Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
11:56:41 (2993362): wrapper (7.7.26015): starting
11:56:41 (2993362): wrapper: running run_atlas (--nthreads 4)
[2026-01-23 11:56:41] Arguments: --nthreads 4
[2026-01-23 11:56:41] Threads: 4
[2026-01-23 11:56:41] Checking for CVMFS
[2026-01-23 11:56:41] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-23 11:56:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-23 11:56:42] Running cvmfs_config stat atlas.cern.ch
[2026-01-23 11:56:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-23 11:56:42] 2.11.5.0 3607749 4214 134732 155442 0 188 3476442 4096000 6454 130560 0 10889256 99.994 107367 1722 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2026-01-23 11:56:42] CVMFS is ok
[2026-01-23 11:56:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-23 11:56:42] Small home clusters do not require a local http proxy but it is suggested if
[2026-01-23 11:56:42] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-01-23 11:56:42] Further information can be found at the LHC@home message board.
[2026-01-23 11:56:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-23 11:56:42] Checking for apptainer binary...
[2026-01-23 11:56:42] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-23 11:56:42] Running /usr/bin/apptainer --version
[2026-01-23 11:56:42] apptainer version 1.4.5
[2026-01-23 11:56:42] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-23 11:56:42] x32-linux3
[2026-01-23 11:56:42] apptainer works
[2026-01-23 11:56:42] Set ATHENA_PROC_NUMBER=4
[2026-01-23 11:56:42] Set ATHENA_CORE_NUMBER=4
[2026-01-23 11:56:42] Starting ATLAS job with PandaID=6969632318
[2026-01-23 11:56:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-23 13:17:07]  *** The last 200 lines of the pilot log: ***
[2026-01-23 13:17:07]  protocol_id=None
[2026-01-23 13:17:07]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-23 13:17:07]  replicas=None
[2026-01-23 13:17:07]  scope=mc23_13p6TeV
[2026-01-23 13:17:07]  status=None
[2026-01-23 13:17:07]  status_code=0
[2026-01-23 13:17:07]  storage_token=
[2026-01-23 13:17:07]  surl=/var/lib/boinc-client/slots/0/PanDA_Pilot-6969632318/log.48215263._033891.job.log.tgz.1
[2026-01-23 13:17:07]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f3/c3/log.48215263._033891.job.log.tgz.1
[2026-01-23 13:17:07]  workdir=None
[2026-01-23 13:17:07] ]
[2026-01-23 13:17:07] 2026-01-23 18:16:02,772 | INFO     | transferring file log.48215263._033891.job.log.tgz.1 from /var/lib/boinc-client/slots/0/PanDA_Pilot-6969632318/log.48215263._033891.job.log.tgz.1 to /var/lib/boinc
[2026-01-23 13:17:07] 2026-01-23 18:16:02,772 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/0/PanDA_Pilot-6969632318/log.48215263._033891.job.log.tgz.1 /var/lib/boinc-client/slots/0/log.482152
[2026-01-23 13:17:07] 2026-01-23 18:16:02,786 | INFO     | adding to output.list: log.48215263._033891.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/f3/c3/log.48215263._033891.job.log.tg
[2026-01-23 13:17:07] 2026-01-23 18:16:02,787 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-23 13:17:07] 2026-01-23 18:16:02,787 | INFO     | summary of transferred files:
[2026-01-23 13:17:07] 2026-01-23 18:16:02,787 | INFO     |  -- lfn=log.48215263._033891.job.log.tgz.1, status_code=0, status=transferred
[2026-01-23 13:17:07] 2026-01-23 18:16:02,787 | INFO     | stage-out finished correctly
[2026-01-23 13:17:07] 2026-01-23 18:16:03,120 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-23 13:17:07] 2026-01-23 18:16:03,468 | INFO     | job 6969632318 has state=finished
[2026-01-23 13:17:07] 2026-01-23 18:16:03,469 | INFO     | preparing for final server update for job 6969632318 in state='finished'
[2026-01-23 13:17:07] 2026-01-23 18:16:03,469 | INFO     | this job has now completed (state=finished)
[2026-01-23 13:17:07] 2026-01-23 18:16:03,469 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-23 13:17:07] 2026-01-23 18:16:03,469 | INFO     | log transfer has been attempted: DONE
[2026-01-23 13:17:07] 2026-01-23 18:16:03,469 | INFO     | job 6969632318 has finished - writing final server update
[2026-01-23 13:17:07] 2026-01-23 18:16:03,469 | INFO     | total number of processed events: 400 (read)
[2026-01-23 13:17:07] 2026-01-23 18:16:03,470 | INFO     | executing command: lscpu
[2026-01-23 13:17:07] 2026-01-23 18:16:03,514 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-23 13:17:07] 2026-01-23 18:16:04,557 | INFO     | time since job start (4752s) is within the limit (349056.0s)
[2026-01-23 13:17:07] 2026-01-23 18:16:05,764 | INFO     | PID=2997538 has CPU usage=5.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-23 13:17:07] 2026-01-23 18:16:05,764 | INFO     | .. there are 8 such processes running
[2026-01-23 13:17:07] 2026-01-23 18:16:05,833 | WARNING  | process 3004212 can no longer be monitored (due to stat problems) - aborting
[2026-01-23 13:17:07] 2026-01-23 18:16:05,834 | INFO     | using path: /var/lib/boinc-client/slots/0/PanDA_Pilot-6969632318/memory_monitor_summary.json (trf name=prmon)
[2026-01-23 13:17:07] 2026-01-23 18:16:05,918 | INFO     | number of running child processes to parent process 3004212: 1
[2026-01-23 13:17:07] 2026-01-23 18:16:05,918 | INFO     | maximum number of monitored processes: 6
[2026-01-23 13:17:07] 2026-01-23 18:16:06,294 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-23 13:17:07] 2026-01-23 18:16:06,298 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 3655.37271875
[2026-01-23 13:17:07] 2026-01-23 18:16:06,303 | INFO     | using path: /var/lib/boinc-client/slots/0/PanDA_Pilot-6969632318/memory_monitor_summary.json (trf name=prmon)
[2026-01-23 13:17:07] 2026-01-23 18:16:06,304 | INFO     | extracted standard info from prmon json
[2026-01-23 13:17:07] 2026-01-23 18:16:06,304 | INFO     | extracted standard memory fields from prmon json
[2026-01-23 13:17:07] 2026-01-23 18:16:06,304 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-23 13:17:07] 2026-01-23 18:16:06,304 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-23 13:17:07] 2026-01-23 18:16:06,304 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-23 13:17:07] 2026-01-23 18:16:06,305 | INFO     | fitting pss+swap vs Time
[2026-01-23 13:17:07] 2026-01-23 18:16:06,306 | INFO     | sum of square deviations: 110960220.0
[2026-01-23 13:17:07] 2026-01-23 18:16:06,306 | INFO     | sum of deviations: -2204514746.0000005
[2026-01-23 13:17:07] 2026-01-23 18:16:06,306 | INFO     | mean x: 1769189876.0
[2026-01-23 13:17:07] 2026-01-23 18:16:06,306 | INFO     | mean y: 2352767.1267605633
[2026-01-23 13:17:07] 2026-01-23 18:16:06,306 | INFO     | intersect: 35151933131.29612
[2026-01-23 13:17:07] 2026-01-23 18:16:06,306 | INFO     | chi2: 0.028488286558626688
[2026-01-23 13:17:07] 2026-01-23 18:16:06,306 | INFO     | current memory leak: -19.87 B/s (using 71 data points, chi2=0.03)
[2026-01-23 13:17:07] 2026-01-23 18:16:06,306 | INFO     | could have reported an average CPU frequency of 3865 MHz (6 samples)
[2026-01-23 13:17:07] 2026-01-23 18:16:06,306 | INFO     | ..............................
[2026-01-23 13:17:07] 2026-01-23 18:16:06,307 | INFO     | . Timing measurements:
[2026-01-23 13:17:07] 2026-01-23 18:16:06,307 | INFO     | . get job = 0 s
[2026-01-23 13:17:07] 2026-01-23 18:16:06,307 | INFO     | . initial setup = 2 s
[2026-01-23 13:17:07] 2026-01-23 18:16:06,307 | INFO     | . payload setup = 4 s
[2026-01-23 13:17:07] 2026-01-23 18:16:06,307 | INFO     | . stage-in = 0 s
[2026-01-23 13:17:07] 2026-01-23 18:16:06,307 | INFO     | . payload execution = 4728 s
[2026-01-23 13:17:07] 2026-01-23 18:16:06,307 | INFO     | . stage-out = 0 s
[2026-01-23 13:17:07] 2026-01-23 18:16:06,307 | INFO     | . log creation = 0 s
[2026-01-23 13:17:07] 2026-01-23 18:16:06,307 | INFO     | ..............................
[2026-01-23 13:17:07] 2026-01-23 18:16:06,369 | INFO     | 
[2026-01-23 13:17:07] 2026-01-23 18:16:06,370 | INFO     | job summary report
[2026-01-23 13:17:07] 2026-01-23 18:16:06,370 | INFO     | --------------------------------------------------
[2026-01-23 13:17:07] 2026-01-23 18:16:06,370 | INFO     | PanDA job id: 6969632318
[2026-01-23 13:17:07] 2026-01-23 18:16:06,370 | INFO     | task id: 48215263
[2026-01-23 13:17:07] 2026-01-23 18:16:06,370 | INFO     | errors: (none)
[2026-01-23 13:17:07] 2026-01-23 18:16:06,370 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-23 13:17:07] 2026-01-23 18:16:06,370 | INFO     | pilot state: finished 
[2026-01-23 13:17:07] 2026-01-23 18:16:06,370 | INFO     | transexitcode: 0
[2026-01-23 13:17:07] 2026-01-23 18:16:06,370 | INFO     | exeerrorcode: 0
[2026-01-23 13:17:07] 2026-01-23 18:16:06,370 | INFO     | exeerrordiag: 
[2026-01-23 13:17:07] 2026-01-23 18:16:06,370 | INFO     | exitcode: 0
[2026-01-23 13:17:07] 2026-01-23 18:16:06,370 | INFO     | exitmsg: OK
[2026-01-23 13:17:07] 2026-01-23 18:16:06,370 | INFO     | cpuconsumptiontime: 17913 s
[2026-01-23 13:17:07] 2026-01-23 18:16:06,370 | INFO     | nevents: 400
[2026-01-23 13:17:07] 2026-01-23 18:16:06,370 | INFO     | neventsw: 0
[2026-01-23 13:17:07] 2026-01-23 18:16:06,370 | INFO     | pid: 3004212
[2026-01-23 13:17:07] 2026-01-23 18:16:06,370 | INFO     | pgrp: 3004212
[2026-01-23 13:17:07] 2026-01-23 18:16:06,371 | INFO     | corecount: 4
[2026-01-23 13:17:07] 2026-01-23 18:16:06,371 | INFO     | event service: False
[2026-01-23 13:17:07] 2026-01-23 18:16:06,371 | INFO     | sizes: {0: 2283959, 3: 2284221, 11: 2284249, 4735: 2310551, 4736: 2319619, 4739: 2319757}
[2026-01-23 13:17:07] 2026-01-23 18:16:06,371 | INFO     | --------------------------------------------------
[2026-01-23 13:17:07] 2026-01-23 18:16:06,371 | INFO     | 
[2026-01-23 13:17:07] 2026-01-23 18:16:06,371 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/0
[2026-01-23 13:17:07] 2026-01-23 18:16:06,386 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-23 13:17:07] 2026-01-23 18:16:06,386 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-23 13:17:07] 2026-01-23 18:16:06,387 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-23 13:17:07] 2026-01-23 18:16:06,387 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-23 13:17:07] 2026-01-23 18:16:06,387 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-23 13:17:07] 2026-01-23 18:16:06,387 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-23 13:17:07] 2026-01-23 18:16:06,387 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-23 13:17:07] 2026-01-23 18:16:06,387 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-23 13:17:07] 2026-01-23 18:16:06,387 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-23 13:17:07] 2026-01-23 18:16:06,387 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-23 13:17:07] 2026-01-23 18:16:06,387 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-23 13:17:07] 2026-01-23 18:16:06,387 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-23 13:17:07] 2026-01-23 18:16:06,387 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-23 13:17:07] 2026-01-23 18:16:06,387 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-23 13:17:07] 2026-01-23 18:16:06,388 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-23 13:17:07] 2026-01-23 18:16:06,388 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-23 13:17:07] 2026-01-23 18:16:06,388 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-23 13:17:07] 2026-01-23 18:16:06,388 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-23 13:17:07] 2026-01-23 18:16:06,388 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-23 13:17:07] 2026-01-23 18:16:06,388 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-23 13:17:07] 2026-01-23 18:16:06,388 | INFO     | job 6969632318 has completed (purged errors)
[2026-01-23 13:17:07] 2026-01-23 18:16:06,388 | INFO     | overall cleanup function is called
[2026-01-23 13:17:07] 2026-01-23 18:16:07,396 | INFO     | --- collectZombieJob: --- 10, [3004212]
[2026-01-23 13:17:07] 2026-01-23 18:16:07,396 | INFO     | zombie collector waiting for pid 3004212
[2026-01-23 13:17:07] 2026-01-23 18:16:07,396 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-23 13:17:07] 2026-01-23 18:16:07,396 | INFO     | collected zombie processes
[2026-01-23 13:17:07] 2026-01-23 18:16:07,396 | INFO     | will attempt to kill all subprocesses of pid=3004212
[2026-01-23 13:17:07] 2026-01-23 18:16:07,520 | INFO     | process IDs to be killed: [3004212] (in reverse order)
[2026-01-23 13:17:07] 2026-01-23 18:16:07,572 | WARNING  | found no corresponding commands to process id(s)
[2026-01-23 13:17:07] 2026-01-23 18:16:07,573 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-23 13:17:07] 2026-01-23 18:16:07,577 | INFO     | did not find any defunct processes belonging to 3004212
[2026-01-23 13:17:07] 2026-01-23 18:16:07,581 | INFO     | did not find any defunct processes belonging to 3004212
[2026-01-23 13:17:07] 2026-01-23 18:16:07,581 | INFO     | ready for new job
[2026-01-23 13:17:07] 2026-01-23 18:16:07,581 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-23 13:17:07] 2026-01-23 18:16:07,582 | INFO     | ***************************************
[2026-01-23 13:17:07] 2026-01-23 18:16:07,582 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-23 13:17:07] 2026-01-23 18:16:07,582 | INFO     | ***************************************
[2026-01-23 13:17:07] 2026-01-23 18:16:07,582 | INFO     | 
[2026-01-23 13:17:07] 2026-01-23 18:16:07,606 | INFO     | architecture information:
[2026-01-23 13:17:07] 2026-01-23 18:16:07,606 | INFO     | executing command: cat /etc/os-release
[2026-01-23 13:17:07] 2026-01-23 18:16:07,619 | INFO     | cat /etc/os-release:
[2026-01-23 13:17:07] NAME="CentOS Linux"
[2026-01-23 13:17:07] VERSION="7 (Core)"
[2026-01-23 13:17:07] ID="centos"
[2026-01-23 13:17:07] ID_LIKE="rhel fedora"
[2026-01-23 13:17:07] VERSION_ID="7"
[2026-01-23 13:17:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-23 13:17:07] ANSI_COLOR="0;31"
[2026-01-23 13:17:07] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-23 13:17:07] HOME_URL="https://www.centos.org/"
[2026-01-23 13:17:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-23 13:17:07] 
[2026-01-23 13:17:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-23 13:17:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-23 13:17:07] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-23 13:17:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-23 13:17:07] 
[2026-01-23 13:17:07] 2026-01-23 18:16:07,619 | INFO     | ***************************************
[2026-01-23 13:17:07] 2026-01-23 18:16:08,122 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/0
[2026-01-23 13:17:07] 2026-01-23 18:16:08,135 | INFO     | sufficient remaining disk space (380296495104 B)
[2026-01-23 13:17:07] 2026-01-23 18:16:08,135 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-23 13:17:07] 2026-01-23 18:16:08,135 | INFO     | current server update state: UPDATING_FINAL
[2026-01-23 13:17:07] 2026-01-23 18:16:08,135 | INFO     | update_server=False
[2026-01-23 13:17:07] 2026-01-23 18:16:08,136 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-23 13:17:07] 2026-01-23 18:16:08,136 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-23 13:17:07] 2026-01-23 18:16:08,360 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-23 13:17:07] 2026-01-23 18:16:08,423 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-23 13:17:07] 2026-01-23 18:16:08,424 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-23 13:17:07] 2026-01-23 18:16:08,424 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-23 13:17:07] 2026-01-23 18:16:08,424 | INFO     | will abort loop
[2026-01-23 13:17:07] 2026-01-23 18:16:09,124 | INFO     | all data control threads have been joined
[2026-01-23 13:17:07] 2026-01-23 18:16:09,140 | INFO     | [job] retrieve thread has finished
[2026-01-23 13:17:07] 2026-01-23 18:16:09,141 | INFO     | [job] queue monitor thread has finished
[2026-01-23 13:17:07] 2026-01-23 18:16:09,184 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-23 13:17:07] 2026-01-23 18:16:09,268 | INFO     | [payload] execute_payloads thread has finished
[2026-01-23 13:17:07] 2026-01-23 18:16:09,332 | INFO     | all job control threads have been joined
[2026-01-23 13:17:07] 2026-01-23 18:16:09,417 | INFO     | all payload control threads have been joined
[2026-01-23 13:17:07] 2026-01-23 18:16:09,428 | INFO     | [job] job monitor thread has finished
[2026-01-23 13:17:07] 2026-01-23 18:16:09,740 | INFO     | [payload] validate_post thread has finished
[2026-01-23 13:17:07] 2026-01-23 18:16:10,121 | INFO     | [payload] failed_post thread has finished
[2026-01-23 13:17:07] 2026-01-23 18:16:10,128 | INFO     | [data] control thread has finished
[2026-01-23 13:17:07] 2026-01-23 18:16:10,188 | INFO     | [job] create_data_payload thread has finished
[2026-01-23 13:17:07] 2026-01-23 18:16:10,337 | INFO     | [job] control thread has finished
[2026-01-23 13:17:07] 2026-01-23 18:16:10,368 | INFO     | [data] copytool_out thread has finished
[2026-01-23 13:17:07] 2026-01-23 18:16:10,393 | INFO     | [job] validate thread has finished
[2026-01-23 13:17:07] 2026-01-23 18:16:10,422 | INFO     | [payload] control thread has finished
[2026-01-23 13:17:07] 2026-01-23 18:16:10,575 | INFO     | [data] copytool_in thread has finished
[2026-01-23 13:17:07] 2026-01-23 18:16:10,614 | INFO     | [payload] validate_pre thread has finished
[2026-01-23 13:17:07] 2026-01-23 18:16:13,188 | INFO     | [data] queue_monitor thread has finished
[2026-01-23 13:17:07] 2026-01-23 18:16:18,388 | INFO     | job.realtimelogging is not enabled
[2026-01-23 13:17:07] 2026-01-23 18:16:19,394 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-23 13:17:07] 2026-01-23 18:16:37,976 | INFO     | PID=2997538 has CPU usage=2.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-23 13:17:07] 2026-01-23 18:16:37,976 | INFO     | .. there are 8 such processes running
[2026-01-23 13:17:07] 2026-01-23 18:16:37,976 | INFO     | found 0 job(s) in 20 queues
[2026-01-23 13:17:07] 2026-01-23 18:16:37,977 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-23 13:17:07] 2026-01-23 18:16:37,977 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-23 13:17:07] 2026-01-23 18:17:00,076 | INFO     | [monitor] cgroup control has ended
[2026-01-23 13:17:07] 2026-01-23 18:17:02,006 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139953200580416)>', '<ExcThread(monitor, started 139952742442752)>']
[2026-01-23 13:17:07] 2026-01-23 18:17:02,076 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-23 13:17:07] 2026-01-23 18:17:02,076 | INFO     | [monitor] control thread has ended
[2026-01-23 13:17:07] 2026-01-23 18:17:07,031 | INFO     | all workflow threads have been joined
[2026-01-23 13:17:07] 2026-01-23 18:17:07,031 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-23 13:17:07] 2026-01-23 18:17:07,031 | INFO     | traces error code: 0
[2026-01-23 13:17:07] 2026-01-23 18:17:07,031 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-23 13:17:07] 2026-01-23 18:17:07,109 [wrapper] ==== pilot stdout END ====
[2026-01-23 13:17:07] 2026-01-23 18:17:07,111 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-23 13:17:07] 2026-01-23 18:17:07,113 [wrapper] pilotpid: 2997538
[2026-01-23 13:17:07] 2026-01-23 18:17:07,115 [wrapper] Pilot exit status: 0
[2026-01-23 13:17:07] 2026-01-23 18:17:07,122 [wrapper] pandaids: 6969632318
[2026-01-23 13:17:07] 2026-01-23 18:17:07,152 [wrapper] cleanup supervisor_pilot 3096824 2997539
[2026-01-23 13:17:07] 2026-01-23 18:17:07,154 [wrapper] Test setup, not cleaning
[2026-01-23 13:17:07] 2026-01-23 18:17:07,156 [wrapper] apfmon messages muted
[2026-01-23 13:17:07] 2026-01-23 18:17:07,158 [wrapper] ==== wrapper stdout END ====
[2026-01-23 13:17:07] 2026-01-23 18:17:07,160 [wrapper] ==== wrapper stderr END ====
[2026-01-23 13:17:07]  *** Error codes and diagnostics ***
[2026-01-23 13:17:07]     "exeErrorCode": 0,
[2026-01-23 13:17:07]     "exeErrorDiag": "",
[2026-01-23 13:17:07]     "pilotErrorCode": 0,
[2026-01-23 13:17:07]     "pilotErrorDiag": "",
[2026-01-23 13:17:07]  *** Listing of results directory ***
[2026-01-23 13:17:07] total 731924
[2026-01-23 13:17:07] -rw-r--r-- 1 boinc boinc      5112 Jan 14 15:15 queuedata.json
[2026-01-23 13:17:07] -rw-r--r-- 1 boinc boinc    579449 Jan 14 15:15 pilot3.tar.gz
[2026-01-23 13:17:07] -rwx------ 1 boinc boinc     36322 Jan 14 15:16 runpilot2-wrapper.sh
[2026-01-23 13:17:07] -rw-r--r-- 1 boinc boinc       100 Jan 23 11:56 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-23 13:17:07] -rwxr-xr-x 1 boinc boinc      7986 Jan 23 11:56 run_atlas
[2026-01-23 13:17:07] -rw-r--r-- 1 boinc boinc       105 Jan 23 11:56 job.xml
[2026-01-23 13:17:07] -rw-r--r-- 2 boinc boinc 592039487 Jan 23 11:56 EVNT.32794306._001355.pool.root.1
[2026-01-23 13:17:07] -rw-r--r-- 2 boinc boinc     15847 Jan 23 11:56 start_atlas.sh
[2026-01-23 13:17:07] drwxrwx--x 2 boinc boinc      4096 Jan 23 11:56 shared
[2026-01-23 13:17:07] -rw-r--r-- 2 boinc boinc    592398 Jan 23 11:56 input.tar.gz
[2026-01-23 13:17:07] -rw-r--r-- 1 boinc boinc      9156 Jan 23 11:56 init_data.xml
[2026-01-23 13:17:07] -rw-r--r-- 1 boinc boinc         0 Jan 23 11:56 boinc_setup_complete
[2026-01-23 13:17:07] -rw-r--r-- 1 boinc boinc         0 Jan 23 11:56 boinc_lockfile
[2026-01-23 13:17:07] -rw-r--r-- 1 boinc boinc      2509 Jan 23 11:56 pandaJob.out
[2026-01-23 13:17:07] -rw------- 1 boinc boinc   1004246 Jan 23 11:56 agis_schedconf.cvmfs.json
[2026-01-23 13:17:07] -rw------- 1 boinc boinc   1516246 Jan 23 11:56 agis_ddmendpoints.agis.ALL.json
[2026-01-23 13:17:07] drwx------ 5 boinc boinc      4096 Jan 23 11:56 pilot3
[2026-01-23 13:17:07] -rw------- 1 boinc boinc 151574188 Jan 23 13:15 HITS.48215263._033891.pool.root.1
[2026-01-23 13:17:07] -rw-r--r-- 1 boinc boinc       530 Jan 23 13:15 boinc_task_state.xml
[2026-01-23 13:17:07] -rw------- 1 boinc boinc        95 Jan 23 13:15 pilot_heartbeat.json
[2026-01-23 13:17:07] -rw------- 1 boinc boinc      1025 Jan 23 13:15 memory_monitor_summary.json
[2026-01-23 13:17:07] -rw------- 1 boinc boinc    261940 Jan 23 13:16 log.48215263._033891.job.log.tgz.1
[2026-01-23 13:17:07] -rw------- 1 boinc boinc      7744 Jan 23 13:16 heartbeat.json
[2026-01-23 13:17:07] -rw-r--r-- 1 boinc boinc      8192 Jan 23 13:17 boinc_mmap_file
[2026-01-23 13:17:07] -rw-r--r-- 1 boinc boinc        27 Jan 23 13:17 wrapper_checkpoint.txt
[2026-01-23 13:17:07] -rw------- 1 boinc boinc      5089 Jan 23 13:17 pilotlog.txt
[2026-01-23 13:17:07] -rw------- 1 boinc boinc    707803 Jan 23 13:17 log.48215263._033891.job.log.1
[2026-01-23 13:17:07] -rw------- 1 boinc boinc       357 Jan 23 13:17 output.list
[2026-01-23 13:17:07] -rw-r--r-- 1 boinc boinc       620 Jan 23 13:17 runtime_log
[2026-01-23 13:17:07] -rw------- 1 boinc boinc    993280 Jan 23 13:17 result.tar.gz
[2026-01-23 13:17:07] -rw-r--r-- 1 boinc boinc      8892 Jan 23 13:17 runtime_log.err
[2026-01-23 13:17:07] -rw------- 1 boinc boinc       644 Jan 23 13:17 EzlKDmvSM08n9Rq4apOajLDm4fhM0noT9bVo0NGKDmrQmKDmIzrlvn.diag
[2026-01-23 13:17:07] -rw-r--r-- 1 boinc boinc     21966 Jan 23 13:17 stderr.txt
[2026-01-23 13:17:07] HITS file was successfully produced:
[2026-01-23 13:17:07] -rw------- 1 boinc boinc 151574188 Jan 23 13:15 shared/HITS.pool.root.1
[2026-01-23 13:17:07]  *** Contents of shared directory: ***
[2026-01-23 13:17:07] total 727764
[2026-01-23 13:17:07] -rw-r--r-- 2 boinc boinc 592039487 Jan 23 11:56 ATLAS.root_0
[2026-01-23 13:17:07] -rw-r--r-- 2 boinc boinc     15847 Jan 23 11:56 start_atlas.sh
[2026-01-23 13:17:07] -rw-r--r-- 2 boinc boinc    592398 Jan 23 11:56 input.tar.gz
[2026-01-23 13:17:07] -rw------- 1 boinc boinc 151574188 Jan 23 13:15 HITS.pool.root.1
[2026-01-23 13:17:07] -rw------- 1 boinc boinc    993280 Jan 23 13:17 result.tar.gz
13:17:08 (2993362): run_atlas exited; CPU time 17961.863495
13:17:08 (2993362): called boinc_finish(0)

</stderr_txt>
]]>

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