Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
02:27:00 (26587): wrapper (7.7.26015): starting
02:27:00 (26587): wrapper: running run_atlas (--nthreads 12)
[2026-01-23 02:27:00] Arguments: --nthreads 12
[2026-01-23 02:27:00] Threads: 12
[2026-01-23 02:27:00] Checking for CVMFS
[2026-01-23 02:27:00] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-23 02:27:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-23 02:27:00] Running cvmfs_config stat atlas.cern.ch
[2026-01-23 02:27:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-23 02:27:00] 2.11.2.0 3103 160876 108420 155427 2 1 14611646 20275201 1 130560 0 65447179 99.911 8838183 29973 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-23 02:27:00] CVMFS is ok
[2026-01-23 02:27:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-23 02:27:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-23 02:27:00] Further information can be found at the LHC@home message board.
[2026-01-23 02:27:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-23 02:27:00] Checking for apptainer binary...
[2026-01-23 02:27:00] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-23 02:27:00] Running /usr/bin/apptainer --version
[2026-01-23 02:27:00] apptainer version 1.3.2-1.el7
[2026-01-23 02:27:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-23 02:27:02] c-115-41.aglt2.org
[2026-01-23 02:27:02] apptainer works
[2026-01-23 02:27:02] Set ATHENA_PROC_NUMBER=12
[2026-01-23 02:27:02] Set ATHENA_CORE_NUMBER=12
[2026-01-23 02:27:02] Starting ATLAS job with PandaID=6977661236
[2026-01-23 02:27:02] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-23 03:33:33]  *** The last 200 lines of the pilot log: ***
[2026-01-23 03:33:33]  filesize=405194
[2026-01-23 03:33:33]  filetype=log
[2026-01-23 03:33:33]  guid=fa809925-0678-42c2-9432-44131181be33
[2026-01-23 03:33:33]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-01-23 03:33:33]  is_altstaged=None
[2026-01-23 03:33:33]  is_tar=False
[2026-01-23 03:33:33]  lfn=log.48301086._008896.job.log.tgz.1
[2026-01-23 03:33:33]  mtime=0
[2026-01-23 03:33:33]  protocol_id=None
[2026-01-23 03:33:33]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-23 03:33:33]  replicas=None
[2026-01-23 03:33:33]  scope=mc23_13p6TeV
[2026-01-23 03:33:33]  status=None
[2026-01-23 03:33:33]  status_code=0
[2026-01-23 03:33:33]  storage_token=
[2026-01-23 03:33:33]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6977661236/log.48301086._008896.job.log.tgz.1
[2026-01-23 03:33:33]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/5b/55/log.48301086._008896.job.log.tgz.1
[2026-01-23 03:33:33]  workdir=None
[2026-01-23 03:33:33] ]
[2026-01-23 03:33:33] 2026-01-23 08:32:51,590 | INFO     | transferring file log.48301086._008896.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6977661236/log.48301086._008896.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-01-23 03:33:33] 2026-01-23 08:32:51,590 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6977661236/log.48301086._008896.job.log.tgz.1 /tmp/boinchome/slots/0/log.48301086._008896.job
[2026-01-23 03:33:33] 2026-01-23 08:32:51,615 | INFO     | adding to output.list: log.48301086._008896.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/5b/55/log.48301086._008896.job.log.tg
[2026-01-23 03:33:33] 2026-01-23 08:32:51,615 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-23 03:33:33] 2026-01-23 08:32:51,616 | INFO     | summary of transferred files:
[2026-01-23 03:33:33] 2026-01-23 08:32:51,616 | INFO     |  -- lfn=log.48301086._008896.job.log.tgz.1, status_code=0, status=transferred
[2026-01-23 03:33:33] 2026-01-23 08:32:51,616 | INFO     | stage-out finished correctly
[2026-01-23 03:33:33] 2026-01-23 08:32:52,119 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-23 03:33:33] 2026-01-23 08:32:52,236 | INFO     | time since job start (3930s) is within the limit (349056.0s)
[2026-01-23 03:33:33] 2026-01-23 08:32:53,818 | INFO     | monitor loop #300: job 0:6977661236 is in state 'finished'
[2026-01-23 03:33:33] 2026-01-23 08:32:53,818 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-23 03:33:33] 2026-01-23 08:32:54,242 | INFO     | time since job start (3932s) is within the limit (349056.0s)
[2026-01-23 03:33:33] 2026-01-23 08:32:54,879 | INFO     | job 6977661236 has state=finished
[2026-01-23 03:33:33] 2026-01-23 08:32:54,879 | INFO     | preparing for final server update for job 6977661236 in state='finished'
[2026-01-23 03:33:33] 2026-01-23 08:32:54,945 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2026-01-23 03:33:33] 2026-01-23 08:32:54,945 | INFO     | reading metadata from: /tmp/boinchome/slots/0/PanDA_Pilot-6977661236/jobReport.json
[2026-01-23 03:33:33] 2026-01-23 08:32:54,948 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-01-23 03:33:33] 2026-01-23 08:32:54,948 | INFO     | this job has now completed (state=finished)
[2026-01-23 03:33:33] 2026-01-23 08:32:54,948 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-23 03:33:33] 2026-01-23 08:32:54,948 | INFO     | log transfer has been attempted: DONE
[2026-01-23 03:33:33] 2026-01-23 08:32:54,949 | INFO     | job 6977661236 has finished - writing final server update
[2026-01-23 03:33:33] 2026-01-23 08:32:54,949 | INFO     | total number of processed events: 400 (read)
[2026-01-23 03:33:33] 2026-01-23 08:32:54,950 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6977661236/memory_monitor_summary.json (trf name=prmon)
[2026-01-23 03:33:33] 2026-01-23 08:32:54,951 | INFO     | extracted standard info from prmon json
[2026-01-23 03:33:33] 2026-01-23 08:32:54,951 | INFO     | extracted standard memory fields from prmon json
[2026-01-23 03:33:33] 2026-01-23 08:32:54,951 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-23 03:33:33] 2026-01-23 08:32:54,951 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-23 03:33:33] 2026-01-23 08:32:54,951 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-23 03:33:33] 2026-01-23 08:32:54,953 | INFO     | fitting pss+swap vs Time
[2026-01-23 03:33:33] 2026-01-23 08:32:54,953 | INFO     | sum of square deviations: 57407588.0
[2026-01-23 03:33:33] 2026-01-23 08:32:54,953 | INFO     | sum of deviations: -3955903924.0
[2026-01-23 03:33:33] 2026-01-23 08:32:54,953 | INFO     | mean x: 1769155279.0
[2026-01-23 03:33:33] 2026-01-23 08:32:54,953 | INFO     | mean y: 2875672.754385965
[2026-01-23 03:33:33] 2026-01-23 08:32:54,953 | INFO     | intersect: 121913733700.11855
[2026-01-23 03:33:33] 2026-01-23 08:32:54,953 | INFO     | chi2: 0.10189822261201045
[2026-01-23 03:33:33] 2026-01-23 08:32:54,954 | INFO     | current memory leak: -68.91 B/s (using 57 data points, chi2=0.10)
[2026-01-23 03:33:33] 2026-01-23 08:32:54,954 | INFO     | could have reported an average CPU frequency of 1751 MHz (6 samples)
[2026-01-23 03:33:33] 2026-01-23 08:32:54,954 | INFO     | ..............................
[2026-01-23 03:33:33] 2026-01-23 08:32:54,954 | INFO     | . Timing measurements:
[2026-01-23 03:33:33] 2026-01-23 08:32:54,954 | INFO     | . get job = 0 s
[2026-01-23 03:33:33] 2026-01-23 08:32:54,954 | INFO     | . initial setup = 7 s
[2026-01-23 03:33:33] 2026-01-23 08:32:54,954 | INFO     | . payload setup = 7 s
[2026-01-23 03:33:33] 2026-01-23 08:32:54,954 | INFO     | . stage-in = 0 s
[2026-01-23 03:33:33] 2026-01-23 08:32:54,955 | INFO     | . payload execution = 3906 s
[2026-01-23 03:33:33] 2026-01-23 08:32:54,955 | INFO     | . stage-out = 0 s
[2026-01-23 03:33:33] 2026-01-23 08:32:54,955 | INFO     | . log creation = 0 s
[2026-01-23 03:33:33] 2026-01-23 08:32:54,955 | INFO     | ..............................
[2026-01-23 03:33:33] 2026-01-23 08:32:55,026 | INFO     | 
[2026-01-23 03:33:33] 2026-01-23 08:32:55,026 | INFO     | job summary report
[2026-01-23 03:33:33] 2026-01-23 08:32:55,026 | INFO     | --------------------------------------------------
[2026-01-23 03:33:33] 2026-01-23 08:32:55,026 | INFO     | PanDA job id: 6977661236
[2026-01-23 03:33:33] 2026-01-23 08:32:55,026 | INFO     | task id: 48301086
[2026-01-23 03:33:33] 2026-01-23 08:32:55,026 | INFO     | errors: (none)
[2026-01-23 03:33:33] 2026-01-23 08:32:55,027 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-23 03:33:33] 2026-01-23 08:32:55,027 | INFO     | pilot state: finished 
[2026-01-23 03:33:33] 2026-01-23 08:32:55,027 | INFO     | transexitcode: 0
[2026-01-23 03:33:33] 2026-01-23 08:32:55,027 | INFO     | exeerrorcode: 0
[2026-01-23 03:33:33] 2026-01-23 08:32:55,027 | INFO     | exeerrordiag: 
[2026-01-23 03:33:33] 2026-01-23 08:32:55,027 | INFO     | exitcode: 0
[2026-01-23 03:33:33] 2026-01-23 08:32:55,028 | INFO     | exitmsg: OK
[2026-01-23 03:33:33] 2026-01-23 08:32:55,028 | INFO     | cpuconsumptiontime: 41270 s
[2026-01-23 03:33:33] 2026-01-23 08:32:55,028 | INFO     | nevents: 400
[2026-01-23 03:33:33] 2026-01-23 08:32:55,028 | INFO     | neventsw: 0
[2026-01-23 03:33:33] 2026-01-23 08:32:55,028 | INFO     | pid: 2408
[2026-01-23 03:33:33] 2026-01-23 08:32:55,028 | INFO     | pgrp: 2408
[2026-01-23 03:33:33] 2026-01-23 08:32:55,028 | INFO     | corecount: 12
[2026-01-23 03:33:33] 2026-01-23 08:32:55,028 | INFO     | event service: False
[2026-01-23 03:33:33] 2026-01-23 08:32:55,028 | INFO     | sizes: {0: 2283150, 1: 2284268, 12: 2284268, 3917: 2310049, 3918: 2319047, 3919: 2319103, 3921: 2319425}
[2026-01-23 03:33:33] 2026-01-23 08:32:55,029 | INFO     | --------------------------------------------------
[2026-01-23 03:33:33] 2026-01-23 08:32:55,029 | INFO     | 
[2026-01-23 03:33:33] 2026-01-23 08:32:55,029 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-23 03:33:33] 2026-01-23 08:32:55,053 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-23 03:33:33] 2026-01-23 08:32:55,053 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-23 03:33:33] 2026-01-23 08:32:55,054 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-23 03:33:33] 2026-01-23 08:32:55,054 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-23 03:33:33] 2026-01-23 08:32:55,054 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-23 03:33:33] 2026-01-23 08:32:55,054 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-23 03:33:33] 2026-01-23 08:32:55,054 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-23 03:33:33] 2026-01-23 08:32:55,055 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-23 03:33:33] 2026-01-23 08:32:55,055 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-23 03:33:33] 2026-01-23 08:32:55,055 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-23 03:33:33] 2026-01-23 08:32:55,055 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-23 03:33:33] 2026-01-23 08:32:55,055 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-23 03:33:33] 2026-01-23 08:32:55,055 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-23 03:33:33] 2026-01-23 08:32:55,056 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-23 03:33:33] 2026-01-23 08:32:55,056 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-23 03:33:33] 2026-01-23 08:32:55,056 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-23 03:33:33] 2026-01-23 08:32:55,056 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-23 03:33:33] 2026-01-23 08:32:55,056 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-23 03:33:33] 2026-01-23 08:32:55,056 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-23 03:33:33] 2026-01-23 08:32:55,057 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-23 03:33:33] 2026-01-23 08:32:55,057 | INFO     | job 6977661236 has completed (purged errors)
[2026-01-23 03:33:33] 2026-01-23 08:32:55,057 | INFO     | overall cleanup function is called
[2026-01-23 03:33:33] 2026-01-23 08:32:56,065 | INFO     | --- collectZombieJob: --- 10, [2408]
[2026-01-23 03:33:33] 2026-01-23 08:32:56,065 | INFO     | zombie collector waiting for pid 2408
[2026-01-23 03:33:33] 2026-01-23 08:32:56,066 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-23 03:33:33] 2026-01-23 08:32:56,066 | INFO     | collected zombie processes
[2026-01-23 03:33:33] 2026-01-23 08:32:56,066 | INFO     | will attempt to kill all subprocesses of pid=2408
[2026-01-23 03:33:33] 2026-01-23 08:32:56,152 | INFO     | process IDs to be killed: [2408] (in reverse order)
[2026-01-23 03:33:33] 2026-01-23 08:32:56,212 | WARNING  | found no corresponding commands to process id(s)
[2026-01-23 03:33:33] 2026-01-23 08:32:56,213 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-23 03:33:33] 2026-01-23 08:32:56,217 | INFO     | did not find any defunct processes belonging to 2408
[2026-01-23 03:33:33] 2026-01-23 08:32:56,220 | INFO     | did not find any defunct processes belonging to 2408
[2026-01-23 03:33:33] 2026-01-23 08:32:56,220 | INFO     | ready for new job
[2026-01-23 03:33:33] 2026-01-23 08:32:56,220 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-23 03:33:33] 2026-01-23 08:32:56,221 | INFO     | **************************************
[2026-01-23 03:33:33] 2026-01-23 08:32:56,221 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-23 03:33:33] 2026-01-23 08:32:56,221 | INFO     | **************************************
[2026-01-23 03:33:33] 2026-01-23 08:32:56,221 | INFO     | 
[2026-01-23 03:33:33] 2026-01-23 08:32:56,222 | INFO     | architecture information:
[2026-01-23 03:33:33] 2026-01-23 08:32:56,222 | INFO     | executing command: cat /etc/os-release
[2026-01-23 03:33:33] 2026-01-23 08:32:56,237 | INFO     | cat /etc/os-release:
[2026-01-23 03:33:33] NAME="CentOS Linux"
[2026-01-23 03:33:33] VERSION="7 (Core)"
[2026-01-23 03:33:33] ID="centos"
[2026-01-23 03:33:33] ID_LIKE="rhel fedora"
[2026-01-23 03:33:33] VERSION_ID="7"
[2026-01-23 03:33:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-23 03:33:33] ANSI_COLOR="0;31"
[2026-01-23 03:33:33] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-23 03:33:33] HOME_URL="https://www.centos.org/"
[2026-01-23 03:33:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-23 03:33:33] 
[2026-01-23 03:33:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-23 03:33:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-23 03:33:33] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-23 03:33:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-23 03:33:33] 
[2026-01-23 03:33:33] 2026-01-23 08:32:56,237 | INFO     | **************************************
[2026-01-23 03:33:33] 2026-01-23 08:32:56,740 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-23 03:33:33] 2026-01-23 08:32:56,757 | INFO     | sufficient remaining disk space (18037604352 B)
[2026-01-23 03:33:33] 2026-01-23 08:32:56,758 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-23 03:33:33] 2026-01-23 08:32:56,758 | INFO     | current server update state: UPDATING_FINAL
[2026-01-23 03:33:33] 2026-01-23 08:32:56,758 | INFO     | update_server=False
[2026-01-23 03:33:33] 2026-01-23 08:32:56,758 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-23 03:33:33] 2026-01-23 08:32:56,759 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-23 03:33:33] 2026-01-23 08:32:57,198 | INFO     | all data control threads have been joined
[2026-01-23 03:33:33] 2026-01-23 08:32:57,200 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-23 03:33:33] 2026-01-23 08:32:57,326 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-23 03:33:33] 2026-01-23 08:32:57,327 | INFO     | aborting loop
[2026-01-23 03:33:33] 2026-01-23 08:32:57,615 | INFO     | all payload control threads have been joined
[2026-01-23 03:33:33] 2026-01-23 08:32:57,764 | INFO     | [job] retrieve thread has finished
[2026-01-23 03:33:33] 2026-01-23 08:32:57,764 | INFO     | [job] queue monitor thread has finished
[2026-01-23 03:33:33] 2026-01-23 08:32:57,869 | INFO     | [data] copytool_in thread has finished
[2026-01-23 03:33:33] 2026-01-23 08:32:57,873 | INFO     | [payload] validate_pre thread has finished
[2026-01-23 03:33:33] 2026-01-23 08:32:58,086 | INFO     | [payload] validate_post thread has finished
[2026-01-23 03:33:33] 2026-01-23 08:32:58,198 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-23 03:33:33] 2026-01-23 08:32:58,204 | INFO     | [data] control thread has finished
[2026-01-23 03:33:33] 2026-01-23 08:32:58,253 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-23 03:33:33] 2026-01-23 08:32:58,337 | INFO     | [job] job monitor thread has finished
[2026-01-23 03:33:33] 2026-01-23 08:32:58,341 | INFO     | all job control threads have been joined
[2026-01-23 03:33:33] 2026-01-23 08:32:58,605 | INFO     | [payload] failed_post thread has finished
[2026-01-23 03:33:33] 2026-01-23 08:32:58,621 | INFO     | [payload] control thread has finished
[2026-01-23 03:33:33] 2026-01-23 08:32:58,863 | INFO     | [job] validate thread has finished
[2026-01-23 03:33:33] 2026-01-23 08:32:58,920 | INFO     | [job] create_data_payload thread has finished
[2026-01-23 03:33:33] 2026-01-23 08:32:59,080 | INFO     | [payload] execute_payloads thread has finished
[2026-01-23 03:33:33] 2026-01-23 08:32:59,206 | INFO     | [data] copytool_out thread has finished
[2026-01-23 03:33:33] 2026-01-23 08:32:59,346 | INFO     | [job] control thread has finished
[2026-01-23 03:33:33] 2026-01-23 08:33:02,204 | INFO     | [data] queue_monitor thread has finished
[2026-01-23 03:33:33] 2026-01-23 08:33:27,441 | INFO     | PID=30323 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-23 03:33:33] 2026-01-23 08:33:27,447 | INFO     | found 0 job(s) in 20 queues
[2026-01-23 03:33:33] 2026-01-23 08:33:27,447 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-23 03:33:33] 2026-01-23 08:33:27,447 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-23 03:33:33] 2026-01-23 08:33:27,596 | INFO     | [monitor] cgroup control has ended
[2026-01-23 03:33:33] 2026-01-23 08:33:27,685 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139643096540992)>', '<ExcThread(monitor, started 139642489771776)>']
[2026-01-23 03:33:33] 2026-01-23 08:33:28,453 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-23 03:33:33] 2026-01-23 08:33:28,453 | INFO     | [monitor] control thread has ended
[2026-01-23 03:33:33] 2026-01-23 08:33:32,689 | INFO     | all workflow threads have been joined
[2026-01-23 03:33:33] 2026-01-23 08:33:32,689 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-23 03:33:33] 2026-01-23 08:33:32,699 | INFO     | traces error code: 0
[2026-01-23 03:33:33] 2026-01-23 08:33:32,701 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-23 03:33:33] 2026-01-23 08:33:32,799 [wrapper] ==== pilot stdout END ====
[2026-01-23 03:33:33] 2026-01-23 08:33:32,802 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-23 03:33:33] 2026-01-23 08:33:32,806 [wrapper] pilotpid: 30323
[2026-01-23 03:33:33] 2026-01-23 08:33:32,809 [wrapper] Pilot exit status: 0
[2026-01-23 03:33:33] 2026-01-23 08:33:32,825 [wrapper] pandaids: 6977661236
[2026-01-23 03:33:33] 2026-01-23 08:33:32,864 [wrapper] cleanup supervisor_pilot 28966 30324
[2026-01-23 03:33:33] 2026-01-23 08:33:32,868 [wrapper] Test setup, not cleaning
[2026-01-23 03:33:33] 2026-01-23 08:33:32,872 [wrapper] apfmon messages muted
[2026-01-23 03:33:33] 2026-01-23 08:33:32,876 [wrapper] ==== wrapper stdout END ====
[2026-01-23 03:33:33] 2026-01-23 08:33:32,879 [wrapper] ==== wrapper stderr END ====
[2026-01-23 03:33:33]  *** Error codes and diagnostics ***
[2026-01-23 03:33:33]     "exeErrorCode": 0,
[2026-01-23 03:33:33]     "exeErrorDiag": "",
[2026-01-23 03:33:33]     "pilotErrorCode": 0,
[2026-01-23 03:33:33]     "pilotErrorDiag": "",
[2026-01-23 03:33:33]  *** Listing of results directory ***
[2026-01-23 03:33:33] total 660696
[2026-01-23 03:33:33] -rw-r--r-- 1 boincer umatlas    621528 Jan 14 06:27 pilot3.tar.gz
[2026-01-23 03:33:33] -rwx------ 1 boincer umatlas     36322 Jan 22 10:20 runpilot2-wrapper.sh
[2026-01-23 03:33:33] -rw-r--r-- 1 boincer umatlas      5111 Jan 22 10:21 queuedata.json
[2026-01-23 03:33:33] -rw-r--r-- 1 boincer umatlas       100 Jan 23 02:26 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-23 03:33:33] -rwxr-xr-x 1 boincer umatlas      7986 Jan 23 02:26 run_atlas
[2026-01-23 03:33:33] -rw-r--r-- 1 boincer umatlas       105 Jan 23 02:26 job.xml
[2026-01-23 03:33:33] -rw-r--r-- 2 boincer umatlas 490900867 Jan 23 02:27 EVNT.48301084._000178.pool.root.1
[2026-01-23 03:33:33] -rw-r--r-- 2 boincer umatlas     15845 Jan 23 02:27 start_atlas.sh
[2026-01-23 03:33:33] drwxrwx--x 2 boincer umatlas      4096 Jan 23 02:27 shared
[2026-01-23 03:33:33] -rw-r--r-- 2 boincer umatlas    634120 Jan 23 02:27 input.tar.gz
[2026-01-23 03:33:33] -rw-r--r-- 1 boincer umatlas         0 Jan 23 02:27 boinc_lockfile
[2026-01-23 03:33:33] -rw-r--r-- 1 boincer umatlas      2521 Jan 23 02:27 pandaJob.out
[2026-01-23 03:33:33] -rw------- 1 boincer umatlas        57 Jan 23 02:27 setup.sh.local
[2026-01-23 03:33:33] -rw------- 1 boincer umatlas   1003905 Jan 23 02:27 agis_schedconf.cvmfs.json
[2026-01-23 03:33:33] -rw------- 1 boincer umatlas   1516246 Jan 23 02:27 agis_ddmendpoints.agis.ALL.json
[2026-01-23 03:33:33] -rw------- 1 boincer umatlas       434 Jan 23 02:27 workernode_map.json
[2026-01-23 03:33:33] drwx------ 5 boincer umatlas      4096 Jan 23 02:27 pilot3
[2026-01-23 03:33:33] -rw-r--r-- 1 boincer umatlas      5954 Jan 23 03:32 init_data.xml
[2026-01-23 03:33:33] -rw------- 1 boincer umatlas 179604915 Jan 23 03:32 HITS.48301086._008896.pool.root.1
[2026-01-23 03:33:33] -rw-r--r-- 1 boincer umatlas       530 Jan 23 03:32 boinc_task_state.xml
[2026-01-23 03:33:33] -rw------- 1 boincer umatlas      1045 Jan 23 03:32 memory_monitor_summary.json
[2026-01-23 03:33:33] -rw------- 1 boincer umatlas    405194 Jan 23 03:32 log.48301086._008896.job.log.tgz.1
[2026-01-23 03:33:33] -rw------- 1 boincer umatlas      6411 Jan 23 03:32 heartbeat.json
[2026-01-23 03:33:33] -rw-r--r-- 1 boincer umatlas      8192 Jan 23 03:33 boinc_mmap_file
[2026-01-23 03:33:33] -rw-r--r-- 1 boincer umatlas        27 Jan 23 03:33 wrapper_checkpoint.txt
[2026-01-23 03:33:33] -rw------- 1 boincer umatlas        95 Jan 23 03:33 pilot_heartbeat.json
[2026-01-23 03:33:33] -rw------- 1 boincer umatlas      4742 Jan 23 03:33 pilotlog.txt
[2026-01-23 03:33:33] -rw------- 1 boincer umatlas    606728 Jan 23 03:33 log.48301086._008896.job.log.1
[2026-01-23 03:33:33] -rw------- 1 boincer umatlas       357 Jan 23 03:33 output.list
[2026-01-23 03:33:33] -rw-r--r-- 1 boincer umatlas       620 Jan 23 03:33 runtime_log
[2026-01-23 03:33:33] -rw------- 1 boincer umatlas   1034240 Jan 23 03:33 result.tar.gz
[2026-01-23 03:33:33] -rw-r--r-- 1 boincer umatlas      9343 Jan 23 03:33 runtime_log.err
[2026-01-23 03:33:33] -rw------- 1 boincer umatlas       659 Jan 23 03:33 BL8NDm0eB38n9Rq4apOajLDm4fhM0noT9bVo0NGKDmu8tKDm9tkWnm.diag
[2026-01-23 03:33:33] -rw-r--r-- 1 boincer umatlas     21210 Jan 23 03:33 stderr.txt
[2026-01-23 03:33:33] HITS file was successfully produced:
[2026-01-23 03:33:33] -rw------- 1 boincer umatlas 179604915 Jan 23 03:32 shared/HITS.pool.root.1
[2026-01-23 03:33:33]  *** Contents of shared directory: ***
[2026-01-23 03:33:33] total 656448
[2026-01-23 03:33:33] -rw-r--r-- 2 boincer umatlas 490900867 Jan 23 02:27 ATLAS.root_0
[2026-01-23 03:33:33] -rw-r--r-- 2 boincer umatlas     15845 Jan 23 02:27 start_atlas.sh
[2026-01-23 03:33:33] -rw-r--r-- 2 boincer umatlas    634120 Jan 23 02:27 input.tar.gz
[2026-01-23 03:33:33] -rw------- 1 boincer umatlas 179604915 Jan 23 03:32 HITS.pool.root.1
[2026-01-23 03:33:33] -rw------- 1 boincer umatlas   1034240 Jan 23 03:33 result.tar.gz
03:33:34 (26587): run_atlas exited; CPU time 41234.132650
03:33:34 (26587): called boinc_finish(0)

</stderr_txt>
]]>

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