Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:06:04 (825486): wrapper (7.7.26015): starting
00:06:04 (825486): wrapper: running run_atlas (--nthreads 8)
[2026-01-23 00:06:04] Arguments: --nthreads 8
[2026-01-23 00:06:04] Threads: 8
[2026-01-23 00:06:04] Checking for CVMFS
[2026-01-23 00:06:05] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-23 00:06:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-23 00:06:06] Running cvmfs_config stat atlas.cern.ch
[2026-01-23 00:06:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-23 00:06:07] 2.13.3.0 8402 40793 202796 155422 0 247 35347421 40960000 10918 16776704 0 25577640 99.696 23063037 38787 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-23 00:06:07] CVMFS is ok
[2026-01-23 00:06:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-23 00:06:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-23 00:06:08] Further information can be found at the LHC@home message board.
[2026-01-23 00:06:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-23 00:06:08] Checking for apptainer binary...
[2026-01-23 00:06:08] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-23 00:06:08] Running /usr/bin/apptainer --version
[2026-01-23 00:06:08] apptainer version 1.4.5-2.el9
[2026-01-23 00:06:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-23 00:06:08] c-211-14.aglt2.org
[2026-01-23 00:06:08] apptainer works
[2026-01-23 00:06:09] Set ATHENA_PROC_NUMBER=8
[2026-01-23 00:06:09] Set ATHENA_CORE_NUMBER=8
[2026-01-23 00:06:09] Starting ATLAS job with PandaID=6978070737
[2026-01-23 00:06:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-23 07:45:33]  *** The last 200 lines of the pilot log: ***
[2026-01-23 07:45:33] 2026-01-23 12:44:58,997 | INFO     | preparing for final server update for job 6978070737 in state='finished'
[2026-01-23 07:45:33] 2026-01-23 12:44:58,997 | INFO     | reading metadata from: /tmp/boinchome/slots/5/PanDA_Pilot-6978070737/jobReport.json
[2026-01-23 07:45:33] 2026-01-23 12:44:59,000 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/5/workernode_map.json
[2026-01-23 07:45:33] 2026-01-23 12:44:59,001 | INFO     | this job has now completed (state=finished)
[2026-01-23 07:45:33] 2026-01-23 12:44:59,002 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-23 07:45:33] 2026-01-23 12:44:59,002 | INFO     | log transfer has been attempted: DONE
[2026-01-23 07:45:33] 2026-01-23 12:44:59,002 | INFO     | job 6978070737 has finished - writing final server update
[2026-01-23 07:45:33] 2026-01-23 12:44:59,002 | INFO     | total number of processed events: 400 (read)
[2026-01-23 07:45:33] 2026-01-23 12:44:59,037 | INFO     | using path: /tmp/boinchome/slots/5/PanDA_Pilot-6978070737/memory_monitor_summary.json (trf name=prmon)
[2026-01-23 07:45:33] 2026-01-23 12:44:59,037 | INFO     | extracted standard info from prmon json
[2026-01-23 07:45:33] 2026-01-23 12:44:59,038 | INFO     | extracted standard memory fields from prmon json
[2026-01-23 07:45:33] 2026-01-23 12:44:59,038 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-23 07:45:33] 2026-01-23 12:44:59,042 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-23 07:45:33] 2026-01-23 12:44:59,043 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-23 07:45:33] 2026-01-23 12:44:59,092 | INFO     | fitting pss+swap vs Time
[2026-01-23 07:45:33] 2026-01-23 12:44:59,093 | INFO     | sum of square deviations: 27881893158.694122
[2026-01-23 07:45:33] 2026-01-23 12:44:59,113 | INFO     | sum of deviations: 149381284643.41068
[2026-01-23 07:45:33] 2026-01-23 12:44:59,114 | INFO     | mean x: 1769158622.2924106
[2026-01-23 07:45:33] 2026-01-23 12:44:59,114 | INFO     | mean y: 2484634.7678571427
[2026-01-23 07:45:33] 2026-01-23 12:44:59,114 | INFO     | intersect: -9476039159.574976
[2026-01-23 07:45:33] 2026-01-23 12:44:59,115 | INFO     | chi2: 3.4096652415439284
[2026-01-23 07:45:33] 2026-01-23 12:44:59,116 | INFO     | sum of square deviations: 26958831335.119576
[2026-01-23 07:45:33] 2026-01-23 12:44:59,121 | INFO     | sum of deviations: 176863097637.7944
[2026-01-23 07:45:33] 2026-01-23 12:44:59,121 | INFO     | mean x: 1769158469.799097
[2026-01-23 07:45:33] 2026-01-23 12:44:59,121 | INFO     | mean y: 2489128.986455982
[2026-01-23 07:45:33] 2026-01-23 12:44:59,122 | INFO     | intersect: -11604054318.36216
[2026-01-23 07:45:33] 2026-01-23 12:44:59,122 | INFO     | chi2: 2.604919279513412
[2026-01-23 07:45:33] 2026-01-23 12:44:59,123 | INFO     | current chi2=2.604919279513412 (change=23.601905319776193 %)
[2026-01-23 07:45:33] 2026-01-23 12:44:59,123 | INFO     | right removable region: 442
[2026-01-23 07:45:33] 2026-01-23 12:44:59,124 | INFO     | sum of square deviations: 26958641990.518944
[2026-01-23 07:45:33] 2026-01-23 12:44:59,129 | INFO     | sum of deviations: 39853516106.94132
[2026-01-23 07:45:33] 2026-01-23 12:44:59,130 | INFO     | mean x: 1769158774.8013544
[2026-01-23 07:45:33] 2026-01-23 12:44:59,130 | INFO     | mean y: 2502684.4311512415
[2026-01-23 07:45:33] 2026-01-23 12:44:59,130 | INFO     | intersect: -2612881197.000226
[2026-01-23 07:45:33] 2026-01-23 12:44:59,131 | INFO     | chi2: 1.0066880089272308
[2026-01-23 07:45:33] 2026-01-23 12:44:59,131 | INFO     | current chi2=1.0066880089272308 (change=70.47545909605503 %)
[2026-01-23 07:45:33] 2026-01-23 12:44:59,132 | INFO     | sum of square deviations: 26056022639.39041
[2026-01-23 07:45:33] 2026-01-23 12:44:59,137 | INFO     | sum of deviations: 10050146360.760246
[2026-01-23 07:45:33] 2026-01-23 12:44:59,137 | INFO     | mean x: 1769158927.3082192
[2026-01-23 07:45:33] 2026-01-23 12:44:59,137 | INFO     | mean y: 2507711.705479452
[2026-01-23 07:45:33] 2026-01-23 12:44:59,137 | INFO     | intersect: -679879865.2846353
[2026-01-23 07:45:33] 2026-01-23 12:44:59,138 | INFO     | chi2: 0.848862257169251
[2026-01-23 07:45:33] 2026-01-23 12:44:59,138 | INFO     | current chi2=0.848862257169251 (change=15.677722428239266 %)
[2026-01-23 07:45:33] 2026-01-23 12:44:59,138 | INFO     | left removable region: 20
[2026-01-23 07:45:33] 2026-01-23 12:44:59,139 | INFO     | sum of square deviations: 23303730205.812645
[2026-01-23 07:45:33] 2026-01-23 12:44:59,144 | INFO     | sum of deviations: 25885627030.523693
[2026-01-23 07:45:33] 2026-01-23 12:44:59,144 | INFO     | mean x: 1769159049.3199053
[2026-01-23 07:45:33] 2026-01-23 12:44:59,145 | INFO     | mean y: 2514676.092417062
[2026-01-23 07:45:33] 2026-01-23 12:44:59,145 | INFO     | intersect: -1962655316.1755207
[2026-01-23 07:45:33] 2026-01-23 12:44:59,145 | INFO     | chi2: 0.0042370852760958205
[2026-01-23 07:45:33] 2026-01-23 12:44:59,146 | INFO     | current memory leak: 1.11 B/s (using 422 data points, chi2=0.00)
[2026-01-23 07:45:33] 2026-01-23 12:44:59,147 | INFO     | could have reported an average CPU frequency of 2493 MHz (19 samples)
[2026-01-23 07:45:33] 2026-01-23 12:44:59,147 | INFO     | ..............................
[2026-01-23 07:45:33] 2026-01-23 12:44:59,147 | INFO     | . Timing measurements:
[2026-01-23 07:45:33] 2026-01-23 12:44:59,147 | INFO     | . get job = 0 s
[2026-01-23 07:45:33] 2026-01-23 12:44:59,147 | INFO     | . initial setup = 46 s
[2026-01-23 07:45:33] 2026-01-23 12:44:59,148 | INFO     | . payload setup = 50 s
[2026-01-23 07:45:33] 2026-01-23 12:44:59,148 | INFO     | . stage-in = 1 s
[2026-01-23 07:45:33] 2026-01-23 12:44:59,148 | INFO     | . payload execution = 27329 s
[2026-01-23 07:45:33] 2026-01-23 12:44:59,148 | INFO     | . stage-out = 4 s
[2026-01-23 07:45:33] 2026-01-23 12:44:59,148 | INFO     | . log creation = 1 s
[2026-01-23 07:45:33] 2026-01-23 12:44:59,148 | INFO     | ..............................
[2026-01-23 07:45:33] 2026-01-23 12:44:59,813 | INFO     | 
[2026-01-23 07:45:33] 2026-01-23 12:44:59,816 | INFO     | job summary report
[2026-01-23 07:45:33] 2026-01-23 12:44:59,817 | INFO     | --------------------------------------------------
[2026-01-23 07:45:33] 2026-01-23 12:44:59,817 | INFO     | PanDA job id: 6978070737
[2026-01-23 07:45:33] 2026-01-23 12:44:59,817 | INFO     | task id: 48310670
[2026-01-23 07:45:33] 2026-01-23 12:44:59,817 | INFO     | errors: (none)
[2026-01-23 07:45:33] 2026-01-23 12:44:59,817 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-23 07:45:33] 2026-01-23 12:44:59,817 | INFO     | pilot state: finished 
[2026-01-23 07:45:33] 2026-01-23 12:44:59,817 | INFO     | transexitcode: 0
[2026-01-23 07:45:33] 2026-01-23 12:44:59,817 | INFO     | exeerrorcode: 0
[2026-01-23 07:45:33] 2026-01-23 12:44:59,818 | INFO     | exeerrordiag: 
[2026-01-23 07:45:33] 2026-01-23 12:44:59,818 | INFO     | exitcode: 0
[2026-01-23 07:45:33] 2026-01-23 12:44:59,818 | INFO     | exitmsg: OK
[2026-01-23 07:45:33] 2026-01-23 12:44:59,818 | INFO     | cpuconsumptiontime: 51617 s
[2026-01-23 07:45:33] 2026-01-23 12:44:59,818 | INFO     | nevents: 400
[2026-01-23 07:45:33] 2026-01-23 12:44:59,818 | INFO     | neventsw: 0
[2026-01-23 07:45:33] 2026-01-23 12:44:59,818 | INFO     | pid: 863181
[2026-01-23 07:45:33] 2026-01-23 12:44:59,818 | INFO     | pgrp: 863181
[2026-01-23 07:45:33] 2026-01-23 12:44:59,818 | INFO     | corecount: 8
[2026-01-23 07:45:33] 2026-01-23 12:44:59,819 | INFO     | event service: False
[2026-01-23 07:45:33] 2026-01-23 12:44:59,819 | INFO     | sizes: {0: 2283751, 1: 2283835, 2: 2283835, 3: 2283863, 4: 2283863, 5: 2284508, 27383: 2320991, 27384: 2320990, 27388: 2330044, 27391: 2330100, 27392: 2330294}
[2026-01-23 07:45:33] 2026-01-23 12:44:59,819 | INFO     | --------------------------------------------------
[2026-01-23 07:45:33] 2026-01-23 12:44:59,819 | INFO     | 
[2026-01-23 07:45:33] 2026-01-23 12:44:59,819 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2026-01-23 07:45:33] 2026-01-23 12:45:00,033 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-23 07:45:33] 2026-01-23 12:45:00,033 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-23 07:45:33] 2026-01-23 12:45:00,033 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-23 07:45:33] 2026-01-23 12:45:00,033 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-23 07:45:33] 2026-01-23 12:45:00,034 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-23 07:45:33] 2026-01-23 12:45:00,034 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-23 07:45:33] 2026-01-23 12:45:00,034 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-23 07:45:33] 2026-01-23 12:45:00,034 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-23 07:45:33] 2026-01-23 12:45:00,034 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-23 07:45:33] 2026-01-23 12:45:00,034 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-23 07:45:33] 2026-01-23 12:45:00,034 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-23 07:45:33] 2026-01-23 12:45:00,034 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-23 07:45:33] 2026-01-23 12:45:00,035 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-23 07:45:33] 2026-01-23 12:45:00,035 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-23 07:45:33] 2026-01-23 12:45:00,035 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-23 07:45:33] 2026-01-23 12:45:00,035 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-23 07:45:33] 2026-01-23 12:45:00,035 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-23 07:45:33] 2026-01-23 12:45:00,035 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-23 07:45:33] 2026-01-23 12:45:00,035 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-23 07:45:33] 2026-01-23 12:45:00,035 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-23 07:45:33] 2026-01-23 12:45:00,036 | INFO     | job 6978070737 has completed (purged errors)
[2026-01-23 07:45:33] 2026-01-23 12:45:00,073 | INFO     | overall cleanup function is called
[2026-01-23 07:45:33] 2026-01-23 12:45:01,084 | INFO     | --- collectZombieJob: --- 10, [863181]
[2026-01-23 07:45:33] 2026-01-23 12:45:01,084 | INFO     | zombie collector waiting for pid 863181
[2026-01-23 07:45:33] 2026-01-23 12:45:01,085 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-23 07:45:33] 2026-01-23 12:45:01,085 | INFO     | collected zombie processes
[2026-01-23 07:45:33] 2026-01-23 12:45:01,085 | INFO     | will attempt to kill all subprocesses of pid=863181
[2026-01-23 07:45:33] 2026-01-23 12:45:01,579 | INFO     | process IDs to be killed: [863181] (in reverse order)
[2026-01-23 07:45:33] 2026-01-23 12:45:01,715 | WARNING  | found no corresponding commands to process id(s)
[2026-01-23 07:45:33] 2026-01-23 12:45:01,716 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-23 07:45:33] 2026-01-23 12:45:01,737 | INFO     | did not find any defunct processes belonging to 863181
[2026-01-23 07:45:33] 2026-01-23 12:45:01,796 | INFO     | did not find any defunct processes belonging to 863181
[2026-01-23 07:45:33] 2026-01-23 12:45:01,797 | INFO     | ready for new job
[2026-01-23 07:45:33] 2026-01-23 12:45:01,797 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-23 07:45:33] 2026-01-23 12:45:01,800 | INFO     | **************************************
[2026-01-23 07:45:33] 2026-01-23 12:45:01,801 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-23 07:45:33] 2026-01-23 12:45:01,801 | INFO     | **************************************
[2026-01-23 07:45:33] 2026-01-23 12:45:01,801 | INFO     | 
[2026-01-23 07:45:33] 2026-01-23 12:45:01,804 | INFO     | architecture information:
[2026-01-23 07:45:33] 2026-01-23 12:45:01,805 | INFO     | executing command: cat /etc/os-release
[2026-01-23 07:45:33] 2026-01-23 12:45:01,974 | INFO     | cat /etc/os-release:
[2026-01-23 07:45:33] NAME="CentOS Linux"
[2026-01-23 07:45:33] VERSION="7 (Core)"
[2026-01-23 07:45:33] ID="centos"
[2026-01-23 07:45:33] ID_LIKE="rhel fedora"
[2026-01-23 07:45:33] VERSION_ID="7"
[2026-01-23 07:45:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-23 07:45:33] ANSI_COLOR="0;31"
[2026-01-23 07:45:33] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-23 07:45:33] HOME_URL="https://www.centos.org/"
[2026-01-23 07:45:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-23 07:45:33] 
[2026-01-23 07:45:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-23 07:45:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-23 07:45:33] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-23 07:45:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-23 07:45:33] 
[2026-01-23 07:45:33] 2026-01-23 12:45:01,974 | INFO     | **************************************
[2026-01-23 07:45:33] 2026-01-23 12:45:02,477 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2026-01-23 07:45:33] 2026-01-23 12:45:02,593 | INFO     | sufficient remaining disk space (62137565184 B)
[2026-01-23 07:45:33] 2026-01-23 12:45:02,593 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-23 07:45:33] 2026-01-23 12:45:02,593 | INFO     | current server update state: UPDATING_FINAL
[2026-01-23 07:45:33] 2026-01-23 12:45:02,594 | INFO     | update_server=False
[2026-01-23 07:45:33] 2026-01-23 12:45:02,594 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-23 07:45:33] 2026-01-23 12:45:02,594 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-23 07:45:33] 2026-01-23 12:45:02,719 | INFO     | all payload control threads have been joined
[2026-01-23 07:45:33] 2026-01-23 12:45:03,009 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-23 07:45:33] 2026-01-23 12:45:03,010 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-23 07:45:33] 2026-01-23 12:45:03,010 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-23 07:45:33] 2026-01-23 12:45:03,010 | INFO     | will abort loop
[2026-01-23 07:45:33] 2026-01-23 12:45:03,031 | INFO     | all job control threads have been joined
[2026-01-23 07:45:33] 2026-01-23 12:45:03,600 | INFO     | [job] retrieve thread has finished
[2026-01-23 07:45:33] 2026-01-23 12:45:03,609 | INFO     | [payload] validate_post thread has finished
[2026-01-23 07:45:33] 2026-01-23 12:45:03,698 | INFO     | all data control threads have been joined
[2026-01-23 07:45:33] 2026-01-23 12:45:03,716 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-23 07:45:33] 2026-01-23 12:45:03,729 | INFO     | [payload] control thread has finished
[2026-01-23 07:45:33] 2026-01-23 12:45:03,902 | INFO     | [job] validate thread has finished
[2026-01-23 07:45:33] 2026-01-23 12:45:04,016 | INFO     | [job] job monitor thread has finished
[2026-01-23 07:45:33] 2026-01-23 12:45:04,038 | INFO     | [job] control thread has finished
[2026-01-23 07:45:33] 2026-01-23 12:45:04,252 | INFO     | [payload] execute_payloads thread has finished
[2026-01-23 07:45:33] 2026-01-23 12:45:04,396 | INFO     | [data] copytool_in thread has finished
[2026-01-23 07:45:33] 2026-01-23 12:45:04,480 | INFO     | [payload] validate_pre thread has finished
[2026-01-23 07:45:33] 2026-01-23 12:45:04,603 | INFO     | [data] copytool_out thread has finished
[2026-01-23 07:45:33] 2026-01-23 12:45:04,704 | INFO     | [data] control thread has finished
[2026-01-23 07:45:33] 2026-01-23 12:45:04,791 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-23 07:45:33] 2026-01-23 12:45:04,849 | INFO     | [payload] failed_post thread has finished
[2026-01-23 07:45:33] 2026-01-23 12:45:04,903 | INFO     | [job] create_data_payload thread has finished
[2026-01-23 07:45:33] 2026-01-23 12:45:05,010 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-23 07:45:33] 2026-01-23 12:45:05,797 | INFO     | [job] queue monitor thread has finished
[2026-01-23 07:45:33] 2026-01-23 12:45:09,019 | INFO     | [data] queue_monitor thread has finished
[2026-01-23 07:45:33] 2026-01-23 12:45:12,643 | INFO     | [monitor] cgroup control has ended
[2026-01-23 07:45:33] 2026-01-23 12:45:14,235 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140603220092736)>', '<ExcThread(monitor, started 140602842793728)>']
[2026-01-23 07:45:33] 2026-01-23 12:45:19,261 | INFO     | all workflow threads have been joined
[2026-01-23 07:45:33] 2026-01-23 12:45:19,262 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-23 07:45:33] 2026-01-23 12:45:19,262 | INFO     | traces error code: 0
[2026-01-23 07:45:33] 2026-01-23 12:45:19,263 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-23 07:45:33] 2026-01-23 12:45:32,379 | INFO     | PID=838698 has CPU usage=6.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-23 07:45:33] 2026-01-23 12:45:32,380 | INFO     | .. there are 9 such processes running
[2026-01-23 07:45:33] 2026-01-23 12:45:32,381 | INFO     | found 0 job(s) in 20 queues
[2026-01-23 07:45:33] 2026-01-23 12:45:32,381 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-23 07:45:33] 2026-01-23 12:45:32,382 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-23 07:45:33] 2026-01-23 12:45:32,382 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-23 07:45:33] 2026-01-23 12:45:32,382 | CRITICAL | thread 'MainThread' is not alive
[2026-01-23 07:45:33] 2026-01-23 12:45:32,382 | INFO     | [monitor] control thread has ended
[2026-01-23 07:45:33] 2026-01-23 12:45:32,989 [wrapper] ==== pilot stdout END ====
[2026-01-23 07:45:33] 2026-01-23 12:45:32,995 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-23 07:45:33] 2026-01-23 12:45:33,003 [wrapper] pilotpid: 838698
[2026-01-23 07:45:33] 2026-01-23 12:45:33,009 [wrapper] Pilot exit status: 0
[2026-01-23 07:45:33] 2026-01-23 12:45:33,032 [wrapper] pandaids: 6978070737
[2026-01-23 07:45:33] 2026-01-23 12:45:33,132 [wrapper] cleanup supervisor_pilot 1579864 838699
[2026-01-23 07:45:33] 2026-01-23 12:45:33,137 [wrapper] Test setup, not cleaning
[2026-01-23 07:45:33] 2026-01-23 12:45:33,141 [wrapper] apfmon messages muted
[2026-01-23 07:45:33] 2026-01-23 12:45:33,146 [wrapper] ==== wrapper stdout END ====
[2026-01-23 07:45:33] 2026-01-23 12:45:33,149 [wrapper] ==== wrapper stderr END ====
[2026-01-23 07:45:33]  *** Error codes and diagnostics ***
[2026-01-23 07:45:33]     "exeErrorCode": 0,
[2026-01-23 07:45:33]     "exeErrorDiag": "",
[2026-01-23 07:45:33]     "pilotErrorCode": 0,
[2026-01-23 07:45:33]     "pilotErrorDiag": "",
[2026-01-23 07:45:33]  *** Listing of results directory ***
[2026-01-23 07:45:33] total 674396
[2026-01-23 07:45:33] -rw-r--r--. 1 boincer umatlas    584422 Jan 22 19:29 pilot3.tar.gz
[2026-01-23 07:45:33] -rw-r--r--. 1 boincer umatlas      5111 Jan 22 19:30 queuedata.json
[2026-01-23 07:45:33] -rwx------. 1 boincer umatlas     36322 Jan 22 19:30 runpilot2-wrapper.sh
[2026-01-23 07:45:33] -rw-r--r--. 1 boincer umatlas       100 Jan 23 00:06 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-23 07:45:33] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 23 00:06 run_atlas
[2026-01-23 07:45:33] -rw-r--r--. 1 boincer umatlas       105 Jan 23 00:06 job.xml
[2026-01-23 07:45:33] -rw-r--r--. 2 boincer umatlas 496918440 Jan 23 00:06 EVNT.48310665._000048.pool.root.1
[2026-01-23 07:45:33] -rw-r--r--. 2 boincer umatlas     15845 Jan 23 00:06 start_atlas.sh
[2026-01-23 07:45:33] drwxrwx--x. 2 boincer umatlas      4096 Jan 23 00:06 shared
[2026-01-23 07:45:33] -rw-r--r--. 2 boincer umatlas    597749 Jan 23 00:06 input.tar.gz
[2026-01-23 07:45:33] -rw-r--r--. 1 boincer umatlas         0 Jan 23 00:06 boinc_lockfile
[2026-01-23 07:45:33] -rw-r--r--. 1 boincer umatlas      2523 Jan 23 00:06 pandaJob.out
[2026-01-23 07:45:33] -rw-------. 1 boincer umatlas        57 Jan 23 00:06 setup.sh.local
[2026-01-23 07:45:33] -rw-------. 1 boincer umatlas   1003905 Jan 23 00:07 agis_schedconf.cvmfs.json
[2026-01-23 07:45:33] -rw-------. 1 boincer umatlas       442 Jan 23 00:08 workernode_map.json
[2026-01-23 07:45:33] drwx------. 5 boincer umatlas      4096 Jan 23 00:08 pilot3
[2026-01-23 07:45:33] -rw-r--r--. 1 boincer umatlas      6613 Jan 23 07:37 init_data.xml
[2026-01-23 07:45:33] -rw-------. 1 boincer umatlas 181666943 Jan 23 07:44 HITS.48310670._002375.pool.root.1
[2026-01-23 07:45:33] -rw-r--r--. 1 boincer umatlas       530 Jan 23 07:44 boinc_task_state.xml
[2026-01-23 07:45:33] -rw-------. 1 boincer umatlas      1043 Jan 23 07:44 memory_monitor_summary.json
[2026-01-23 07:45:33] -rw-------. 1 boincer umatlas   1516246 Jan 23 07:44 agis_ddmendpoints.agis.ALL.json
[2026-01-23 07:45:33] -rw-------. 1 boincer umatlas    635033 Jan 23 07:44 log.48310670._002375.job.log.tgz.1
[2026-01-23 07:45:33] -rw-------. 1 boincer umatlas      6386 Jan 23 07:44 heartbeat.json
[2026-01-23 07:45:33] -rw-r--r--. 1 boincer umatlas      8192 Jan 23 07:45 boinc_mmap_file
[2026-01-23 07:45:33] -rw-r--r--. 1 boincer umatlas        27 Jan 23 07:45 wrapper_checkpoint.txt
[2026-01-23 07:45:33] -rw-------. 1 boincer umatlas        95 Jan 23 07:45 pilot_heartbeat.json
[2026-01-23 07:45:33] -rw-------. 1 boincer umatlas       891 Jan 23 07:45 pilotlog.txt
[2026-01-23 07:45:33] -rw-------. 1 boincer umatlas   3389505 Jan 23 07:45 log.48310670._002375.job.log.1
[2026-01-23 07:45:33] -rw-------. 1 boincer umatlas       357 Jan 23 07:45 output.list
[2026-01-23 07:45:33] -rw-r--r--. 1 boincer umatlas       620 Jan 23 07:45 runtime_log
[2026-01-23 07:45:33] -rw-------. 1 boincer umatlas   4044800 Jan 23 07:45 result.tar.gz
[2026-01-23 07:45:33] -rw-r--r--. 1 boincer umatlas      9342 Jan 23 07:45 runtime_log.err
[2026-01-23 07:45:33] -rw-------. 1 boincer umatlas       656 Jan 23 07:45 n4sNDmGFK38nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmwa1KDm84YZ1m.diag
[2026-01-23 07:45:33] -rw-r--r--. 1 boincer umatlas     21360 Jan 23 07:45 stderr.txt
[2026-01-23 07:45:33] HITS file was successfully produced:
[2026-01-23 07:45:33] -rw-------. 1 boincer umatlas 181666943 Jan 23 07:44 shared/HITS.pool.root.1
[2026-01-23 07:45:33]  *** Contents of shared directory: ***
[2026-01-23 07:45:33] total 667244
[2026-01-23 07:45:33] -rw-r--r--. 2 boincer umatlas 496918440 Jan 23 00:06 ATLAS.root_0
[2026-01-23 07:45:33] -rw-r--r--. 2 boincer umatlas     15845 Jan 23 00:06 start_atlas.sh
[2026-01-23 07:45:33] -rw-r--r--. 2 boincer umatlas    597749 Jan 23 00:06 input.tar.gz
[2026-01-23 07:45:33] -rw-------. 1 boincer umatlas 181666943 Jan 23 07:44 HITS.pool.root.1
[2026-01-23 07:45:33] -rw-------. 1 boincer umatlas   4044800 Jan 23 07:45 result.tar.gz
07:45:35 (825486): run_atlas exited; CPU time 52493.308630
07:45:35 (825486): called boinc_finish(0)

</stderr_txt>
]]>

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