Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
15:23:16 (102785): wrapper (7.7.26015): starting
15:23:16 (102785): wrapper: running run_atlas (--nthreads 4)
[2026-01-23 15:23:16] Arguments: --nthreads 4
[2026-01-23 15:23:16] Threads: 4
[2026-01-23 15:23:16] Checking for CVMFS
[2026-01-23 15:23:16] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-23 15:23:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-23 15:23:16] Running cvmfs_config stat atlas.cern.ch
[2026-01-23 15:23:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-23 15:23:16] 2.9.2.0 3582414 4106 102344 155437 1 49 35412290 36864000 0 130560 0 2006820 99.989 105542 8419 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-01-23 15:23:16] CVMFS is ok
[2026-01-23 15:23:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-23 15:23:16] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-23 15:23:16] Further information can be found at the LHC@home message board.
[2026-01-23 15:23:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-23 15:23:16] Checking for apptainer binary...
[2026-01-23 15:23:16] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-23 15:23:16] Running /usr/bin/apptainer --version
[2026-01-23 15:23:16] apptainer version 1.4.1-1.1
[2026-01-23 15:23:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-23 15:23:16] cosA131b
[2026-01-23 15:23:16] apptainer works
[2026-01-23 15:23:16] Set ATHENA_PROC_NUMBER=4
[2026-01-23 15:23:16] Set ATHENA_CORE_NUMBER=4
[2026-01-23 15:23:16] Starting ATLAS job with PandaID=6978169520
[2026-01-23 15:23:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-23 16:27:39]  *** The last 200 lines of the pilot log: ***
[2026-01-23 16:27:39]  ddmendpoint_alt=None
[2026-01-23 16:27:39]  direct_access_lan=False
[2026-01-23 16:27:39]  direct_access_wan=False
[2026-01-23 16:27:39]  domain=
[2026-01-23 16:27:39]  filesize=274777
[2026-01-23 16:27:39]  filetype=log
[2026-01-23 16:27:39]  guid=a3590e0d-6ffe-4685-8040-0efb9b358bd6
[2026-01-23 16:27:39]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-01-23 16:27:39]  is_altstaged=None
[2026-01-23 16:27:39]  is_tar=False
[2026-01-23 16:27:39]  lfn=log.48310670._004680.job.log.tgz.1
[2026-01-23 16:27:39]  mtime=0
[2026-01-23 16:27:39]  protocol_id=None
[2026-01-23 16:27:39]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-23 16:27:39]  replicas=None
[2026-01-23 16:27:39]  scope=mc23_13p6TeV
[2026-01-23 16:27:39]  status=None
[2026-01-23 16:27:39]  status_code=0
[2026-01-23 16:27:39]  storage_token=
[2026-01-23 16:27:39]  surl=/local/data/boinc/slots/0/PanDA_Pilot-6978169520/log.48310670._004680.job.log.tgz.1
[2026-01-23 16:27:39]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f7/5d/log.48310670._004680.job.log.tgz.1
[2026-01-23 16:27:39]  workdir=None
[2026-01-23 16:27:39] ]
[2026-01-23 16:27:39] 2026-01-23 15:26:47,802 | INFO     | transferring file log.48310670._004680.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6978169520/log.48310670._004680.job.log.tgz.1 to /local/data/boinc/
[2026-01-23 16:27:39] 2026-01-23 15:26:47,802 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6978169520/log.48310670._004680.job.log.tgz.1 /local/data/boinc/slots/0/log.48310670._0046
[2026-01-23 16:27:39] 2026-01-23 15:26:47,820 | INFO     | adding to output.list: log.48310670._004680.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f7/5d/log.48310670._004680.job.log.tg
[2026-01-23 16:27:39] 2026-01-23 15:26:47,821 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-23 16:27:39] 2026-01-23 15:26:47,821 | INFO     | summary of transferred files:
[2026-01-23 16:27:39] 2026-01-23 15:26:47,821 | INFO     |  -- lfn=log.48310670._004680.job.log.tgz.1, status_code=0, status=transferred
[2026-01-23 16:27:39] 2026-01-23 15:26:47,821 | INFO     | stage-out finished correctly
[2026-01-23 16:27:39] 2026-01-23 15:26:47,859 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-23 16:27:39] 2026-01-23 15:26:48,809 | INFO     | job 6978169520 has state=finished
[2026-01-23 16:27:39] 2026-01-23 15:26:48,809 | INFO     | preparing for final server update for job 6978169520 in state='finished'
[2026-01-23 16:27:39] 2026-01-23 15:26:48,809 | INFO     | reading metadata from: /local/data/boinc/slots/0/PanDA_Pilot-6978169520/jobReport.json
[2026-01-23 16:27:39] 2026-01-23 15:26:48,811 | INFO     | added worker_node to metadata from /local/data/boinc/slots/0/workernode_map.json
[2026-01-23 16:27:39] 2026-01-23 15:26:48,811 | INFO     | this job has now completed (state=finished)
[2026-01-23 16:27:39] 2026-01-23 15:26:48,811 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-23 16:27:39] 2026-01-23 15:26:48,811 | INFO     | log transfer has been attempted: DONE
[2026-01-23 16:27:39] 2026-01-23 15:26:48,811 | INFO     | job 6978169520 has finished - writing final server update
[2026-01-23 16:27:39] 2026-01-23 15:26:48,811 | INFO     | total number of processed events: 400 (read)
[2026-01-23 16:27:39] 2026-01-23 15:26:48,813 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6978169520/memory_monitor_summary.json (trf name=prmon)
[2026-01-23 16:27:39] 2026-01-23 15:26:48,813 | INFO     | extracted standard info from prmon json
[2026-01-23 16:27:39] 2026-01-23 15:26:48,813 | INFO     | extracted standard memory fields from prmon json
[2026-01-23 16:27:39] 2026-01-23 15:26:48,813 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-23 16:27:39] 2026-01-23 15:26:48,814 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-23 16:27:39] 2026-01-23 15:26:48,814 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-23 16:27:39] 2026-01-23 15:26:48,814 | INFO     | fitting pss+swap vs Time
[2026-01-23 16:27:39] 2026-01-23 15:26:48,815 | INFO     | sum of square deviations: 51573060.0
[2026-01-23 16:27:39] 2026-01-23 15:26:48,815 | INFO     | sum of deviations: -6449222926.0
[2026-01-23 16:27:39] 2026-01-23 15:26:48,815 | INFO     | mean x: 1769180180.0
[2026-01-23 16:27:39] 2026-01-23 15:26:48,815 | INFO     | mean y: 2578366.0
[2026-01-23 16:27:39] 2026-01-23 15:26:48,815 | INFO     | intersect: 221238963740.085
[2026-01-23 16:27:39] 2026-01-23 15:26:48,815 | INFO     | chi2: 0.03183966650205889
[2026-01-23 16:27:39] 2026-01-23 15:26:48,815 | INFO     | current memory leak: -125.05 B/s (using 55 data points, chi2=0.03)
[2026-01-23 16:27:39] 2026-01-23 15:26:48,815 | INFO     | could have reported an average CPU frequency of 3483 MHz (6 samples)
[2026-01-23 16:27:39] 2026-01-23 15:26:48,815 | INFO     | ..............................
[2026-01-23 16:27:39] 2026-01-23 15:26:48,815 | INFO     | . Timing measurements:
[2026-01-23 16:27:39] 2026-01-23 15:26:48,815 | INFO     | . get job = 0 s
[2026-01-23 16:27:39] 2026-01-23 15:26:48,815 | INFO     | . initial setup = 4 s
[2026-01-23 16:27:39] 2026-01-23 15:26:48,815 | INFO     | . payload setup = 4 s
[2026-01-23 16:27:39] 2026-01-23 15:26:48,815 | INFO     | . stage-in = 0 s
[2026-01-23 16:27:39] 2026-01-23 15:26:48,815 | INFO     | . payload execution = 3779 s
[2026-01-23 16:27:39] 2026-01-23 15:26:48,815 | INFO     | . stage-out = 0 s
[2026-01-23 16:27:39] 2026-01-23 15:26:48,815 | INFO     | . log creation = 0 s
[2026-01-23 16:27:39] 2026-01-23 15:26:48,815 | INFO     | ..............................
[2026-01-23 16:27:39] 2026-01-23 15:26:48,855 | INFO     | 
[2026-01-23 16:27:39] 2026-01-23 15:26:48,855 | INFO     | job summary report
[2026-01-23 16:27:39] 2026-01-23 15:26:48,855 | INFO     | --------------------------------------------------
[2026-01-23 16:27:39] 2026-01-23 15:26:48,855 | INFO     | PanDA job id: 6978169520
[2026-01-23 16:27:39] 2026-01-23 15:26:48,855 | INFO     | task id: 48310670
[2026-01-23 16:27:39] 2026-01-23 15:26:48,855 | INFO     | errors: (none)
[2026-01-23 16:27:39] 2026-01-23 15:26:48,855 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-23 16:27:39] 2026-01-23 15:26:48,855 | INFO     | pilot state: finished 
[2026-01-23 16:27:39] 2026-01-23 15:26:48,855 | INFO     | transexitcode: 0
[2026-01-23 16:27:39] 2026-01-23 15:26:48,855 | INFO     | exeerrorcode: 0
[2026-01-23 16:27:39] 2026-01-23 15:26:48,855 | INFO     | exeerrordiag: 
[2026-01-23 16:27:39] 2026-01-23 15:26:48,855 | INFO     | exitcode: 0
[2026-01-23 16:27:39] 2026-01-23 15:26:48,855 | INFO     | exitmsg: OK
[2026-01-23 16:27:39] 2026-01-23 15:26:48,856 | INFO     | cpuconsumptiontime: 14235 s
[2026-01-23 16:27:39] 2026-01-23 15:26:48,856 | INFO     | nevents: 400
[2026-01-23 16:27:39] 2026-01-23 15:26:48,856 | INFO     | neventsw: 0
[2026-01-23 16:27:39] 2026-01-23 15:26:48,856 | INFO     | pid: 111408
[2026-01-23 16:27:39] 2026-01-23 15:26:48,856 | INFO     | pgrp: 111408
[2026-01-23 16:27:39] 2026-01-23 15:26:48,856 | INFO     | corecount: 4
[2026-01-23 16:27:39] 2026-01-23 15:26:48,856 | INFO     | event service: False
[2026-01-23 16:27:39] 2026-01-23 15:26:48,856 | INFO     | sizes: {0: 2284040, 1: 2284246, 11: 2284274, 3787: 2310220, 3788: 2319280, 3789: 2319418}
[2026-01-23 16:27:39] 2026-01-23 15:26:48,856 | INFO     | --------------------------------------------------
[2026-01-23 16:27:39] 2026-01-23 15:26:48,856 | INFO     | 
[2026-01-23 16:27:39] 2026-01-23 15:26:48,856 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2026-01-23 16:27:39] 2026-01-23 15:26:48,873 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-23 16:27:39] 2026-01-23 15:26:48,873 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-23 16:27:39] 2026-01-23 15:26:48,873 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-23 16:27:39] 2026-01-23 15:26:48,873 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-23 16:27:39] 2026-01-23 15:26:48,873 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-23 16:27:39] 2026-01-23 15:26:48,873 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-23 16:27:39] 2026-01-23 15:26:48,873 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-23 16:27:39] 2026-01-23 15:26:48,874 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-23 16:27:39] 2026-01-23 15:26:48,874 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-23 16:27:39] 2026-01-23 15:26:48,874 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-23 16:27:39] 2026-01-23 15:26:48,874 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-23 16:27:39] 2026-01-23 15:26:48,874 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-23 16:27:39] 2026-01-23 15:26:48,874 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-23 16:27:39] 2026-01-23 15:26:48,874 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-23 16:27:39] 2026-01-23 15:26:48,874 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-23 16:27:39] 2026-01-23 15:26:48,874 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-23 16:27:39] 2026-01-23 15:26:48,874 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-23 16:27:39] 2026-01-23 15:26:48,874 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-23 16:27:39] 2026-01-23 15:26:48,874 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-23 16:27:39] 2026-01-23 15:26:48,874 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-23 16:27:39] 2026-01-23 15:26:48,874 | INFO     | job 6978169520 has completed (purged errors)
[2026-01-23 16:27:39] 2026-01-23 15:26:48,874 | INFO     | overall cleanup function is called
[2026-01-23 16:27:39] 2026-01-23 15:26:49,881 | INFO     | --- collectZombieJob: --- 10, [111408]
[2026-01-23 16:27:39] 2026-01-23 15:26:49,881 | INFO     | zombie collector waiting for pid 111408
[2026-01-23 16:27:39] 2026-01-23 15:26:49,881 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-23 16:27:39] 2026-01-23 15:26:49,881 | INFO     | collected zombie processes
[2026-01-23 16:27:39] 2026-01-23 15:26:49,882 | INFO     | will attempt to kill all subprocesses of pid=111408
[2026-01-23 16:27:39] 2026-01-23 15:26:49,925 | INFO     | process IDs to be killed: [111408] (in reverse order)
[2026-01-23 16:27:39] 2026-01-23 15:26:49,957 | WARNING  | found no corresponding commands to process id(s)
[2026-01-23 16:27:39] 2026-01-23 15:26:49,957 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-23 16:27:39] 2026-01-23 15:26:49,959 | INFO     | did not find any defunct processes belonging to 111408
[2026-01-23 16:27:39] 2026-01-23 15:26:49,960 | INFO     | did not find any defunct processes belonging to 111408
[2026-01-23 16:27:39] 2026-01-23 15:26:49,960 | INFO     | ready for new job
[2026-01-23 16:27:39] 2026-01-23 15:26:49,960 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-23 16:27:39] 2026-01-23 15:26:49,961 | INFO     | **************************************
[2026-01-23 16:27:39] 2026-01-23 15:26:49,961 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-23 16:27:39] 2026-01-23 15:26:49,961 | INFO     | **************************************
[2026-01-23 16:27:39] 2026-01-23 15:26:49,961 | INFO     | 
[2026-01-23 16:27:39] 2026-01-23 15:26:49,961 | INFO     | architecture information:
[2026-01-23 16:27:39] 2026-01-23 15:26:49,962 | INFO     | executing command: cat /etc/os-release
[2026-01-23 16:27:39] 2026-01-23 15:26:49,976 | INFO     | cat /etc/os-release:
[2026-01-23 16:27:39] NAME="CentOS Linux"
[2026-01-23 16:27:39] VERSION="7 (Core)"
[2026-01-23 16:27:39] ID="centos"
[2026-01-23 16:27:39] ID_LIKE="rhel fedora"
[2026-01-23 16:27:39] VERSION_ID="7"
[2026-01-23 16:27:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-23 16:27:39] ANSI_COLOR="0;31"
[2026-01-23 16:27:39] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-23 16:27:39] HOME_URL="https://www.centos.org/"
[2026-01-23 16:27:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-23 16:27:39] 
[2026-01-23 16:27:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-23 16:27:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-23 16:27:39] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-23 16:27:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-23 16:27:39] 
[2026-01-23 16:27:39] 2026-01-23 15:26:49,976 | INFO     | **************************************
[2026-01-23 16:27:39] 2026-01-23 15:26:50,479 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-01-23 16:27:39] 2026-01-23 15:26:50,497 | INFO     | sufficient remaining disk space (319306072064 B)
[2026-01-23 16:27:39] 2026-01-23 15:26:50,497 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-23 16:27:39] 2026-01-23 15:26:50,497 | INFO     | current server update state: UPDATING_FINAL
[2026-01-23 16:27:39] 2026-01-23 15:26:50,497 | INFO     | update_server=False
[2026-01-23 16:27:39] 2026-01-23 15:26:50,497 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-23 16:27:39] 2026-01-23 15:26:50,498 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-23 16:27:39] 2026-01-23 15:26:50,498 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-23 16:27:39] 2026-01-23 15:26:50,498 | INFO     | aborting loop
[2026-01-23 16:27:39] 2026-01-23 15:26:50,591 | INFO     | all payload control threads have been joined
[2026-01-23 16:27:39] 2026-01-23 15:26:50,866 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-23 16:27:39] 2026-01-23 15:26:51,261 | INFO     | all job control threads have been joined
[2026-01-23 16:27:39] 2026-01-23 15:26:51,443 | INFO     | all data control threads have been joined
[2026-01-23 16:27:39] 2026-01-23 15:26:51,503 | INFO     | [job] retrieve thread has finished
[2026-01-23 16:27:39] 2026-01-23 15:26:51,503 | INFO     | [job] queue monitor thread has finished
[2026-01-23 16:27:39] 2026-01-23 15:26:51,504 | INFO     | [job] job monitor thread has finished
[2026-01-23 16:27:39] 2026-01-23 15:26:51,597 | INFO     | [payload] control thread has finished
[2026-01-23 16:27:39] 2026-01-23 15:26:51,680 | INFO     | [payload] validate_post thread has finished
[2026-01-23 16:27:39] 2026-01-23 15:26:52,266 | INFO     | [job] control thread has finished
[2026-01-23 16:27:39] 2026-01-23 15:26:52,304 | INFO     | [job] validate thread has finished
[2026-01-23 16:27:39] 2026-01-23 15:26:52,427 | INFO     | [job] create_data_payload thread has finished
[2026-01-23 16:27:39] 2026-01-23 15:26:52,444 | INFO     | [payload] execute_payloads thread has finished
[2026-01-23 16:27:39] 2026-01-23 15:26:52,448 | INFO     | [data] control thread has finished
[2026-01-23 16:27:39] 2026-01-23 15:26:52,495 | INFO     | [payload] validate_pre thread has finished
[2026-01-23 16:27:39] 2026-01-23 15:26:52,640 | INFO     | [data] copytool_in thread has finished
[2026-01-23 16:27:39] 2026-01-23 15:26:52,747 | INFO     | [payload] failed_post thread has finished
[2026-01-23 16:27:39] 2026-01-23 15:26:52,872 | INFO     | [data] copytool_out thread has finished
[2026-01-23 16:27:39] 2026-01-23 15:26:53,904 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-23 16:27:39] 2026-01-23 15:26:57,910 | INFO     | [data] queue_monitor thread has finished
[2026-01-23 16:27:39] 2026-01-23 15:27:01,372 | INFO     | job.realtimelogging is not enabled
[2026-01-23 16:27:39] 2026-01-23 15:27:02,378 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-23 16:27:39] 2026-01-23 15:27:20,881 | INFO     | PID=106904 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-23 16:27:39] 2026-01-23 15:27:20,881 | INFO     | found 0 job(s) in 20 queues
[2026-01-23 16:27:39] 2026-01-23 15:27:20,881 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-23 16:27:39] 2026-01-23 15:27:20,882 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-23 16:27:39] 2026-01-23 15:27:33,858 | INFO     | [monitor] cgroup control has ended
[2026-01-23 16:27:39] 2026-01-23 15:27:33,914 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140520719771456)>', '<ExcThread(monitor, started 140519762020096)>']
[2026-01-23 16:27:39] 2026-01-23 15:27:33,949 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-23 16:27:39] 2026-01-23 15:27:33,949 | INFO     | [monitor] control thread has ended
[2026-01-23 16:27:39] 2026-01-23 15:27:38,940 | INFO     | all workflow threads have been joined
[2026-01-23 16:27:39] 2026-01-23 15:27:38,940 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-23 16:27:39] 2026-01-23 15:27:38,941 | INFO     | traces error code: 0
[2026-01-23 16:27:39] 2026-01-23 15:27:38,941 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-23 16:27:39] 2026-01-23 15:27:39,022 [wrapper] ==== pilot stdout END ====
[2026-01-23 16:27:39] 2026-01-23 15:27:39,026 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-23 16:27:39] 2026-01-23 15:27:39,030 [wrapper] pilotpid: 106904
[2026-01-23 16:27:39] 2026-01-23 15:27:39,034 [wrapper] Pilot exit status: 0
[2026-01-23 16:27:39] 2026-01-23 15:27:39,046 [wrapper] pandaids: 6978169520
[2026-01-23 16:27:39] 2026-01-23 15:27:39,068 [wrapper] cleanup supervisor_pilot  116673 106905
[2026-01-23 16:27:39] 2026-01-23 15:27:39,072 [wrapper] Test setup, not cleaning
[2026-01-23 16:27:39] 2026-01-23 15:27:39,076 [wrapper] apfmon messages muted
[2026-01-23 16:27:39] 2026-01-23 15:27:39,080 [wrapper] ==== wrapper stdout END ====
[2026-01-23 16:27:39] 2026-01-23 15:27:39,084 [wrapper] ==== wrapper stderr END ====
[2026-01-23 16:27:39]  *** Error codes and diagnostics ***
[2026-01-23 16:27:39]     "exeErrorCode": 0,
[2026-01-23 16:27:39]     "exeErrorDiag": "",
[2026-01-23 16:27:39]     "pilotErrorCode": 0,
[2026-01-23 16:27:39]     "pilotErrorDiag": "",
[2026-01-23 16:27:39]  *** Listing of results directory ***
[2026-01-23 16:27:39] total 663488
[2026-01-23 16:27:39] -rwx------ 1 boinc boinc     36322 Jan 23 06:19 runpilot2-wrapper.sh
[2026-01-23 16:27:39] -rw-r--r-- 1 boinc boinc      5111 Jan 23 06:20 queuedata.json
[2026-01-23 16:27:39] -rw-r--r-- 1 boinc boinc    584422 Jan 23 06:20 pilot3.tar.gz
[2026-01-23 16:27:39] -rw-r--r-- 1 boinc boinc       100 Jan 23 15:23 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-23 16:27:39] -rwxr-xr-x 1 boinc boinc      7986 Jan 23 15:23 run_atlas
[2026-01-23 16:27:39] -rw-r--r-- 1 boinc boinc       105 Jan 23 15:23 job.xml
[2026-01-23 16:27:39] -rw-r--r-- 2 boinc boinc 503276695 Jan 23 15:23 EVNT.48310665._000094.pool.root.1
[2026-01-23 16:27:39] -rw-r--r-- 2 boinc boinc    597754 Jan 23 15:23 input.tar.gz
[2026-01-23 16:27:39] -rw-r--r-- 2 boinc boinc     15845 Jan 23 15:23 start_atlas.sh
[2026-01-23 16:27:39] drwxrwx--x 2 boinc boinc      4096 Jan 23 15:23 shared
[2026-01-23 16:27:39] -rw-r--r-- 1 boinc boinc         0 Jan 23 15:23 boinc_setup_complete
[2026-01-23 16:27:39] -rw-r--r-- 1 boinc boinc      6378 Jan 23 15:23 init_data.xml
[2026-01-23 16:27:39] -rw-r--r-- 1 boinc boinc         0 Jan 23 15:23 boinc_lockfile
[2026-01-23 16:27:39] -rw-r--r-- 1 boinc boinc      2524 Jan 23 15:23 pandaJob.out
[2026-01-23 16:27:39] -rw------- 1 boinc boinc   1004230 Jan 23 15:23 agis_schedconf.cvmfs.json
[2026-01-23 16:27:39] -rw------- 1 boinc boinc   1516246 Jan 23 15:23 agis_ddmendpoints.agis.ALL.json
[2026-01-23 16:27:39] -rw------- 1 boinc boinc       423 Jan 23 15:23 workernode_map.json
[2026-01-23 16:27:39] drwx------ 5 boinc boinc      4096 Jan 23 15:23 pilot3
[2026-01-23 16:27:39] -rw------- 1 boinc boinc 170500625 Jan 23 16:26 HITS.48310670._004680.pool.root.1
[2026-01-23 16:27:39] -rw-r--r-- 1 boinc boinc       530 Jan 23 16:26 boinc_task_state.xml
[2026-01-23 16:27:39] -rw------- 1 boinc boinc      1035 Jan 23 16:26 memory_monitor_summary.json
[2026-01-23 16:27:39] -rw------- 1 boinc boinc        95 Jan 23 16:26 pilot_heartbeat.json
[2026-01-23 16:27:39] -rw------- 1 boinc boinc    274777 Jan 23 16:26 log.48310670._004680.job.log.tgz.1
[2026-01-23 16:27:39] -rw------- 1 boinc boinc      6315 Jan 23 16:26 heartbeat.json
[2026-01-23 16:27:39] -rw-r--r-- 1 boinc boinc      8192 Jan 23 16:27 boinc_mmap_file
[2026-01-23 16:27:39] -rw-r--r-- 1 boinc boinc        27 Jan 23 16:27 wrapper_checkpoint.txt
[2026-01-23 16:27:39] -rw------- 1 boinc boinc      4819 Jan 23 16:27 pilotlog.txt
[2026-01-23 16:27:39] -rw------- 1 boinc boinc    569376 Jan 23 16:27 log.48310670._004680.job.log.1
[2026-01-23 16:27:39] -rw------- 1 boinc boinc       357 Jan 23 16:27 output.list
[2026-01-23 16:27:39] -rw-r--r-- 1 boinc boinc       620 Jan 23 16:27 runtime_log
[2026-01-23 16:27:39] -rw------- 1 boinc boinc    860160 Jan 23 16:27 result.tar.gz
[2026-01-23 16:27:39] -rw-r--r-- 1 boinc boinc      8906 Jan 23 16:27 runtime_log.err
[2026-01-23 16:27:39] -rw------- 1 boinc boinc       659 Jan 23 16:27 VJQLDmtkO38nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmUz1KDmrmRB4n.diag
[2026-01-23 16:27:39] -rw-r--r-- 1 boinc boinc     20847 Jan 23 16:27 stderr.txt
[2026-01-23 16:27:39] HITS file was successfully produced:
[2026-01-23 16:27:39] -rw------- 1 boinc boinc 170500625 Jan 23 16:26 shared/HITS.pool.root.1
[2026-01-23 16:27:39]  *** Contents of shared directory: ***
[2026-01-23 16:27:39] total 659440
[2026-01-23 16:27:39] -rw-r--r-- 2 boinc boinc 503276695 Jan 23 15:23 ATLAS.root_0
[2026-01-23 16:27:39] -rw-r--r-- 2 boinc boinc    597754 Jan 23 15:23 input.tar.gz
[2026-01-23 16:27:39] -rw-r--r-- 2 boinc boinc     15845 Jan 23 15:23 start_atlas.sh
[2026-01-23 16:27:39] -rw------- 1 boinc boinc 170500625 Jan 23 16:26 HITS.pool.root.1
[2026-01-23 16:27:39] -rw------- 1 boinc boinc    860160 Jan 23 16:27 result.tar.gz
16:27:40 (102785): run_atlas exited; CPU time 14251.792216
16:27:40 (102785): called boinc_finish(0)

</stderr_txt>
]]>

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