Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
17:39:54 (1653082): wrapper (7.7.26015): starting
17:39:54 (1653082): wrapper: running run_atlas (--nthreads 6)
[2026-01-23 17:39:54] Arguments: --nthreads 6
[2026-01-23 17:39:54] Threads: 6
[2026-01-23 17:39:54] Checking for CVMFS
[2026-01-23 17:39:54] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-23 17:40:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-23 17:40:12] Running cvmfs_config stat atlas.cern.ch
[2026-01-23 17:40:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-23 17:40:13] 2.13.3.0 1625780 103 50552 155428 0 188 13306583 20971521 929 130560 0 88665 99.997 4026 16 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2026-01-23 17:40:13] CVMFS is ok
[2026-01-23 17:40:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-23 17:40:13] Checking for apptainer binary...
[2026-01-23 17:40:13] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-23 17:40:13] Running /usr/bin/apptainer --version
[2026-01-23 17:40:13] apptainer version 1.4.5-2.el9
[2026-01-23 17:40:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-23 17:40:13] testio005
[2026-01-23 17:40:13] apptainer works
[2026-01-23 17:40:13] Set ATHENA_PROC_NUMBER=6
[2026-01-23 17:40:13] Set ATHENA_CORE_NUMBER=6
[2026-01-23 17:40:13] Starting ATLAS job with PandaID=6977659154
[2026-01-23 17:40:13] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-23 19:23:01]  *** The last 200 lines of the pilot log: ***
[2026-01-23 19:23:01]  lfn=log.48301086._008244.job.log.tgz.1
[2026-01-23 19:23:01]  mtime=0
[2026-01-23 19:23:01]  protocol_id=None
[2026-01-23 19:23:01]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-23 19:23:01]  replicas=None
[2026-01-23 19:23:01]  scope=mc23_13p6TeV
[2026-01-23 19:23:01]  status=None
[2026-01-23 19:23:01]  status_code=0
[2026-01-23 19:23:01]  storage_token=
[2026-01-23 19:23:01]  surl=/var/lib/boinc/slots/2/PanDA_Pilot-6977659154/log.48301086._008244.job.log.tgz.1
[2026-01-23 19:23:01]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/be/c8/log.48301086._008244.job.log.tgz.1
[2026-01-23 19:23:01]  workdir=None
[2026-01-23 19:23:01] ]
[2026-01-23 19:23:01] 2026-01-23 10:22:25,900 | INFO     | transferring file log.48301086._008244.job.log.tgz.1 from /var/lib/boinc/slots/2/PanDA_Pilot-6977659154/log.48301086._008244.job.log.tgz.1 to /var/lib/boinc/slots/
[2026-01-23 19:23:01] 2026-01-23 10:22:25,900 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/2/PanDA_Pilot-6977659154/log.48301086._008244.job.log.tgz.1 /var/lib/boinc/slots/2/log.48301086._008244.job
[2026-01-23 19:23:01] 2026-01-23 10:22:25,918 | INFO     | adding to output.list: log.48301086._008244.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/be/c8/log.48301086._008244.job.log.tg
[2026-01-23 19:23:01] 2026-01-23 10:22:25,919 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-23 19:23:01] 2026-01-23 10:22:25,919 | INFO     | summary of transferred files:
[2026-01-23 19:23:01] 2026-01-23 10:22:25,919 | INFO     |  -- lfn=log.48301086._008244.job.log.tgz.1, status_code=0, status=transferred
[2026-01-23 19:23:01] 2026-01-23 10:22:25,919 | INFO     | stage-out finished correctly
[2026-01-23 19:23:01] 2026-01-23 10:22:26,057 | INFO     | time since job start (6061s) is within the limit (349056.0s)
[2026-01-23 19:23:01] 2026-01-23 10:22:26,506 | INFO     | monitor loop #462: job 0:6977659154 is in state 'finished'
[2026-01-23 19:23:01] 2026-01-23 10:22:26,506 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-23 19:23:01] 2026-01-23 10:22:27,157 | INFO     | PID=1657206 has CPU usage=6.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-23 19:23:01] 2026-01-23 10:22:27,157 | INFO     | .. there are 2 such processes running
[2026-01-23 19:23:01] 2026-01-23 10:22:28,157 | INFO     | time since job start (6063s) is within the limit (349056.0s)
[2026-01-23 19:23:01] 2026-01-23 10:22:29,009 | INFO     | monitor loop #463: job 0:6977659154 is in state 'finished'
[2026-01-23 19:23:01] 2026-01-23 10:22:29,009 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-23 19:23:01] 2026-01-23 10:22:29,277 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-23 19:23:01] 2026-01-23 10:22:29,361 | INFO     | job 6977659154 has state=finished
[2026-01-23 19:23:01] 2026-01-23 10:22:29,361 | INFO     | preparing for final server update for job 6977659154 in state='finished'
[2026-01-23 19:23:01] 2026-01-23 10:22:29,361 | INFO     | reading metadata from: /var/lib/boinc/slots/2/PanDA_Pilot-6977659154/jobReport.json
[2026-01-23 19:23:01] 2026-01-23 10:22:29,364 | INFO     | added worker_node to metadata from /var/lib/boinc/slots/2/workernode_map.json
[2026-01-23 19:23:01] 2026-01-23 10:22:29,364 | INFO     | this job has now completed (state=finished)
[2026-01-23 19:23:01] 2026-01-23 10:22:29,364 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-23 19:23:01] 2026-01-23 10:22:29,364 | INFO     | log transfer has been attempted: DONE
[2026-01-23 19:23:01] 2026-01-23 10:22:29,364 | INFO     | job 6977659154 has finished - writing final server update
[2026-01-23 19:23:01] 2026-01-23 10:22:29,365 | INFO     | total number of processed events: 400 (read)
[2026-01-23 19:23:01] 2026-01-23 10:22:29,368 | INFO     | using path: /var/lib/boinc/slots/2/PanDA_Pilot-6977659154/memory_monitor_summary.json (trf name=prmon)
[2026-01-23 19:23:01] 2026-01-23 10:22:29,369 | INFO     | extracted standard info from prmon json
[2026-01-23 19:23:01] 2026-01-23 10:22:29,369 | INFO     | extracted standard memory fields from prmon json
[2026-01-23 19:23:01] 2026-01-23 10:22:29,369 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-23 19:23:01] 2026-01-23 10:22:29,369 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-23 19:23:01] 2026-01-23 10:22:29,369 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-23 19:23:01] 2026-01-23 10:22:29,371 | INFO     | fitting pss+swap vs Time
[2026-01-23 19:23:01] 2026-01-23 10:22:29,371 | INFO     | sum of square deviations: 241429643.0
[2026-01-23 19:23:01] 2026-01-23 10:22:29,372 | INFO     | sum of deviations: 9537738814.000004
[2026-01-23 19:23:01] 2026-01-23 10:22:29,372 | INFO     | mean x: 1769160788.5
[2026-01-23 19:23:01] 2026-01-23 10:22:29,372 | INFO     | mean y: 2683749.2608695654
[2026-01-23 19:23:01] 2026-01-23 10:22:29,372 | INFO     | intersect: -69888458494.12679
[2026-01-23 19:23:01] 2026-01-23 10:22:29,372 | INFO     | chi2: 0.06391324867403061
[2026-01-23 19:23:01] 2026-01-23 10:22:29,372 | INFO     | current memory leak: 39.51 B/s (using 92 data points, chi2=0.06)
[2026-01-23 19:23:01] 2026-01-23 10:22:29,373 | INFO     | could have reported an average CPU frequency of 3312 MHz (7 samples)
[2026-01-23 19:23:01] 2026-01-23 10:22:29,373 | INFO     | ..............................
[2026-01-23 19:23:01] 2026-01-23 10:22:29,373 | INFO     | . Timing measurements:
[2026-01-23 19:23:01] 2026-01-23 10:22:29,373 | INFO     | . get job = 0 s
[2026-01-23 19:23:01] 2026-01-23 10:22:29,373 | INFO     | . initial setup = 9 s
[2026-01-23 19:23:01] 2026-01-23 10:22:29,373 | INFO     | . payload setup = 6 s
[2026-01-23 19:23:01] 2026-01-23 10:22:29,373 | INFO     | . stage-in = 0 s
[2026-01-23 19:23:01] 2026-01-23 10:22:29,373 | INFO     | . payload execution = 6038 s
[2026-01-23 19:23:01] 2026-01-23 10:22:29,373 | INFO     | . stage-out = 0 s
[2026-01-23 19:23:01] 2026-01-23 10:22:29,373 | INFO     | . log creation = 0 s
[2026-01-23 19:23:01] 2026-01-23 10:22:29,373 | INFO     | ..............................
[2026-01-23 19:23:01] 2026-01-23 10:22:29,496 | INFO     | 
[2026-01-23 19:23:01] 2026-01-23 10:22:29,496 | INFO     | job summary report
[2026-01-23 19:23:01] 2026-01-23 10:22:29,496 | INFO     | --------------------------------------------------
[2026-01-23 19:23:01] 2026-01-23 10:22:29,496 | INFO     | PanDA job id: 6977659154
[2026-01-23 19:23:01] 2026-01-23 10:22:29,496 | INFO     | task id: 48301086
[2026-01-23 19:23:01] 2026-01-23 10:22:29,496 | INFO     | errors: (none)
[2026-01-23 19:23:01] 2026-01-23 10:22:29,496 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-23 19:23:01] 2026-01-23 10:22:29,496 | INFO     | pilot state: finished 
[2026-01-23 19:23:01] 2026-01-23 10:22:29,496 | INFO     | transexitcode: 0
[2026-01-23 19:23:01] 2026-01-23 10:22:29,496 | INFO     | exeerrorcode: 0
[2026-01-23 19:23:01] 2026-01-23 10:22:29,497 | INFO     | exeerrordiag: 
[2026-01-23 19:23:01] 2026-01-23 10:22:29,497 | INFO     | exitcode: 0
[2026-01-23 19:23:01] 2026-01-23 10:22:29,497 | INFO     | exitmsg: OK
[2026-01-23 19:23:01] 2026-01-23 10:22:29,497 | INFO     | cpuconsumptiontime: 33306 s
[2026-01-23 19:23:01] 2026-01-23 10:22:29,497 | INFO     | nevents: 400
[2026-01-23 19:23:01] 2026-01-23 10:22:29,497 | INFO     | neventsw: 0
[2026-01-23 19:23:01] 2026-01-23 10:22:29,497 | INFO     | pid: 1661815
[2026-01-23 19:23:01] 2026-01-23 10:22:29,497 | INFO     | pgrp: 1661815
[2026-01-23 19:23:01] 2026-01-23 10:22:29,497 | INFO     | corecount: 6
[2026-01-23 19:23:01] 2026-01-23 10:22:29,497 | INFO     | event service: False
[2026-01-23 19:23:01] 2026-01-23 10:22:29,497 | INFO     | sizes: {0: 2284240, 11: 2284240, 6048: 2311080, 6049: 2320078, 6052: 2320328}
[2026-01-23 19:23:01] 2026-01-23 10:22:29,497 | INFO     | --------------------------------------------------
[2026-01-23 19:23:01] 2026-01-23 10:22:29,498 | INFO     | 
[2026-01-23 19:23:01] 2026-01-23 10:22:29,498 | INFO     | executing command: ls -lF /var/lib/boinc/slots/2
[2026-01-23 19:23:01] 2026-01-23 10:22:29,518 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-23 19:23:01] 2026-01-23 10:22:29,518 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-23 19:23:01] 2026-01-23 10:22:29,518 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-23 19:23:01] 2026-01-23 10:22:29,518 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-23 19:23:01] 2026-01-23 10:22:29,518 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-23 19:23:01] 2026-01-23 10:22:29,518 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-23 19:23:01] 2026-01-23 10:22:29,519 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-23 19:23:01] 2026-01-23 10:22:29,519 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-23 19:23:01] 2026-01-23 10:22:29,519 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-23 19:23:01] 2026-01-23 10:22:29,519 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-23 19:23:01] 2026-01-23 10:22:29,519 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-23 19:23:01] 2026-01-23 10:22:29,519 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-23 19:23:01] 2026-01-23 10:22:29,519 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-23 19:23:01] 2026-01-23 10:22:29,519 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-23 19:23:01] 2026-01-23 10:22:29,519 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-23 19:23:01] 2026-01-23 10:22:29,519 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-23 19:23:01] 2026-01-23 10:22:29,520 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-23 19:23:01] 2026-01-23 10:22:29,520 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-23 19:23:01] 2026-01-23 10:22:29,520 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-23 19:23:01] 2026-01-23 10:22:29,520 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-23 19:23:01] 2026-01-23 10:22:29,520 | INFO     | job 6977659154 has completed (purged errors)
[2026-01-23 19:23:01] 2026-01-23 10:22:29,520 | INFO     | overall cleanup function is called
[2026-01-23 19:23:01] 2026-01-23 10:22:30,527 | INFO     | --- collectZombieJob: --- 10, [1661815]
[2026-01-23 19:23:01] 2026-01-23 10:22:30,527 | INFO     | zombie collector waiting for pid 1661815
[2026-01-23 19:23:01] 2026-01-23 10:22:30,527 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-23 19:23:01] 2026-01-23 10:22:30,527 | INFO     | collected zombie processes
[2026-01-23 19:23:01] 2026-01-23 10:22:30,527 | INFO     | will attempt to kill all subprocesses of pid=1661815
[2026-01-23 19:23:01] 2026-01-23 10:22:30,637 | INFO     | process IDs to be killed: [1661815] (in reverse order)
[2026-01-23 19:23:01] 2026-01-23 10:22:30,679 | WARNING  | found no corresponding commands to process id(s)
[2026-01-23 19:23:01] 2026-01-23 10:22:30,679 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-23 19:23:01] 2026-01-23 10:22:30,683 | INFO     | did not find any defunct processes belonging to 1661815
[2026-01-23 19:23:01] 2026-01-23 10:22:30,686 | INFO     | did not find any defunct processes belonging to 1661815
[2026-01-23 19:23:01] 2026-01-23 10:22:30,686 | INFO     | ready for new job
[2026-01-23 19:23:01] 2026-01-23 10:22:30,686 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-23 19:23:01] 2026-01-23 10:22:30,688 | INFO     | **************************************
[2026-01-23 19:23:01] 2026-01-23 10:22:30,688 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-23 19:23:01] 2026-01-23 10:22:30,688 | INFO     | **************************************
[2026-01-23 19:23:01] 2026-01-23 10:22:30,688 | INFO     | 
[2026-01-23 19:23:01] 2026-01-23 10:22:30,689 | INFO     | architecture information:
[2026-01-23 19:23:01] 2026-01-23 10:22:30,689 | INFO     | executing command: cat /etc/os-release
[2026-01-23 19:23:01] 2026-01-23 10:22:30,703 | INFO     | cat /etc/os-release:
[2026-01-23 19:23:01] NAME="CentOS Linux"
[2026-01-23 19:23:01] VERSION="7 (Core)"
[2026-01-23 19:23:01] ID="centos"
[2026-01-23 19:23:01] ID_LIKE="rhel fedora"
[2026-01-23 19:23:01] VERSION_ID="7"
[2026-01-23 19:23:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-23 19:23:01] ANSI_COLOR="0;31"
[2026-01-23 19:23:01] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-23 19:23:01] HOME_URL="https://www.centos.org/"
[2026-01-23 19:23:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-23 19:23:01] 
[2026-01-23 19:23:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-23 19:23:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-23 19:23:01] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-23 19:23:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-23 19:23:01] 
[2026-01-23 19:23:01] 2026-01-23 10:22:30,704 | INFO     | **************************************
[2026-01-23 19:23:01] 2026-01-23 10:22:31,207 | INFO     | executing command: df -mP /var/lib/boinc/slots/2
[2026-01-23 19:23:01] 2026-01-23 10:22:31,222 | INFO     | sufficient remaining disk space (96558120960 B)
[2026-01-23 19:23:01] 2026-01-23 10:22:31,222 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-23 19:23:01] 2026-01-23 10:22:31,222 | INFO     | current server update state: UPDATING_FINAL
[2026-01-23 19:23:01] 2026-01-23 10:22:31,222 | INFO     | update_server=False
[2026-01-23 19:23:01] 2026-01-23 10:22:31,222 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-23 19:23:01] 2026-01-23 10:22:31,222 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-23 19:23:01] 2026-01-23 10:22:31,222 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-23 19:23:01] 2026-01-23 10:22:31,508 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-23 19:23:01] 2026-01-23 10:22:31,512 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-23 19:23:01] 2026-01-23 10:22:31,512 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-23 19:23:01] 2026-01-23 10:22:31,512 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-23 19:23:01] 2026-01-23 10:22:31,512 | INFO     | will abort loop
[2026-01-23 19:23:01] 2026-01-23 10:22:31,972 | INFO     | all payload control threads have been joined
[2026-01-23 19:23:01] 2026-01-23 10:22:32,056 | INFO     | all data control threads have been joined
[2026-01-23 19:23:01] 2026-01-23 10:22:32,227 | INFO     | [job] retrieve thread has finished
[2026-01-23 19:23:01] 2026-01-23 10:22:32,228 | INFO     | [job] queue monitor thread has finished
[2026-01-23 19:23:01] 2026-01-23 10:22:32,235 | INFO     | [job] create_data_payload thread has finished
[2026-01-23 19:23:01] 2026-01-23 10:22:32,386 | INFO     | [payload] validate_pre thread has finished
[2026-01-23 19:23:01] 2026-01-23 10:22:32,517 | INFO     | [job] job monitor thread has finished
[2026-01-23 19:23:01] 2026-01-23 10:22:32,552 | INFO     | [payload] validate_post thread has finished
[2026-01-23 19:23:01] 2026-01-23 10:22:32,587 | INFO     | [data] copytool_in thread has finished
[2026-01-23 19:23:01] 2026-01-23 10:22:32,892 | INFO     | all job control threads have been joined
[2026-01-23 19:23:01] 2026-01-23 10:22:32,975 | INFO     | [payload] control thread has finished
[2026-01-23 19:23:01] 2026-01-23 10:22:33,061 | INFO     | [data] control thread has finished
[2026-01-23 19:23:01] 2026-01-23 10:22:33,241 | INFO     | [payload] failed_post thread has finished
[2026-01-23 19:23:01] 2026-01-23 10:22:33,512 | INFO     | [data] copytool_out thread has finished
[2026-01-23 19:23:01] 2026-01-23 10:22:33,519 | INFO     | [job] validate thread has finished
[2026-01-23 19:23:01] 2026-01-23 10:22:33,588 | INFO     | [payload] execute_payloads thread has finished
[2026-01-23 19:23:01] 2026-01-23 10:22:33,612 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-23 19:23:01] 2026-01-23 10:22:33,897 | INFO     | [job] control thread has finished
[2026-01-23 19:23:01] 2026-01-23 10:22:35,228 | INFO     | [data] queue_monitor thread has finished
[2026-01-23 19:23:01] 2026-01-23 10:22:35,315 | INFO     | [monitor] cgroup control has ended
[2026-01-23 19:23:01] 2026-01-23 10:22:35,420 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139627389613888)>', '<ExcThread(monitor, started 139627037980416)>']
[2026-01-23 19:23:01] 2026-01-23 10:22:40,445 | INFO     | all workflow threads have been joined
[2026-01-23 19:23:01] 2026-01-23 10:22:40,445 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-23 19:23:01] 2026-01-23 10:22:40,445 | INFO     | traces error code: 0
[2026-01-23 19:23:01] 2026-01-23 10:22:40,445 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-23 19:23:01] 2026-01-23 10:23:01,355 | INFO     | PID=1657206 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-23 19:23:01] 2026-01-23 10:23:01,355 | INFO     | .. there are 2 such processes running
[2026-01-23 19:23:01] 2026-01-23 10:23:01,356 | INFO     | found 0 job(s) in 20 queues
[2026-01-23 19:23:01] 2026-01-23 10:23:01,356 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-23 19:23:01] 2026-01-23 10:23:01,356 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-23 19:23:01] 2026-01-23 10:23:01,356 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-23 19:23:01] 2026-01-23 10:23:01,356 | INFO     | [monitor] control thread has ended
[2026-01-23 19:23:01] 2026-01-23 10:23:01,457 [wrapper] ==== pilot stdout END ====
[2026-01-23 19:23:01] 2026-01-23 10:23:01,460 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-23 19:23:01] 2026-01-23 10:23:01,463 [wrapper] pilotpid: 1657206
[2026-01-23 19:23:01] 2026-01-23 10:23:01,465 [wrapper] Pilot exit status: 0
[2026-01-23 19:23:01] 2026-01-23 10:23:01,475 [wrapper] pandaids: 6977659154
[2026-01-23 19:23:01] 2026-01-23 10:23:01,503 [wrapper] cleanup supervisor_pilot 1667036 1657207
[2026-01-23 19:23:01] 2026-01-23 10:23:01,507 [wrapper] Test setup, not cleaning
[2026-01-23 19:23:01] 2026-01-23 10:23:01,510 [wrapper] apfmon messages muted
[2026-01-23 19:23:01] 2026-01-23 10:23:01,513 [wrapper] ==== wrapper stdout END ====
[2026-01-23 19:23:01] 2026-01-23 10:23:01,515 [wrapper] ==== wrapper stderr END ====
[2026-01-23 19:23:01]  *** Error codes and diagnostics ***
[2026-01-23 19:23:01]     "exeErrorCode": 0,
[2026-01-23 19:23:01]     "exeErrorDiag": "",
[2026-01-23 19:23:01]     "pilotErrorCode": 0,
[2026-01-23 19:23:01]     "pilotErrorDiag": "",
[2026-01-23 19:23:01]  *** Listing of results directory ***
[2026-01-23 19:23:01] total 670188
[2026-01-23 19:23:01] -rwx------. 1 boinc boinc     36322 Jan 23 00:22 runpilot2-wrapper.sh
[2026-01-23 19:23:01] -rw-r--r--. 1 boinc boinc    584422 Jan 23 00:26 pilot3.tar.gz
[2026-01-23 19:23:01] -rw-r--r--. 1 boinc boinc      5111 Jan 23 00:27 queuedata.json
[2026-01-23 19:23:01] -rw-r--r--. 1 boinc boinc       100 Jan 23 17:39 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-23 19:23:01] -rwxr-xr-x. 1 boinc boinc      7986 Jan 23 17:39 run_atlas
[2026-01-23 19:23:01] -rw-r--r--. 1 boinc boinc       105 Jan 23 17:39 job.xml
[2026-01-23 19:23:01] -rw-r--r--. 1 boinc boinc      9356 Jan 23 17:39 init_data.xml
[2026-01-23 19:23:01] -rw-r--r--. 2 boinc boinc 496074633 Jan 23 17:39 EVNT.48301084._000150.pool.root.1
[2026-01-23 19:23:01] -rw-r--r--. 2 boinc boinc     15845 Jan 23 17:39 start_atlas.sh
[2026-01-23 19:23:01] drwxrwx--x. 2 boinc boinc        68 Jan 23 17:39 shared
[2026-01-23 19:23:01] -rw-r--r--. 2 boinc boinc    597761 Jan 23 17:39 input.tar.gz
[2026-01-23 19:23:01] -rw-r--r--. 1 boinc boinc         0 Jan 23 17:39 boinc_lockfile
[2026-01-23 19:23:01] -rw-r--r--. 1 boinc boinc      2521 Jan 23 17:40 pandaJob.out
[2026-01-23 19:23:01] -rw-------. 1 boinc boinc   1003905 Jan 23 17:41 agis_schedconf.cvmfs.json
[2026-01-23 19:23:01] -rw-------. 1 boinc boinc   1516246 Jan 23 17:41 agis_ddmendpoints.agis.ALL.json
[2026-01-23 19:23:01] -rw-------. 1 boinc boinc       424 Jan 23 17:41 workernode_map.json
[2026-01-23 19:23:01] drwx------. 5 boinc boinc      4096 Jan 23 17:41 pilot3
[2026-01-23 19:23:01] -rw-------. 1 boinc boinc 183807979 Jan 23 19:21 HITS.48301086._008244.pool.root.1
[2026-01-23 19:23:01] -rw-------. 1 boinc boinc        95 Jan 23 19:22 pilot_heartbeat.json
[2026-01-23 19:23:01] -rw-r--r--. 1 boinc boinc       530 Jan 23 19:22 boinc_task_state.xml
[2026-01-23 19:23:01] -rw-------. 1 boinc boinc      1019 Jan 23 19:22 memory_monitor_summary.json
[2026-01-23 19:23:01] -rw-------. 1 boinc boinc    342015 Jan 23 19:22 log.48301086._008244.job.log.tgz.1
[2026-01-23 19:23:01] -rw-------. 1 boinc boinc      6297 Jan 23 19:22 heartbeat.json
[2026-01-23 19:23:01] -rw-r--r--. 1 boinc boinc      8192 Jan 23 19:22 boinc_mmap_file
[2026-01-23 19:23:01] -rw-r--r--. 1 boinc boinc        27 Jan 23 19:22 wrapper_checkpoint.txt
[2026-01-23 19:23:01] -rw-------. 1 boinc boinc       822 Jan 23 19:23 pilotlog.txt
[2026-01-23 19:23:01] -rw-------. 1 boinc boinc    889405 Jan 23 19:23 log.48301086._008244.job.log.1
[2026-01-23 19:23:01] -rw-------. 1 boinc boinc       357 Jan 23 19:23 output.list
[2026-01-23 19:23:01] -rw-r--r--. 1 boinc boinc       620 Jan 23 19:23 runtime_log
[2026-01-23 19:23:01] -rw-------. 1 boinc boinc   1249280 Jan 23 19:23 result.tar.gz
[2026-01-23 19:23:01] -rw-r--r--. 1 boinc boinc      8774 Jan 23 19:23 runtime_log.err
[2026-01-23 19:23:01] -rw-------. 1 boinc boinc       641 Jan 23 19:23 O7uNDmMhB38nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm0q0KDm4HApKn.diag
[2026-01-23 19:23:01] -rw-r--r--. 1 boinc boinc     21390 Jan 23 19:23 stderr.txt
[2026-01-23 19:23:01] HITS file was successfully produced:
[2026-01-23 19:23:01] -rw-------. 1 boinc boinc 183807979 Jan 23 19:21 shared/HITS.pool.root.1
[2026-01-23 19:23:01]  *** Contents of shared directory: ***
[2026-01-23 19:23:01] total 665768
[2026-01-23 19:23:01] -rw-r--r--. 2 boinc boinc 496074633 Jan 23 17:39 ATLAS.root_0
[2026-01-23 19:23:01] -rw-r--r--. 2 boinc boinc     15845 Jan 23 17:39 start_atlas.sh
[2026-01-23 19:23:01] -rw-r--r--. 2 boinc boinc    597761 Jan 23 17:39 input.tar.gz
[2026-01-23 19:23:01] -rw-------. 1 boinc boinc 183807979 Jan 23 19:21 HITS.pool.root.1
[2026-01-23 19:23:01] -rw-------. 1 boinc boinc   1249280 Jan 23 19:23 result.tar.gz
19:23:03 (1653082): run_atlas exited; CPU time 33361.208268
19:23:03 (1653082): called boinc_finish(0)

</stderr_txt>
]]>

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