Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
08:50:05 (286187): wrapper (7.7.26015): starting
08:50:05 (286187): wrapper: running run_atlas (--nthreads 8)
[2026-01-23 08:50:05] Arguments: --nthreads 8
[2026-01-23 08:50:05] Threads: 8
[2026-01-23 08:50:05] Checking for CVMFS
[2026-01-23 08:50:07] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-23 08:50:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-23 08:50:12] Running cvmfs_config stat atlas.cern.ch
[2026-01-23 08:50:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-23 08:50:12] 2.13.3.0 286398 0 25476 155428 3 1 1873838 4194304 0 130560 0 0 100.000 0 0 http://sampacs01.if.usp.br:8000/cvmfs/atlas.cern.ch DIRECT 1
[2026-01-23 08:50:12] CVMFS is ok
[2026-01-23 08:50:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-23 08:50:12] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-23 08:50:12] Small home clusters do not require a local http proxy but it is suggested if
[2026-01-23 08:50:12] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-01-23 08:50:12] Further information can be found at the LHC@home message board.
[2026-01-23 08:50:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-23 08:50:12] Checking for apptainer binary...
[2026-01-23 08:50:12] apptainer is not installed, using version from CVMFS
[2026-01-23 08:50:12] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-23 08:50:12] apptainer isnt working: ERROR  : Could not write info to setgroups: Permission denied
[2026-01-23 08:50:12] ERROR  : Error while waiting event for user namespace mappings: no event received
[2026-01-23 08:50:12] 
[2026-01-23 08:50:12] Falling back to singularity found in PATH at /usr/bin/singularity
[2026-01-23 08:50:12] WARNING: singularity support will be removed in a future version of native ATLAS
[2026-01-23 08:50:12] Please install apptainer instead following the instructions at https://apptainer.org/docs/admin/main/installation.html
[2026-01-23 08:50:12] Checking singularity works with /usr/bin/singularity exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-23 08:50:13] singularity works
[2026-01-23 08:50:13] Set ATHENA_PROC_NUMBER=8
[2026-01-23 08:50:13] Set ATHENA_CORE_NUMBER=8
[2026-01-23 08:50:13] Starting ATLAS job with PandaID=6978166998
[2026-01-23 08:50:13] Running command: /usr/bin/singularity exec -B /cvmfs,/var/lib/boinc-client/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-23 10:37:19]  *** The last 200 lines of the pilot log: ***
[2026-01-23 10:37:19] 2026-01-23 13:36:47,157 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-23 10:37:19] 2026-01-23 13:36:47,158 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-23 10:37:19] 2026-01-23 13:36:47,158 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-23 10:37:19] 2026-01-23 13:36:47,158 | INFO     | fitting pss+swap vs Time
[2026-01-23 10:37:19] 2026-01-23 13:36:47,158 | INFO     | sum of square deviations: 358927660.0
[2026-01-23 10:37:19] 2026-01-23 13:36:47,159 | INFO     | sum of deviations: -5655483179.0
[2026-01-23 10:37:19] 2026-01-23 13:36:47,159 | INFO     | mean x: 1769172227.0
[2026-01-23 10:37:19] 2026-01-23 13:36:47,159 | INFO     | mean y: 2747313.7333333334
[2026-01-23 10:37:19] 2026-01-23 13:36:47,159 | INFO     | intersect: 27878904226.668015
[2026-01-23 10:37:19] 2026-01-23 13:36:47,159 | INFO     | chi2: 3.0776351054273587
[2026-01-23 10:37:19] 2026-01-23 13:36:47,159 | INFO     | sum of square deviations: 310052325.0
[2026-01-23 10:37:19] 2026-01-23 13:36:47,159 | INFO     | sum of deviations: 4723723215.500004
[2026-01-23 10:37:19] 2026-01-23 13:36:47,159 | INFO     | mean x: 1769172074.5
[2026-01-23 10:37:19] 2026-01-23 13:36:47,159 | INFO     | mean y: 2778920.09
[2026-01-23 10:37:19] 2026-01-23 13:36:47,159 | INFO     | intersect: -26950991546.007786
[2026-01-23 10:37:19] 2026-01-23 13:36:47,159 | INFO     | chi2: 2.373360532004223
[2026-01-23 10:37:19] 2026-01-23 13:36:47,159 | INFO     | current chi2=2.373360532004223 (change=22.88362815270593 %)
[2026-01-23 10:37:19] 2026-01-23 13:36:47,159 | INFO     | right removable region: 99
[2026-01-23 10:37:19] 2026-01-23 13:36:47,159 | INFO     | sum of square deviations: 310052325.0
[2026-01-23 10:37:19] 2026-01-23 13:36:47,159 | INFO     | sum of deviations: -29819821818.000008
[2026-01-23 10:37:19] 2026-01-23 13:36:47,159 | INFO     | mean x: 1769172379.5
[2026-01-23 10:37:19] 2026-01-23 13:36:47,159 | INFO     | mean y: 2821825.66
[2026-01-23 10:37:19] 2026-01-23 13:36:47,160 | INFO     | intersect: 170156053613.2852
[2026-01-23 10:37:19] 2026-01-23 13:36:47,160 | INFO     | chi2: 0.9213863784378923
[2026-01-23 10:37:19] 2026-01-23 13:36:47,160 | INFO     | current chi2=0.9213863784378923 (change=70.06187066124107 %)
[2026-01-23 10:37:19] 2026-01-23 13:36:47,160 | INFO     | sum of square deviations: 265828240.0
[2026-01-23 10:37:19] 2026-01-23 13:36:47,160 | INFO     | sum of deviations: -28587509273.000008
[2026-01-23 10:37:19] 2026-01-23 13:36:47,160 | INFO     | mean x: 1769172532.0
[2026-01-23 10:37:19] 2026-01-23 13:36:47,160 | INFO     | mean y: 2817536.863157895
[2026-01-23 10:37:19] 2026-01-23 13:36:47,160 | INFO     | intersect: 190261896723.05838
[2026-01-23 10:37:19] 2026-01-23 13:36:47,160 | INFO     | chi2: 0.899959764376107
[2026-01-23 10:37:19] 2026-01-23 13:36:47,160 | INFO     | current chi2=0.899959764376107 (change=2.325475453426139 %)
[2026-01-23 10:37:19] 2026-01-23 13:36:47,160 | INFO     | left removable region: 20
[2026-01-23 10:37:19] 2026-01-23 13:36:47,160 | INFO     | sum of square deviations: 152858680.0
[2026-01-23 10:37:19] 2026-01-23 13:36:47,160 | INFO     | sum of deviations: -15130078147.999998
[2026-01-23 10:37:19] 2026-01-23 13:36:47,160 | INFO     | mean x: 1769172654.0
[2026-01-23 10:37:19] 2026-01-23 13:36:47,160 | INFO     | mean y: 2850095.075949367
[2026-01-23 10:37:19] 2026-01-23 13:36:47,160 | INFO     | intersect: 175117017719.21454
[2026-01-23 10:37:19] 2026-01-23 13:36:47,160 | INFO     | chi2: 0.15878059298882088
[2026-01-23 10:37:19] 2026-01-23 13:36:47,160 | INFO     | current memory leak: -98.98 B/s (using 79 data points, chi2=0.16)
[2026-01-23 10:37:19] 2026-01-23 13:36:47,161 | INFO     | could have reported an average CPU frequency of 4275 MHz (7 samples)
[2026-01-23 10:37:19] 2026-01-23 13:36:47,161 | INFO     | ..............................
[2026-01-23 10:37:19] 2026-01-23 13:36:47,161 | INFO     | . Timing measurements:
[2026-01-23 10:37:19] 2026-01-23 13:36:47,161 | INFO     | . get job = 0 s
[2026-01-23 10:37:19] 2026-01-23 13:36:47,161 | INFO     | . initial setup = 10 s
[2026-01-23 10:37:19] 2026-01-23 13:36:47,161 | INFO     | . payload setup = 2 s
[2026-01-23 10:37:19] 2026-01-23 13:36:47,161 | INFO     | . stage-in = 0 s
[2026-01-23 10:37:19] 2026-01-23 13:36:47,161 | INFO     | . payload execution = 6348 s
[2026-01-23 10:37:19] 2026-01-23 13:36:47,161 | INFO     | . stage-out = 0 s
[2026-01-23 10:37:19] 2026-01-23 13:36:47,161 | INFO     | . log creation = 0 s
[2026-01-23 10:37:19] 2026-01-23 13:36:47,161 | INFO     | ..............................
[2026-01-23 10:37:19] 2026-01-23 13:36:47,190 | INFO     | 
[2026-01-23 10:37:19] 2026-01-23 13:36:47,190 | INFO     | job summary report
[2026-01-23 10:37:19] 2026-01-23 13:36:47,190 | INFO     | --------------------------------------------------
[2026-01-23 10:37:19] 2026-01-23 13:36:47,190 | INFO     | PanDA job id: 6978166998
[2026-01-23 10:37:19] 2026-01-23 13:36:47,190 | INFO     | task id: 48310670
[2026-01-23 10:37:19] 2026-01-23 13:36:47,190 | INFO     | errors: (none)
[2026-01-23 10:37:19] 2026-01-23 13:36:47,190 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-23 10:37:19] 2026-01-23 13:36:47,190 | INFO     | pilot state: finished 
[2026-01-23 10:37:19] 2026-01-23 13:36:47,190 | INFO     | transexitcode: 0
[2026-01-23 10:37:19] 2026-01-23 13:36:47,190 | INFO     | exeerrorcode: 0
[2026-01-23 10:37:19] 2026-01-23 13:36:47,190 | INFO     | exeerrordiag: 
[2026-01-23 10:37:19] 2026-01-23 13:36:47,190 | INFO     | exitcode: 0
[2026-01-23 10:37:19] 2026-01-23 13:36:47,190 | INFO     | exitmsg: OK
[2026-01-23 10:37:19] 2026-01-23 13:36:47,190 | INFO     | cpuconsumptiontime: 46456 s
[2026-01-23 10:37:19] 2026-01-23 13:36:47,190 | INFO     | nevents: 400
[2026-01-23 10:37:19] 2026-01-23 13:36:47,190 | INFO     | neventsw: 0
[2026-01-23 10:37:19] 2026-01-23 13:36:47,190 | INFO     | pid: 294894
[2026-01-23 10:37:19] 2026-01-23 13:36:47,190 | INFO     | pgrp: 294894
[2026-01-23 10:37:19] 2026-01-23 13:36:47,190 | INFO     | corecount: 8
[2026-01-23 10:37:19] 2026-01-23 13:36:47,190 | INFO     | event service: False
[2026-01-23 10:37:19] 2026-01-23 13:36:47,190 | INFO     | sizes: {0: 2284248, 10: 2284248, 6355: 2320315, 6357: 2320453}
[2026-01-23 10:37:19] 2026-01-23 13:36:47,190 | INFO     | --------------------------------------------------
[2026-01-23 10:37:19] 2026-01-23 13:36:47,190 | INFO     | 
[2026-01-23 10:37:19] 2026-01-23 13:36:47,190 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/1
[2026-01-23 10:37:19] 2026-01-23 13:36:47,202 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-23 10:37:19] 2026-01-23 13:36:47,202 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-23 10:37:19] 2026-01-23 13:36:47,202 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-23 10:37:19] 2026-01-23 13:36:47,202 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-23 10:37:19] 2026-01-23 13:36:47,202 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-23 10:37:19] 2026-01-23 13:36:47,202 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-23 10:37:19] 2026-01-23 13:36:47,202 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-23 10:37:19] 2026-01-23 13:36:47,202 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-23 10:37:19] 2026-01-23 13:36:47,202 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-23 10:37:19] 2026-01-23 13:36:47,202 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-23 10:37:19] 2026-01-23 13:36:47,202 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-23 10:37:19] 2026-01-23 13:36:47,202 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-23 10:37:19] 2026-01-23 13:36:47,202 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-23 10:37:19] 2026-01-23 13:36:47,202 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-23 10:37:19] 2026-01-23 13:36:47,202 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-23 10:37:19] 2026-01-23 13:36:47,202 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-23 10:37:19] 2026-01-23 13:36:47,202 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-23 10:37:19] 2026-01-23 13:36:47,202 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-23 10:37:19] 2026-01-23 13:36:47,203 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-23 10:37:19] 2026-01-23 13:36:47,203 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-23 10:37:19] 2026-01-23 13:36:47,203 | INFO     | job 6978166998 has completed (purged errors)
[2026-01-23 10:37:19] 2026-01-23 13:36:47,203 | INFO     | overall cleanup function is called
[2026-01-23 10:37:19] 2026-01-23 13:36:48,212 | INFO     | --- collectZombieJob: --- 10, [294894]
[2026-01-23 10:37:19] 2026-01-23 13:36:48,212 | INFO     | zombie collector waiting for pid 294894
[2026-01-23 10:37:19] 2026-01-23 13:36:48,212 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-23 10:37:19] 2026-01-23 13:36:48,212 | INFO     | collected zombie processes
[2026-01-23 10:37:19] 2026-01-23 13:36:48,212 | INFO     | will attempt to kill all subprocesses of pid=294894
[2026-01-23 10:37:19] 2026-01-23 13:36:48,254 | INFO     | process IDs to be killed: [294894] (in reverse order)
[2026-01-23 10:37:19] 2026-01-23 13:36:48,276 | WARNING  | found no corresponding commands to process id(s)
[2026-01-23 10:37:19] 2026-01-23 13:36:48,276 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-23 10:37:19] 2026-01-23 13:36:48,277 | INFO     | did not find any defunct processes belonging to 294894
[2026-01-23 10:37:19] 2026-01-23 13:36:48,278 | INFO     | did not find any defunct processes belonging to 294894
[2026-01-23 10:37:19] 2026-01-23 13:36:48,278 | INFO     | ready for new job
[2026-01-23 10:37:19] 2026-01-23 13:36:48,278 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-23 10:37:19] 2026-01-23 13:36:48,279 | INFO     | **************************************
[2026-01-23 10:37:19] 2026-01-23 13:36:48,279 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-23 10:37:19] 2026-01-23 13:36:48,279 | INFO     | **************************************
[2026-01-23 10:37:19] 2026-01-23 13:36:48,279 | INFO     | 
[2026-01-23 10:37:19] 2026-01-23 13:36:48,279 | INFO     | architecture information:
[2026-01-23 10:37:19] 2026-01-23 13:36:48,279 | INFO     | executing command: cat /etc/os-release
[2026-01-23 10:37:19] 2026-01-23 13:36:48,287 | INFO     | cat /etc/os-release:
[2026-01-23 10:37:19] NAME="CentOS Linux"
[2026-01-23 10:37:19] VERSION="7 (Core)"
[2026-01-23 10:37:19] ID="centos"
[2026-01-23 10:37:19] ID_LIKE="rhel fedora"
[2026-01-23 10:37:19] VERSION_ID="7"
[2026-01-23 10:37:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-23 10:37:19] ANSI_COLOR="0;31"
[2026-01-23 10:37:19] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-23 10:37:19] HOME_URL="https://www.centos.org/"
[2026-01-23 10:37:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-23 10:37:19] 
[2026-01-23 10:37:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-23 10:37:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-23 10:37:19] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-23 10:37:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-23 10:37:19] 
[2026-01-23 10:37:19] 2026-01-23 13:36:48,287 | INFO     | **************************************
[2026-01-23 10:37:19] 2026-01-23 13:36:48,790 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/1
[2026-01-23 10:37:19] 2026-01-23 13:36:48,798 | INFO     | sufficient remaining disk space (827331706880 B)
[2026-01-23 10:37:19] 2026-01-23 13:36:48,798 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-23 10:37:19] 2026-01-23 13:36:48,798 | INFO     | current server update state: UPDATING_FINAL
[2026-01-23 10:37:19] 2026-01-23 13:36:48,798 | INFO     | update_server=False
[2026-01-23 10:37:19] 2026-01-23 13:36:48,798 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-23 10:37:19] 2026-01-23 13:36:48,798 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-23 10:37:19] 2026-01-23 13:36:48,798 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-23 10:37:19] 2026-01-23 13:36:49,012 | WARNING  | process 294894 can no longer be monitored (due to stat problems) - aborting
[2026-01-23 10:37:19] 2026-01-23 13:36:49,041 | INFO     | using path: /var/lib/boinc-client/slots/1/memory_monitor_summary.json (trf name=prmon)
[2026-01-23 10:37:19] 2026-01-23 13:36:49,042 | INFO     | using path: /var/lib/boinc-client/slots/1/memory_monitor_summary.json (trf name=prmon)
[2026-01-23 10:37:19] 2026-01-23 13:36:49,042 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-01-23 10:37:19] 2026-01-23 13:36:49,042 | WARNING  | maxPSS not found in memory monitor output
[2026-01-23 10:37:19] 2026-01-23 13:36:49,042 | INFO     | skipping file size check of payload stdout file (/var/lib/boinc-client/slots/1/PanDA_Pilot-6978166998/payload.stdout) since it has not been created yet
[2026-01-23 10:37:19] 2026-01-23 13:36:49,042 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/1
[2026-01-23 10:37:19] 2026-01-23 13:36:49,050 | INFO     | sufficient remaining disk space (827331706880 B)
[2026-01-23 10:37:19] 2026-01-23 13:36:49,050 | WARNING  | skipping size check of workdir since it has not been created yet
[2026-01-23 10:37:19] 2026-01-23 13:36:49,050 | INFO     | output file size check: skipping output file /var/lib/boinc-client/slots/1/PanDA_Pilot-6978166998/HITS.48310670._003909.pool.root.1 since it does not exist
[2026-01-23 10:37:19] 2026-01-23 13:36:49,087 | INFO     | number of running child processes to parent process 294894: 1
[2026-01-23 10:37:19] 2026-01-23 13:36:49,087 | INFO     | maximum number of monitored processes: 6
[2026-01-23 10:37:19] 2026-01-23 13:36:49,087 | INFO     | aborting job monitoring since job object (job id=6978166998) has expired
[2026-01-23 10:37:19] 2026-01-23 13:36:49,087 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-23 10:37:19] 2026-01-23 13:36:49,087 | INFO     | will abort loop
[2026-01-23 10:37:19] 2026-01-23 13:36:49,489 | INFO     | all payload control threads have been joined
[2026-01-23 10:37:19] 2026-01-23 13:36:49,518 | INFO     | all data control threads have been joined
[2026-01-23 10:37:19] 2026-01-23 13:36:49,804 | INFO     | [job] retrieve thread has finished
[2026-01-23 10:37:19] 2026-01-23 13:36:49,804 | INFO     | [job] queue monitor thread has finished
[2026-01-23 10:37:19] 2026-01-23 13:36:49,881 | INFO     | [monitor] cgroup control has ended
[2026-01-23 10:37:19] 2026-01-23 13:36:49,993 | INFO     | all job control threads have been joined
[2026-01-23 10:37:19] 2026-01-23 13:36:50,093 | INFO     | [job] job monitor thread has finished
[2026-01-23 10:37:19] 2026-01-23 13:36:50,495 | INFO     | [payload] control thread has finished
[2026-01-23 10:37:19] 2026-01-23 13:36:50,521 | INFO     | [data] control thread has finished
[2026-01-23 10:37:19] 2026-01-23 13:36:50,622 | INFO     | [payload] failed_post thread has finished
[2026-01-23 10:37:19] 2026-01-23 13:36:50,713 | INFO     | [payload] execute_payloads thread has finished
[2026-01-23 10:37:19] 2026-01-23 13:36:50,804 | INFO     | [data] copytool_out thread has finished
[2026-01-23 10:37:19] 2026-01-23 13:36:50,998 | INFO     | [job] control thread has finished
[2026-01-23 10:37:19] 2026-01-23 13:36:51,001 | INFO     | [job] validate thread has finished
[2026-01-23 10:37:19] 2026-01-23 13:36:51,024 | INFO     | [data] copytool_in thread has finished
[2026-01-23 10:37:19] 2026-01-23 13:36:51,027 | INFO     | [payload] validate_pre thread has finished
[2026-01-23 10:37:19] 2026-01-23 13:36:51,027 | INFO     | [job] create_data_payload thread has finished
[2026-01-23 10:37:19] 2026-01-23 13:36:51,049 | INFO     | [payload] validate_post thread has finished
[2026-01-23 10:37:19] 2026-01-23 13:36:51,614 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-23 10:37:19] 2026-01-23 13:36:55,621 | INFO     | [data] queue_monitor thread has finished
[2026-01-23 10:37:19] 2026-01-23 13:36:59,628 | INFO     | job.realtimelogging is not enabled
[2026-01-23 10:37:19] 2026-01-23 13:37:00,634 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-23 10:37:19] 2026-01-23 13:37:02,457 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139943595079488)>', '<ExcThread(monitor, started 139942961334016)>']
[2026-01-23 10:37:19] 2026-01-23 13:37:07,482 | INFO     | all workflow threads have been joined
[2026-01-23 10:37:19] 2026-01-23 13:37:07,483 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-23 10:37:19] 2026-01-23 13:37:07,486 | INFO     | traces error code: 0
[2026-01-23 10:37:19] 2026-01-23 13:37:07,486 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-23 10:37:19] 2026-01-23 13:37:19,493 | INFO     | PID=290486 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-23 10:37:19] 2026-01-23 13:37:19,493 | INFO     | found 0 job(s) in 20 queues
[2026-01-23 10:37:19] 2026-01-23 13:37:19,493 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-23 10:37:19] 2026-01-23 13:37:19,493 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-23 10:37:19] 2026-01-23 13:37:19,493 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-23 10:37:19] 2026-01-23 13:37:19,493 | CRITICAL | thread 'MainThread' is not alive
[2026-01-23 10:37:19] 2026-01-23 13:37:19,493 | INFO     | [monitor] control thread has ended
[2026-01-23 10:37:19] 2026-01-23 13:37:19,537 [wrapper] ==== pilot stdout END ====
[2026-01-23 10:37:19] 2026-01-23 13:37:19,538 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-23 10:37:19] 2026-01-23 13:37:19,539 [wrapper] pilotpid: 290486
[2026-01-23 10:37:19] 2026-01-23 13:37:19,540 [wrapper] Pilot exit status: 0
[2026-01-23 10:37:19] 2026-01-23 13:37:19,544 [wrapper] pandaids: 6978166998
[2026-01-23 10:37:19] 2026-01-23 13:37:19,555 [wrapper] cleanup supervisor_pilot  301528 290487
[2026-01-23 10:37:19] 2026-01-23 13:37:19,556 [wrapper] Test setup, not cleaning
[2026-01-23 10:37:19] 2026-01-23 13:37:19,558 [wrapper] apfmon messages muted
[2026-01-23 10:37:19] 2026-01-23 13:37:19,559 [wrapper] ==== wrapper stdout END ====
[2026-01-23 10:37:19] 2026-01-23 13:37:19,560 [wrapper] ==== wrapper stderr END ====
[2026-01-23 10:37:19]  *** Error codes and diagnostics ***
[2026-01-23 10:37:19]     "exeErrorCode": 0,
[2026-01-23 10:37:19]     "exeErrorDiag": "",
[2026-01-23 10:37:19]     "pilotErrorCode": 0,
[2026-01-23 10:37:19]     "pilotErrorDiag": "",
[2026-01-23 10:37:19]  *** Listing of results directory ***
[2026-01-23 10:37:19] total 666248
[2026-01-23 10:37:19] -rw-r--r-- 1 boinc boinc      5111 Jan 23 02:17 queuedata.json
[2026-01-23 10:37:19] -rw-r--r-- 1 boinc boinc    584422 Jan 23 02:17 pilot3.tar.gz
[2026-01-23 10:37:19] -rwx------ 1 boinc boinc     36322 Jan 23 02:18 runpilot2-wrapper.sh
[2026-01-23 10:37:19] -rw-r--r-- 1 boinc boinc       100 Jan 23 08:50 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-23 10:37:19] -rwxr-xr-x 1 boinc boinc      7986 Jan 23 08:50 run_atlas
[2026-01-23 10:37:19] -rw-r--r-- 1 boinc boinc       105 Jan 23 08:50 job.xml
[2026-01-23 10:37:19] -rw-r--r-- 2 boinc boinc 496718146 Jan 23 08:50 EVNT.48310665._000079.pool.root.1
[2026-01-23 10:37:19] -rw-r--r-- 1 boinc boinc      6747 Jan 23 08:50 init_data.xml
[2026-01-23 10:37:19] drwxrwx--x 2 boinc boinc      4096 Jan 23 08:50 shared
[2026-01-23 10:37:19] -rw-r--r-- 2 boinc boinc    597756 Jan 23 08:50 input.tar.gz
[2026-01-23 10:37:19] -rw-r--r-- 2 boinc boinc     15845 Jan 23 08:50 start_atlas.sh
[2026-01-23 10:37:19] -rw-r--r-- 1 boinc boinc         0 Jan 23 08:50 boinc_lockfile
[2026-01-23 10:37:19] -rw-r--r-- 1 boinc boinc      2523 Jan 23 08:50 pandaJob.out
[2026-01-23 10:37:19] -rw------- 1 boinc boinc   1003905 Jan 23 08:50 agis_schedconf.cvmfs.json
[2026-01-23 10:37:19] -rw------- 1 boinc boinc   1516246 Jan 23 08:50 agis_ddmendpoints.agis.ALL.json
[2026-01-23 10:37:19] -rw------- 1 boinc boinc       417 Jan 23 08:50 workernode_map.json
[2026-01-23 10:37:19] drwx------ 5 boinc boinc      4096 Jan 23 08:50 pilot3
[2026-01-23 10:37:19] -rw------- 1 boinc boinc 179059706 Jan 23 10:36 HITS.48310670._003909.pool.root.1
[2026-01-23 10:37:19] -rw------- 1 boinc boinc      1030 Jan 23 10:36 memory_monitor_summary.json
[2026-01-23 10:37:19] -rw------- 1 boinc boinc    346161 Jan 23 10:36 log.48310670._003909.job.log.tgz.1
[2026-01-23 10:37:19] -rw-r--r-- 1 boinc boinc       530 Jan 23 10:36 boinc_task_state.xml
[2026-01-23 10:37:19] -rw------- 1 boinc boinc      6314 Jan 23 10:36 heartbeat.json
[2026-01-23 10:37:19] -rw-r--r-- 1 boinc boinc      8192 Jan 23 10:37 boinc_mmap_file
[2026-01-23 10:37:19] -rw-r--r-- 1 boinc boinc        27 Jan 23 10:37 wrapper_checkpoint.txt
[2026-01-23 10:37:19] -rw------- 1 boinc boinc       816 Jan 23 10:37 pilotlog.txt
[2026-01-23 10:37:19] -rw------- 1 boinc boinc        95 Jan 23 10:37 pilot_heartbeat.json
[2026-01-23 10:37:19] -rw------- 1 boinc boinc    912716 Jan 23 10:37 log.48310670._003909.job.log.1
[2026-01-23 10:37:19] -rw------- 1 boinc boinc       357 Jan 23 10:37 output.list
[2026-01-23 10:37:19] -rw-r--r-- 1 boinc boinc       620 Jan 23 10:37 runtime_log
[2026-01-23 10:37:19] -rw------- 1 boinc boinc   1280000 Jan 23 10:37 result.tar.gz
[2026-01-23 10:37:19] -rw-r--r-- 1 boinc boinc      8927 Jan 23 10:37 runtime_log.err
[2026-01-23 10:37:19] -rw------- 1 boinc boinc       659 Jan 23 10:37 il8KDmhjO38nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm8v1KDmWPx3un.diag
[2026-01-23 10:37:19] -rw-r--r-- 1 boinc boinc     22249 Jan 23 10:37 stderr.txt
[2026-01-23 10:37:19] HITS file was successfully produced:
[2026-01-23 10:37:19] -rw------- 1 boinc boinc 179059706 Jan 23 10:36 shared/HITS.pool.root.1
[2026-01-23 10:37:19]  *** Contents of shared directory: ***
[2026-01-23 10:37:19] total 661804
[2026-01-23 10:37:19] -rw-r--r-- 2 boinc boinc 496718146 Jan 23 08:50 ATLAS.root_0
[2026-01-23 10:37:19] -rw-r--r-- 2 boinc boinc    597756 Jan 23 08:50 input.tar.gz
[2026-01-23 10:37:19] -rw-r--r-- 2 boinc boinc     15845 Jan 23 08:50 start_atlas.sh
[2026-01-23 10:37:19] -rw------- 1 boinc boinc 179059706 Jan 23 10:36 HITS.pool.root.1
[2026-01-23 10:37:19] -rw------- 1 boinc boinc   1280000 Jan 23 10:37 result.tar.gz
10:37:20 (286187): run_atlas exited; CPU time 46532.489564
10:37:20 (286187): called boinc_finish(0)

</stderr_txt>
]]>

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