Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:19:14 (1032491): wrapper (7.7.26015): starting
00:19:14 (1032491): wrapper: running run_atlas (--nthreads 12)
[2026-01-23 00:19:14] Arguments: --nthreads 12
[2026-01-23 00:19:14] Threads: 12
[2026-01-23 00:19:14] Checking for CVMFS
[2026-01-23 00:19:15] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-23 00:19:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-23 00:19:15] Running cvmfs_config stat atlas.cern.ch
[2026-01-23 00:19:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-23 00:19:15] 2.11.5.0 3295111 76478 237984 155428 0 422 39648735 45568001 18487 130560 0 635431454 99.803 361519250 19628 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.164:3129 1
[2026-01-23 00:19:15] CVMFS is ok
[2026-01-23 00:19:15] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-23 00:19:15] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-23 00:19:15] Further information can be found at the LHC@home message board.
[2026-01-23 00:19:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-23 00:19:15] Checking for apptainer binary...
[2026-01-23 00:19:15] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-23 00:19:15] Running /usr/bin/apptainer --version
[2026-01-23 00:19:15] apptainer version 1.4.1-1.el9
[2026-01-23 00:19:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-23 00:19:16] wns0096.triumf.lcg
[2026-01-23 00:19:16] apptainer works
[2026-01-23 00:19:16] Set ATHENA_PROC_NUMBER=12
[2026-01-23 00:19:16] Set ATHENA_CORE_NUMBER=12
[2026-01-23 00:19:16] Starting ATLAS job with PandaID=6978165517
[2026-01-23 00:19:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-23 00:22:57]  *** The last 200 lines of the pilot log: ***
[2026-01-23 00:22:57] 2026-01-23 08:22:23,826 | INFO     | could have reported an average CPU frequency of 2739 MHz (4 samples)
[2026-01-23 00:22:57] 2026-01-23 08:22:23,826 | INFO     | ..............................
[2026-01-23 00:22:57] 2026-01-23 08:22:23,826 | INFO     | . Timing measurements:
[2026-01-23 00:22:57] 2026-01-23 08:22:23,826 | INFO     | . get job = 0 s
[2026-01-23 00:22:57] 2026-01-23 08:22:23,826 | INFO     | . initial setup = 10 s
[2026-01-23 00:22:57] 2026-01-23 08:22:23,826 | INFO     | . payload setup = 7 s
[2026-01-23 00:22:57] 2026-01-23 08:22:23,826 | INFO     | . stage-in = 0 s
[2026-01-23 00:22:57] 2026-01-23 08:22:23,826 | INFO     | . payload execution = 22 s
[2026-01-23 00:22:57] 2026-01-23 08:22:23,826 | INFO     | . stage-out = 0 s
[2026-01-23 00:22:57] 2026-01-23 08:22:23,826 | INFO     | . log creation = 0 s
[2026-01-23 00:22:57] 2026-01-23 08:22:23,826 | INFO     | ..............................
[2026-01-23 00:22:57] 2026-01-23 08:22:23,826 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-01-23 00:22:57] 2026-01-23 08:22:23,826 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6978165517/pilotlog.txt
[2026-01-23 00:22:57] 2026-01-23 08:22:23,925 | INFO     | monitor loop #56: job 0:6978165517 is in state 'failed'
[2026-01-23 00:22:57] 2026-01-23 08:22:23,925 | INFO     | will abort job monitoring soon since job state=failed (job is still in queue)
[2026-01-23 00:22:57] 2026-01-23 08:22:23,974 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2026-01-23 00:22:57] - Log from pilotlog.txt -
[2026-01-23 00:22:57] 2026-01-23 08:22:23,825 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-23 00:22:57] 2026-01-23 08:22:23,825 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-23 00:22:57] 2026-01-23 08:22:23,825 | WARNING  | found no stored workdir sizes
[2026-01-23 00:22:57] 2026-01-23 08:22:23,825 | INFO     | will not add max space = 0 B to job metrics
[2026-01-23 00:22:57] 2026-01-23 08:22:23,825 | WARNING  | wrong length of table data, x=[1769156406.0], y=[1425.0] (must be same and length>=4)
[2026-01-23 00:22:57] 2026-01-23 08:22:23,826 | INFO     | could have reported an average CPU frequency of 2739 MHz (4 samples)
[2026-01-23 00:22:57] 2026-01-23 08:22:23,826 | INFO     | ..............................
[2026-01-23 00:22:57] 2026-01-23 08:22:23,826 | INFO     | . Timing measurements:
[2026-01-23 00:22:57] 2026-01-23 08:22:23,826 | INFO     | . get job = 0 s
[2026-01-23 00:22:57] 2026-01-23 08:22:23,826 | INFO     | . initial setup = 10 s
[2026-01-23 00:22:57] 2026-01-23 08:22:23,826 | INFO     | . payload setup = 7 s
[2026-01-23 00:22:57] 2026-01-23 08:22:23,826 | INFO     | . stage-in = 0 s
[2026-01-23 00:22:57] 2026-01-23 08:22:23,826 | INFO     | . payload execution = 22 s
[2026-01-23 00:22:57] 2026-01-23 08:22:23,826 | INFO     | . stage-out = 0 s
[2026-01-23 00:22:57] 2026-01-23 08:22:23,826 | INFO     | . log creation = 0 s
[2026-01-23 00:22:57] 2026-01-23 08:22:23,826 | INFO     | ..............................
[2026-01-23 00:22:57] 2026-01-23 08:22:23,826 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-01-23 00:22:57] 2026-01-23 08:22:23,826 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6978165517/pilotlog.txt
[2026-01-23 00:22:57] 2026-01-23 08:22:23,925 | INFO     | monitor loop #56: job 0:6978165517 is in state 'failed'
[2026-01-23 00:22:57] 2026-01-23 08:22:23,925 | INFO     | will abort job monitoring soon since job state=failed (job is still in queue)
[2026-01-23 00:22:57] 2026-01-23 08:22:23,974 | WARNING  | 
[2026-01-23 00:22:57] [begin log extracts]
[2026-01-23 00:22:57] - Log from pilotlog.txt -
[2026-01-23 00:22:57] 2026-01-23 08:22:23,825 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-23 00:22:57] 2026-01-23 08:22:23,825 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-23 00:22:57] 2026-01-23 08:22:23,825 | WARNING  | found no stored workdir sizes
[2026-01-23 00:22:57] 2026-01-23 08:22:23,825 | INFO     | will not add max space = 0 B to job metrics
[2026-01-23 00:22:57] 2026-01-23 08:22:23,825 | WARNING  | wrong length of table data, x=[1769156406.0], y=[1425.0] (must be same and length>=4)
[2026-01-23 00:22:57] 2026-01-23 08:22:23,826 | INFO     | could have reported an average CPU frequency of 2739 MHz (4 samples)
[2026-01-23 00:22:57] 2026-01-23 08:22:23,826 | INFO     | ..............................
[2026-01-23 00:22:57] 2026-01-23 08:22:23,826 | INFO     | . Timing measurements:
[2026-01-23 00:22:57] 2026-01-23 08:22:23,826 | INFO     | . get job = 0 s
[2026-01-23 00:22:57] 2026-01-23 08:22:23,826 | INFO     | . initial setup = 10 s
[2026-01-23 00:22:57] 2026-01-23 08:22:23,826 | INFO     | . payload setup = 7 s
[2026-01-23 00:22:57] 2026-01-23 08:22:23,826 | INFO     | . stage-in = 0 s
[2026-01-23 00:22:57] 2026-01-23 08:22:23,826 | INFO     | . payload execution = 22 s
[2026-01-23 00:22:57] 2026-01-23 08:22:23,826 | INFO     | . stage-out = 0 s
[2026-01-23 00:22:57] 2026-01-23 08:22:23,826 | INFO     | . log creation = 0 s
[2026-01-23 00:22:57] 2026-01-23 08:22:23,826 | INFO     | ..............................
[2026-01-23 00:22:57] 2026-01-23 08:22:23,826 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2026-01-23 00:22:57] 2026-01-23 08:22:23,826 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6978165517/pilotlog.txt
[2026-01-23 00:22:57] 2026-01-23 08:22:23,925 | INFO     | monitor loop #56: job 0:6978165517 is in state 'failed'
[2026-01-23 00:22:57] 2026-01-23 08:22:23,925 | INFO     | will abort job monitoring soon since job state=failed (job is still in queue)
[2026-01-23 00:22:57] [end log extracts]
[2026-01-23 00:22:57] 2026-01-23 08:22:23,975 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2026-01-23 00:22:57] 2026-01-23 08:22:23,975 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2026-01-23 00:22:57] 2026-01-23 08:22:24,101 | INFO     | 
[2026-01-23 00:22:57] 2026-01-23 08:22:24,101 | INFO     | job summary report
[2026-01-23 00:22:57] 2026-01-23 08:22:24,101 | INFO     | --------------------------------------------------
[2026-01-23 00:22:57] 2026-01-23 08:22:24,101 | INFO     | PanDA job id: 6978165517
[2026-01-23 00:22:57] 2026-01-23 08:22:24,101 | INFO     | task id: 48310670
[2026-01-23 00:22:57] 2026-01-23 08:22:24,101 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2026-01-23 00:20:17,439 CRITICAL Transform executor raised TransformValidationExceptio
[2026-01-23 00:22:57] 2026-01-23 08:22:24,102 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-23 00:22:57] 2026-01-23 08:22:24,102 | INFO     | pilot state: failed 
[2026-01-23 00:22:57] 2026-01-23 08:22:24,102 | INFO     | transexitcode: 65
[2026-01-23 00:22:57] 2026-01-23 08:22:24,102 | INFO     | exeerrorcode: 65
[2026-01-23 00:22:57] 2026-01-23 08:22:24,102 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2026-01-23 00:22:57] 2026-01-23 08:22:24,102 | INFO     | exitcode: 65
[2026-01-23 00:22:57] 2026-01-23 08:22:24,102 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2026-01-23 00:22:57] 2026-01-23 08:22:24,102 | INFO     | cpuconsumptiontime: 12 s
[2026-01-23 00:22:57] 2026-01-23 08:22:24,102 | INFO     | nevents: 0
[2026-01-23 00:22:57] 2026-01-23 08:22:24,102 | INFO     | neventsw: 0
[2026-01-23 00:22:57] 2026-01-23 08:22:24,102 | INFO     | pid: 1040671
[2026-01-23 00:22:57] 2026-01-23 08:22:24,102 | INFO     | pgrp: 1040671
[2026-01-23 00:22:57] 2026-01-23 08:22:24,102 | INFO     | corecount: 12
[2026-01-23 00:22:57] 2026-01-23 08:22:24,102 | INFO     | event service: False
[2026-01-23 00:22:57] 2026-01-23 08:22:24,102 | INFO     | sizes: {0: 2284240, 11: 2284240, 33: 2307631, 34: 2307635, 35: 2311955, 36: 2311983, 152: 2312277}
[2026-01-23 00:22:57] 2026-01-23 08:22:24,102 | INFO     | --------------------------------------------------
[2026-01-23 00:22:57] 2026-01-23 08:22:24,102 | INFO     | 
[2026-01-23 00:22:57] 2026-01-23 08:22:24,102 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2026-01-23 00:22:57] 2026-01-23 08:22:24,386 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-23 00:22:57] 2026-01-23 08:22:24,386 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-23 00:22:57] 2026-01-23 08:22:24,386 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-23 00:22:57] 2026-01-23 08:22:24,387 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-23 00:22:57] 2026-01-23 08:22:24,387 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-23 00:22:57] 2026-01-23 08:22:24,387 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-23 00:22:57] 2026-01-23 08:22:24,387 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-23 00:22:57] 2026-01-23 08:22:24,387 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-23 00:22:57] 2026-01-23 08:22:24,387 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-23 00:22:57] 2026-01-23 08:22:24,387 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-23 00:22:57] 2026-01-23 08:22:24,387 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-23 00:22:57] 2026-01-23 08:22:24,387 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-23 00:22:57] 2026-01-23 08:22:24,387 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-23 00:22:57] 2026-01-23 08:22:24,387 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-23 00:22:57] 2026-01-23 08:22:24,387 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-23 00:22:57] 2026-01-23 08:22:24,387 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-23 00:22:57] 2026-01-23 08:22:24,387 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-23 00:22:57] 2026-01-23 08:22:24,387 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-23 00:22:57] 2026-01-23 08:22:24,387 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-23 00:22:57] 2026-01-23 08:22:24,387 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-23 00:22:57] 2026-01-23 08:22:24,388 | INFO     | job 6978165517 has completed (purged errors)
[2026-01-23 00:22:57] 2026-01-23 08:22:24,388 | INFO     | overall cleanup function is called
[2026-01-23 00:22:57] 2026-01-23 08:22:25,394 | INFO     | --- collectZombieJob: --- 10, [1040671]
[2026-01-23 00:22:57] 2026-01-23 08:22:25,394 | INFO     | zombie collector waiting for pid 1040671
[2026-01-23 00:22:57] 2026-01-23 08:22:25,394 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-23 00:22:57] 2026-01-23 08:22:25,394 | INFO     | collected zombie processes
[2026-01-23 00:22:57] 2026-01-23 08:22:25,394 | INFO     | will attempt to kill all subprocesses of pid=1040671
[2026-01-23 00:22:57] 2026-01-23 08:22:25,550 | INFO     | process IDs to be killed: [1040671] (in reverse order)
[2026-01-23 00:22:57] 2026-01-23 08:22:25,615 | WARNING  | found no corresponding commands to process id(s)
[2026-01-23 00:22:57] 2026-01-23 08:22:25,616 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-23 00:22:57] 2026-01-23 08:22:25,622 | INFO     | did not find any defunct processes belonging to 1040671
[2026-01-23 00:22:57] 2026-01-23 08:22:25,628 | INFO     | did not find any defunct processes belonging to 1040671
[2026-01-23 00:22:57] 2026-01-23 08:22:25,628 | INFO     | ready for new job
[2026-01-23 00:22:57] 2026-01-23 08:22:25,628 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-23 00:22:57] 2026-01-23 08:22:25,630 | INFO     | **************************************
[2026-01-23 00:22:57] 2026-01-23 08:22:25,630 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-23 00:22:57] 2026-01-23 08:22:25,630 | INFO     | **************************************
[2026-01-23 00:22:57] 2026-01-23 08:22:25,630 | INFO     | 
[2026-01-23 00:22:57] 2026-01-23 08:22:25,632 | INFO     | architecture information:
[2026-01-23 00:22:57] 2026-01-23 08:22:25,632 | INFO     | executing command: cat /etc/os-release
[2026-01-23 00:22:57] 2026-01-23 08:22:25,643 | INFO     | cat /etc/os-release:
[2026-01-23 00:22:57] NAME="CentOS Linux"
[2026-01-23 00:22:57] VERSION="7 (Core)"
[2026-01-23 00:22:57] ID="centos"
[2026-01-23 00:22:57] ID_LIKE="rhel fedora"
[2026-01-23 00:22:57] VERSION_ID="7"
[2026-01-23 00:22:57] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-23 00:22:57] ANSI_COLOR="0;31"
[2026-01-23 00:22:57] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-23 00:22:57] HOME_URL="https://www.centos.org/"
[2026-01-23 00:22:57] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-23 00:22:57] 
[2026-01-23 00:22:57] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-23 00:22:57] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-23 00:22:57] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-23 00:22:57] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-23 00:22:57] 
[2026-01-23 00:22:57] 2026-01-23 08:22:25,643 | INFO     | **************************************
[2026-01-23 00:22:57] 2026-01-23 08:22:26,148 | INFO     | executing command: df -mP /home/boinc/slots/0
[2026-01-23 00:22:57] 2026-01-23 08:22:26,202 | INFO     | sufficient remaining disk space (1998182154240 B)
[2026-01-23 00:22:57] 2026-01-23 08:22:26,202 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-23 00:22:57] 2026-01-23 08:22:26,202 | INFO     | current server update state: UPDATING_FINAL
[2026-01-23 00:22:57] 2026-01-23 08:22:26,207 | INFO     | update_server=False
[2026-01-23 00:22:57] 2026-01-23 08:22:26,207 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-23 00:22:57] 2026-01-23 08:22:26,207 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-23 00:22:57] 2026-01-23 08:22:26,428 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-23 00:22:57] 2026-01-23 08:22:26,428 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-23 00:22:57] 2026-01-23 08:22:26,428 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-23 00:22:57] 2026-01-23 08:22:26,428 | INFO     | will abort loop
[2026-01-23 00:22:57] 2026-01-23 08:22:26,712 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-23 00:22:57] 2026-01-23 08:22:27,223 | INFO     | [job] retrieve thread has finished
[2026-01-23 00:22:57] 2026-01-23 08:22:27,244 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-23 00:22:57] 2026-01-23 08:22:27,263 | INFO     | all data control threads have been joined
[2026-01-23 00:22:57] 2026-01-23 08:22:27,307 | INFO     | [payload] failed_post thread has finished
[2026-01-23 00:22:57] 2026-01-23 08:22:27,381 | INFO     | all payload control threads have been joined
[2026-01-23 00:22:57] 2026-01-23 08:22:27,433 | INFO     | [job] job monitor thread has finished
[2026-01-23 00:22:57] 2026-01-23 08:22:27,434 | INFO     | [job] validate thread has finished
[2026-01-23 00:22:57] 2026-01-23 08:22:27,474 | INFO     | all job control threads have been joined
[2026-01-23 00:22:57] 2026-01-23 08:22:27,536 | INFO     | [job] create_data_payload thread has finished
[2026-01-23 00:22:57] 2026-01-23 08:22:27,754 | INFO     | [payload] validate_pre thread has finished
[2026-01-23 00:22:57] 2026-01-23 08:22:28,043 | INFO     | [data] copytool_in thread has finished
[2026-01-23 00:22:57] 2026-01-23 08:22:28,214 | INFO     | [data] copytool_out thread has finished
[2026-01-23 00:22:57] 2026-01-23 08:22:28,218 | INFO     | [payload] execute_payloads thread has finished
[2026-01-23 00:22:57] 2026-01-23 08:22:28,269 | INFO     | [data] control thread has finished
[2026-01-23 00:22:57] 2026-01-23 08:22:28,344 | INFO     | [payload] validate_post thread has finished
[2026-01-23 00:22:57] 2026-01-23 08:22:28,387 | INFO     | [payload] control thread has finished
[2026-01-23 00:22:57] 2026-01-23 08:22:28,482 | INFO     | [job] control thread has finished
[2026-01-23 00:22:57] 2026-01-23 08:22:29,120 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-23 00:22:57] 2026-01-23 08:22:30,126 | INFO     | [job] queue monitor thread has finished
[2026-01-23 00:22:57] 2026-01-23 08:22:30,721 | INFO     | [data] queue_monitor thread has finished
[2026-01-23 00:22:57] 2026-01-23 08:22:40,490 | INFO     | [monitor] cgroup control has ended
[2026-01-23 00:22:57] 2026-01-23 08:22:41,345 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140496776382272)>', '<ExcThread(monitor, started 140496456357632)>']
[2026-01-23 00:22:57] 2026-01-23 08:22:46,372 | INFO     | all workflow threads have been joined
[2026-01-23 00:22:57] 2026-01-23 08:22:46,372 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-23 00:22:57] 2026-01-23 08:22:46,372 | INFO     | traces error code: 0
[2026-01-23 00:22:57] 2026-01-23 08:22:46,372 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-23 00:22:57] 2026-01-23 08:22:56,810 | INFO     | PID=1036156 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-23 00:22:57] 2026-01-23 08:22:56,810 | INFO     | .. there are 21 such processes running
[2026-01-23 00:22:57] 2026-01-23 08:22:56,811 | INFO     | found 0 job(s) in 20 queues
[2026-01-23 00:22:57] 2026-01-23 08:22:56,811 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-23 00:22:57] 2026-01-23 08:22:56,811 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-23 00:22:57] 2026-01-23 08:22:56,811 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-23 00:22:57] 2026-01-23 08:22:56,811 | INFO     | [monitor] control thread has ended
[2026-01-23 00:22:57] 2026-01-23 08:22:56,920 [wrapper] ==== pilot stdout END ====
[2026-01-23 00:22:57] 2026-01-23 08:22:56,922 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-23 00:22:57] 2026-01-23 08:22:56,925 [wrapper] pilotpid: 1036156
[2026-01-23 00:22:57] 2026-01-23 08:22:56,926 [wrapper] Pilot exit status: 0
[2026-01-23 00:22:57] 2026-01-23 08:22:56,934 [wrapper] pandaids: 6978165517
[2026-01-23 00:22:57] 2026-01-23 08:22:56,971 [wrapper] cleanup supervisor_pilot 1036162 1036157
[2026-01-23 00:22:57] 2026-01-23 08:22:56,973 [wrapper] Test setup, not cleaning
[2026-01-23 00:22:57] 2026-01-23 08:22:56,976 [wrapper] apfmon messages muted
[2026-01-23 00:22:57] 2026-01-23 08:22:56,978 [wrapper] ==== wrapper stdout END ====
[2026-01-23 00:22:57] 2026-01-23 08:22:56,979 [wrapper] ==== wrapper stderr END ====
[2026-01-23 00:22:57]  *** Error codes and diagnostics ***
[2026-01-23 00:22:57]     "exeErrorCode": 65,
[2026-01-23 00:22:57]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2026-01-23 00:22:57]     "pilotErrorCode": 1305,
[2026-01-23 00:22:57]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2026-01-23 00:22:57]  *** Listing of results directory ***
[2026-01-23 00:22:57] total 491248
[2026-01-23 00:22:57] -rw-r--r--. 1 boinc boinc    584422 Jan 22 19:26 pilot3.tar.gz
[2026-01-23 00:22:57] -rwx------. 1 boinc boinc     36322 Jan 22 19:28 runpilot2-wrapper.sh
[2026-01-23 00:22:57] -rw-r--r--. 1 boinc boinc      5111 Jan 22 19:30 queuedata.json
[2026-01-23 00:22:57] -rw-r--r--. 1 boinc boinc       100 Jan 23 00:19 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-23 00:22:57] -rwxr-xr-x. 1 boinc boinc      7986 Jan 23 00:19 run_atlas
[2026-01-23 00:22:57] -rw-r--r--. 1 boinc boinc       105 Jan 23 00:19 job.xml
[2026-01-23 00:22:57] -rw-r--r--. 1 boinc boinc      6595 Jan 23 00:19 init_data.xml
[2026-01-23 00:22:57] -rw-r--r--. 2 boinc boinc 498899610 Jan 23 00:19 EVNT.48310665._000066.pool.root.1
[2026-01-23 00:22:57] -rw-r--r--. 2 boinc boinc     15845 Jan 23 00:19 start_atlas.sh
[2026-01-23 00:22:57] drwxrwx--x. 2 boinc boinc      4096 Jan 23 00:19 shared
[2026-01-23 00:22:57] -rw-r--r--. 2 boinc boinc    597757 Jan 23 00:19 input.tar.gz
[2026-01-23 00:22:57] -rw-r--r--. 1 boinc boinc         0 Jan 23 00:19 boinc_lockfile
[2026-01-23 00:22:57] -rw-r--r--. 1 boinc boinc      2524 Jan 23 00:19 pandaJob.out
[2026-01-23 00:22:57] -rw-------. 1 boinc boinc   1003905 Jan 23 00:19 agis_schedconf.cvmfs.json
[2026-01-23 00:22:57] -rw-------. 1 boinc boinc   1516246 Jan 23 00:19 agis_ddmendpoints.agis.ALL.json
[2026-01-23 00:22:57] -rw-------. 1 boinc boinc       445 Jan 23 00:19 workernode_map.json
[2026-01-23 00:22:57] drwx------. 5 boinc boinc      4096 Jan 23 00:19 pilot3
[2026-01-23 00:22:57] -rw-r--r--. 1 boinc boinc       524 Jan 23 00:20 boinc_task_state.xml
[2026-01-23 00:22:57] -rw-------. 1 boinc boinc       972 Jan 23 00:20 memory_monitor_summary.json
[2026-01-23 00:22:57] -rw-------. 1 boinc boinc     20683 Jan 23 00:20 log.48310670._003278.job.log.tgz.1
[2026-01-23 00:22:57] -rw-------. 1 boinc boinc      7026 Jan 23 00:22 heartbeat.json
[2026-01-23 00:22:57] -rw-r--r--. 1 boinc boinc      8192 Jan 23 00:22 boinc_mmap_file
[2026-01-23 00:22:57] -rw-r--r--. 1 boinc boinc        22 Jan 23 00:22 wrapper_checkpoint.txt
[2026-01-23 00:22:57] -rw-------. 1 boinc boinc        95 Jan 23 00:22 pilot_heartbeat.json
[2026-01-23 00:22:57] -rw-------. 1 boinc boinc       823 Jan 23 00:22 pilotlog.txt
[2026-01-23 00:22:57] -rw-------. 1 boinc boinc     82091 Jan 23 00:22 log.48310670._003278.job.log.1
[2026-01-23 00:22:57] -rw-------. 1 boinc boinc       188 Jan 23 00:22 output.list
[2026-01-23 00:22:57] -rw-r--r--. 1 boinc boinc       620 Jan 23 00:22 runtime_log
[2026-01-23 00:22:57] -rw-------. 1 boinc boinc    122880 Jan 23 00:22 result.tar.gz
[2026-01-23 00:22:57] -rw-------. 1 boinc boinc       644 Jan 23 00:22 wiQKDm91M38n9Rq4apOajLDm4fhM0noT9bVo0NGKDmeGvKDmrXa8Em.diag
[2026-01-23 00:22:57] -rw-r--r--. 1 boinc boinc      8635 Jan 23 00:22 runtime_log.err
[2026-01-23 00:22:57] -rw-r--r--. 1 boinc boinc     21772 Jan 23 00:22 stderr.txt
[2026-01-23 00:22:57] No HITS result produced
[2026-01-23 00:22:57]  *** Contents of shared directory: ***
[2026-01-23 00:22:57] total 487928
[2026-01-23 00:22:57] -rw-r--r--. 2 boinc boinc 498899610 Jan 23 00:19 ATLAS.root_0
[2026-01-23 00:22:57] -rw-r--r--. 2 boinc boinc     15845 Jan 23 00:19 start_atlas.sh
[2026-01-23 00:22:57] -rw-r--r--. 2 boinc boinc    597757 Jan 23 00:19 input.tar.gz
[2026-01-23 00:22:57] -rw-------. 1 boinc boinc    122880 Jan 23 00:22 result.tar.gz
00:22:58 (1032491): run_atlas exited; CPU time 17.341899
00:22:58 (1032491): called boinc_finish(0)

</stderr_txt>
]]>

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