Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
23:03:38 (709777): wrapper (7.7.26015): starting
23:03:38 (709777): wrapper: running run_atlas (--nthreads 4)
[2026-01-23 23:03:38] Arguments: --nthreads 4
[2026-01-23 23:03:38] Threads: 4
[2026-01-23 23:03:38] Checking for CVMFS
[2026-01-23 23:03:38] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-23 23:03:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-23 23:03:38] Running cvmfs_config stat atlas.cern.ch
[2026-01-23 23:03:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-23 23:03:38] 2.9.2.0 3061 3790 98232 155449 2 50 22679363 36864001 0 130560 0 1978339 99.992 89575 8055 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-01-23 23:03:38] CVMFS is ok
[2026-01-23 23:03:38] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-23 23:03:38] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-23 23:03:38] Further information can be found at the LHC@home message board.
[2026-01-23 23:03:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-23 23:03:38] Checking for apptainer binary...
[2026-01-23 23:03:38] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-23 23:03:38] Running /usr/bin/apptainer --version
[2026-01-23 23:03:38] apptainer version 1.4.1-1.1
[2026-01-23 23:03:38] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-23 23:03:38] thA325
[2026-01-23 23:03:38] apptainer works
[2026-01-23 23:03:38] Set ATHENA_PROC_NUMBER=4
[2026-01-23 23:03:38] Set ATHENA_CORE_NUMBER=4
[2026-01-23 23:03:38] Starting ATLAS job with PandaID=6978101743
[2026-01-23 23:03:38] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-24 00:23:14]  *** The last 200 lines of the pilot log: ***
[2026-01-24 00:23:14] 2026-01-23 23:22:43,049 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-24 00:23:14] 2026-01-23 23:22:43,049 | INFO     | job 6978101743 has completed (purged errors)
[2026-01-24 00:23:14] 2026-01-23 23:22:43,049 | INFO     | overall cleanup function is called
[2026-01-24 00:23:14] 2026-01-23 23:22:44,055 | INFO     | --- collectZombieJob: --- 10, [718393]
[2026-01-24 00:23:14] 2026-01-23 23:22:44,056 | INFO     | zombie collector waiting for pid 718393
[2026-01-24 00:23:14] 2026-01-23 23:22:44,056 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-24 00:23:14] 2026-01-23 23:22:44,056 | INFO     | collected zombie processes
[2026-01-24 00:23:14] 2026-01-23 23:22:44,056 | INFO     | will attempt to kill all subprocesses of pid=718393
[2026-01-24 00:23:14] 2026-01-23 23:22:44,099 | INFO     | process IDs to be killed: [718393] (in reverse order)
[2026-01-24 00:23:14] 2026-01-23 23:22:44,131 | WARNING  | found no corresponding commands to process id(s)
[2026-01-24 00:23:14] 2026-01-23 23:22:44,131 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-24 00:23:14] 2026-01-23 23:22:44,133 | INFO     | did not find any defunct processes belonging to 718393
[2026-01-24 00:23:14] 2026-01-23 23:22:44,135 | INFO     | did not find any defunct processes belonging to 718393
[2026-01-24 00:23:14] 2026-01-23 23:22:44,135 | INFO     | ready for new job
[2026-01-24 00:23:14] 2026-01-23 23:22:44,135 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-24 00:23:14] 2026-01-23 23:22:44,135 | INFO     | **************************************
[2026-01-24 00:23:14] 2026-01-23 23:22:44,135 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-24 00:23:14] 2026-01-23 23:22:44,135 | INFO     | **************************************
[2026-01-24 00:23:14] 2026-01-23 23:22:44,136 | INFO     | 
[2026-01-24 00:23:14] 2026-01-23 23:22:44,136 | INFO     | architecture information:
[2026-01-24 00:23:14] 2026-01-23 23:22:44,136 | INFO     | executing command: cat /etc/os-release
[2026-01-24 00:23:14] 2026-01-23 23:22:44,150 | INFO     | cat /etc/os-release:
[2026-01-24 00:23:14] NAME="CentOS Linux"
[2026-01-24 00:23:14] VERSION="7 (Core)"
[2026-01-24 00:23:14] ID="centos"
[2026-01-24 00:23:14] ID_LIKE="rhel fedora"
[2026-01-24 00:23:14] VERSION_ID="7"
[2026-01-24 00:23:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-24 00:23:14] ANSI_COLOR="0;31"
[2026-01-24 00:23:14] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-24 00:23:14] HOME_URL="https://www.centos.org/"
[2026-01-24 00:23:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-24 00:23:14] 
[2026-01-24 00:23:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-24 00:23:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-24 00:23:14] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-24 00:23:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-24 00:23:14] 
[2026-01-24 00:23:14] 2026-01-23 23:22:44,150 | INFO     | **************************************
[2026-01-24 00:23:14] 2026-01-23 23:22:44,653 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-01-24 00:23:14] 2026-01-23 23:22:44,670 | INFO     | sufficient remaining disk space (234895704064 B)
[2026-01-24 00:23:14] 2026-01-23 23:22:44,670 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-24 00:23:14] 2026-01-23 23:22:44,670 | INFO     | current server update state: UPDATING_FINAL
[2026-01-24 00:23:14] 2026-01-23 23:22:44,670 | INFO     | update_server=False
[2026-01-24 00:23:14] 2026-01-23 23:22:44,670 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-24 00:23:14] 2026-01-23 23:22:44,671 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-24 00:23:14] 2026-01-23 23:22:44,671 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-24 00:23:14] 2026-01-23 23:22:44,671 | INFO     | aborting loop
[2026-01-24 00:23:14] 2026-01-23 23:22:45,032 | INFO     | all payload control threads have been joined
[2026-01-24 00:23:14] 2026-01-23 23:22:45,533 | INFO     | all data control threads have been joined
[2026-01-24 00:23:14] 2026-01-23 23:22:45,674 | INFO     | [job] job monitor thread has finished
[2026-01-24 00:23:14] 2026-01-23 23:22:45,676 | INFO     | [job] retrieve thread has finished
[2026-01-24 00:23:14] 2026-01-23 23:22:45,676 | INFO     | [job] queue monitor thread has finished
[2026-01-24 00:23:14] 2026-01-23 23:22:45,857 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-24 00:23:14] 2026-01-23 23:22:45,873 | INFO     | all job control threads have been joined
[2026-01-24 00:23:14] 2026-01-23 23:22:45,960 | INFO     | [payload] execute_payloads thread has finished
[2026-01-24 00:23:14] 2026-01-23 23:22:46,038 | INFO     | [payload] control thread has finished
[2026-01-24 00:23:14] 2026-01-23 23:22:46,448 | INFO     | [job] validate thread has finished
[2026-01-24 00:23:14] 2026-01-23 23:22:46,505 | INFO     | [payload] validate_post thread has finished
[2026-01-24 00:23:14] 2026-01-23 23:22:46,513 | INFO     | [job] create_data_payload thread has finished
[2026-01-24 00:23:14] 2026-01-23 23:22:46,539 | INFO     | [data] control thread has finished
[2026-01-24 00:23:14] 2026-01-23 23:22:46,606 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-24 00:23:14] 2026-01-23 23:22:46,620 | INFO     | [payload] validate_pre thread has finished
[2026-01-24 00:23:14] 2026-01-23 23:22:46,753 | INFO     | [data] copytool_in thread has finished
[2026-01-24 00:23:14] 2026-01-23 23:22:46,780 | INFO     | [payload] failed_post thread has finished
[2026-01-24 00:23:14] 2026-01-23 23:22:46,879 | INFO     | [job] control thread has finished
[2026-01-24 00:23:14] 2026-01-23 23:22:47,863 | INFO     | [data] copytool_out thread has finished
[2026-01-24 00:23:14] 2026-01-23 23:22:50,613 | INFO     | [data] queue_monitor thread has finished
[2026-01-24 00:23:14] 2026-01-23 23:22:55,192 | INFO     | [monitor] cgroup control has ended
[2026-01-24 00:23:14] 2026-01-23 23:22:55,308 | INFO     | job.realtimelogging is not enabled
[2026-01-24 00:23:14] 2026-01-23 23:22:56,313 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-24 00:23:14] 2026-01-23 23:22:57,703 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140550652700480)>', '<ExcThread(monitor, started 140549566748416)>']
[2026-01-24 00:23:14] 2026-01-23 23:23:02,728 | INFO     | all workflow threads have been joined
[2026-01-24 00:23:14] 2026-01-23 23:23:02,729 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-24 00:23:14] 2026-01-23 23:23:02,729 | INFO     | traces error code: 0
[2026-01-24 00:23:14] 2026-01-23 23:23:02,729 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-24 00:23:14] 2026-01-23 23:23:14,720 | INFO     | PID=713880 has CPU usage=0.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-24 00:23:14] 2026-01-23 23:23:14,721 | INFO     | found 0 job(s) in 20 queues
[2026-01-24 00:23:14] 2026-01-23 23:23:14,721 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-24 00:23:14] 2026-01-23 23:23:14,721 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-24 00:23:14] 2026-01-23 23:23:14,721 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-24 00:23:14] 2026-01-23 23:23:14,721 | INFO     | [monitor] control thread has ended
[2026-01-24 00:23:14] 2026-01-23 23:23:14,784 [wrapper] ==== pilot stdout END ====
[2026-01-24 00:23:14] 2026-01-23 23:23:14,788 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-24 00:23:14] 2026-01-23 23:23:14,792 [wrapper] pilotpid: 713880
[2026-01-24 00:23:14] 2026-01-23 23:23:14,796 [wrapper] Pilot exit status: 0
[2026-01-24 00:23:14] 2026-01-23 23:23:14,807 [wrapper] pandaids: 6978101743
[2026-01-24 00:23:14] 2026-01-23 23:23:14,827 [wrapper] cleanup supervisor_pilot  723908 713881
[2026-01-24 00:23:14] 2026-01-23 23:23:14,831 [wrapper] Test setup, not cleaning
[2026-01-24 00:23:14] 2026-01-23 23:23:14,834 [wrapper] apfmon messages muted
[2026-01-24 00:23:14] 2026-01-23 23:23:14,838 [wrapper] ==== wrapper stdout END ====
[2026-01-24 00:23:14] 2026-01-23 23:23:14,841 [wrapper] ==== wrapper stderr END ====
[2026-01-24 00:23:14]  *** Error codes and diagnostics ***
[2026-01-24 00:23:14]     "exeErrorCode": 0,
[2026-01-24 00:23:14]     "exeErrorDiag": "",
[2026-01-24 00:23:14]     "pilotErrorCode": 0,
[2026-01-24 00:23:14]     "pilotErrorDiag": "",
[2026-01-24 00:23:14]  *** Listing of results directory ***
[2026-01-24 00:23:14] total 418060
[2026-01-24 00:23:14] -rw-r--r-- 1 boinc boinc    584422 Jan 23 04:26 pilot3.tar.gz
[2026-01-24 00:23:14] -rwx------ 1 boinc boinc     36322 Jan 23 04:27 runpilot2-wrapper.sh
[2026-01-24 00:23:14] -rw-r--r-- 1 boinc boinc      5111 Jan 23 04:29 queuedata.json
[2026-01-24 00:23:14] -rw-r--r-- 1 boinc boinc       100 Jan 23 23:03 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-24 00:23:14] -rwxr-xr-x 1 boinc boinc      7986 Jan 23 23:03 run_atlas
[2026-01-24 00:23:14] -rw-r--r-- 1 boinc boinc       105 Jan 23 23:03 job.xml
[2026-01-24 00:23:14] -rw-r--r-- 2 boinc boinc 252838403 Jan 23 23:03 EVNT.48299595._000006.pool.root.1
[2026-01-24 00:23:14] -rw-r--r-- 2 boinc boinc    597777 Jan 23 23:03 input.tar.gz
[2026-01-24 00:23:14] -rw-r--r-- 2 boinc boinc     15845 Jan 23 23:03 start_atlas.sh
[2026-01-24 00:23:14] drwxrwx--x 2 boinc boinc      4096 Jan 23 23:03 shared
[2026-01-24 00:23:14] -rw-r--r-- 1 boinc boinc         0 Jan 23 23:03 boinc_setup_complete
[2026-01-24 00:23:14] -rw-r--r-- 1 boinc boinc      6369 Jan 23 23:03 init_data.xml
[2026-01-24 00:23:14] -rw-r--r-- 1 boinc boinc         0 Jan 23 23:03 boinc_lockfile
[2026-01-24 00:23:14] -rw-r--r-- 1 boinc boinc      2629 Jan 23 23:03 pandaJob.out
[2026-01-24 00:23:14] -rw------- 1 boinc boinc   1004254 Jan 23 23:03 agis_schedconf.cvmfs.json
[2026-01-24 00:23:14] -rw------- 1 boinc boinc   1516246 Jan 23 23:03 agis_ddmendpoints.agis.ALL.json
[2026-01-24 00:23:14] -rw------- 1 boinc boinc       418 Jan 23 23:03 workernode_map.json
[2026-01-24 00:23:14] drwx------ 5 boinc boinc      4096 Jan 23 23:03 pilot3
[2026-01-24 00:23:14] -rw------- 1 boinc boinc 169377919 Jan 24 00:22 HITS.48299597._000348.pool.root.1
[2026-01-24 00:23:14] -rw-r--r-- 1 boinc boinc       529 Jan 24 00:22 boinc_task_state.xml
[2026-01-24 00:23:14] -rw------- 1 boinc boinc      1021 Jan 24 00:22 memory_monitor_summary.json
[2026-01-24 00:23:14] -rw------- 1 boinc boinc    277449 Jan 24 00:22 log.48299597._000348.job.log.tgz.1
[2026-01-24 00:23:14] -rw------- 1 boinc boinc      6293 Jan 24 00:22 heartbeat.json
[2026-01-24 00:23:14] -rw-r--r-- 1 boinc boinc      8192 Jan 24 00:23 boinc_mmap_file
[2026-01-24 00:23:14] -rw-r--r-- 1 boinc boinc        27 Jan 24 00:23 wrapper_checkpoint.txt
[2026-01-24 00:23:14] -rw------- 1 boinc boinc       746 Jan 24 00:23 pilotlog.txt
[2026-01-24 00:23:14] -rw------- 1 boinc boinc        95 Jan 24 00:23 pilot_heartbeat.json
[2026-01-24 00:23:14] -rw------- 1 boinc boinc    696024 Jan 24 00:23 log.48299597._000348.job.log.1
[2026-01-24 00:23:14] -rw------- 1 boinc boinc       357 Jan 24 00:23 output.list
[2026-01-24 00:23:14] -rw-r--r-- 1 boinc boinc       620 Jan 24 00:23 runtime_log
[2026-01-24 00:23:14] -rw------- 1 boinc boinc    993280 Jan 24 00:23 result.tar.gz
[2026-01-24 00:23:14] -rw-r--r-- 1 boinc boinc      8896 Jan 24 00:23 runtime_log.err
[2026-01-24 00:23:14] -rw------- 1 boinc boinc       657 Jan 24 00:23 ebJMDmA1M38nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmOp1KDm3iJZln.diag
[2026-01-24 00:23:14] -rw-r--r-- 1 boinc boinc     10984 Jan 24 00:23 stderr.txt
[2026-01-24 00:23:14] HITS file was successfully produced:
[2026-01-24 00:23:14] -rw------- 1 boinc boinc 169377919 Jan 24 00:22 shared/HITS.pool.root.1
[2026-01-24 00:23:14]  *** Contents of shared directory: ***
[2026-01-24 00:23:14] total 413908
[2026-01-24 00:23:14] -rw-r--r-- 2 boinc boinc 252838403 Jan 23 23:03 ATLAS.root_0
[2026-01-24 00:23:14] -rw-r--r-- 2 boinc boinc    597777 Jan 23 23:03 input.tar.gz
[2026-01-24 00:23:14] -rw-r--r-- 2 boinc boinc     15845 Jan 23 23:03 start_atlas.sh
[2026-01-24 00:23:14] -rw------- 1 boinc boinc 169377919 Jan 24 00:22 HITS.pool.root.1
[2026-01-24 00:23:14] -rw------- 1 boinc boinc    993280 Jan 24 00:23 result.tar.gz
00:23:16 (709777): run_atlas exited; CPU time 17982.798062
00:23:16 (709777): called boinc_finish(0)

</stderr_txt>
]]>

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