Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
14:37:55 (57101): wrapper (7.7.26015): starting
14:37:55 (57101): wrapper: running run_atlas (--nthreads 4)
[2026-01-28 14:37:55] Arguments: --nthreads 4
[2026-01-28 14:37:55] Threads: 4
[2026-01-28 14:37:55] Checking for CVMFS
[2026-01-28 14:37:55] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-28 14:37:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-28 14:37:56] Running cvmfs_config stat atlas.cern.ch
[2026-01-28 14:37:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-28 14:37:56] 2.9.2.0 3129 273 63396 155622 2 188 30649402 36864000 0 130560 0 153580 99.987 6995 3361 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-01-28 14:37:56] CVMFS is ok
[2026-01-28 14:37:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-28 14:37:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-28 14:37:56] Further information can be found at the LHC@home message board.
[2026-01-28 14:37:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-28 14:37:56] Checking for apptainer binary...
[2026-01-28 14:37:56] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-28 14:37:56] Running /usr/bin/apptainer --version
[2026-01-28 14:37:56] apptainer version 1.4.1-1.1
[2026-01-28 14:37:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-28 14:37:56] thA373a
[2026-01-28 14:37:56] apptainer works
[2026-01-28 14:37:56] Set ATHENA_PROC_NUMBER=4
[2026-01-28 14:37:56] Set ATHENA_CORE_NUMBER=4
[2026-01-28 14:37:56] Starting ATLAS job with PandaID=6978165025
[2026-01-28 14:37:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-28 15:44:21]  *** The last 200 lines of the pilot log: ***
[2026-01-28 15:44:21] 2026-01-28 14:43:43,747 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-28 15:44:21] 2026-01-28 14:43:43,827 | INFO     | [job] queue monitor thread has finished
[2026-01-28 15:44:21] 2026-01-28 14:43:43,827 | INFO     | [job] retrieve thread has finished
[2026-01-28 15:44:21] 2026-01-28 14:43:43,828 | INFO     | [job] job monitor thread has finished
[2026-01-28 15:44:21] 2026-01-28 14:43:43,895 | INFO     | [job] control thread has finished
[2026-01-28 15:44:21] 2026-01-28 14:43:43,950 | INFO     | [data] control thread has finished
[2026-01-28 15:44:21] 2026-01-28 14:43:44,193 | INFO     | [payload] control thread has finished
[2026-01-28 15:44:21] 2026-01-28 14:43:44,279 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-28 15:44:21] 2026-01-28 14:43:44,325 | INFO     | [payload] failed_post thread has finished
[2026-01-28 15:44:21] 2026-01-28 14:43:44,660 | INFO     | [job] validate thread has finished
[2026-01-28 15:44:21] 2026-01-28 14:43:44,694 | INFO     | [job] create_data_payload thread has finished
[2026-01-28 15:44:21] 2026-01-28 14:43:44,838 | INFO     | [payload] execute_payloads thread has finished
[2026-01-28 15:44:21] 2026-01-28 14:43:44,856 | INFO     | [payload] validate_pre thread has finished
[2026-01-28 15:44:21] 2026-01-28 14:43:45,022 | INFO     | [data] copytool_in thread has finished
[2026-01-28 15:44:21] 2026-01-28 14:43:45,276 | INFO     | [payload] validate_post thread has finished
[2026-01-28 15:44:21] 2026-01-28 14:43:45,753 | INFO     | [data] copytool_out thread has finished
[2026-01-28 15:44:21] 2026-01-28 14:43:48,286 | INFO     | [data] queue_monitor thread has finished
[2026-01-28 15:44:21] 2026-01-28 14:43:53,694 | INFO     | job.realtimelogging is not enabled
[2026-01-28 15:44:21] 2026-01-28 14:43:54,700 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-28 15:44:21] 2026-01-28 14:44:13,677 | INFO     | PID=61206 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-28 15:44:21] 2026-01-28 14:44:13,678 | INFO     | found 0 job(s) in 20 queues
[2026-01-28 15:44:21] 2026-01-28 14:44:13,678 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-28 15:44:21] 2026-01-28 14:44:13,678 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-28 15:44:21] 2026-01-28 14:44:14,025 | INFO     | [monitor] cgroup control has ended
[2026-01-28 15:44:21] 2026-01-28 14:44:15,823 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140278342616896)>', '<ExcThread(monitor, started 140277096367872)>']
[2026-01-28 15:44:21] 2026-01-28 14:44:16,694 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-28 15:44:21] 2026-01-28 14:44:16,694 | INFO     | [monitor] control thread has ended
[2026-01-28 15:44:21] 2026-01-28 14:44:20,848 | INFO     | all workflow threads have been joined
[2026-01-28 15:44:21] 2026-01-28 14:44:20,849 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-28 15:44:21] 2026-01-28 14:44:20,849 | INFO     | traces error code: 0
[2026-01-28 15:44:21] 2026-01-28 14:44:20,849 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-28 15:44:21] 2026-01-28 14:44:20,925 [wrapper] ==== pilot stdout END ====
[2026-01-28 15:44:21] 2026-01-28 14:44:20,929 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-28 15:44:21] 2026-01-28 14:44:20,934 [wrapper] pilotpid: 61206
[2026-01-28 15:44:21] 2026-01-28 14:44:20,937 [wrapper] Pilot exit status: 0
[2026-01-28 15:44:21] 2026-01-28 14:44:20,949 [wrapper] pandaids: 6978165025
[2026-01-28 15:44:21] 2026-01-28 14:44:20,971 [wrapper] cleanup supervisor_pilot   70750 61207
[2026-01-28 15:44:21] 2026-01-28 14:44:20,974 [wrapper] Test setup, not cleaning
[2026-01-28 15:44:21] 2026-01-28 14:44:20,979 [wrapper] apfmon messages muted
[2026-01-28 15:44:21] 2026-01-28 14:44:20,982 [wrapper] ==== wrapper stdout END ====
[2026-01-28 15:44:21] 2026-01-28 14:44:20,986 [wrapper] ==== wrapper stderr END ====
[2026-01-28 15:44:21]  *** Error codes and diagnostics ***
[2026-01-28 15:44:21]     "exeErrorCode": 0,
[2026-01-28 15:44:21]     "exeErrorDiag": "",
[2026-01-28 15:44:21]     "pilotErrorCode": 0,
[2026-01-28 15:44:21]     "pilotErrorDiag": "",
[2026-01-28 15:44:21]  *** Listing of results directory ***
[2026-01-28 15:44:21] total 664572
[2026-01-28 15:44:21] -rw-r--r-- 1 boinc boinc    584422 Jan 23 04:26 pilot3.tar.gz
[2026-01-28 15:44:21] -rw-r--r-- 1 boinc boinc      5111 Jan 23 04:26 queuedata.json
[2026-01-28 15:44:21] -rwx------ 1 boinc boinc     36322 Jan 23 04:26 runpilot2-wrapper.sh
[2026-01-28 15:44:21] -rw-r--r-- 1 boinc boinc       100 Jan 28 14:37 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-28 15:44:21] -rwxr-xr-x 1 boinc boinc      7986 Jan 28 14:37 run_atlas
[2026-01-28 15:44:21] -rw-r--r-- 1 boinc boinc       105 Jan 28 14:37 job.xml
[2026-01-28 15:44:21] -rw-r--r-- 2 boinc boinc 495625724 Jan 28 14:37 EVNT.48310665._000057.pool.root.1
[2026-01-28 15:44:21] drwxrwx--x 2 boinc boinc      4096 Jan 28 14:37 shared
[2026-01-28 15:44:21] -rw-r--r-- 2 boinc boinc    597754 Jan 28 14:37 input.tar.gz
[2026-01-28 15:44:21] -rw-r--r-- 2 boinc boinc     15845 Jan 28 14:37 start_atlas.sh
[2026-01-28 15:44:21] -rw-r--r-- 1 boinc boinc         0 Jan 28 14:37 boinc_setup_complete
[2026-01-28 15:44:21] -rw-r--r-- 1 boinc boinc      6377 Jan 28 14:37 init_data.xml
[2026-01-28 15:44:21] -rw-r--r-- 1 boinc boinc         0 Jan 28 14:37 boinc_lockfile
[2026-01-28 15:44:21] -rw-r--r-- 1 boinc boinc      2524 Jan 28 14:37 pandaJob.out
[2026-01-28 15:44:21] -rw------- 1 boinc boinc   1005192 Jan 28 14:38 agis_schedconf.cvmfs.json
[2026-01-28 15:44:21] -rw------- 1 boinc boinc   1516246 Jan 28 14:38 agis_ddmendpoints.agis.ALL.json
[2026-01-28 15:44:21] -rw------- 1 boinc boinc       421 Jan 28 14:38 workernode_map.json
[2026-01-28 15:44:21] drwx------ 5 boinc boinc      4096 Jan 28 14:38 pilot3
[2026-01-28 15:44:21] -rw------- 1 boinc boinc 179221627 Jan 28 15:43 HITS.48310670._002845.pool.root.1
[2026-01-28 15:44:21] -rw-r--r-- 1 boinc boinc       530 Jan 28 15:43 boinc_task_state.xml
[2026-01-28 15:44:21] -rw------- 1 boinc boinc        95 Jan 28 15:43 pilot_heartbeat.json
[2026-01-28 15:44:21] -rw------- 1 boinc boinc      1035 Jan 28 15:43 memory_monitor_summary.json
[2026-01-28 15:44:21] -rw------- 1 boinc boinc    290701 Jan 28 15:43 log.48310670._002845.job.log.tgz.1
[2026-01-28 15:44:21] -rw------- 1 boinc boinc      6317 Jan 28 15:43 heartbeat.json
[2026-01-28 15:44:21] -rw-r--r-- 1 boinc boinc      8192 Jan 28 15:43 boinc_mmap_file
[2026-01-28 15:44:21] -rw-r--r-- 1 boinc boinc        27 Jan 28 15:43 wrapper_checkpoint.txt
[2026-01-28 15:44:21] -rw------- 1 boinc boinc      4818 Jan 28 15:44 pilotlog.txt
[2026-01-28 15:44:21] -rw------- 1 boinc boinc    585573 Jan 28 15:44 log.48310670._002845.job.log.1
[2026-01-28 15:44:21] -rw------- 1 boinc boinc       357 Jan 28 15:44 output.list
[2026-01-28 15:44:21] -rw-r--r-- 1 boinc boinc       620 Jan 28 15:44 runtime_log
[2026-01-28 15:44:21] -rw------- 1 boinc boinc    890880 Jan 28 15:44 result.tar.gz
[2026-01-28 15:44:21] -rw-r--r-- 1 boinc boinc      8901 Jan 28 15:44 runtime_log.err
[2026-01-28 15:44:21] -rw------- 1 boinc boinc       658 Jan 28 15:44 nuyNDmVzM38nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmkl1KDmODdA9n.diag
[2026-01-28 15:44:21] -rw-r--r-- 1 boinc boinc      6642 Jan 28 15:44 stderr.txt
[2026-01-28 15:44:21] HITS file was successfully produced:
[2026-01-28 15:44:21] -rw------- 1 boinc boinc 179221627 Jan 28 15:43 shared/HITS.pool.root.1
[2026-01-28 15:44:21]  *** Contents of shared directory: ***
[2026-01-28 15:44:21] total 660516
[2026-01-28 15:44:21] -rw-r--r-- 2 boinc boinc 495625724 Jan 28 14:37 ATLAS.root_0
[2026-01-28 15:44:21] -rw-r--r-- 2 boinc boinc    597754 Jan 28 14:37 input.tar.gz
[2026-01-28 15:44:21] -rw-r--r-- 2 boinc boinc     15845 Jan 28 14:37 start_atlas.sh
[2026-01-28 15:44:21] -rw------- 1 boinc boinc 179221627 Jan 28 15:43 HITS.pool.root.1
[2026-01-28 15:44:21] -rw------- 1 boinc boinc    890880 Jan 28 15:44 result.tar.gz
15:44:22 (57101): run_atlas exited; CPU time 14719.240000
15:44:22 (57101): called boinc_finish(0)

</stderr_txt>
]]>

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