Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
14:04:43 (8738): wrapper (7.7.26015): starting
14:04:43 (8738): wrapper: running run_atlas (--nthreads 8)
[2026-01-23 14:04:43] Arguments: --nthreads 8
[2026-01-23 14:04:43] Threads: 8
[2026-01-23 14:04:43] Checking for CVMFS
[2026-01-23 14:04:43] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-23 14:04:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-23 14:04:43] Running cvmfs_config stat atlas.cern.ch
[2026-01-23 14:04:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-23 14:04:43] 2.11.0.0 7894 149214 120152 155431 1 1 3988253 4096001 0 130560 3 20629452 99.772 9228654 464 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://141.99.253.245:3128 1
[2026-01-23 14:04:43] CVMFS is ok
[2026-01-23 14:04:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-23 14:04:43] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-23 14:04:43] Further information can be found at the LHC@home message board.
[2026-01-23 14:04:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-23 14:04:43] Checking for apptainer binary...
[2026-01-23 14:04:43] /usr/bin/which: no apptainer in (/opt/ohpc/pub/libs/singularity/3.7.1/bin:/cm/shared/apps/slurm/current/sbin:/cm/shared/apps/slurm/current/bin:/home/mf493845/.local/bin:/home/mf493845/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin)
[2026-01-23 14:04:43] apptainer is not installed, using version from CVMFS
[2026-01-23 14:04:43] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-23 14:04:43] WARNING: Environment variable TMPDIR already has value [/tmp/job_11040609/atlas/pilot/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment hpc-node075
[2026-01-23 14:04:43] apptainer works
[2026-01-23 14:04:43] Set ATHENA_PROC_NUMBER=8
[2026-01-23 14:04:43] Set ATHENA_CORE_NUMBER=8
[2026-01-23 14:04:43] Starting ATLAS job with PandaID=6977947607
[2026-01-23 14:04:43] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/tmp/job_11040609/atlas/pilot/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-23 15:01:21]  *** The last 200 lines of the pilot log: ***
[2026-01-23 15:01:21]  filetype=log
[2026-01-23 15:01:21]  guid=787ea0d3-f8ed-47fc-b2f1-bbd49d604b31
[2026-01-23 15:01:21]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-01-23 15:01:21]  is_altstaged=None
[2026-01-23 15:01:21]  is_tar=False
[2026-01-23 15:01:21]  lfn=log.48299677._000188.job.log.tgz.1
[2026-01-23 15:01:21]  mtime=0
[2026-01-23 15:01:21]  protocol_id=None
[2026-01-23 15:01:21]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-23 15:01:21]  replicas=None
[2026-01-23 15:01:21]  scope=mc23_13p6TeV
[2026-01-23 15:01:21]  status=None
[2026-01-23 15:01:21]  status_code=0
[2026-01-23 15:01:21]  storage_token=
[2026-01-23 15:01:21]  surl=/tmp/job_11040609/atlas/pilot/slots/0/PanDA_Pilot-6977947607/log.48299677._000188.job.log.tgz.1
[2026-01-23 15:01:21]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b4/6b/log.48299677._000188.job.log.tgz.1
[2026-01-23 15:01:21]  workdir=None
[2026-01-23 15:01:21] ]
[2026-01-23 15:01:21] 2026-01-23 14:00:44,608 | INFO     | transferring file log.48299677._000188.job.log.tgz.1 from /tmp/job_11040609/atlas/pilot/slots/0/PanDA_Pilot-6977947607/log.48299677._000188.job.log.tgz.1 to /tmp/j
[2026-01-23 15:01:21] 2026-01-23 14:00:44,608 | INFO     | executing command: /usr/bin/env mv /tmp/job_11040609/atlas/pilot/slots/0/PanDA_Pilot-6977947607/log.48299677._000188.job.log.tgz.1 /tmp/job_11040609/atlas/pilot/sl
[2026-01-23 15:01:21] 2026-01-23 14:00:44,616 | INFO     | adding to output.list: log.48299677._000188.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b4/6b/log.48299677._000188.job.log.tg
[2026-01-23 15:01:21] 2026-01-23 14:00:44,617 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-23 15:01:21] 2026-01-23 14:00:44,617 | INFO     | summary of transferred files:
[2026-01-23 15:01:21] 2026-01-23 14:00:44,617 | INFO     |  -- lfn=log.48299677._000188.job.log.tgz.1, status_code=0, status=transferred
[2026-01-23 15:01:21] 2026-01-23 14:00:44,617 | INFO     | stage-out finished correctly
[2026-01-23 15:01:21] 2026-01-23 14:00:45,588 | INFO     | monitor loop #255: job 0:6977947607 is in state 'finished'
[2026-01-23 15:01:21] 2026-01-23 14:00:45,588 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-23 15:01:21] 2026-01-23 14:00:46,263 | INFO     | time since job start (3355s) is within the limit (349056.0s)
[2026-01-23 15:01:21] 2026-01-23 14:00:46,764 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-23 15:01:21] 2026-01-23 14:00:48,091 | INFO     | monitor loop #256: job 0:6977947607 is in state 'finished'
[2026-01-23 15:01:21] 2026-01-23 14:00:48,091 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-23 15:01:21] 2026-01-23 14:00:48,268 | INFO     | time since job start (3357s) is within the limit (349056.0s)
[2026-01-23 15:01:21] 2026-01-23 14:00:49,312 | INFO     | job 6977947607 has state=finished
[2026-01-23 15:01:21] 2026-01-23 14:00:49,312 | INFO     | preparing for final server update for job 6977947607 in state='finished'
[2026-01-23 15:01:21] 2026-01-23 14:00:49,312 | INFO     | reading metadata from: /tmp/job_11040609/atlas/pilot/slots/0/PanDA_Pilot-6977947607/jobReport.json
[2026-01-23 15:01:21] 2026-01-23 14:00:49,314 | INFO     | added worker_node to metadata from /tmp/job_11040609/atlas/pilot/slots/0/workernode_map.json
[2026-01-23 15:01:21] 2026-01-23 14:00:49,314 | INFO     | this job has now completed (state=finished)
[2026-01-23 15:01:21] 2026-01-23 14:00:49,314 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-23 15:01:21] 2026-01-23 14:00:49,314 | INFO     | log transfer has been attempted: DONE
[2026-01-23 15:01:21] 2026-01-23 14:00:49,314 | INFO     | job 6977947607 has finished - writing final server update
[2026-01-23 15:01:21] 2026-01-23 14:00:49,314 | INFO     | total number of processed events: 400 (read)
[2026-01-23 15:01:21] 2026-01-23 14:00:49,331 | INFO     | using path: /tmp/job_11040609/atlas/pilot/slots/0/PanDA_Pilot-6977947607/memory_monitor_summary.json (trf name=prmon)
[2026-01-23 15:01:21] 2026-01-23 14:00:49,332 | INFO     | extracted standard info from prmon json
[2026-01-23 15:01:21] 2026-01-23 14:00:49,332 | INFO     | extracted standard memory fields from prmon json
[2026-01-23 15:01:21] 2026-01-23 14:00:49,332 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-23 15:01:21] 2026-01-23 14:00:49,332 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-23 15:01:21] 2026-01-23 14:00:49,332 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-23 15:01:21] 2026-01-23 14:00:49,333 | INFO     | fitting pss+swap vs Time
[2026-01-23 15:01:21] 2026-01-23 14:00:49,333 | INFO     | sum of square deviations: 34277852.0
[2026-01-23 15:01:21] 2026-01-23 14:00:49,333 | INFO     | sum of deviations: -2879538641.5
[2026-01-23 15:01:21] 2026-01-23 14:00:49,333 | INFO     | mean x: 1769175245.5
[2026-01-23 15:01:21] 2026-01-23 14:00:49,333 | INFO     | mean y: 2670618.5625
[2026-01-23 15:01:21] 2026-01-23 14:00:49,333 | INFO     | intersect: 148623665977.38776
[2026-01-23 15:01:21] 2026-01-23 14:00:49,333 | INFO     | chi2: 0.02354525240309371
[2026-01-23 15:01:21] 2026-01-23 14:00:49,333 | INFO     | current memory leak: -84.01 B/s (using 48 data points, chi2=0.02)
[2026-01-23 15:01:21] 2026-01-23 14:00:49,333 | INFO     | could have reported an average CPU frequency of 2380 MHz (5 samples)
[2026-01-23 15:01:21] 2026-01-23 14:00:49,333 | INFO     | ..............................
[2026-01-23 15:01:21] 2026-01-23 14:00:49,333 | INFO     | . Timing measurements:
[2026-01-23 15:01:21] 2026-01-23 14:00:49,333 | INFO     | . get job = 0 s
[2026-01-23 15:01:21] 2026-01-23 14:00:49,333 | INFO     | . initial setup = 2 s
[2026-01-23 15:01:21] 2026-01-23 14:00:49,333 | INFO     | . payload setup = 2 s
[2026-01-23 15:01:21] 2026-01-23 14:00:49,334 | INFO     | . stage-in = 0 s
[2026-01-23 15:01:21] 2026-01-23 14:00:49,334 | INFO     | . payload execution = 3335 s
[2026-01-23 15:01:21] 2026-01-23 14:00:49,334 | INFO     | . stage-out = 0 s
[2026-01-23 15:01:21] 2026-01-23 14:00:49,334 | INFO     | . log creation = 0 s
[2026-01-23 15:01:21] 2026-01-23 14:00:49,334 | INFO     | ..............................
[2026-01-23 15:01:21] 2026-01-23 14:00:49,380 | INFO     | 
[2026-01-23 15:01:21] 2026-01-23 14:00:49,380 | INFO     | job summary report
[2026-01-23 15:01:21] 2026-01-23 14:00:49,381 | INFO     | --------------------------------------------------
[2026-01-23 15:01:21] 2026-01-23 14:00:49,381 | INFO     | PanDA job id: 6977947607
[2026-01-23 15:01:21] 2026-01-23 14:00:49,381 | INFO     | task id: 48299677
[2026-01-23 15:01:21] 2026-01-23 14:00:49,381 | INFO     | errors: (none)
[2026-01-23 15:01:21] 2026-01-23 14:00:49,381 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-23 15:01:21] 2026-01-23 14:00:49,381 | INFO     | pilot state: finished 
[2026-01-23 15:01:21] 2026-01-23 14:00:49,381 | INFO     | transexitcode: 0
[2026-01-23 15:01:21] 2026-01-23 14:00:49,381 | INFO     | exeerrorcode: 0
[2026-01-23 15:01:21] 2026-01-23 14:00:49,381 | INFO     | exeerrordiag: 
[2026-01-23 15:01:21] 2026-01-23 14:00:49,381 | INFO     | exitcode: 0
[2026-01-23 15:01:21] 2026-01-23 14:00:49,381 | INFO     | exitmsg: OK
[2026-01-23 15:01:21] 2026-01-23 14:00:49,381 | INFO     | cpuconsumptiontime: 24504 s
[2026-01-23 15:01:21] 2026-01-23 14:00:49,381 | INFO     | nevents: 400
[2026-01-23 15:01:21] 2026-01-23 14:00:49,381 | INFO     | neventsw: 0
[2026-01-23 15:01:21] 2026-01-23 14:00:49,381 | INFO     | pid: 19385
[2026-01-23 15:01:21] 2026-01-23 14:00:49,381 | INFO     | pgrp: 19385
[2026-01-23 15:01:21] 2026-01-23 14:00:49,381 | INFO     | corecount: 8
[2026-01-23 15:01:21] 2026-01-23 14:00:49,381 | INFO     | event service: False
[2026-01-23 15:01:21] 2026-01-23 14:00:49,381 | INFO     | sizes: {0: 2283898, 1: 2284526, 11: 2284526, 3342: 2310289, 3343: 2319317, 3345: 2319373, 3348: 2319727}
[2026-01-23 15:01:21] 2026-01-23 14:00:49,381 | INFO     | --------------------------------------------------
[2026-01-23 15:01:21] 2026-01-23 14:00:49,381 | INFO     | 
[2026-01-23 15:01:21] 2026-01-23 14:00:49,381 | INFO     | executing command: ls -lF /tmp/job_11040609/atlas/pilot/slots/0
[2026-01-23 15:01:21] 2026-01-23 14:00:49,390 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-23 15:01:21] 2026-01-23 14:00:49,390 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-23 15:01:21] 2026-01-23 14:00:49,390 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-23 15:01:21] 2026-01-23 14:00:49,390 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-23 15:01:21] 2026-01-23 14:00:49,391 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-23 15:01:21] 2026-01-23 14:00:49,391 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-23 15:01:21] 2026-01-23 14:00:49,391 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-23 15:01:21] 2026-01-23 14:00:49,391 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-23 15:01:21] 2026-01-23 14:00:49,391 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-23 15:01:21] 2026-01-23 14:00:49,391 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-23 15:01:21] 2026-01-23 14:00:49,391 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-23 15:01:21] 2026-01-23 14:00:49,391 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-23 15:01:21] 2026-01-23 14:00:49,391 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-23 15:01:21] 2026-01-23 14:00:49,391 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-23 15:01:21] 2026-01-23 14:00:49,391 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-23 15:01:21] 2026-01-23 14:00:49,391 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-23 15:01:21] 2026-01-23 14:00:49,391 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-23 15:01:21] 2026-01-23 14:00:49,391 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-23 15:01:21] 2026-01-23 14:00:49,391 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-23 15:01:21] 2026-01-23 14:00:49,391 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-23 15:01:21] 2026-01-23 14:00:49,391 | INFO     | job 6977947607 has completed (purged errors)
[2026-01-23 15:01:21] 2026-01-23 14:00:49,391 | INFO     | overall cleanup function is called
[2026-01-23 15:01:21] 2026-01-23 14:00:50,397 | INFO     | --- collectZombieJob: --- 10, [19385]
[2026-01-23 15:01:21] 2026-01-23 14:00:50,397 | INFO     | zombie collector waiting for pid 19385
[2026-01-23 15:01:21] 2026-01-23 14:00:50,397 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-23 15:01:21] 2026-01-23 14:00:50,397 | INFO     | collected zombie processes
[2026-01-23 15:01:21] 2026-01-23 14:00:50,397 | INFO     | will attempt to kill all subprocesses of pid=19385
[2026-01-23 15:01:21] 2026-01-23 14:00:50,490 | INFO     | process IDs to be killed: [19385] (in reverse order)
[2026-01-23 15:01:21] 2026-01-23 14:00:50,522 | WARNING  | found no corresponding commands to process id(s)
[2026-01-23 15:01:21] 2026-01-23 14:00:50,522 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-23 15:01:21] 2026-01-23 14:00:50,526 | INFO     | did not find any defunct processes belonging to 19385
[2026-01-23 15:01:21] 2026-01-23 14:00:50,529 | INFO     | did not find any defunct processes belonging to 19385
[2026-01-23 15:01:21] 2026-01-23 14:00:50,529 | INFO     | ready for new job
[2026-01-23 15:01:21] 2026-01-23 14:00:50,529 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-23 15:01:21] 2026-01-23 14:00:50,530 | INFO     | **************************************
[2026-01-23 15:01:21] 2026-01-23 14:00:50,530 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-23 15:01:21] 2026-01-23 14:00:50,530 | INFO     | **************************************
[2026-01-23 15:01:21] 2026-01-23 14:00:50,530 | INFO     | 
[2026-01-23 15:01:21] 2026-01-23 14:00:50,543 | INFO     | architecture information:
[2026-01-23 15:01:21] 2026-01-23 14:00:50,543 | INFO     | executing command: cat /etc/os-release
[2026-01-23 15:01:21] 2026-01-23 14:00:50,549 | INFO     | cat /etc/os-release:
[2026-01-23 15:01:21] NAME="CentOS Linux"
[2026-01-23 15:01:21] VERSION="7 (Core)"
[2026-01-23 15:01:21] ID="centos"
[2026-01-23 15:01:21] ID_LIKE="rhel fedora"
[2026-01-23 15:01:21] VERSION_ID="7"
[2026-01-23 15:01:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-23 15:01:21] ANSI_COLOR="0;31"
[2026-01-23 15:01:21] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-23 15:01:21] HOME_URL="https://www.centos.org/"
[2026-01-23 15:01:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-23 15:01:21] 
[2026-01-23 15:01:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-23 15:01:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-23 15:01:21] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-23 15:01:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-23 15:01:21] 
[2026-01-23 15:01:21] 2026-01-23 14:00:50,549 | INFO     | **************************************
[2026-01-23 15:01:21] 2026-01-23 14:00:51,052 | INFO     | executing command: df -mP /tmp/job_11040609/atlas/pilot/slots/0
[2026-01-23 15:01:21] 2026-01-23 14:00:51,059 | INFO     | sufficient remaining disk space (223274336256 B)
[2026-01-23 15:01:21] 2026-01-23 14:00:51,059 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-23 15:01:21] 2026-01-23 14:00:51,059 | INFO     | current server update state: UPDATING_FINAL
[2026-01-23 15:01:21] 2026-01-23 14:00:51,059 | INFO     | update_server=False
[2026-01-23 15:01:21] 2026-01-23 14:00:51,059 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-23 15:01:21] 2026-01-23 14:00:51,059 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-23 15:01:21] 2026-01-23 14:00:51,059 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-23 15:01:21] 2026-01-23 14:00:51,114 | INFO     | all data control threads have been joined
[2026-01-23 15:01:21] 2026-01-23 14:00:51,599 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-23 15:01:21] 2026-01-23 14:00:51,599 | INFO     | aborting loop
[2026-01-23 15:01:21] 2026-01-23 14:00:51,637 | INFO     | all job control threads have been joined
[2026-01-23 15:01:21] 2026-01-23 14:00:52,064 | INFO     | [job] retrieve thread has finished
[2026-01-23 15:01:21] 2026-01-23 14:00:52,065 | INFO     | [job] queue monitor thread has finished
[2026-01-23 15:01:21] 2026-01-23 14:00:52,120 | INFO     | [data] control thread has finished
[2026-01-23 15:01:21] 2026-01-23 14:00:52,184 | INFO     | all payload control threads have been joined
[2026-01-23 15:01:21] 2026-01-23 14:00:52,350 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-23 15:01:21] 2026-01-23 14:00:52,585 | INFO     | [payload] validate_post thread has finished
[2026-01-23 15:01:21] 2026-01-23 14:00:52,604 | INFO     | [job] job monitor thread has finished
[2026-01-23 15:01:21] 2026-01-23 14:00:52,642 | INFO     | [job] control thread has finished
[2026-01-23 15:01:21] 2026-01-23 14:00:52,677 | INFO     | [job] validate thread has finished
[2026-01-23 15:01:21] 2026-01-23 14:00:52,739 | INFO     | [job] create_data_payload thread has finished
[2026-01-23 15:01:21] 2026-01-23 14:00:52,755 | INFO     | [payload] validate_pre thread has finished
[2026-01-23 15:01:21] 2026-01-23 14:00:52,817 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-23 15:01:21] 2026-01-23 14:00:53,065 | INFO     | [data] copytool_out thread has finished
[2026-01-23 15:01:21] 2026-01-23 14:00:53,131 | INFO     | [data] copytool_in thread has finished
[2026-01-23 15:01:21] 2026-01-23 14:00:53,189 | INFO     | [payload] control thread has finished
[2026-01-23 15:01:21] 2026-01-23 14:00:53,403 | INFO     | [payload] failed_post thread has finished
[2026-01-23 15:01:21] 2026-01-23 14:00:53,535 | INFO     | [payload] execute_payloads thread has finished
[2026-01-23 15:01:21] 2026-01-23 14:00:55,963 | INFO     | [monitor] cgroup control has ended
[2026-01-23 15:01:21] 2026-01-23 14:00:56,823 | INFO     | [data] queue_monitor thread has finished
[2026-01-23 15:01:21] 2026-01-23 14:00:57,309 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23456247945024)>', '<ExcThread(monitor, started 23456063182592)>']
[2026-01-23 15:01:21] 2026-01-23 14:01:02,334 | INFO     | all workflow threads have been joined
[2026-01-23 15:01:21] 2026-01-23 14:01:02,335 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-23 15:01:21] 2026-01-23 14:01:02,335 | INFO     | traces error code: 0
[2026-01-23 15:01:21] 2026-01-23 14:01:02,335 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-23 15:01:21] 2026-01-23 14:01:21,446 | INFO     | PID=13539 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-23 15:01:21] 2026-01-23 14:01:21,446 | INFO     | found 0 job(s) in 20 queues
[2026-01-23 15:01:21] 2026-01-23 14:01:21,447 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-23 15:01:21] 2026-01-23 14:01:21,447 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-23 15:01:21] 2026-01-23 14:01:21,447 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-23 15:01:21] 2026-01-23 14:01:21,447 | INFO     | [monitor] control thread has ended
[2026-01-23 15:01:21] 2026-01-23 14:01:21,502 [wrapper] ==== pilot stdout END ====
[2026-01-23 15:01:21] 2026-01-23 14:01:21,503 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-23 15:01:21] 2026-01-23 14:01:21,505 [wrapper] pilotpid: 13539
[2026-01-23 15:01:21] 2026-01-23 14:01:21,506 [wrapper] Pilot exit status: 0
[2026-01-23 15:01:21] 2026-01-23 14:01:21,510 [wrapper] pandaids: 6977947607
[2026-01-23 15:01:21] 2026-01-23 14:01:21,531 [wrapper] cleanup supervisor_pilot 17940 13540
[2026-01-23 15:01:21] 2026-01-23 14:01:21,532 [wrapper] Test setup, not cleaning
[2026-01-23 15:01:21] 2026-01-23 14:01:21,533 [wrapper] apfmon messages muted
[2026-01-23 15:01:21] 2026-01-23 14:01:21,534 [wrapper] ==== wrapper stdout END ====
[2026-01-23 15:01:21] 2026-01-23 14:01:21,535 [wrapper] ==== wrapper stderr END ====
[2026-01-23 15:01:21]  *** Error codes and diagnostics ***
[2026-01-23 15:01:21]     "exeErrorCode": 0,
[2026-01-23 15:01:21]     "exeErrorDiag": "",
[2026-01-23 15:01:21]     "pilotErrorCode": 0,
[2026-01-23 15:01:21]     "pilotErrorDiag": "",
[2026-01-23 15:01:21]  *** Listing of results directory ***
[2026-01-23 15:01:21] total 411080
[2026-01-23 15:01:21] -rw------- 1 mf493845 unix-user      5111 Jan 22 20:57 queuedata.json
[2026-01-23 15:01:21] -rw------- 1 mf493845 unix-user    584422 Jan 22 20:57 pilot3.tar.gz
[2026-01-23 15:01:21] -rwx------ 1 mf493845 unix-user     36322 Jan 22 20:57 runpilot2-wrapper.sh
[2026-01-23 15:01:21] -rw------- 1 mf493845 unix-user       100 Jan 23 13:01 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-23 15:01:21] -rwxr-xr-x 1 mf493845 unix-user      7986 Jan 23 13:01 run_atlas
[2026-01-23 15:01:21] -rw------- 1 mf493845 unix-user       105 Jan 23 13:01 job.xml
[2026-01-23 15:01:21] -rw-r--r-- 2 mf493845 unix-user     15845 Jan 23 14:04 start_atlas.sh
[2026-01-23 15:01:21] drwxrwx--x 2 mf493845 unix-user       100 Jan 23 14:04 shared
[2026-01-23 15:01:21] -rw-r--r-- 2 mf493845 unix-user    597776 Jan 23 14:04 input.tar.gz
[2026-01-23 15:01:21] -rw------- 1 mf493845 unix-user      6390 Jan 23 14:04 init_data.xml
[2026-01-23 15:01:21] -rw-r--r-- 2 mf493845 unix-user 250078181 Jan 23 14:04 EVNT.48299675._000004.pool.root.1
[2026-01-23 15:01:21] -rw------- 1 mf493845 unix-user         0 Jan 23 14:04 boinc_setup_complete
[2026-01-23 15:01:21] -rw------- 1 mf493845 unix-user      8192 Jan 23 14:04 boinc_mmap_file
[2026-01-23 15:01:21] -rw------- 1 mf493845 unix-user         0 Jan 23 14:04 boinc_lockfile
[2026-01-23 15:01:21] -rw------- 1 mf493845 unix-user      2622 Jan 23 14:04 pandaJob.out
[2026-01-23 15:01:21] -rw------- 1 mf493845 unix-user   1004198 Jan 23 14:04 agis_schedconf.cvmfs.json
[2026-01-23 15:01:21] -rw------- 1 mf493845 unix-user   1516246 Jan 23 14:04 agis_ddmendpoints.agis.ALL.json
[2026-01-23 15:01:21] -rw------- 1 mf493845 unix-user       416 Jan 23 14:04 workernode_map.json
[2026-01-23 15:01:21] drwx------ 5 mf493845 unix-user       440 Jan 23 14:04 pilot3
[2026-01-23 15:01:21] -rw------- 1 mf493845 unix-user 165308391 Jan 23 15:00 HITS.48299677._000188.pool.root.1
[2026-01-23 15:01:21] -rw------- 1 mf493845 unix-user        95 Jan 23 15:00 pilot_heartbeat.json
[2026-01-23 15:01:21] -rw------- 1 mf493845 unix-user      1016 Jan 23 15:00 memory_monitor_summary.json
[2026-01-23 15:01:21] -rw------- 1 mf493845 unix-user    306575 Jan 23 15:00 log.48299677._000188.job.log.tgz.1
[2026-01-23 15:01:21] -rw------- 1 mf493845 unix-user      6307 Jan 23 15:00 heartbeat.json
[2026-01-23 15:01:21] -rw------- 1 mf493845 unix-user       745 Jan 23 15:01 pilotlog.txt
[2026-01-23 15:01:21] -rw------- 1 mf493845 unix-user    520267 Jan 23 15:01 log.48299677._000188.job.log.1
[2026-01-23 15:01:21] -rw------- 1 mf493845 unix-user       357 Jan 23 15:01 output.list
[2026-01-23 15:01:21] -rw------- 1 mf493845 unix-user       620 Jan 23 15:01 runtime_log
[2026-01-23 15:01:21] -rw------- 1 mf493845 unix-user    839680 Jan 23 15:01 result.tar.gz
[2026-01-23 15:01:21] -rw------- 1 mf493845 unix-user      9219 Jan 23 15:01 runtime_log.err
[2026-01-23 15:01:21] -rw------- 1 mf493845 unix-user       644 Jan 23 15:01 JKCODmUzF38n9Rq4apOajLDm4fhM0noT9bVo0NGKDmoZuKDmw1ngQn.diag
[2026-01-23 15:01:21] -rw------- 1 mf493845 unix-user     21838 Jan 23 15:01 stderr.txt
[2026-01-23 15:01:21] HITS file was successfully produced:
[2026-01-23 15:01:21] -rw------- 1 mf493845 unix-user 165308391 Jan 23 15:00 shared/HITS.pool.root.1
[2026-01-23 15:01:21]  *** Contents of shared directory: ***
[2026-01-23 15:01:21] total 407076
[2026-01-23 15:01:21] -rw-r--r-- 2 mf493845 unix-user     15845 Jan 23 14:04 start_atlas.sh
[2026-01-23 15:01:21] -rw-r--r-- 2 mf493845 unix-user    597776 Jan 23 14:04 input.tar.gz
[2026-01-23 15:01:21] -rw-r--r-- 2 mf493845 unix-user 250078181 Jan 23 14:04 ATLAS.root_0
[2026-01-23 15:01:21] -rw------- 1 mf493845 unix-user 165308391 Jan 23 15:00 HITS.pool.root.1
[2026-01-23 15:01:21] -rw------- 1 mf493845 unix-user    839680 Jan 23 15:01 result.tar.gz
15:01:23 (8738): run_atlas exited; CPU time 24547.499092
15:01:23 (8738): called boinc_finish(0)

</stderr_txt>
]]>

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