Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
04:37:38 (713082): wrapper (7.7.26015): starting
04:37:38 (713082): wrapper: running run_atlas (--nthreads 8)
[2026-01-23 04:37:38] Arguments: --nthreads 8
[2026-01-23 04:37:38] Threads: 8
[2026-01-23 04:37:38] Checking for CVMFS
[2026-01-23 04:37:39] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-23 04:37:39] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-23 04:37:39] Running cvmfs_config stat atlas.cern.ch
[2026-01-23 04:37:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-23 04:37:40] 2.13.3.0 9651 43528 242436 155428 0 453 33370551 40960001 15692 16776704 0 64646601 99.628 73018026 38135 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-23 04:37:40] CVMFS is ok
[2026-01-23 04:37:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-23 04:37:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-23 04:37:40] Further information can be found at the LHC@home message board.
[2026-01-23 04:37:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-23 04:37:40] Checking for apptainer binary...
[2026-01-23 04:37:40] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-23 04:37:40] Running /usr/bin/apptainer --version
[2026-01-23 04:37:40] apptainer version 1.4.5-2.el9
[2026-01-23 04:37:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-23 04:37:41] c-210-35-4.aglt2.org
[2026-01-23 04:37:41] apptainer works
[2026-01-23 04:37:41] Set ATHENA_PROC_NUMBER=8
[2026-01-23 04:37:41] Set ATHENA_CORE_NUMBER=8
[2026-01-23 04:37:41] Starting ATLAS job with PandaID=6969632320
[2026-01-23 04:37:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-23 06:15:21]  *** The last 200 lines of the pilot log: ***
[2026-01-23 06:15:21] 2026-01-23 11:14:31,703 | INFO     | summary of transferred files:
[2026-01-23 06:15:21] 2026-01-23 11:14:31,703 | INFO     |  -- lfn=log.48215263._033893.job.log.tgz.1, status_code=0, status=transferred
[2026-01-23 06:15:21] 2026-01-23 11:14:31,703 | INFO     | stage-out finished correctly
[2026-01-23 06:15:21] 2026-01-23 11:14:32,381 | INFO     | monitor loop #385: job 0:6969632320 is in state 'finished'
[2026-01-23 06:15:21] 2026-01-23 11:14:32,382 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-23 06:15:21] 2026-01-23 11:14:32,637 | INFO     | time since job start (5787s) is within the limit (349056.0s)
[2026-01-23 06:15:21] 2026-01-23 11:14:34,452 | INFO     | PID=716806 has CPU usage=9.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-23 06:15:21] 2026-01-23 11:14:34,452 | INFO     | .. there are 17 such processes running
[2026-01-23 06:15:21] 2026-01-23 11:14:34,886 | INFO     | monitor loop #386: job 0:6969632320 is in state 'finished'
[2026-01-23 06:15:21] 2026-01-23 11:14:34,886 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-23 06:15:21] 2026-01-23 11:14:35,044 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-23 06:15:21] 2026-01-23 11:14:35,453 | INFO     | time since job start (5790s) is within the limit (349056.0s)
[2026-01-23 06:15:21] 2026-01-23 11:14:36,545 | INFO     | job 6969632320 has state=finished
[2026-01-23 06:15:21] 2026-01-23 11:14:36,546 | INFO     | preparing for final server update for job 6969632320 in state='finished'
[2026-01-23 06:15:21] 2026-01-23 11:14:36,546 | INFO     | this job has now completed (state=finished)
[2026-01-23 06:15:21] 2026-01-23 11:14:36,546 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-23 06:15:21] 2026-01-23 11:14:36,546 | INFO     | log transfer has been attempted: DONE
[2026-01-23 06:15:21] 2026-01-23 11:14:36,546 | INFO     | job 6969632320 has finished - writing final server update
[2026-01-23 06:15:21] 2026-01-23 11:14:36,547 | INFO     | total number of processed events: 400 (read)
[2026-01-23 06:15:21] 2026-01-23 11:14:36,549 | INFO     | executing command: lscpu
[2026-01-23 06:15:21] 2026-01-23 11:14:36,636 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-23 06:15:21] 2026-01-23 11:14:37,391 | INFO     | monitor loop #387: job 0:6969632320 is in state 'finished'
[2026-01-23 06:15:21] 2026-01-23 11:14:37,392 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-23 06:15:21] 2026-01-23 11:14:37,460 | INFO     | time since job start (5792s) is within the limit (349056.0s)
[2026-01-23 06:15:21] 2026-01-23 11:14:39,467 | INFO     | time since job start (5794s) is within the limit (349056.0s)
[2026-01-23 06:15:21] 2026-01-23 11:14:39,897 | INFO     | monitor loop #388: job 0:6969632320 is in state 'finished'
[2026-01-23 06:15:21] 2026-01-23 11:14:39,897 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-23 06:15:21] 2026-01-23 11:14:41,473 | INFO     | time since job start (5796s) is within the limit (349056.0s)
[2026-01-23 06:15:21] 2026-01-23 11:14:42,408 | INFO     | monitor loop #389: job 0:6969632320 is in state 'finished'
[2026-01-23 06:15:21] 2026-01-23 11:14:42,408 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-23 06:15:21] 2026-01-23 11:14:43,480 | INFO     | time since job start (5798s) is within the limit (349056.0s)
[2026-01-23 06:15:21] 2026-01-23 11:14:44,914 | INFO     | monitor loop #390: job 0:6969632320 is in state 'finished'
[2026-01-23 06:15:21] 2026-01-23 11:14:44,914 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-23 06:15:21] 2026-01-23 11:14:45,487 | INFO     | time since job start (5800s) is within the limit (349056.0s)
[2026-01-23 06:15:21] 2026-01-23 11:14:45,487 | INFO     | 5803s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2026-01-23 06:15:21] 2026-01-23 11:14:47,436 | INFO     | monitor loop #391: job 0:6969632320 is in state 'finished'
[2026-01-23 06:15:21] 2026-01-23 11:14:47,436 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-23 06:15:21] 2026-01-23 11:14:47,493 | INFO     | time since job start (5802s) is within the limit (349056.0s)
[2026-01-23 06:15:21] 2026-01-23 11:14:49,225 | INFO     | CPU arch script returned: x86-64-v4
[2026-01-23 06:15:21] 2026-01-23 11:14:49,233 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 2720.5647857142853
[2026-01-23 06:15:21] 2026-01-23 11:14:49,242 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6969632320/memory_monitor_summary.json (trf name=prmon)
[2026-01-23 06:15:21] 2026-01-23 11:14:49,243 | INFO     | extracted standard info from prmon json
[2026-01-23 06:15:21] 2026-01-23 11:14:49,243 | INFO     | extracted standard memory fields from prmon json
[2026-01-23 06:15:21] 2026-01-23 11:14:49,244 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-23 06:15:21] 2026-01-23 11:14:49,244 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-23 06:15:21] 2026-01-23 11:14:49,244 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-23 06:15:21] 2026-01-23 11:14:49,246 | INFO     | fitting pss+swap vs Time
[2026-01-23 06:15:21] 2026-01-23 11:14:49,246 | INFO     | sum of square deviations: 211278216.89772764
[2026-01-23 06:15:21] 2026-01-23 11:14:49,247 | INFO     | sum of deviations: 445311548.784091
[2026-01-23 06:15:21] 2026-01-23 11:14:49,247 | INFO     | mean x: 1769164088.784091
[2026-01-23 06:15:21] 2026-01-23 11:14:49,247 | INFO     | mean y: 2650869.9886363638
[2026-01-23 06:15:21] 2026-01-23 11:14:49,247 | INFO     | intersect: -3726220056.6862087
[2026-01-23 06:15:21] 2026-01-23 11:14:49,247 | INFO     | chi2: 0.0033542552186594755
[2026-01-23 06:15:21] 2026-01-23 11:14:49,247 | INFO     | current memory leak: 2.11 B/s (using 88 data points, chi2=0.00)
[2026-01-23 06:15:21] 2026-01-23 11:14:49,247 | INFO     | could have reported an average CPU frequency of 2806 MHz (7 samples)
[2026-01-23 06:15:21] 2026-01-23 11:14:49,248 | INFO     | ..............................
[2026-01-23 06:15:21] 2026-01-23 11:14:49,248 | INFO     | . Timing measurements:
[2026-01-23 06:15:21] 2026-01-23 11:14:49,248 | INFO     | . get job = 0 s
[2026-01-23 06:15:21] 2026-01-23 11:14:49,248 | INFO     | . initial setup = 2 s
[2026-01-23 06:15:21] 2026-01-23 11:14:49,248 | INFO     | . payload setup = 13 s
[2026-01-23 06:15:21] 2026-01-23 11:14:49,248 | INFO     | . stage-in = 0 s
[2026-01-23 06:15:21] 2026-01-23 11:14:49,248 | INFO     | . payload execution = 5746 s
[2026-01-23 06:15:21] 2026-01-23 11:14:49,248 | INFO     | . stage-out = 2 s
[2026-01-23 06:15:21] 2026-01-23 11:14:49,248 | INFO     | . log creation = 0 s
[2026-01-23 06:15:21] 2026-01-23 11:14:49,248 | INFO     | ..............................
[2026-01-23 06:15:21] 2026-01-23 11:14:49,347 | INFO     | 
[2026-01-23 06:15:21] 2026-01-23 11:14:49,347 | INFO     | job summary report
[2026-01-23 06:15:21] 2026-01-23 11:14:49,347 | INFO     | --------------------------------------------------
[2026-01-23 06:15:21] 2026-01-23 11:14:49,347 | INFO     | PanDA job id: 6969632320
[2026-01-23 06:15:21] 2026-01-23 11:14:49,347 | INFO     | task id: 48215263
[2026-01-23 06:15:21] 2026-01-23 11:14:49,347 | INFO     | errors: (none)
[2026-01-23 06:15:21] 2026-01-23 11:14:49,348 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-23 06:15:21] 2026-01-23 11:14:49,348 | INFO     | pilot state: finished 
[2026-01-23 06:15:21] 2026-01-23 11:14:49,348 | INFO     | transexitcode: 0
[2026-01-23 06:15:21] 2026-01-23 11:14:49,348 | INFO     | exeerrorcode: 0
[2026-01-23 06:15:21] 2026-01-23 11:14:49,348 | INFO     | exeerrordiag: 
[2026-01-23 06:15:21] 2026-01-23 11:14:49,348 | INFO     | exitcode: 0
[2026-01-23 06:15:21] 2026-01-23 11:14:49,348 | INFO     | exitmsg: OK
[2026-01-23 06:15:21] 2026-01-23 11:14:49,348 | INFO     | cpuconsumptiontime: 26240 s
[2026-01-23 06:15:21] 2026-01-23 11:14:49,348 | INFO     | nevents: 400
[2026-01-23 06:15:21] 2026-01-23 11:14:49,348 | INFO     | neventsw: 0
[2026-01-23 06:15:21] 2026-01-23 11:14:49,348 | INFO     | pid: 725108
[2026-01-23 06:15:21] 2026-01-23 11:14:49,348 | INFO     | pgrp: 725108
[2026-01-23 06:15:21] 2026-01-23 11:14:49,349 | INFO     | corecount: 8
[2026-01-23 06:15:21] 2026-01-23 11:14:49,349 | INFO     | event service: False
[2026-01-23 06:15:21] 2026-01-23 11:14:49,349 | INFO     | sizes: {0: 2283952, 9: 2284214, 11: 2284242, 5764: 2311082, 5767: 2320080, 5771: 2320136, 5785: 2320458}
[2026-01-23 06:15:21] 2026-01-23 11:14:49,349 | INFO     | --------------------------------------------------
[2026-01-23 06:15:21] 2026-01-23 11:14:49,349 | INFO     | 
[2026-01-23 06:15:21] 2026-01-23 11:14:49,349 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-01-23 06:15:21] 2026-01-23 11:14:49,382 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-23 06:15:21] 2026-01-23 11:14:49,383 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-23 06:15:21] 2026-01-23 11:14:49,383 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-23 06:15:21] 2026-01-23 11:14:49,383 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-23 06:15:21] 2026-01-23 11:14:49,383 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-23 06:15:21] 2026-01-23 11:14:49,383 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-23 06:15:21] 2026-01-23 11:14:49,384 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-23 06:15:21] 2026-01-23 11:14:49,384 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-23 06:15:21] 2026-01-23 11:14:49,384 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-23 06:15:21] 2026-01-23 11:14:49,384 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-23 06:15:21] 2026-01-23 11:14:49,384 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-23 06:15:21] 2026-01-23 11:14:49,384 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-23 06:15:21] 2026-01-23 11:14:49,384 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-23 06:15:21] 2026-01-23 11:14:49,384 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-23 06:15:21] 2026-01-23 11:14:49,385 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-23 06:15:21] 2026-01-23 11:14:49,385 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-23 06:15:21] 2026-01-23 11:14:49,385 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-23 06:15:21] 2026-01-23 11:14:49,385 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-23 06:15:21] 2026-01-23 11:14:49,385 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-23 06:15:21] 2026-01-23 11:14:49,385 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-23 06:15:21] 2026-01-23 11:14:49,386 | INFO     | job 6969632320 has completed (purged errors)
[2026-01-23 06:15:21] 2026-01-23 11:14:49,386 | INFO     | overall cleanup function is called
[2026-01-23 06:15:21] 2026-01-23 11:14:50,395 | INFO     | --- collectZombieJob: --- 10, [725108]
[2026-01-23 06:15:21] 2026-01-23 11:14:50,395 | INFO     | zombie collector waiting for pid 725108
[2026-01-23 06:15:21] 2026-01-23 11:14:50,396 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-23 06:15:21] 2026-01-23 11:14:50,396 | INFO     | collected zombie processes
[2026-01-23 06:15:21] 2026-01-23 11:14:50,396 | INFO     | will attempt to kill all subprocesses of pid=725108
[2026-01-23 06:15:21] 2026-01-23 11:14:50,771 | INFO     | process IDs to be killed: [725108] (in reverse order)
[2026-01-23 06:15:21] 2026-01-23 11:14:51,067 | WARNING  | found no corresponding commands to process id(s)
[2026-01-23 06:15:21] 2026-01-23 11:14:51,068 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-23 06:15:21] 2026-01-23 11:14:51,089 | INFO     | did not find any defunct processes belonging to 725108
[2026-01-23 06:15:21] 2026-01-23 11:14:51,113 | INFO     | did not find any defunct processes belonging to 725108
[2026-01-23 06:15:21] 2026-01-23 11:14:51,113 | INFO     | ready for new job
[2026-01-23 06:15:21] 2026-01-23 11:14:51,114 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-23 06:15:21] 2026-01-23 11:14:51,116 | INFO     | ***************************************
[2026-01-23 06:15:21] 2026-01-23 11:14:51,116 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-23 06:15:21] 2026-01-23 11:14:51,116 | INFO     | ***************************************
[2026-01-23 06:15:21] 2026-01-23 11:14:51,116 | INFO     | 
[2026-01-23 06:15:21] 2026-01-23 11:14:51,120 | INFO     | architecture information:
[2026-01-23 06:15:21] 2026-01-23 11:14:51,121 | INFO     | executing command: cat /etc/os-release
[2026-01-23 06:15:21] 2026-01-23 11:14:51,146 | INFO     | cat /etc/os-release:
[2026-01-23 06:15:21] NAME="CentOS Linux"
[2026-01-23 06:15:21] VERSION="7 (Core)"
[2026-01-23 06:15:21] ID="centos"
[2026-01-23 06:15:21] ID_LIKE="rhel fedora"
[2026-01-23 06:15:21] VERSION_ID="7"
[2026-01-23 06:15:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-23 06:15:21] ANSI_COLOR="0;31"
[2026-01-23 06:15:21] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-23 06:15:21] HOME_URL="https://www.centos.org/"
[2026-01-23 06:15:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-23 06:15:21] 
[2026-01-23 06:15:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-23 06:15:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-23 06:15:21] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-23 06:15:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-23 06:15:21] 
[2026-01-23 06:15:21] 2026-01-23 11:14:51,146 | INFO     | ***************************************
[2026-01-23 06:15:21] 2026-01-23 11:14:51,649 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-01-23 06:15:21] 2026-01-23 11:14:51,766 | INFO     | sufficient remaining disk space (72117911552 B)
[2026-01-23 06:15:21] 2026-01-23 11:14:51,766 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-23 06:15:21] 2026-01-23 11:14:51,766 | INFO     | current server update state: UPDATING_FINAL
[2026-01-23 06:15:21] 2026-01-23 11:14:51,766 | INFO     | update_server=False
[2026-01-23 06:15:21] 2026-01-23 11:14:51,766 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-23 06:15:21] 2026-01-23 11:14:51,767 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-23 06:15:21] 2026-01-23 11:14:51,767 | INFO     | aborting loop
[2026-01-23 06:15:21] 2026-01-23 11:14:52,446 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-23 06:15:21] 2026-01-23 11:14:52,526 | INFO     | all data control threads have been joined
[2026-01-23 06:15:21] 2026-01-23 11:14:52,772 | INFO     | [job] retrieve thread has finished
[2026-01-23 06:15:21] 2026-01-23 11:14:52,773 | INFO     | [job] job monitor thread has finished
[2026-01-23 06:15:21] 2026-01-23 11:14:52,823 | INFO     | all payload control threads have been joined
[2026-01-23 06:15:21] 2026-01-23 11:14:53,102 | INFO     | all job control threads have been joined
[2026-01-23 06:15:21] 2026-01-23 11:14:53,408 | INFO     | [data] copytool_in thread has finished
[2026-01-23 06:15:21] 2026-01-23 11:14:53,532 | INFO     | [data] control thread has finished
[2026-01-23 06:15:21] 2026-01-23 11:14:53,611 | INFO     | [payload] execute_payloads thread has finished
[2026-01-23 06:15:21] 2026-01-23 11:14:53,829 | INFO     | [payload] control thread has finished
[2026-01-23 06:15:21] 2026-01-23 11:14:53,885 | INFO     | [payload] validate_pre thread has finished
[2026-01-23 06:15:21] 2026-01-23 11:14:53,907 | INFO     | [job] create_data_payload thread has finished
[2026-01-23 06:15:21] 2026-01-23 11:14:53,925 | INFO     | [job] validate thread has finished
[2026-01-23 06:15:21] 2026-01-23 11:14:53,960 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-23 06:15:21] 2026-01-23 11:14:54,058 | INFO     | [payload] failed_post thread has finished
[2026-01-23 06:15:21] 2026-01-23 11:14:54,108 | INFO     | [job] control thread has finished
[2026-01-23 06:15:21] 2026-01-23 11:14:54,304 | INFO     | [payload] validate_post thread has finished
[2026-01-23 06:15:21] 2026-01-23 11:14:54,361 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-23 06:15:21] 2026-01-23 11:14:54,453 | INFO     | [data] copytool_out thread has finished
[2026-01-23 06:15:21] 2026-01-23 11:14:54,793 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-23 06:15:21] 2026-01-23 11:14:55,367 | INFO     | [job] queue monitor thread has finished
[2026-01-23 06:15:21] 2026-01-23 11:14:58,802 | INFO     | [data] queue_monitor thread has finished
[2026-01-23 06:15:21] 2026-01-23 11:15:14,432 | INFO     | [monitor] cgroup control has ended
[2026-01-23 06:15:21] 2026-01-23 11:15:14,796 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139664879236928)>', '<ExcThread(monitor, started 139664509871872)>']
[2026-01-23 06:15:21] 2026-01-23 11:15:19,822 | INFO     | all workflow threads have been joined
[2026-01-23 06:15:21] 2026-01-23 11:15:19,822 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-23 06:15:21] 2026-01-23 11:15:19,823 | INFO     | traces error code: 0
[2026-01-23 06:15:21] 2026-01-23 11:15:19,823 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-23 06:15:21] 2026-01-23 11:15:21,122 | INFO     | PID=716806 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-23 06:15:21] 2026-01-23 11:15:21,123 | INFO     | .. there are 17 such processes running
[2026-01-23 06:15:21] 2026-01-23 11:15:21,124 | INFO     | found 0 job(s) in 20 queues
[2026-01-23 06:15:21] 2026-01-23 11:15:21,124 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-23 06:15:21] 2026-01-23 11:15:21,124 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-23 06:15:21] 2026-01-23 11:15:21,124 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-23 06:15:21] 2026-01-23 11:15:21,125 | INFO     | [monitor] control thread has ended
[2026-01-23 06:15:21] 2026-01-23 11:15:21,323 [wrapper] ==== pilot stdout END ====
[2026-01-23 06:15:21] 2026-01-23 11:15:21,343 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-23 06:15:21] 2026-01-23 11:15:21,350 [wrapper] pilotpid: 716806
[2026-01-23 06:15:21] 2026-01-23 11:15:21,361 [wrapper] Pilot exit status: 0
[2026-01-23 06:15:21] 2026-01-23 11:15:21,404 [wrapper] pandaids: 6969632320
[2026-01-23 06:15:21] 2026-01-23 11:15:21,500 [wrapper] cleanup supervisor_pilot  931209 716807
[2026-01-23 06:15:21] 2026-01-23 11:15:21,505 [wrapper] Test setup, not cleaning
[2026-01-23 06:15:21] 2026-01-23 11:15:21,508 [wrapper] apfmon messages muted
[2026-01-23 06:15:21] 2026-01-23 11:15:21,513 [wrapper] ==== wrapper stdout END ====
[2026-01-23 06:15:21] 2026-01-23 11:15:21,517 [wrapper] ==== wrapper stderr END ====
[2026-01-23 06:15:21]  *** Error codes and diagnostics ***
[2026-01-23 06:15:21]     "exeErrorCode": 0,
[2026-01-23 06:15:21]     "exeErrorDiag": "",
[2026-01-23 06:15:21]     "pilotErrorCode": 0,
[2026-01-23 06:15:21]     "pilotErrorDiag": "",
[2026-01-23 06:15:21]  *** Listing of results directory ***
[2026-01-23 06:15:21] total 726296
[2026-01-23 06:15:21] -rw-r--r--. 1 boincer umatlas      5112 Jan 14 15:15 queuedata.json
[2026-01-23 06:15:21] -rw-r--r--. 1 boincer umatlas    579449 Jan 14 15:15 pilot3.tar.gz
[2026-01-23 06:15:21] -rwx------. 1 boincer umatlas     36322 Jan 14 15:16 runpilot2-wrapper.sh
[2026-01-23 06:15:21] -rw-r--r--. 1 boincer umatlas       100 Jan 23 04:37 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-23 06:15:21] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 23 04:37 run_atlas
[2026-01-23 06:15:21] -rw-r--r--. 1 boincer umatlas       105 Jan 23 04:37 job.xml
[2026-01-23 06:15:21] -rw-r--r--. 2 boincer umatlas 592039487 Jan 23 04:37 EVNT.32794306._001355.pool.root.1
[2026-01-23 06:15:21] -rw-r--r--. 2 boincer umatlas    592400 Jan 23 04:37 input.tar.gz
[2026-01-23 06:15:21] -rw-r--r--. 2 boincer umatlas     15847 Jan 23 04:37 start_atlas.sh
[2026-01-23 06:15:21] drwxrwx--x. 2 boincer umatlas      4096 Jan 23 04:37 shared
[2026-01-23 06:15:21] -rw-r--r--. 1 boincer umatlas         0 Jan 23 04:37 boinc_lockfile
[2026-01-23 06:15:21] -rw-r--r--. 1 boincer umatlas      2509 Jan 23 04:37 pandaJob.out
[2026-01-23 06:15:21] -rw-------. 1 boincer umatlas        57 Jan 23 04:37 setup.sh.local
[2026-01-23 06:15:21] -rw-------. 1 boincer umatlas   1003905 Jan 23 04:38 agis_schedconf.cvmfs.json
[2026-01-23 06:15:21] -rw-------. 1 boincer umatlas   1516246 Jan 23 04:38 agis_ddmendpoints.agis.ALL.json
[2026-01-23 06:15:21] drwx------. 5 boincer umatlas      4096 Jan 23 04:38 pilot3
[2026-01-23 06:15:21] -rw-r--r--. 1 boincer umatlas      6839 Jan 23 06:12 init_data.xml
[2026-01-23 06:15:21] -rw-------. 1 boincer umatlas 145465151 Jan 23 06:13 HITS.48215263._033893.pool.root.1
[2026-01-23 06:15:21] -rw-r--r--. 1 boincer umatlas       530 Jan 23 06:13 boinc_task_state.xml
[2026-01-23 06:15:21] -rw-------. 1 boincer umatlas      1038 Jan 23 06:14 memory_monitor_summary.json
[2026-01-23 06:15:21] -rw-------. 1 boincer umatlas    342064 Jan 23 06:14 log.48215263._033893.job.log.tgz.1
[2026-01-23 06:15:21] -rw-------. 1 boincer umatlas      7817 Jan 23 06:14 heartbeat.json
[2026-01-23 06:15:21] -rw-r--r--. 1 boincer umatlas        27 Jan 23 06:15 wrapper_checkpoint.txt
[2026-01-23 06:15:21] -rw-------. 1 boincer umatlas        95 Jan 23 06:15 pilot_heartbeat.json
[2026-01-23 06:15:21] -rw-------. 1 boincer umatlas       822 Jan 23 06:15 pilotlog.txt
[2026-01-23 06:15:21] -rw-------. 1 boincer umatlas    804207 Jan 23 06:15 log.48215263._033893.job.log.1
[2026-01-23 06:15:21] -rw-------. 1 boincer umatlas       357 Jan 23 06:15 output.list
[2026-01-23 06:15:21] -rw-r--r--. 1 boincer umatlas       620 Jan 23 06:15 runtime_log
[2026-01-23 06:15:21] -rw-------. 1 boincer umatlas   1167360 Jan 23 06:15 result.tar.gz
[2026-01-23 06:15:21] -rw-r--r--. 1 boincer umatlas      8192 Jan 23 06:15 boinc_mmap_file
[2026-01-23 06:15:21] -rw-r--r--. 1 boincer umatlas      9352 Jan 23 06:15 runtime_log.err
[2026-01-23 06:15:21] -rw-------. 1 boincer umatlas       652 Jan 23 06:15 CRnKDmvSM08n9Rq4apOajLDm4fhM0noT9bVo0NGKDmsQmKDmUIczSn.diag
[2026-01-23 06:15:21] -rw-r--r--. 1 boincer umatlas     22295 Jan 23 06:15 stderr.txt
[2026-01-23 06:15:21] HITS file was successfully produced:
[2026-01-23 06:15:21] -rw-------. 1 boincer umatlas 145465151 Jan 23 06:13 shared/HITS.pool.root.1
[2026-01-23 06:15:21]  *** Contents of shared directory: ***
[2026-01-23 06:15:21] total 721964
[2026-01-23 06:15:21] -rw-r--r--. 2 boincer umatlas 592039487 Jan 23 04:37 ATLAS.root_0
[2026-01-23 06:15:21] -rw-r--r--. 2 boincer umatlas    592400 Jan 23 04:37 input.tar.gz
[2026-01-23 06:15:21] -rw-r--r--. 2 boincer umatlas     15847 Jan 23 04:37 start_atlas.sh
[2026-01-23 06:15:21] -rw-------. 1 boincer umatlas 145465151 Jan 23 06:13 HITS.pool.root.1
[2026-01-23 06:15:21] -rw-------. 1 boincer umatlas   1167360 Jan 23 06:15 result.tar.gz
06:15:44 (713082): run_atlas exited; CPU time 26347.003945
06:15:44 (713082): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN