Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:47:27 (1708052): wrapper (7.7.26015): starting
21:47:27 (1708052): wrapper: running run_atlas (--nthreads 6)
[2026-01-23 21:47:27] Arguments: --nthreads 6
[2026-01-23 21:47:27] Threads: 6
[2026-01-23 21:47:27] Checking for CVMFS
[2026-01-23 21:47:27] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-23 21:47:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-23 21:47:50] Running cvmfs_config stat atlas.cern.ch
[2026-01-23 21:47:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-23 21:47:51] 2.13.3.0 1625780 351 52824 155428 1 188 13331078 20971521 929 130560 0 270845 99.999 4061 5 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2026-01-23 21:47:51] CVMFS is ok
[2026-01-23 21:47:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-23 21:47:51] Checking for apptainer binary...
[2026-01-23 21:47:51] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-23 21:47:51] Running /usr/bin/apptainer --version
[2026-01-23 21:47:51] apptainer version 1.4.5-2.el9
[2026-01-23 21:47:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-23 21:47:51] testio005
[2026-01-23 21:47:51] apptainer works
[2026-01-23 21:47:51] Set ATHENA_PROC_NUMBER=6
[2026-01-23 21:47:51] Set ATHENA_CORE_NUMBER=6
[2026-01-23 21:47:51] Starting ATLAS job with PandaID=6978164888
[2026-01-23 21:47:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-23 23:25:20]  *** The last 200 lines of the pilot log: ***
[2026-01-23 23:25:20]  filesize=302804
[2026-01-23 23:25:20]  filetype=log
[2026-01-23 23:25:20]  guid=51f9b610-8867-45ac-b694-0f1d17ec5dec
[2026-01-23 23:25:20]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-01-23 23:25:20]  is_altstaged=None
[2026-01-23 23:25:20]  is_tar=False
[2026-01-23 23:25:20]  lfn=log.48310670._002708.job.log.tgz.1
[2026-01-23 23:25:20]  mtime=0
[2026-01-23 23:25:20]  protocol_id=None
[2026-01-23 23:25:20]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-23 23:25:20]  replicas=None
[2026-01-23 23:25:20]  scope=mc23_13p6TeV
[2026-01-23 23:25:20]  status=None
[2026-01-23 23:25:20]  status_code=0
[2026-01-23 23:25:20]  storage_token=
[2026-01-23 23:25:20]  surl=/var/lib/boinc/slots/7/PanDA_Pilot-6978164888/log.48310670._002708.job.log.tgz.1
[2026-01-23 23:25:20]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/5f/6b/log.48310670._002708.job.log.tgz.1
[2026-01-23 23:25:20]  workdir=None
[2026-01-23 23:25:20] ]
[2026-01-23 23:25:20] 2026-01-23 14:24:27,923 | INFO     | transferring file log.48310670._002708.job.log.tgz.1 from /var/lib/boinc/slots/7/PanDA_Pilot-6978164888/log.48310670._002708.job.log.tgz.1 to /var/lib/boinc/slots/
[2026-01-23 23:25:20] 2026-01-23 14:24:27,924 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/7/PanDA_Pilot-6978164888/log.48310670._002708.job.log.tgz.1 /var/lib/boinc/slots/7/log.48310670._002708.job
[2026-01-23 23:25:20] 2026-01-23 14:24:27,941 | INFO     | adding to output.list: log.48310670._002708.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/5f/6b/log.48310670._002708.job.log.tg
[2026-01-23 23:25:20] 2026-01-23 14:24:27,942 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-23 23:25:20] 2026-01-23 14:24:27,942 | INFO     | summary of transferred files:
[2026-01-23 23:25:20] 2026-01-23 14:24:27,942 | INFO     |  -- lfn=log.48310670._002708.job.log.tgz.1, status_code=0, status=transferred
[2026-01-23 23:25:20] 2026-01-23 14:24:27,942 | INFO     | stage-out finished correctly
[2026-01-23 23:25:20] 2026-01-23 14:24:28,107 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-23 23:25:20] 2026-01-23 14:24:28,476 | INFO     | time since job start (5724s) is within the limit (349056.0s)
[2026-01-23 23:25:20] 2026-01-23 14:24:28,512 | INFO     | monitor loop #431: job 0:6978164888 is in state 'finished'
[2026-01-23 23:25:20] 2026-01-23 14:24:28,512 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-23 23:25:20] 2026-01-23 14:24:29,398 | INFO     | job 6978164888 has state=finished
[2026-01-23 23:25:20] 2026-01-23 14:24:29,398 | INFO     | preparing for final server update for job 6978164888 in state='finished'
[2026-01-23 23:25:20] 2026-01-23 14:24:29,398 | INFO     | reading metadata from: /var/lib/boinc/slots/7/PanDA_Pilot-6978164888/jobReport.json
[2026-01-23 23:25:20] 2026-01-23 14:24:29,400 | INFO     | added worker_node to metadata from /var/lib/boinc/slots/7/workernode_map.json
[2026-01-23 23:25:20] 2026-01-23 14:24:29,401 | INFO     | this job has now completed (state=finished)
[2026-01-23 23:25:20] 2026-01-23 14:24:29,401 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-23 23:25:20] 2026-01-23 14:24:29,401 | INFO     | log transfer has been attempted: DONE
[2026-01-23 23:25:20] 2026-01-23 14:24:29,401 | INFO     | job 6978164888 has finished - writing final server update
[2026-01-23 23:25:20] 2026-01-23 14:24:29,401 | INFO     | total number of processed events: 400 (read)
[2026-01-23 23:25:20] 2026-01-23 14:24:29,404 | INFO     | using path: /var/lib/boinc/slots/7/PanDA_Pilot-6978164888/memory_monitor_summary.json (trf name=prmon)
[2026-01-23 23:25:20] 2026-01-23 14:24:29,405 | INFO     | extracted standard info from prmon json
[2026-01-23 23:25:20] 2026-01-23 14:24:29,405 | INFO     | extracted standard memory fields from prmon json
[2026-01-23 23:25:20] 2026-01-23 14:24:29,405 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-23 23:25:20] 2026-01-23 14:24:29,405 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-23 23:25:20] 2026-01-23 14:24:29,405 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-23 23:25:20] 2026-01-23 14:24:29,407 | INFO     | fitting pss+swap vs Time
[2026-01-23 23:25:20] 2026-01-23 14:24:29,407 | INFO     | sum of square deviations: 204163828.0
[2026-01-23 23:25:20] 2026-01-23 14:24:29,408 | INFO     | sum of deviations: -583619513.0
[2026-01-23 23:25:20] 2026-01-23 14:24:29,408 | INFO     | mean x: 1769175495.0
[2026-01-23 23:25:20] 2026-01-23 14:24:29,408 | INFO     | mean y: 2457575.3103448274
[2026-01-23 23:25:20] 2026-01-23 14:24:29,408 | INFO     | intersect: 5059794866.24042
[2026-01-23 23:25:20] 2026-01-23 14:24:29,408 | INFO     | chi2: 0.01337633262838746
[2026-01-23 23:25:20] 2026-01-23 14:24:29,409 | INFO     | current memory leak: -2.86 B/s (using 87 data points, chi2=0.01)
[2026-01-23 23:25:20] 2026-01-23 14:24:29,409 | INFO     | could have reported an average CPU frequency of 3312 MHz (7 samples)
[2026-01-23 23:25:20] 2026-01-23 14:24:29,409 | INFO     | ..............................
[2026-01-23 23:25:20] 2026-01-23 14:24:29,409 | INFO     | . Timing measurements:
[2026-01-23 23:25:20] 2026-01-23 14:24:29,409 | INFO     | . get job = 0 s
[2026-01-23 23:25:20] 2026-01-23 14:24:29,409 | INFO     | . initial setup = 9 s
[2026-01-23 23:25:20] 2026-01-23 14:24:29,409 | INFO     | . payload setup = 6 s
[2026-01-23 23:25:20] 2026-01-23 14:24:29,409 | INFO     | . stage-in = 0 s
[2026-01-23 23:25:20] 2026-01-23 14:24:29,409 | INFO     | . payload execution = 5701 s
[2026-01-23 23:25:20] 2026-01-23 14:24:29,410 | INFO     | . stage-out = 0 s
[2026-01-23 23:25:20] 2026-01-23 14:24:29,410 | INFO     | . log creation = 0 s
[2026-01-23 23:25:20] 2026-01-23 14:24:29,410 | INFO     | ..............................
[2026-01-23 23:25:20] 2026-01-23 14:24:29,962 | INFO     | 
[2026-01-23 23:25:20] 2026-01-23 14:24:29,962 | INFO     | job summary report
[2026-01-23 23:25:20] 2026-01-23 14:24:29,962 | INFO     | --------------------------------------------------
[2026-01-23 23:25:20] 2026-01-23 14:24:29,962 | INFO     | PanDA job id: 6978164888
[2026-01-23 23:25:20] 2026-01-23 14:24:29,962 | INFO     | task id: 48310670
[2026-01-23 23:25:20] 2026-01-23 14:24:29,962 | INFO     | errors: (none)
[2026-01-23 23:25:20] 2026-01-23 14:24:29,962 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-23 23:25:20] 2026-01-23 14:24:29,962 | INFO     | pilot state: finished 
[2026-01-23 23:25:20] 2026-01-23 14:24:29,962 | INFO     | transexitcode: 0
[2026-01-23 23:25:20] 2026-01-23 14:24:29,963 | INFO     | exeerrorcode: 0
[2026-01-23 23:25:20] 2026-01-23 14:24:29,963 | INFO     | exeerrordiag: 
[2026-01-23 23:25:20] 2026-01-23 14:24:29,963 | INFO     | exitcode: 0
[2026-01-23 23:25:20] 2026-01-23 14:24:29,963 | INFO     | exitmsg: OK
[2026-01-23 23:25:20] 2026-01-23 14:24:29,963 | INFO     | cpuconsumptiontime: 31529 s
[2026-01-23 23:25:20] 2026-01-23 14:24:29,963 | INFO     | nevents: 400
[2026-01-23 23:25:20] 2026-01-23 14:24:29,963 | INFO     | neventsw: 0
[2026-01-23 23:25:20] 2026-01-23 14:24:29,963 | INFO     | pid: 1716790
[2026-01-23 23:25:20] 2026-01-23 14:24:29,963 | INFO     | pgrp: 1716790
[2026-01-23 23:25:20] 2026-01-23 14:24:29,963 | INFO     | corecount: 6
[2026-01-23 23:25:20] 2026-01-23 14:24:29,963 | INFO     | event service: False
[2026-01-23 23:25:20] 2026-01-23 14:24:29,963 | INFO     | sizes: {0: 2284241, 11: 2284241, 5711: 2311000, 5712: 2320054, 5713: 2320192}
[2026-01-23 23:25:20] 2026-01-23 14:24:29,964 | INFO     | --------------------------------------------------
[2026-01-23 23:25:20] 2026-01-23 14:24:29,964 | INFO     | 
[2026-01-23 23:25:20] 2026-01-23 14:24:29,964 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2026-01-23 23:25:20] 2026-01-23 14:24:29,984 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-23 23:25:20] 2026-01-23 14:24:29,984 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-23 23:25:20] 2026-01-23 14:24:29,984 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-23 23:25:20] 2026-01-23 14:24:29,984 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-23 23:25:20] 2026-01-23 14:24:29,985 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-23 23:25:20] 2026-01-23 14:24:29,985 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-23 23:25:20] 2026-01-23 14:24:29,985 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-23 23:25:20] 2026-01-23 14:24:29,985 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-23 23:25:20] 2026-01-23 14:24:29,985 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-23 23:25:20] 2026-01-23 14:24:29,985 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-23 23:25:20] 2026-01-23 14:24:29,985 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-23 23:25:20] 2026-01-23 14:24:29,985 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-23 23:25:20] 2026-01-23 14:24:29,985 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-23 23:25:20] 2026-01-23 14:24:29,985 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-23 23:25:20] 2026-01-23 14:24:29,986 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-23 23:25:20] 2026-01-23 14:24:29,986 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-23 23:25:20] 2026-01-23 14:24:29,986 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-23 23:25:20] 2026-01-23 14:24:29,986 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-23 23:25:20] 2026-01-23 14:24:29,986 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-23 23:25:20] 2026-01-23 14:24:29,986 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-23 23:25:20] 2026-01-23 14:24:29,986 | INFO     | job 6978164888 has completed (purged errors)
[2026-01-23 23:25:20] 2026-01-23 14:24:29,986 | INFO     | overall cleanup function is called
[2026-01-23 23:25:20] 2026-01-23 14:24:30,994 | INFO     | --- collectZombieJob: --- 10, [1716790]
[2026-01-23 23:25:20] 2026-01-23 14:24:30,994 | INFO     | zombie collector waiting for pid 1716790
[2026-01-23 23:25:20] 2026-01-23 14:24:30,994 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-23 23:25:20] 2026-01-23 14:24:30,994 | INFO     | collected zombie processes
[2026-01-23 23:25:20] 2026-01-23 14:24:30,994 | INFO     | will attempt to kill all subprocesses of pid=1716790
[2026-01-23 23:25:20] 2026-01-23 14:24:31,099 | INFO     | process IDs to be killed: [1716790] (in reverse order)
[2026-01-23 23:25:20] 2026-01-23 14:24:31,144 | WARNING  | found no corresponding commands to process id(s)
[2026-01-23 23:25:20] 2026-01-23 14:24:31,144 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-23 23:25:20] 2026-01-23 14:24:31,148 | INFO     | did not find any defunct processes belonging to 1716790
[2026-01-23 23:25:20] 2026-01-23 14:24:31,151 | INFO     | did not find any defunct processes belonging to 1716790
[2026-01-23 23:25:20] 2026-01-23 14:24:31,151 | INFO     | ready for new job
[2026-01-23 23:25:20] 2026-01-23 14:24:31,151 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-23 23:25:20] 2026-01-23 14:24:31,153 | INFO     | **************************************
[2026-01-23 23:25:20] 2026-01-23 14:24:31,153 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-23 23:25:20] 2026-01-23 14:24:31,153 | INFO     | **************************************
[2026-01-23 23:25:20] 2026-01-23 14:24:31,153 | INFO     | 
[2026-01-23 23:25:20] 2026-01-23 14:24:31,154 | INFO     | architecture information:
[2026-01-23 23:25:20] 2026-01-23 14:24:31,154 | INFO     | executing command: cat /etc/os-release
[2026-01-23 23:25:20] 2026-01-23 14:24:31,173 | INFO     | cat /etc/os-release:
[2026-01-23 23:25:20] NAME="CentOS Linux"
[2026-01-23 23:25:20] VERSION="7 (Core)"
[2026-01-23 23:25:20] ID="centos"
[2026-01-23 23:25:20] ID_LIKE="rhel fedora"
[2026-01-23 23:25:20] VERSION_ID="7"
[2026-01-23 23:25:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-23 23:25:20] ANSI_COLOR="0;31"
[2026-01-23 23:25:20] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-23 23:25:20] HOME_URL="https://www.centos.org/"
[2026-01-23 23:25:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-23 23:25:20] 
[2026-01-23 23:25:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-23 23:25:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-23 23:25:20] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-23 23:25:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-23 23:25:20] 
[2026-01-23 23:25:20] 2026-01-23 14:24:31,173 | INFO     | **************************************
[2026-01-23 23:25:20] 2026-01-23 14:24:31,676 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2026-01-23 23:25:20] 2026-01-23 14:24:31,690 | INFO     | sufficient remaining disk space (96039075840 B)
[2026-01-23 23:25:20] 2026-01-23 14:24:31,690 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-23 23:25:20] 2026-01-23 14:24:31,690 | INFO     | current server update state: UPDATING_FINAL
[2026-01-23 23:25:20] 2026-01-23 14:24:31,690 | INFO     | update_server=False
[2026-01-23 23:25:20] 2026-01-23 14:24:31,691 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-23 23:25:20] 2026-01-23 14:24:31,691 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-23 23:25:20] 2026-01-23 14:24:31,716 | INFO     | all payload control threads have been joined
[2026-01-23 23:25:20] 2026-01-23 14:24:31,894 | INFO     | job.realtimelogging is not enabled
[2026-01-23 23:25:20] 2026-01-23 14:24:32,020 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-23 23:25:20] 2026-01-23 14:24:32,020 | INFO     | aborting loop
[2026-01-23 23:25:20] 2026-01-23 14:24:32,419 | INFO     | all data control threads have been joined
[2026-01-23 23:25:20] 2026-01-23 14:24:32,696 | INFO     | [job] retrieve thread has finished
[2026-01-23 23:25:20] 2026-01-23 14:24:32,721 | INFO     | [payload] control thread has finished
[2026-01-23 23:25:20] 2026-01-23 14:24:32,800 | INFO     | [payload] validate_pre thread has finished
[2026-01-23 23:25:20] 2026-01-23 14:24:32,896 | INFO     | all job control threads have been joined
[2026-01-23 23:25:20] 2026-01-23 14:24:32,899 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-23 23:25:20] 2026-01-23 14:24:32,906 | INFO     | [job] create_data_payload thread has finished
[2026-01-23 23:25:20] 2026-01-23 14:24:33,025 | INFO     | [job] job monitor thread has finished
[2026-01-23 23:25:20] 2026-01-23 14:24:33,030 | INFO     | [payload] validate_post thread has finished
[2026-01-23 23:25:20] 2026-01-23 14:24:33,303 | INFO     | [data] copytool_in thread has finished
[2026-01-23 23:25:20] 2026-01-23 14:24:33,424 | INFO     | [data] control thread has finished
[2026-01-23 23:25:20] 2026-01-23 14:24:33,434 | INFO     | [payload] failed_post thread has finished
[2026-01-23 23:25:20] 2026-01-23 14:24:33,696 | INFO     | [data] copytool_out thread has finished
[2026-01-23 23:25:20] 2026-01-23 14:24:33,901 | INFO     | [job] control thread has finished
[2026-01-23 23:25:20] 2026-01-23 14:24:34,147 | INFO     | [payload] execute_payloads thread has finished
[2026-01-23 23:25:20] 2026-01-23 14:24:34,169 | INFO     | [job] validate thread has finished
[2026-01-23 23:25:20] 2026-01-23 14:24:34,196 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-23 23:25:20] 2026-01-23 14:24:34,509 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-23 23:25:20] 2026-01-23 14:24:35,514 | INFO     | [job] queue monitor thread has finished
[2026-01-23 23:25:20] 2026-01-23 14:24:38,201 | INFO     | [data] queue_monitor thread has finished
[2026-01-23 23:25:20] 2026-01-23 14:25:01,664 | INFO     | PID=1712192 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-23 23:25:20] 2026-01-23 14:25:01,665 | INFO     | .. there are 2 such processes running
[2026-01-23 23:25:20] 2026-01-23 14:25:01,665 | INFO     | found 0 job(s) in 20 queues
[2026-01-23 23:25:20] 2026-01-23 14:25:01,665 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-23 23:25:20] 2026-01-23 14:25:01,665 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-23 23:25:20] 2026-01-23 14:25:13,787 | INFO     | [monitor] cgroup control has ended
[2026-01-23 23:25:20] 2026-01-23 14:25:15,591 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139991783241536)>', '<ExcThread(monitor, started 139991422326528)>']
[2026-01-23 23:25:20] 2026-01-23 14:25:15,731 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-23 23:25:20] 2026-01-23 14:25:15,731 | INFO     | [monitor] control thread has ended
[2026-01-23 23:25:20] 2026-01-23 14:25:20,616 | INFO     | all workflow threads have been joined
[2026-01-23 23:25:20] 2026-01-23 14:25:20,616 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-23 23:25:20] 2026-01-23 14:25:20,616 | INFO     | traces error code: 0
[2026-01-23 23:25:20] 2026-01-23 14:25:20,616 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-23 23:25:20] 2026-01-23 14:25:20,720 [wrapper] ==== pilot stdout END ====
[2026-01-23 23:25:20] 2026-01-23 14:25:20,723 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-23 23:25:20] 2026-01-23 14:25:20,726 [wrapper] pilotpid: 1712192
[2026-01-23 23:25:20] 2026-01-23 14:25:20,728 [wrapper] Pilot exit status: 0
[2026-01-23 23:25:20] 2026-01-23 14:25:20,738 [wrapper] pandaids: 6978164888
[2026-01-23 23:25:20] 2026-01-23 14:25:20,765 [wrapper] cleanup supervisor_pilot 1735343 1712193
[2026-01-23 23:25:20] 2026-01-23 14:25:20,768 [wrapper] Test setup, not cleaning
[2026-01-23 23:25:20] 2026-01-23 14:25:20,771 [wrapper] apfmon messages muted
[2026-01-23 23:25:20] 2026-01-23 14:25:20,773 [wrapper] ==== wrapper stdout END ====
[2026-01-23 23:25:20] 2026-01-23 14:25:20,776 [wrapper] ==== wrapper stderr END ====
[2026-01-23 23:25:20]  *** Error codes and diagnostics ***
[2026-01-23 23:25:20]     "exeErrorCode": 0,
[2026-01-23 23:25:20]     "exeErrorDiag": "",
[2026-01-23 23:25:20]     "pilotErrorCode": 0,
[2026-01-23 23:25:20]     "pilotErrorDiag": "",
[2026-01-23 23:25:20]  *** Listing of results directory ***
[2026-01-23 23:25:20] total 663652
[2026-01-23 23:25:20] -rw-r--r--. 1 boinc boinc    584422 Jan 23 12:26 pilot3.tar.gz
[2026-01-23 23:25:20] -rwx------. 1 boinc boinc     36322 Jan 23 12:26 runpilot2-wrapper.sh
[2026-01-23 23:25:20] -rw-r--r--. 1 boinc boinc      5111 Jan 23 12:26 queuedata.json
[2026-01-23 23:25:20] -rw-r--r--. 1 boinc boinc       100 Jan 23 21:47 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-23 23:25:20] -rwxr-xr-x. 1 boinc boinc      7986 Jan 23 21:47 run_atlas
[2026-01-23 23:25:20] -rw-r--r--. 1 boinc boinc       105 Jan 23 21:47 job.xml
[2026-01-23 23:25:20] -rw-r--r--. 2 boinc boinc 497008515 Jan 23 21:47 EVNT.48310665._000051.pool.root.1
[2026-01-23 23:25:20] -rw-r--r--. 1 boinc boinc      9356 Jan 23 21:47 init_data.xml
[2026-01-23 23:25:20] -rw-r--r--. 2 boinc boinc     15845 Jan 23 21:47 start_atlas.sh
[2026-01-23 23:25:20] drwxrwx--x. 2 boinc boinc        68 Jan 23 21:47 shared
[2026-01-23 23:25:20] -rw-r--r--. 2 boinc boinc    597744 Jan 23 21:47 input.tar.gz
[2026-01-23 23:25:20] -rw-r--r--. 1 boinc boinc         0 Jan 23 21:47 boinc_lockfile
[2026-01-23 23:25:20] -rw-r--r--. 1 boinc boinc      2523 Jan 23 21:47 pandaJob.out
[2026-01-23 23:25:20] -rw-------. 1 boinc boinc   1003905 Jan 23 21:48 agis_schedconf.cvmfs.json
[2026-01-23 23:25:20] -rw-------. 1 boinc boinc   1516246 Jan 23 21:48 agis_ddmendpoints.agis.ALL.json
[2026-01-23 23:25:20] -rw-------. 1 boinc boinc       424 Jan 23 21:49 workernode_map.json
[2026-01-23 23:25:20] drwx------. 5 boinc boinc      4096 Jan 23 21:49 pilot3
[2026-01-23 23:25:20] -rw-------. 1 boinc boinc 176362050 Jan 23 23:23 HITS.48310670._002708.pool.root.1
[2026-01-23 23:25:20] -rw-r--r--. 1 boinc boinc       530 Jan 23 23:24 boinc_task_state.xml
[2026-01-23 23:25:20] -rw-------. 1 boinc boinc      1023 Jan 23 23:24 memory_monitor_summary.json
[2026-01-23 23:25:20] -rw-------. 1 boinc boinc        95 Jan 23 23:24 pilot_heartbeat.json
[2026-01-23 23:25:20] -rw-------. 1 boinc boinc    302804 Jan 23 23:24 log.48310670._002708.job.log.tgz.1
[2026-01-23 23:25:20] -rw-------. 1 boinc boinc      6300 Jan 23 23:24 heartbeat.json
[2026-01-23 23:25:20] -rw-r--r--. 1 boinc boinc        27 Jan 23 23:25 wrapper_checkpoint.txt
[2026-01-23 23:25:20] -rw-r--r--. 1 boinc boinc      8192 Jan 23 23:25 boinc_mmap_file
[2026-01-23 23:25:20] -rw-------. 1 boinc boinc      4891 Jan 23 23:25 pilotlog.txt
[2026-01-23 23:25:20] -rw-------. 1 boinc boinc    837760 Jan 23 23:25 log.48310670._002708.job.log.1
[2026-01-23 23:25:20] -rw-------. 1 boinc boinc       357 Jan 23 23:25 output.list
[2026-01-23 23:25:20] -rw-r--r--. 1 boinc boinc       620 Jan 23 23:25 runtime_log
[2026-01-23 23:25:20] -rw-------. 1 boinc boinc   1157120 Jan 23 23:25 result.tar.gz
[2026-01-23 23:25:20] -rw-r--r--. 1 boinc boinc      8774 Jan 23 23:25 runtime_log.err
[2026-01-23 23:25:20] -rw-------. 1 boinc boinc       643 Jan 23 23:25 9SwKDmVzM38nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmFk1KDmh9eDbm.diag
[2026-01-23 23:25:20] -rw-r--r--. 1 boinc boinc     20843 Jan 23 23:25 stderr.txt
[2026-01-23 23:25:20] HITS file was successfully produced:
[2026-01-23 23:25:20] -rw-------. 1 boinc boinc 176362050 Jan 23 23:23 shared/HITS.pool.root.1
[2026-01-23 23:25:20]  *** Contents of shared directory: ***
[2026-01-23 23:25:20] total 659324
[2026-01-23 23:25:20] -rw-r--r--. 2 boinc boinc 497008515 Jan 23 21:47 ATLAS.root_0
[2026-01-23 23:25:20] -rw-r--r--. 2 boinc boinc     15845 Jan 23 21:47 start_atlas.sh
[2026-01-23 23:25:20] -rw-r--r--. 2 boinc boinc    597744 Jan 23 21:47 input.tar.gz
[2026-01-23 23:25:20] -rw-------. 1 boinc boinc 176362050 Jan 23 23:23 HITS.pool.root.1
[2026-01-23 23:25:20] -rw-------. 1 boinc boinc   1157120 Jan 23 23:25 result.tar.gz
23:25:21 (1708052): run_atlas exited; CPU time 31580.581761
23:25:21 (1708052): called boinc_finish(0)

</stderr_txt>
]]>

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