Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
02:00:40 (2676822): wrapper (7.7.26015): starting
02:00:40 (2676822): wrapper: running run_atlas (--nthreads 8)
[2026-01-23 02:00:40] Arguments: --nthreads 8
[2026-01-23 02:00:40] Threads: 8
[2026-01-23 02:00:40] Checking for CVMFS
[2026-01-23 02:00:40] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-23 02:00:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-23 02:00:41] Running cvmfs_config stat atlas.cern.ch
[2026-01-23 02:00:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-23 02:00:41] 2.13.3.0 779065 36760 103608 155425 3 126 37635514 39288833 3664 16776704 0 31449026 99.974 1669325 32546 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-23 02:00:41] CVMFS is ok
[2026-01-23 02:00:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-23 02:00:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-23 02:00:41] Further information can be found at the LHC@home message board.
[2026-01-23 02:00:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-23 02:00:41] Checking for apptainer binary...
[2026-01-23 02:00:41] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-23 02:00:41] Running /usr/bin/apptainer --version
[2026-01-23 02:00:41] apptainer version 1.4.5-2.el9
[2026-01-23 02:00:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-23 02:00:41] c-210-16.aglt2.org
[2026-01-23 02:00:41] apptainer works
[2026-01-23 02:00:41] Set ATHENA_PROC_NUMBER=8
[2026-01-23 02:00:41] Set ATHENA_CORE_NUMBER=8
[2026-01-23 02:00:41] Starting ATLAS job with PandaID=6971153114
[2026-01-23 02:00:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-23 03:09:23]  *** The last 200 lines of the pilot log: ***
[2026-01-23 03:09:23]  mtime=0
[2026-01-23 03:09:23]  protocol_id=None
[2026-01-23 03:09:23]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-23 03:09:23]  replicas=None
[2026-01-23 03:09:23]  scope=mc23_13p6TeV
[2026-01-23 03:09:23]  status=None
[2026-01-23 03:09:23]  status_code=0
[2026-01-23 03:09:23]  storage_token=
[2026-01-23 03:09:23]  surl=/tmp/boinchome/slots/3/PanDA_Pilot-6971153114/log.48215263._051931.job.log.tgz.1
[2026-01-23 03:09:23]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/34/1a/log.48215263._051931.job.log.tgz.1
[2026-01-23 03:09:23]  workdir=None
[2026-01-23 03:09:23] ]
[2026-01-23 03:09:23] 2026-01-23 08:08:46,243 | INFO     | transferring file log.48215263._051931.job.log.tgz.1 from /tmp/boinchome/slots/3/PanDA_Pilot-6971153114/log.48215263._051931.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-01-23 03:09:23] 2026-01-23 08:08:46,243 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/3/PanDA_Pilot-6971153114/log.48215263._051931.job.log.tgz.1 /tmp/boinchome/slots/3/log.48215263._051931.job
[2026-01-23 03:09:23] 2026-01-23 08:08:46,259 | INFO     | adding to output.list: log.48215263._051931.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/34/1a/log.48215263._051931.job.log.tg
[2026-01-23 03:09:23] 2026-01-23 08:08:46,259 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-23 03:09:23] 2026-01-23 08:08:46,260 | INFO     | summary of transferred files:
[2026-01-23 03:09:23] 2026-01-23 08:08:46,260 | INFO     |  -- lfn=log.48215263._051931.job.log.tgz.1, status_code=0, status=transferred
[2026-01-23 03:09:23] 2026-01-23 08:08:46,260 | INFO     | stage-out finished correctly
[2026-01-23 03:09:23] 2026-01-23 08:08:47,385 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-23 03:09:23] 2026-01-23 08:08:47,485 | INFO     | job 6971153114 has state=finished
[2026-01-23 03:09:23] 2026-01-23 08:08:47,485 | INFO     | preparing for final server update for job 6971153114 in state='finished'
[2026-01-23 03:09:23] 2026-01-23 08:08:47,486 | INFO     | this job has now completed (state=finished)
[2026-01-23 03:09:23] 2026-01-23 08:08:47,486 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-23 03:09:23] 2026-01-23 08:08:47,486 | INFO     | log transfer has been attempted: DONE
[2026-01-23 03:09:23] 2026-01-23 08:08:47,487 | INFO     | job 6971153114 has finished - writing final server update
[2026-01-23 03:09:23] 2026-01-23 08:08:47,487 | INFO     | total number of processed events: 400 (read)
[2026-01-23 03:09:23] 2026-01-23 08:08:47,488 | INFO     | executing command: lscpu
[2026-01-23 03:09:23] 2026-01-23 08:08:47,526 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2026-01-23 03:09:23] 2026-01-23 08:08:47,847 | INFO     | time since job start (4076s) is within the limit (349056.0s)
[2026-01-23 03:09:23] 2026-01-23 08:08:48,308 | WARNING  | process 2687403 can no longer be monitored (due to stat problems) - aborting
[2026-01-23 03:09:23] 2026-01-23 08:08:48,308 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6971153114/memory_monitor_summary.json (trf name=prmon)
[2026-01-23 03:09:23] 2026-01-23 08:08:48,523 | INFO     | number of running child processes to parent process 2687403: 1
[2026-01-23 03:09:23] 2026-01-23 08:08:48,523 | INFO     | maximum number of monitored processes: 6
[2026-01-23 03:09:23] 2026-01-23 08:08:49,117 | INFO     | PID=2680532 has CPU usage=10.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2026-01-23 03:09:23] 2026-01-23 08:08:49,118 | INFO     | .. there are 4 such processes running
[2026-01-23 03:09:23] 2026-01-23 08:08:50,118 | INFO     | time since job start (4079s) is within the limit (349056.0s)
[2026-01-23 03:09:23] 2026-01-23 08:08:50,956 | INFO     | CPU arch script returned: x86-64-v3
[2026-01-23 03:09:23] 2026-01-23 08:08:50,962 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2640.1826499999997
[2026-01-23 03:09:23] 2026-01-23 08:08:50,968 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6971153114/memory_monitor_summary.json (trf name=prmon)
[2026-01-23 03:09:23] 2026-01-23 08:08:50,969 | INFO     | extracted standard info from prmon json
[2026-01-23 03:09:23] 2026-01-23 08:08:50,969 | INFO     | extracted standard memory fields from prmon json
[2026-01-23 03:09:23] 2026-01-23 08:08:50,969 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-23 03:09:23] 2026-01-23 08:08:50,970 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-23 03:09:23] 2026-01-23 08:08:50,970 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-23 03:09:23] 2026-01-23 08:08:50,972 | INFO     | fitting pss+swap vs Time
[2026-01-23 03:09:23] 2026-01-23 08:08:50,972 | INFO     | sum of square deviations: 66959395.0
[2026-01-23 03:09:23] 2026-01-23 08:08:50,972 | INFO     | sum of deviations: 851069956.5
[2026-01-23 03:09:23] 2026-01-23 08:08:50,972 | INFO     | mean x: 1769153779.5
[2026-01-23 03:09:23] 2026-01-23 08:08:50,973 | INFO     | mean y: 2557177.15
[2026-01-23 03:09:23] 2026-01-23 08:08:50,973 | INFO     | intersect: -22483811317.67997
[2026-01-23 03:09:23] 2026-01-23 08:08:50,973 | INFO     | chi2: 0.025781457199679756
[2026-01-23 03:09:23] 2026-01-23 08:08:50,973 | INFO     | current memory leak: 12.71 B/s (using 60 data points, chi2=0.03)
[2026-01-23 03:09:23] 2026-01-23 08:08:50,973 | INFO     | could have reported an average CPU frequency of 2623 MHz (6 samples)
[2026-01-23 03:09:23] 2026-01-23 08:08:50,974 | INFO     | ..............................
[2026-01-23 03:09:23] 2026-01-23 08:08:50,974 | INFO     | . Timing measurements:
[2026-01-23 03:09:23] 2026-01-23 08:08:50,974 | INFO     | . get job = 0 s
[2026-01-23 03:09:23] 2026-01-23 08:08:50,974 | INFO     | . initial setup = 2 s
[2026-01-23 03:09:23] 2026-01-23 08:08:50,974 | INFO     | . payload setup = 4 s
[2026-01-23 03:09:23] 2026-01-23 08:08:50,974 | INFO     | . stage-in = 0 s
[2026-01-23 03:09:23] 2026-01-23 08:08:50,974 | INFO     | . payload execution = 4049 s
[2026-01-23 03:09:23] 2026-01-23 08:08:50,974 | INFO     | . stage-out = 0 s
[2026-01-23 03:09:23] 2026-01-23 08:08:50,974 | INFO     | . log creation = 0 s
[2026-01-23 03:09:23] 2026-01-23 08:08:50,975 | INFO     | ..............................
[2026-01-23 03:09:23] 2026-01-23 08:08:51,078 | INFO     | 
[2026-01-23 03:09:23] 2026-01-23 08:08:51,079 | INFO     | job summary report
[2026-01-23 03:09:23] 2026-01-23 08:08:51,079 | INFO     | --------------------------------------------------
[2026-01-23 03:09:23] 2026-01-23 08:08:51,079 | INFO     | PanDA job id: 6971153114
[2026-01-23 03:09:23] 2026-01-23 08:08:51,079 | INFO     | task id: 48215263
[2026-01-23 03:09:23] 2026-01-23 08:08:51,079 | INFO     | errors: (none)
[2026-01-23 03:09:23] 2026-01-23 08:08:51,079 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-23 03:09:23] 2026-01-23 08:08:51,079 | INFO     | pilot state: finished 
[2026-01-23 03:09:23] 2026-01-23 08:08:51,079 | INFO     | transexitcode: 0
[2026-01-23 03:09:23] 2026-01-23 08:08:51,080 | INFO     | exeerrorcode: 0
[2026-01-23 03:09:23] 2026-01-23 08:08:51,080 | INFO     | exeerrordiag: 
[2026-01-23 03:09:23] 2026-01-23 08:08:51,080 | INFO     | exitcode: 0
[2026-01-23 03:09:23] 2026-01-23 08:08:51,080 | INFO     | exitmsg: OK
[2026-01-23 03:09:23] 2026-01-23 08:08:51,080 | INFO     | cpuconsumptiontime: 28612 s
[2026-01-23 03:09:23] 2026-01-23 08:08:51,080 | INFO     | nevents: 400
[2026-01-23 03:09:23] 2026-01-23 08:08:51,080 | INFO     | neventsw: 0
[2026-01-23 03:09:23] 2026-01-23 08:08:51,080 | INFO     | pid: 2687403
[2026-01-23 03:09:23] 2026-01-23 08:08:51,080 | INFO     | pgrp: 2687403
[2026-01-23 03:09:23] 2026-01-23 08:08:51,081 | INFO     | corecount: 8
[2026-01-23 03:09:23] 2026-01-23 08:08:51,081 | INFO     | event service: False
[2026-01-23 03:09:23] 2026-01-23 08:08:51,081 | INFO     | sizes: {0: 2283731, 1: 2283930, 4: 2284192, 11: 2284220, 4058: 2310173, 4060: 2319171, 4061: 2319355, 4064: 2319549}
[2026-01-23 03:09:23] 2026-01-23 08:08:51,081 | INFO     | --------------------------------------------------
[2026-01-23 03:09:23] 2026-01-23 08:08:51,081 | INFO     | 
[2026-01-23 03:09:23] 2026-01-23 08:08:51,081 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2026-01-23 03:09:23] 2026-01-23 08:08:51,098 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-23 03:09:23] 2026-01-23 08:08:51,098 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-23 03:09:23] 2026-01-23 08:08:51,099 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-23 03:09:23] 2026-01-23 08:08:51,099 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-23 03:09:23] 2026-01-23 08:08:51,099 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-23 03:09:23] 2026-01-23 08:08:51,099 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-23 03:09:23] 2026-01-23 08:08:51,099 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-23 03:09:23] 2026-01-23 08:08:51,099 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-23 03:09:23] 2026-01-23 08:08:51,099 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-23 03:09:23] 2026-01-23 08:08:51,099 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-23 03:09:23] 2026-01-23 08:08:51,099 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-23 03:09:23] 2026-01-23 08:08:51,100 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-23 03:09:23] 2026-01-23 08:08:51,100 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-23 03:09:23] 2026-01-23 08:08:51,100 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-23 03:09:23] 2026-01-23 08:08:51,100 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-23 03:09:23] 2026-01-23 08:08:51,100 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-23 03:09:23] 2026-01-23 08:08:51,100 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-23 03:09:23] 2026-01-23 08:08:51,100 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-23 03:09:23] 2026-01-23 08:08:51,100 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-23 03:09:23] 2026-01-23 08:08:51,101 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-23 03:09:23] 2026-01-23 08:08:51,101 | INFO     | job 6971153114 has completed (purged errors)
[2026-01-23 03:09:23] 2026-01-23 08:08:51,101 | INFO     | overall cleanup function is called
[2026-01-23 03:09:23] 2026-01-23 08:08:52,109 | INFO     | --- collectZombieJob: --- 10, [2687403]
[2026-01-23 03:09:23] 2026-01-23 08:08:52,110 | INFO     | zombie collector waiting for pid 2687403
[2026-01-23 03:09:23] 2026-01-23 08:08:52,110 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-23 03:09:23] 2026-01-23 08:08:52,110 | INFO     | collected zombie processes
[2026-01-23 03:09:23] 2026-01-23 08:08:52,110 | INFO     | will attempt to kill all subprocesses of pid=2687403
[2026-01-23 03:09:23] 2026-01-23 08:08:52,317 | INFO     | process IDs to be killed: [2687403] (in reverse order)
[2026-01-23 03:09:23] 2026-01-23 08:08:52,376 | WARNING  | found no corresponding commands to process id(s)
[2026-01-23 03:09:23] 2026-01-23 08:08:52,376 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-23 03:09:23] 2026-01-23 08:08:52,383 | INFO     | did not find any defunct processes belonging to 2687403
[2026-01-23 03:09:23] 2026-01-23 08:08:52,388 | INFO     | did not find any defunct processes belonging to 2687403
[2026-01-23 03:09:23] 2026-01-23 08:08:52,388 | INFO     | ready for new job
[2026-01-23 03:09:23] 2026-01-23 08:08:52,389 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-23 03:09:23] 2026-01-23 08:08:52,390 | INFO     | ***************************************
[2026-01-23 03:09:23] 2026-01-23 08:08:52,390 | INFO     | ***  PanDA Pilot version 3.11.2.19  ***
[2026-01-23 03:09:23] 2026-01-23 08:08:52,390 | INFO     | ***************************************
[2026-01-23 03:09:23] 2026-01-23 08:08:52,391 | INFO     | 
[2026-01-23 03:09:23] 2026-01-23 08:08:52,393 | INFO     | architecture information:
[2026-01-23 03:09:23] 2026-01-23 08:08:52,393 | INFO     | executing command: cat /etc/os-release
[2026-01-23 03:09:23] 2026-01-23 08:08:52,404 | INFO     | cat /etc/os-release:
[2026-01-23 03:09:23] NAME="CentOS Linux"
[2026-01-23 03:09:23] VERSION="7 (Core)"
[2026-01-23 03:09:23] ID="centos"
[2026-01-23 03:09:23] ID_LIKE="rhel fedora"
[2026-01-23 03:09:23] VERSION_ID="7"
[2026-01-23 03:09:23] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-23 03:09:23] ANSI_COLOR="0;31"
[2026-01-23 03:09:23] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-23 03:09:23] HOME_URL="https://www.centos.org/"
[2026-01-23 03:09:23] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-23 03:09:23] 
[2026-01-23 03:09:23] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-23 03:09:23] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-23 03:09:23] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-23 03:09:23] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-23 03:09:23] 
[2026-01-23 03:09:23] 2026-01-23 08:08:52,404 | INFO     | ***************************************
[2026-01-23 03:09:23] 2026-01-23 08:08:52,907 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2026-01-23 03:09:23] 2026-01-23 08:08:52,921 | INFO     | sufficient remaining disk space (49138368512 B)
[2026-01-23 03:09:23] 2026-01-23 08:08:52,922 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-23 03:09:23] 2026-01-23 08:08:52,922 | INFO     | current server update state: UPDATING_FINAL
[2026-01-23 03:09:23] 2026-01-23 08:08:52,922 | INFO     | update_server=False
[2026-01-23 03:09:23] 2026-01-23 08:08:52,922 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-23 03:09:23] 2026-01-23 08:08:52,922 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-23 03:09:23] 2026-01-23 08:08:52,923 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-23 03:09:23] 2026-01-23 08:08:52,923 | INFO     | aborting loop
[2026-01-23 03:09:23] 2026-01-23 08:08:52,983 | INFO     | all job control threads have been joined
[2026-01-23 03:09:23] 2026-01-23 08:08:53,495 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-23 03:09:23] 2026-01-23 08:08:53,862 | INFO     | all data control threads have been joined
[2026-01-23 03:09:23] 2026-01-23 08:08:53,926 | INFO     | [job] queue monitor thread has finished
[2026-01-23 03:09:23] 2026-01-23 08:08:53,927 | INFO     | [job] retrieve thread has finished
[2026-01-23 03:09:23] 2026-01-23 08:08:53,928 | INFO     | [job] job monitor thread has finished
[2026-01-23 03:09:23] 2026-01-23 08:08:53,935 | INFO     | [payload] validate_post thread has finished
[2026-01-23 03:09:23] 2026-01-23 08:08:53,988 | INFO     | [job] control thread has finished
[2026-01-23 03:09:23] 2026-01-23 08:08:54,248 | INFO     | all payload control threads have been joined
[2026-01-23 03:09:23] 2026-01-23 08:08:54,374 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-23 03:09:23] 2026-01-23 08:08:54,435 | INFO     | [job] validate thread has finished
[2026-01-23 03:09:23] 2026-01-23 08:08:54,506 | INFO     | [payload] execute_payloads thread has finished
[2026-01-23 03:09:23] 2026-01-23 08:08:54,867 | INFO     | [data] control thread has finished
[2026-01-23 03:09:23] 2026-01-23 08:08:54,917 | INFO     | [job] create_data_payload thread has finished
[2026-01-23 03:09:23] 2026-01-23 08:08:54,917 | INFO     | [payload] validate_pre thread has finished
[2026-01-23 03:09:23] 2026-01-23 08:08:55,010 | INFO     | [payload] failed_post thread has finished
[2026-01-23 03:09:23] 2026-01-23 08:08:55,252 | INFO     | [payload] control thread has finished
[2026-01-23 03:09:23] 2026-01-23 08:08:55,426 | INFO     | [data] copytool_in thread has finished
[2026-01-23 03:09:23] 2026-01-23 08:08:56,379 | INFO     | [data] copytool_out thread has finished
[2026-01-23 03:09:23] 2026-01-23 08:08:57,500 | INFO     | [data] queue_monitor thread has finished
[2026-01-23 03:09:23] 2026-01-23 08:08:57,811 | INFO     | [monitor] cgroup control has ended
[2026-01-23 03:09:23] 2026-01-23 08:09:03,746 | INFO     | job.realtimelogging is not enabled
[2026-01-23 03:09:23] 2026-01-23 08:09:04,751 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-23 03:09:23] 2026-01-23 08:09:05,909 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140090959038272)>', '<ExcThread(monitor, started 140090617620224)>']
[2026-01-23 03:09:23] 2026-01-23 08:09:10,934 | INFO     | all workflow threads have been joined
[2026-01-23 03:09:23] 2026-01-23 08:09:10,935 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-23 03:09:23] 2026-01-23 08:09:10,935 | INFO     | traces error code: 0
[2026-01-23 03:09:23] 2026-01-23 08:09:10,935 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-23 03:09:23] 2026-01-23 08:09:23,455 | INFO     | PID=2680532 has CPU usage=2.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-23 03:09:23] 2026-01-23 08:09:23,455 | INFO     | .. there are 4 such processes running
[2026-01-23 03:09:23] 2026-01-23 08:09:23,456 | INFO     | found 0 job(s) in 20 queues
[2026-01-23 03:09:23] 2026-01-23 08:09:23,456 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-23 03:09:23] 2026-01-23 08:09:23,457 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-23 03:09:23] 2026-01-23 08:09:23,457 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-23 03:09:23] 2026-01-23 08:09:23,457 | INFO     | [monitor] control thread has ended
[2026-01-23 03:09:23] 2026-01-23 08:09:23,557 [wrapper] ==== pilot stdout END ====
[2026-01-23 03:09:23] 2026-01-23 08:09:23,559 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-23 03:09:23] 2026-01-23 08:09:23,562 [wrapper] pilotpid: 2680532
[2026-01-23 03:09:23] 2026-01-23 08:09:23,564 [wrapper] Pilot exit status: 0
[2026-01-23 03:09:23] 2026-01-23 08:09:23,572 [wrapper] pandaids: 6971153114
[2026-01-23 03:09:23] 2026-01-23 08:09:23,615 [wrapper] cleanup supervisor_pilot 2801032 2680533
[2026-01-23 03:09:23] 2026-01-23 08:09:23,618 [wrapper] Test setup, not cleaning
[2026-01-23 03:09:23] 2026-01-23 08:09:23,620 [wrapper] apfmon messages muted
[2026-01-23 03:09:23] 2026-01-23 08:09:23,623 [wrapper] ==== wrapper stdout END ====
[2026-01-23 03:09:23] 2026-01-23 08:09:23,625 [wrapper] ==== wrapper stderr END ====
[2026-01-23 03:09:23]  *** Error codes and diagnostics ***
[2026-01-23 03:09:23]     "exeErrorCode": 0,
[2026-01-23 03:09:23]     "exeErrorDiag": "",
[2026-01-23 03:09:23]     "pilotErrorCode": 0,
[2026-01-23 03:09:23]     "pilotErrorDiag": "",
[2026-01-23 03:09:23]  *** Listing of results directory ***
[2026-01-23 03:09:23] total 736140
[2026-01-23 03:09:23] -rw-r--r--. 1 boincer umatlas    579449 Jan 15 03:34 pilot3.tar.gz
[2026-01-23 03:09:23] -rwx------. 1 boincer umatlas     36322 Jan 15 03:36 runpilot2-wrapper.sh
[2026-01-23 03:09:23] -rw-r--r--. 1 boincer umatlas      5112 Jan 15 03:40 queuedata.json
[2026-01-23 03:09:23] -rw-r--r--. 1 boincer umatlas       100 Jan 23 02:00 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-23 03:09:23] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 23 02:00 run_atlas
[2026-01-23 03:09:23] -rw-r--r--. 1 boincer umatlas       105 Jan 23 02:00 job.xml
[2026-01-23 03:09:23] -rw-r--r--. 2 boincer umatlas 593880660 Jan 23 02:00 EVNT.32794306._001473.pool.root.1
[2026-01-23 03:09:23] -rw-r--r--. 2 boincer umatlas     15847 Jan 23 02:00 start_atlas.sh
[2026-01-23 03:09:23] drwxrwx--x. 2 boincer umatlas      4096 Jan 23 02:00 shared
[2026-01-23 03:09:23] -rw-r--r--. 2 boincer umatlas    592407 Jan 23 02:00 input.tar.gz
[2026-01-23 03:09:23] -rw-r--r--. 1 boincer umatlas         0 Jan 23 02:00 boinc_lockfile
[2026-01-23 03:09:23] -rw-r--r--. 1 boincer umatlas      2509 Jan 23 02:00 pandaJob.out
[2026-01-23 03:09:23] -rw-------. 1 boincer umatlas        57 Jan 23 02:00 setup.sh.local
[2026-01-23 03:09:23] -rw-------. 1 boincer umatlas   1003905 Jan 23 02:00 agis_schedconf.cvmfs.json
[2026-01-23 03:09:23] -rw-------. 1 boincer umatlas   1516246 Jan 23 02:00 agis_ddmendpoints.agis.ALL.json
[2026-01-23 03:09:23] drwx------. 5 boincer umatlas      4096 Jan 23 02:00 pilot3
[2026-01-23 03:09:23] -rw-r--r--. 1 boincer umatlas      6660 Jan 23 03:04 init_data.xml
[2026-01-23 03:09:23] -rw-------. 1 boincer umatlas 154147234 Jan 23 03:08 HITS.48215263._051931.pool.root.1
[2026-01-23 03:09:23] -rw-r--r--. 1 boincer umatlas       530 Jan 23 03:08 boinc_task_state.xml
[2026-01-23 03:09:23] -rw-------. 1 boincer umatlas      1033 Jan 23 03:08 memory_monitor_summary.json
[2026-01-23 03:09:23] -rw-------. 1 boincer umatlas    312162 Jan 23 03:08 log.48215263._051931.job.log.tgz.1
[2026-01-23 03:09:23] -rw-------. 1 boincer umatlas      7813 Jan 23 03:08 heartbeat.json
[2026-01-23 03:09:23] -rw-r--r--. 1 boincer umatlas      8192 Jan 23 03:09 boinc_mmap_file
[2026-01-23 03:09:23] -rw-r--r--. 1 boincer umatlas        27 Jan 23 03:09 wrapper_checkpoint.txt
[2026-01-23 03:09:23] -rw-------. 1 boincer umatlas        95 Jan 23 03:09 pilot_heartbeat.json
[2026-01-23 03:09:23] -rw-------. 1 boincer umatlas       822 Jan 23 03:09 pilotlog.txt
[2026-01-23 03:09:23] -rw-------. 1 boincer umatlas    611987 Jan 23 03:09 log.48215263._051931.job.log.1
[2026-01-23 03:09:23] -rw-------. 1 boincer umatlas       357 Jan 23 03:09 output.list
[2026-01-23 03:09:23] -rw-r--r--. 1 boincer umatlas       620 Jan 23 03:09 runtime_log
[2026-01-23 03:09:23] -rw-------. 1 boincer umatlas    942080 Jan 23 03:09 result.tar.gz
[2026-01-23 03:09:23] -rw-r--r--. 1 boincer umatlas      9342 Jan 23 03:09 runtime_log.err
[2026-01-23 03:09:23] -rw-------. 1 boincer umatlas       651 Jan 23 03:09 rDeKDmo1X08n9Rq4apOajLDm4fhM0noT9bVo0NGKDm3coKDmO2FSNm.diag
[2026-01-23 03:09:23] -rw-r--r--. 1 boincer umatlas     21812 Jan 23 03:09 stderr.txt
[2026-01-23 03:09:23] HITS file was successfully produced:
[2026-01-23 03:09:23] -rw-------. 1 boincer umatlas 154147234 Jan 23 03:08 shared/HITS.pool.root.1
[2026-01-23 03:09:23]  *** Contents of shared directory: ***
[2026-01-23 03:09:23] total 732024
[2026-01-23 03:09:23] -rw-r--r--. 2 boincer umatlas 593880660 Jan 23 02:00 ATLAS.root_0
[2026-01-23 03:09:23] -rw-r--r--. 2 boincer umatlas     15847 Jan 23 02:00 start_atlas.sh
[2026-01-23 03:09:23] -rw-r--r--. 2 boincer umatlas    592407 Jan 23 02:00 input.tar.gz
[2026-01-23 03:09:23] -rw-------. 1 boincer umatlas 154147234 Jan 23 03:08 HITS.pool.root.1
[2026-01-23 03:09:23] -rw-------. 1 boincer umatlas    942080 Jan 23 03:09 result.tar.gz
03:09:25 (2676822): run_atlas exited; CPU time 28687.615159
03:09:25 (2676822): called boinc_finish(0)

</stderr_txt>
]]>

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