 10:39:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-23 10:39:49] ANSI_COLOR="0;31"
[2026-01-23 10:39:49] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-23 10:39:49] HOME_URL="https://www.centos.org/"
[2026-01-23 10:39:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-23 10:39:49] 
[2026-01-23 10:39:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-23 10:39:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-23 10:39:49] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-23 10:39:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-23 10:39:49] 
[2026-01-23 10:39:49] 2026-01-23 15:39:18,664 | INFO     | **************************************
[2026-01-23 10:39:49] 2026-01-23 15:39:19,167 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-23 10:39:49] 2026-01-23 15:39:19,186 | INFO     | sufficient remaining disk space (18492686336 B)
[2026-01-23 10:39:49] 2026-01-23 15:39:19,187 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-23 10:39:49] 2026-01-23 15:39:19,187 | INFO     | current server update state: UPDATING_FINAL
[2026-01-23 10:39:49] 2026-01-23 15:39:19,187 | INFO     | update_server=False
[2026-01-23 10:39:49] 2026-01-23 15:39:19,187 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-23 10:39:49] 2026-01-23 15:39:19,188 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-23 10:39:49] 2026-01-23 15:39:19,188 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-23 10:39:49] 2026-01-23 15:39:19,189 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-23 10:39:49] 2026-01-23 15:39:19,189 | INFO     | aborting loop
[2026-01-23 10:39:49] 2026-01-23 15:39:19,617 | INFO     | all data control threads have been joined
[2026-01-23 10:39:49] 2026-01-23 15:39:20,002 | INFO     | all payload control threads have been joined
[2026-01-23 10:39:49] 2026-01-23 15:39:20,191 | INFO     | [job] job monitor thread has finished
[2026-01-23 10:39:49] 2026-01-23 15:39:20,193 | INFO     | [job] retrieve thread has finished
[2026-01-23 10:39:49] 2026-01-23 15:39:20,194 | INFO     | [job] queue monitor thread has finished
[2026-01-23 10:39:49] 2026-01-23 15:39:20,596 | INFO     | [payload] validate_pre thread has finished
[2026-01-23 10:39:49] 2026-01-23 15:39:20,599 | INFO     | [payload] failed_post thread has finished
[2026-01-23 10:39:49] 2026-01-23 15:39:20,620 | INFO     | [data] control thread has finished
[2026-01-23 10:39:49] 2026-01-23 15:39:20,690 | INFO     | [job] create_data_payload thread has finished
[2026-01-23 10:39:49] 2026-01-23 15:39:20,693 | INFO     | [data] copytool_in thread has finished
[2026-01-23 10:39:49] 2026-01-23 15:39:20,750 | INFO     | all job control threads have been joined
[2026-01-23 10:39:49] 2026-01-23 15:39:20,873 | INFO     | [payload] execute_payloads thread has finished
[2026-01-23 10:39:49] 2026-01-23 15:39:21,007 | INFO     | [payload] control thread has finished
[2026-01-23 10:39:49] 2026-01-23 15:39:21,194 | INFO     | [data] copytool_out thread has finished
[2026-01-23 10:39:49] 2026-01-23 15:39:21,232 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-23 10:39:49] 2026-01-23 15:39:21,449 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-23 10:39:49] 2026-01-23 15:39:21,582 | INFO     | [payload] validate_post thread has finished
[2026-01-23 10:39:49] 2026-01-23 15:39:21,607 | INFO     | [job] validate thread has finished
[2026-01-23 10:39:49] 2026-01-23 15:39:21,755 | INFO     | [job] control thread has finished
[2026-01-23 10:39:49] 2026-01-23 15:39:25,455 | INFO     | [data] queue_monitor thread has finished
[2026-01-23 10:39:49] 2026-01-23 15:39:30,263 | INFO     | [monitor] cgroup control has ended
[2026-01-23 10:39:49] 2026-01-23 15:39:30,446 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140083987740480)>', '<ExcThread(monitor, started 140082942031616)>']
[2026-01-23 10:39:49] 2026-01-23 15:39:35,463 | INFO     | all workflow threads have been joined
[2026-01-23 10:39:49] 2026-01-23 15:39:35,464 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-23 10:39:49] 2026-01-23 15:39:35,464 | INFO     | traces error code: 0
[2026-01-23 10:39:49] 2026-01-23 15:39:35,464 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-23 10:39:49] 2026-01-23 15:39:48,671 | INFO     | PID=9533 has CPU usage=3.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2026-01-23 10:39:49] 2026-01-23 15:39:48,672 | INFO     | found 0 job(s) in 20 queues
[2026-01-23 10:39:49] 2026-01-23 15:39:48,672 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-23 10:39:49] 2026-01-23 15:39:48,672 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-23 10:39:49] 2026-01-23 15:39:48,672 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-23 10:39:49] 2026-01-23 15:39:48,672 | INFO     | [monitor] control thread has ended
[2026-01-23 10:39:49] 2026-01-23 15:39:48,786 [wrapper] ==== pilot stdout END ====
[2026-01-23 10:39:49] 2026-01-23 15:39:48,790 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-23 10:39:49] 2026-01-23 15:39:48,795 [wrapper] pilotpid: 9533
[2026-01-23 10:39:49] 2026-01-23 15:39:48,799 [wrapper] Pilot exit status: 0
[2026-01-23 10:39:49] 2026-01-23 15:39:48,815 [wrapper] pandaids: 6977886368 6977886368
[2026-01-23 10:39:49] 2026-01-23 15:39:48,859 [wrapper] cleanup supervisor_pilot 14965 9534
[2026-01-23 10:39:49] 2026-01-23 15:39:48,864 [wrapper] Test setup, not cleaning
[2026-01-23 10:39:49] 2026-01-23 15:39:48,869 [wrapper] apfmon messages muted
[2026-01-23 10:39:49] 2026-01-23 15:39:48,873 [wrapper] ==== wrapper stdout END ====
[2026-01-23 10:39:49] 2026-01-23 15:39:48,878 [wrapper] ==== wrapper stderr END ====
[2026-01-23 10:39:49]  *** Error codes and diagnostics ***
[2026-01-23 10:39:49]     "exeErrorCode": 0,
[2026-01-23 10:39:49]     "exeErrorDiag": "",
[2026-01-23 10:39:49]     "pilotErrorCode": 0,
[2026-01-23 10:39:49]     "pilotErrorDiag": "",
[2026-01-23 10:39:49]  *** Listing of results directory ***
[2026-01-23 10:39:49] total 669088
[2026-01-23 10:39:49] drwx------ 5 boincer umatlas      4096 Jan 14 05:00 pilot3
[2026-01-23 10:39:49] -rw-r--r-- 1 boincer umatlas    584422 Jan 22 14:57 pilot3.tar.gz
[2026-01-23 10:39:49] -rwx------ 1 boincer umatlas     36322 Jan 22 15:00 runpilot2-wrapper.sh
[2026-01-23 10:39:49] -rw-r--r-- 1 boincer umatlas      5111 Jan 22 15:01 queuedata.json
[2026-01-23 10:39:49] -rw-r--r-- 1 boincer umatlas       100 Jan 23 07:47 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-23 10:39:49] -rwxr-xr-x 1 boincer umatlas      7986 Jan 23 07:47 run_atlas
[2026-01-23 10:39:49] -rw-r--r-- 1 boincer umatlas       105 Jan 23 07:47 job.xml
[2026-01-23 10:39:49] -rw-r--r-- 3 boincer umatlas 253194339 Jan 23 07:47 EVNT.48299595._000004.pool.root.1
[2026-01-23 10:39:49] -rw-r--r-- 3 boincer umatlas 253194339 Jan 23 07:47 ATLAS.root_0
[2026-01-23 10:39:49] -rw-r--r-- 2 boincer umatlas     15845 Jan 23 07:47 start_atlas.sh
[2026-01-23 10:39:49] drwxrwx--x 2 boincer umatlas      4096 Jan 23 07:47 shared
[2026-01-23 10:39:49] -rw-r--r-- 2 boincer umatlas    597778 Jan 23 07:47 input.tar.gz
[2026-01-23 10:39:49] -rw-r--r-- 1 boincer umatlas         0 Jan 23 07:47 boinc_lockfile
[2026-01-23 10:39:49] -rw------- 1 boincer umatlas   1516246 Jan 23 07:47 agis_ddmendpoints.agis.ALL.json
[2026-01-23 10:39:49] -rw-r--r-- 1 boincer umatlas      2618 Jan 23 08:10 pandaJob.out
[2026-01-23 10:39:49] -rw------- 1 boincer umatlas        57 Jan 23 08:10 setup.sh.local
[2026-01-23 10:39:49] -rw------- 1 boincer umatlas   1004198 Jan 23 08:10 agis_schedconf.cvmfs.json
[2026-01-23 10:39:49] -rw------- 1 boincer umatlas       431 Jan 23 08:10 workernode_map.json
[2026-01-23 10:39:49] -rw-r--r-- 1 boincer umatlas      5909 Jan 23 10:38 init_data.xml
[2026-01-23 10:39:49] -rw------- 1 boincer umatlas 171525507 Jan 23 10:38 HITS.48299597._000096.pool.root.1
[2026-01-23 10:39:49] -rw-r--r-- 1 boincer umatlas       530 Jan 23 10:38 boinc_task_state.xml
[2026-01-23 10:39:49] -rw------- 1 boincer umatlas      1055 Jan 23 10:39 memory_monitor_summary.json
[2026-01-23 10:39:49] -rw------- 1 boincer umatlas    395149 Jan 23 10:39 log.48299597._000096.job.log.tgz.1
[2026-01-23 10:39:49] -rw------- 1 boincer umatlas      6395 Jan 23 10:39 heartbeat.json
[2026-01-23 10:39:49] -rw-r--r-- 1 boincer umatlas      8192 Jan 23 10:39 boinc_mmap_file
[2026-01-23 10:39:49] -rw-r--r-- 1 boincer umatlas        27 Jan 23 10:39 wrapper_checkpoint.txt
[2026-01-23 10:39:49] -rw------- 1 boincer umatlas        96 Jan 23 10:39 pilot_heartbeat.json
[2026-01-23 10:39:49] -rw------- 1 boincer umatlas       744 Jan 23 10:39 pilotlog.txt
[2026-01-23 10:39:49] -rw------- 1 boincer umatlas   1250145 Jan 23 10:39 log.48299597._000096.job.log.1
[2026-01-23 10:39:49] -rw------- 1 boincer umatlas       357 Jan 23 10:39 output.list
[2026-01-23 10:39:49] -rw-r--r-- 1 boincer umatlas       620 Jan 23 10:39 runtime_log
[2026-01-23 10:39:49] -rw------- 1 boincer umatlas   1658880 Jan 23 10:39 result.tar.gz
[2026-01-23 10:39:49] -rw-r--r-- 1 boincer umatlas      9426 Jan 23 10:39 runtime_log.err
[2026-01-23 10:39:49] -rw------- 1 boincer umatlas       785 Jan 23 10:39 3RPMDmO2F38n9Rq4apOajLDm4fhM0noT9bVo0NGKDmqeuKDmAKTJtm.diag
[2026-01-23 10:39:49] -rw-r--r-- 1 boincer umatlas     23417 Jan 23 10:39 stderr.txt
[2026-01-23 10:39:49] HITS file was successfully produced:
[2026-01-23 10:39:49] -rw------- 1 boincer umatlas 171525507 Jan 23 10:38 shared/HITS.pool.root.1
[2026-01-23 10:39:49]  *** Contents of shared directory: ***
[2026-01-23 10:39:49] total 416996
[2026-01-23 10:39:49] -rw-r--r-- 3 boincer umatlas 253194339 Jan 23 07:47 ATLAS.root_0
[2026-01-23 10:39:49] -rw-r--r-- 2 boincer umatlas     15845 Jan 23 07:47 start_atlas.sh
[2026-01-23 10:39:49] -rw-r--r-- 2 boincer umatlas    597778 Jan 23 07:47 input.tar.gz
[2026-01-23 10:39:49] -rw------- 1 boincer umatlas 171525507 Jan 23 10:38 HITS.pool.root.1
[2026-01-23 10:39:49] -rw------- 1 boincer umatlas   1658880 Jan 23 10:39 result.tar.gz
10:39:50 (5601): run_atlas exited; CPU time 64142.028022
10:39:50 (5601): called boinc_finish(0)

</stderr_txt>
]]>

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