Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
02:51:05 (29424): wrapper (7.7.26015): starting
02:51:05 (29424): wrapper: running run_atlas (--nthreads 12)
[2026-01-23 02:51:05] Arguments: --nthreads 12
[2026-01-23 02:51:05] Threads: 12
[2026-01-23 02:51:05] Checking for CVMFS
[2026-01-23 02:51:06] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-23 02:51:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-23 02:51:06] Running cvmfs_config stat atlas.cern.ch
[2026-01-23 02:51:06] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-23 02:51:06] 2.11.2.0 2981 370878 95092 155427 1 52 12786782 20275200 1 130560 1 157500510 99.952 21953058 16385 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-23 02:51:06] CVMFS is ok
[2026-01-23 02:51:06] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-23 02:51:06] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-23 02:51:06] Further information can be found at the LHC@home message board.
[2026-01-23 02:51:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-23 02:51:06] Checking for apptainer binary...
[2026-01-23 02:51:06] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-23 02:51:06] Running /usr/bin/apptainer --version
[2026-01-23 02:51:06] apptainer version 1.3.2-1.el7
[2026-01-23 02:51:06] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-23 02:51:07] c-205-30.aglt2.org
[2026-01-23 02:51:07] apptainer works
[2026-01-23 02:51:07] Set ATHENA_PROC_NUMBER=12
[2026-01-23 02:51:07] Set ATHENA_CORE_NUMBER=12
[2026-01-23 02:51:07] Starting ATLAS job with PandaID=6978136080
[2026-01-23 02:51:07] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-23 04:03:40]  *** The last 200 lines of the pilot log: ***
[2026-01-23 04:03:40]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/8c/52/log.48310783._000112.job.log.tgz.1
[2026-01-23 04:03:40]  workdir=None
[2026-01-23 04:03:40] ]
[2026-01-23 04:03:40] 2026-01-23 09:02:32,815 | INFO     | transferring file log.48310783._000112.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6978136080/log.48310783._000112.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-01-23 04:03:40] 2026-01-23 09:02:32,815 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6978136080/log.48310783._000112.job.log.tgz.1 /tmp/boinchome/slots/0/log.48310783._000112.job
[2026-01-23 04:03:40] 2026-01-23 09:02:32,835 | INFO     | adding to output.list: log.48310783._000112.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/8c/52/log.48310783._000112.job.log.tg
[2026-01-23 04:03:40] 2026-01-23 09:02:32,836 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-23 04:03:40] 2026-01-23 09:02:32,837 | INFO     | summary of transferred files:
[2026-01-23 04:03:40] 2026-01-23 09:02:32,837 | INFO     |  -- lfn=log.48310783._000112.job.log.tgz.1, status_code=0, status=transferred
[2026-01-23 04:03:40] 2026-01-23 09:02:32,837 | INFO     | stage-out finished correctly
[2026-01-23 04:03:40] 2026-01-23 09:02:34,492 | INFO     | time since job start (4267s) is within the limit (349056.0s)
[2026-01-23 04:03:40] 2026-01-23 09:02:34,604 | WARNING  | process 5225 can no longer be monitored (due to stat problems) - aborting
[2026-01-23 04:03:40] 2026-01-23 09:02:34,604 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6978136080/memory_monitor_summary.json (trf name=prmon)
[2026-01-23 04:03:40] 2026-01-23 09:02:34,605 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6978136080/memory_monitor_summary.json (trf name=prmon)
[2026-01-23 04:03:40] 2026-01-23 09:02:34,605 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2026-01-23 04:03:40] 2026-01-23 09:02:34,605 | WARNING  | maxPSS not found in memory monitor output
[2026-01-23 04:03:40] 2026-01-23 09:02:34,606 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 4157153 B
[2026-01-23 04:03:40] 2026-01-23 09:02:34,606 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 15831 B
[2026-01-23 04:03:40] 2026-01-23 09:02:34,606 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-23 04:03:40] 2026-01-23 09:02:34,622 | INFO     | sufficient remaining disk space (28712108032 B)
[2026-01-23 04:03:40] 2026-01-23 09:02:34,623 | INFO     | work directory size check will use 5033164800 B as a max limit (20% grace limit added, divider=1)
[2026-01-23 04:03:40] 2026-01-23 09:02:34,624 | INFO     | size of work directory /tmp/boinchome/slots/0/PanDA_Pilot-6978136080: 4454195 B (within 5033164800 B limit)
[2026-01-23 04:03:40] 2026-01-23 09:02:34,624 | INFO     | pfn file=/tmp/boinchome/slots/0/PanDA_Pilot-6978136080/HITS.48310783._000112.pool.root.1 does not exist (skip from workdir size calculation)
[2026-01-23 04:03:40] 2026-01-23 09:02:34,624 | INFO     | total size of present files: 0 B (workdir size: 4454195 B)
[2026-01-23 04:03:40] 2026-01-23 09:02:34,624 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/0/PanDA_Pilot-6978136080/HITS.48310783._000112.pool.root.1 since it does not exist
[2026-01-23 04:03:40] 2026-01-23 09:02:34,713 | INFO     | number of running child processes to parent process 5225: 1
[2026-01-23 04:03:40] 2026-01-23 09:02:34,713 | INFO     | maximum number of monitored processes: 6
[2026-01-23 04:03:40] 2026-01-23 09:02:35,889 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-23 04:03:40] 2026-01-23 09:02:36,497 | INFO     | time since job start (4269s) is within the limit (349056.0s)
[2026-01-23 04:03:40] 2026-01-23 09:02:37,217 | INFO     | monitor loop #324: job 0:6978136080 is in state 'finished'
[2026-01-23 04:03:40] 2026-01-23 09:02:37,217 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-23 04:03:40] 2026-01-23 09:02:37,365 | INFO     | job 6978136080 has state=finished
[2026-01-23 04:03:40] 2026-01-23 09:02:37,365 | INFO     | preparing for final server update for job 6978136080 in state='finished'
[2026-01-23 04:03:40] 2026-01-23 09:02:37,365 | INFO     | reading metadata from: /tmp/boinchome/slots/0/PanDA_Pilot-6978136080/jobReport.json
[2026-01-23 04:03:40] 2026-01-23 09:02:37,368 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-01-23 04:03:40] 2026-01-23 09:02:37,369 | INFO     | this job has now completed (state=finished)
[2026-01-23 04:03:40] 2026-01-23 09:02:37,369 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-23 04:03:40] 2026-01-23 09:02:37,369 | INFO     | log transfer has been attempted: DONE
[2026-01-23 04:03:40] 2026-01-23 09:02:37,369 | INFO     | job 6978136080 has finished - writing final server update
[2026-01-23 04:03:40] 2026-01-23 09:02:37,369 | INFO     | total number of processed events: 400 (read)
[2026-01-23 04:03:40] 2026-01-23 09:02:37,371 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6978136080/memory_monitor_summary.json (trf name=prmon)
[2026-01-23 04:03:40] 2026-01-23 09:02:37,372 | INFO     | extracted standard info from prmon json
[2026-01-23 04:03:40] 2026-01-23 09:02:37,372 | INFO     | extracted standard memory fields from prmon json
[2026-01-23 04:03:40] 2026-01-23 09:02:37,372 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-23 04:03:40] 2026-01-23 09:02:37,372 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-23 04:03:40] 2026-01-23 09:02:37,372 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-23 04:03:40] 2026-01-23 09:02:37,374 | INFO     | fitting pss+swap vs Time
[2026-01-23 04:03:40] 2026-01-23 09:02:37,374 | INFO     | sum of square deviations: 77515872.0
[2026-01-23 04:03:40] 2026-01-23 09:02:37,374 | INFO     | sum of deviations: -5315036872.0
[2026-01-23 04:03:40] 2026-01-23 09:02:37,374 | INFO     | mean x: 1769156907.0
[2026-01-23 04:03:40] 2026-01-23 09:02:37,374 | INFO     | mean y: 2750933.9206349207
[2026-01-23 04:03:40] 2026-01-23 09:02:37,374 | INFO     | intersect: 121308671262.83696
[2026-01-23 04:03:40] 2026-01-23 09:02:37,375 | INFO     | chi2: 0.05446208686257669
[2026-01-23 04:03:40] 2026-01-23 09:02:37,375 | INFO     | current memory leak: -68.57 B/s (using 63 data points, chi2=0.05)
[2026-01-23 04:03:40] 2026-01-23 09:02:37,375 | INFO     | could have reported an average CPU frequency of 1729 MHz (6 samples)
[2026-01-23 04:03:40] 2026-01-23 09:02:37,375 | INFO     | ..............................
[2026-01-23 04:03:40] 2026-01-23 09:02:37,375 | INFO     | . Timing measurements:
[2026-01-23 04:03:40] 2026-01-23 09:02:37,375 | INFO     | . get job = 0 s
[2026-01-23 04:03:40] 2026-01-23 09:02:37,376 | INFO     | . initial setup = 7 s
[2026-01-23 04:03:40] 2026-01-23 09:02:37,376 | INFO     | . payload setup = 6 s
[2026-01-23 04:03:40] 2026-01-23 09:02:37,376 | INFO     | . stage-in = 0 s
[2026-01-23 04:03:40] 2026-01-23 09:02:37,376 | INFO     | . payload execution = 4242 s
[2026-01-23 04:03:40] 2026-01-23 09:02:37,376 | INFO     | . stage-out = 0 s
[2026-01-23 04:03:40] 2026-01-23 09:02:37,376 | INFO     | . log creation = 0 s
[2026-01-23 04:03:40] 2026-01-23 09:02:37,376 | INFO     | ..............................
[2026-01-23 04:03:40] 2026-01-23 09:02:37,473 | INFO     | 
[2026-01-23 04:03:40] 2026-01-23 09:02:37,473 | INFO     | job summary report
[2026-01-23 04:03:40] 2026-01-23 09:02:37,473 | INFO     | --------------------------------------------------
[2026-01-23 04:03:40] 2026-01-23 09:02:37,473 | INFO     | PanDA job id: 6978136080
[2026-01-23 04:03:40] 2026-01-23 09:02:37,473 | INFO     | task id: 48310783
[2026-01-23 04:03:40] 2026-01-23 09:02:37,474 | INFO     | errors: (none)
[2026-01-23 04:03:40] 2026-01-23 09:02:37,474 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-23 04:03:40] 2026-01-23 09:02:37,474 | INFO     | pilot state: finished 
[2026-01-23 04:03:40] 2026-01-23 09:02:37,474 | INFO     | transexitcode: 0
[2026-01-23 04:03:40] 2026-01-23 09:02:37,474 | INFO     | exeerrorcode: 0
[2026-01-23 04:03:40] 2026-01-23 09:02:37,474 | INFO     | exeerrordiag: 
[2026-01-23 04:03:40] 2026-01-23 09:02:37,475 | INFO     | exitcode: 0
[2026-01-23 04:03:40] 2026-01-23 09:02:37,475 | INFO     | exitmsg: OK
[2026-01-23 04:03:40] 2026-01-23 09:02:37,475 | INFO     | cpuconsumptiontime: 46173 s
[2026-01-23 04:03:40] 2026-01-23 09:02:37,475 | INFO     | nevents: 400
[2026-01-23 04:03:40] 2026-01-23 09:02:37,475 | INFO     | neventsw: 0
[2026-01-23 04:03:40] 2026-01-23 09:02:37,475 | INFO     | pid: 5225
[2026-01-23 04:03:40] 2026-01-23 09:02:37,476 | INFO     | pgrp: 5225
[2026-01-23 04:03:40] 2026-01-23 09:02:37,476 | INFO     | corecount: 12
[2026-01-23 04:03:40] 2026-01-23 09:02:37,476 | INFO     | event service: False
[2026-01-23 04:03:40] 2026-01-23 09:02:37,476 | INFO     | sizes: {0: 2283137, 1: 2284255, 12: 2284255, 4252: 2310139, 4254: 2319137, 4257: 2319317, 4259: 2319639}
[2026-01-23 04:03:40] 2026-01-23 09:02:37,476 | INFO     | --------------------------------------------------
[2026-01-23 04:03:40] 2026-01-23 09:02:37,476 | INFO     | 
[2026-01-23 04:03:40] 2026-01-23 09:02:37,477 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-23 04:03:40] 2026-01-23 09:02:37,501 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-23 04:03:40] 2026-01-23 09:02:37,501 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-23 04:03:40] 2026-01-23 09:02:37,501 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-23 04:03:40] 2026-01-23 09:02:37,502 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-23 04:03:40] 2026-01-23 09:02:37,502 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-23 04:03:40] 2026-01-23 09:02:37,502 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-23 04:03:40] 2026-01-23 09:02:37,502 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-23 04:03:40] 2026-01-23 09:02:37,503 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-23 04:03:40] 2026-01-23 09:02:37,503 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-23 04:03:40] 2026-01-23 09:02:37,503 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-23 04:03:40] 2026-01-23 09:02:37,503 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-23 04:03:40] 2026-01-23 09:02:37,503 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-23 04:03:40] 2026-01-23 09:02:37,503 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-23 04:03:40] 2026-01-23 09:02:37,504 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-23 04:03:40] 2026-01-23 09:02:37,504 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-23 04:03:40] 2026-01-23 09:02:37,504 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-23 04:03:40] 2026-01-23 09:02:37,504 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-23 04:03:40] 2026-01-23 09:02:37,504 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-23 04:03:40] 2026-01-23 09:02:37,504 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-23 04:03:40] 2026-01-23 09:02:37,505 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-23 04:03:40] 2026-01-23 09:02:37,505 | INFO     | job 6978136080 has completed (purged errors)
[2026-01-23 04:03:40] 2026-01-23 09:02:37,505 | INFO     | overall cleanup function is called
[2026-01-23 04:03:40] 2026-01-23 09:02:38,513 | INFO     | --- collectZombieJob: --- 10, [5225]
[2026-01-23 04:03:40] 2026-01-23 09:02:38,514 | INFO     | zombie collector waiting for pid 5225
[2026-01-23 04:03:40] 2026-01-23 09:02:38,514 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-23 04:03:40] 2026-01-23 09:02:38,514 | INFO     | collected zombie processes
[2026-01-23 04:03:40] 2026-01-23 09:02:38,514 | INFO     | will attempt to kill all subprocesses of pid=5225
[2026-01-23 04:03:40] 2026-01-23 09:02:38,605 | INFO     | process IDs to be killed: [5225] (in reverse order)
[2026-01-23 04:03:40] 2026-01-23 09:02:38,655 | WARNING  | found no corresponding commands to process id(s)
[2026-01-23 04:03:40] 2026-01-23 09:02:38,655 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-23 04:03:40] 2026-01-23 09:02:38,659 | INFO     | did not find any defunct processes belonging to 5225
[2026-01-23 04:03:40] 2026-01-23 09:02:38,661 | INFO     | did not find any defunct processes belonging to 5225
[2026-01-23 04:03:40] 2026-01-23 09:02:38,661 | INFO     | ready for new job
[2026-01-23 04:03:40] 2026-01-23 09:02:38,662 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-23 04:03:40] 2026-01-23 09:02:38,663 | INFO     | **************************************
[2026-01-23 04:03:40] 2026-01-23 09:02:38,663 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-23 04:03:40] 2026-01-23 09:02:38,663 | INFO     | **************************************
[2026-01-23 04:03:40] 2026-01-23 09:02:38,663 | INFO     | 
[2026-01-23 04:03:40] 2026-01-23 09:02:38,663 | INFO     | architecture information:
[2026-01-23 04:03:40] 2026-01-23 09:02:38,664 | INFO     | executing command: cat /etc/os-release
[2026-01-23 04:03:40] 2026-01-23 09:02:38,678 | INFO     | cat /etc/os-release:
[2026-01-23 04:03:40] NAME="CentOS Linux"
[2026-01-23 04:03:40] VERSION="7 (Core)"
[2026-01-23 04:03:40] ID="centos"
[2026-01-23 04:03:40] ID_LIKE="rhel fedora"
[2026-01-23 04:03:40] VERSION_ID="7"
[2026-01-23 04:03:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-23 04:03:40] ANSI_COLOR="0;31"
[2026-01-23 04:03:40] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-23 04:03:40] HOME_URL="https://www.centos.org/"
[2026-01-23 04:03:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-23 04:03:40] 
[2026-01-23 04:03:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-23 04:03:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-23 04:03:40] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-23 04:03:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-23 04:03:40] 
[2026-01-23 04:03:40] 2026-01-23 09:02:38,679 | INFO     | **************************************
[2026-01-23 04:03:40] 2026-01-23 09:02:39,182 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-23 04:03:40] 2026-01-23 09:02:39,198 | INFO     | sufficient remaining disk space (28717350912 B)
[2026-01-23 04:03:40] 2026-01-23 09:02:39,198 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-23 04:03:40] 2026-01-23 09:02:39,198 | INFO     | current server update state: UPDATING_FINAL
[2026-01-23 04:03:40] 2026-01-23 09:02:39,199 | INFO     | update_server=False
[2026-01-23 04:03:40] 2026-01-23 09:02:39,199 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-23 04:03:40] 2026-01-23 09:02:39,199 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-23 04:03:40] 2026-01-23 09:02:39,199 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-23 04:03:40] 2026-01-23 09:02:39,200 | INFO     | aborting loop
[2026-01-23 04:03:40] 2026-01-23 09:02:39,200 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-23 04:03:40] 2026-01-23 09:02:39,385 | INFO     | all job control threads have been joined
[2026-01-23 04:03:40] 2026-01-23 09:02:40,203 | INFO     | [job] retrieve thread has finished
[2026-01-23 04:03:40] 2026-01-23 09:02:40,206 | INFO     | [job] job monitor thread has finished
[2026-01-23 04:03:40] 2026-01-23 09:02:40,206 | INFO     | [job] queue monitor thread has finished
[2026-01-23 04:03:40] 2026-01-23 09:02:40,208 | INFO     | all data control threads have been joined
[2026-01-23 04:03:40] 2026-01-23 09:02:40,237 | INFO     | [job] create_data_payload thread has finished
[2026-01-23 04:03:40] 2026-01-23 09:02:40,252 | INFO     | [payload] failed_post thread has finished
[2026-01-23 04:03:40] 2026-01-23 09:02:40,377 | INFO     | [payload] validate_pre thread has finished
[2026-01-23 04:03:40] 2026-01-23 09:02:40,391 | INFO     | [job] control thread has finished
[2026-01-23 04:03:40] 2026-01-23 09:02:40,403 | INFO     | all payload control threads have been joined
[2026-01-23 04:03:40] 2026-01-23 09:02:40,648 | INFO     | [data] copytool_in thread has finished
[2026-01-23 04:03:40] 2026-01-23 09:02:40,981 | INFO     | [payload] execute_payloads thread has finished
[2026-01-23 04:03:40] 2026-01-23 09:02:41,205 | INFO     | [data] copytool_out thread has finished
[2026-01-23 04:03:40] 2026-01-23 09:02:41,209 | INFO     | [data] control thread has finished
[2026-01-23 04:03:40] 2026-01-23 09:02:41,408 | INFO     | [payload] control thread has finished
[2026-01-23 04:03:40] 2026-01-23 09:02:41,547 | INFO     | [job] validate thread has finished
[2026-01-23 04:03:40] 2026-01-23 09:02:41,647 | INFO     | [payload] validate_post thread has finished
[2026-01-23 04:03:40] 2026-01-23 09:02:41,978 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-23 04:03:40] 2026-01-23 09:02:45,984 | INFO     | [data] queue_monitor thread has finished
[2026-01-23 04:03:40] 2026-01-23 09:02:49,572 | INFO     | job.realtimelogging is not enabled
[2026-01-23 04:03:40] 2026-01-23 09:02:50,577 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-23 04:03:40] 2026-01-23 09:03:09,701 | INFO     | PID=667 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j
[2026-01-23 04:03:40] 2026-01-23 09:03:09,702 | INFO     | found 0 job(s) in 20 queues
[2026-01-23 04:03:40] 2026-01-23 09:03:09,714 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-23 04:03:40] 2026-01-23 09:03:09,714 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-23 04:03:40] 2026-01-23 09:03:33,602 | INFO     | [monitor] cgroup control has ended
[2026-01-23 04:03:40] 2026-01-23 09:03:35,557 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140527952586560)>', '<ExcThread(monitor, started 140526825236224)>']
[2026-01-23 04:03:40] 2026-01-23 09:03:35,841 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-23 04:03:40] 2026-01-23 09:03:35,841 | INFO     | [monitor] control thread has ended
[2026-01-23 04:03:40] 2026-01-23 09:03:40,562 | INFO     | all workflow threads have been joined
[2026-01-23 04:03:40] 2026-01-23 09:03:40,562 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-23 04:03:40] 2026-01-23 09:03:40,562 | INFO     | traces error code: 0
[2026-01-23 04:03:40] 2026-01-23 09:03:40,563 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-23 04:03:40] 2026-01-23 09:03:40,654 [wrapper] ==== pilot stdout END ====
[2026-01-23 04:03:40] 2026-01-23 09:03:40,658 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-23 04:03:40] 2026-01-23 09:03:40,661 [wrapper] pilotpid: 667
[2026-01-23 04:03:40] 2026-01-23 09:03:40,665 [wrapper] Pilot exit status: 0
[2026-01-23 04:03:40] 2026-01-23 09:03:40,681 [wrapper] pandaids: 6978136080
[2026-01-23 04:03:40] 2026-01-23 09:03:40,726 [wrapper] cleanup supervisor_pilot 23706 668
[2026-01-23 04:03:40] 2026-01-23 09:03:40,730 [wrapper] Test setup, not cleaning
[2026-01-23 04:03:40] 2026-01-23 09:03:40,734 [wrapper] apfmon messages muted
[2026-01-23 04:03:40] 2026-01-23 09:03:40,737 [wrapper] ==== wrapper stdout END ====
[2026-01-23 04:03:40] 2026-01-23 09:03:40,741 [wrapper] ==== wrapper stderr END ====
[2026-01-23 04:03:40]  *** Error codes and diagnostics ***
[2026-01-23 04:03:40]     "exeErrorCode": 0,
[2026-01-23 04:03:40]     "exeErrorDiag": "",
[2026-01-23 04:03:40]     "pilotErrorCode": 0,
[2026-01-23 04:03:40]     "pilotErrorDiag": "",
[2026-01-23 04:03:40]  *** Listing of results directory ***
[2026-01-23 04:03:40] total 717432
[2026-01-23 04:03:40] -rw-r--r-- 1 boincer umatlas    584422 Jan 22 22:26 pilot3.tar.gz
[2026-01-23 04:03:40] -rwx------ 1 boincer umatlas     36322 Jan 22 22:26 runpilot2-wrapper.sh
[2026-01-23 04:03:40] -rw-r--r-- 1 boincer umatlas      5111 Jan 22 22:27 queuedata.json
[2026-01-23 04:03:40] -rw-r--r-- 1 boincer umatlas       100 Jan 23 02:51 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-23 04:03:40] -rwxr-xr-x 1 boincer umatlas      7986 Jan 23 02:51 run_atlas
[2026-01-23 04:03:40] -rw-r--r-- 1 boincer umatlas       105 Jan 23 02:51 job.xml
[2026-01-23 04:03:40] -rw-r--r-- 2 boincer umatlas 532651904 Jan 23 02:51 EVNT.48310779._000003.pool.root.1
[2026-01-23 04:03:40] -rw-r--r-- 2 boincer umatlas     15845 Jan 23 02:51 start_atlas.sh
[2026-01-23 04:03:40] drwxrwx--x 2 boincer umatlas      4096 Jan 23 02:51 shared
[2026-01-23 04:03:40] -rw-r--r-- 2 boincer umatlas    597740 Jan 23 02:51 input.tar.gz
[2026-01-23 04:03:40] -rw-r--r-- 1 boincer umatlas         0 Jan 23 02:51 boinc_lockfile
[2026-01-23 04:03:40] -rw-r--r-- 1 boincer umatlas      2521 Jan 23 02:51 pandaJob.out
[2026-01-23 04:03:40] -rw------- 1 boincer umatlas        57 Jan 23 02:51 setup.sh.local
[2026-01-23 04:03:40] -rw------- 1 boincer umatlas   1003905 Jan 23 02:51 agis_schedconf.cvmfs.json
[2026-01-23 04:03:40] -rw------- 1 boincer umatlas   1516246 Jan 23 02:51 agis_ddmendpoints.agis.ALL.json
[2026-01-23 04:03:40] -rw------- 1 boincer umatlas       433 Jan 23 02:51 workernode_map.json
[2026-01-23 04:03:40] drwx------ 5 boincer umatlas      4096 Jan 23 02:51 pilot3
[2026-01-23 04:03:40] -rw------- 1 boincer umatlas 196049201 Jan 23 04:02 HITS.48310783._000112.pool.root.1
[2026-01-23 04:03:40] -rw-r--r-- 1 boincer umatlas       530 Jan 23 04:02 boinc_task_state.xml
[2026-01-23 04:03:40] -rw-r--r-- 1 boincer umatlas      5952 Jan 23 04:02 init_data.xml
[2026-01-23 04:03:40] -rw------- 1 boincer umatlas        95 Jan 23 04:02 pilot_heartbeat.json
[2026-01-23 04:03:40] -rw------- 1 boincer umatlas      1045 Jan 23 04:02 memory_monitor_summary.json
[2026-01-23 04:03:40] -rw------- 1 boincer umatlas    378976 Jan 23 04:02 log.48310783._000112.job.log.tgz.1
[2026-01-23 04:03:40] -rw------- 1 boincer umatlas      6397 Jan 23 04:02 heartbeat.json
[2026-01-23 04:03:40] -rw-r--r-- 1 boincer umatlas      8192 Jan 23 04:03 boinc_mmap_file
[2026-01-23 04:03:40] -rw-r--r-- 1 boincer umatlas        27 Jan 23 04:03 wrapper_checkpoint.txt
[2026-01-23 04:03:40] -rw------- 1 boincer umatlas      4812 Jan 23 04:03 pilotlog.txt
[2026-01-23 04:03:40] -rw------- 1 boincer umatlas    624427 Jan 23 04:03 log.48310783._000112.job.log.1
[2026-01-23 04:03:40] -rw------- 1 boincer umatlas       357 Jan 23 04:03 output.list
[2026-01-23 04:03:40] -rw-r--r-- 1 boincer umatlas       620 Jan 23 04:03 runtime_log
[2026-01-23 04:03:40] -rw------- 1 boincer umatlas   1024000 Jan 23 04:03 result.tar.gz
[2026-01-23 04:03:40] -rw------- 1 boincer umatlas       659 Jan 23 04:03 t2FKDmjzM38n9Rq4apOajLDm4fhM0noT9bVo0NGKDm0BvKDmatCyvn.diag
[2026-01-23 04:03:40] -rw-r--r-- 1 boincer umatlas      9343 Jan 23 04:03 runtime_log.err
[2026-01-23 04:03:40] -rw-r--r-- 1 boincer umatlas     22576 Jan 23 04:03 stderr.txt
[2026-01-23 04:03:40] HITS file was successfully produced:
[2026-01-23 04:03:40] -rw------- 1 boincer umatlas 196049201 Jan 23 04:02 shared/HITS.pool.root.1
[2026-01-23 04:03:40]  *** Contents of shared directory: ***
[2026-01-23 04:03:40] total 713228
[2026-01-23 04:03:40] -rw-r--r-- 2 boincer umatlas 532651904 Jan 23 02:51 ATLAS.root_0
[2026-01-23 04:03:40] -rw-r--r-- 2 boincer umatlas     15845 Jan 23 02:51 start_atlas.sh
[2026-01-23 04:03:40] -rw-r--r-- 2 boincer umatlas    597740 Jan 23 02:51 input.tar.gz
[2026-01-23 04:03:40] -rw------- 1 boincer umatlas 196049201 Jan 23 04:02 HITS.pool.root.1
[2026-01-23 04:03:40] -rw------- 1 boincer umatlas   1024000 Jan 23 04:03 result.tar.gz
04:03:42 (29424): run_atlas exited; CPU time 46154.766322
04:03:42 (29424): called boinc_finish(0)

</stderr_txt>
]]>

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