Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:03:47 (971366): wrapper (7.7.26015): starting
00:03:47 (971366): wrapper: running run_atlas (--nthreads 8)
[2026-01-23 00:03:47] Arguments: --nthreads 8
[2026-01-23 00:03:47] Threads: 8
[2026-01-23 00:03:47] Checking for CVMFS
[2026-01-23 00:03:49] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-23 00:03:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-23 00:03:50] Running cvmfs_config stat atlas.cern.ch
[2026-01-23 00:03:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-23 00:03:52] 2.13.3.0 14259 111688 169080 155422 0 310 22015205 32935936 30680 16776704 0 528197254 99.705 383995525 32472 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-23 00:03:52] CVMFS is ok
[2026-01-23 00:03:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-23 00:03:52] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-23 00:03:52] Further information can be found at the LHC@home message board.
[2026-01-23 00:03:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-23 00:03:52] Checking for apptainer binary...
[2026-01-23 00:03:52] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-23 00:03:52] Running /usr/bin/apptainer --version
[2026-01-23 00:03:53] apptainer version 1.4.5-2.el9
[2026-01-23 00:03:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-23 00:03:57] c-4-36.aglt2.org
[2026-01-23 00:03:57] apptainer works
[2026-01-23 00:03:58] Set ATHENA_PROC_NUMBER=8
[2026-01-23 00:03:58] Set ATHENA_CORE_NUMBER=8
[2026-01-23 00:03:58] Starting ATLAS job with PandaID=6978070215
[2026-01-23 00:03:58] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-24 18:14:02]  *** The last 200 lines of the pilot log: ***
[2026-01-24 18:14:02] 2026-01-24 20:38:19,666 | INFO     | total number of processed events: 400 (read)
[2026-01-24 18:14:02] 2026-01-24 20:38:19,744 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-6978070215/memory_monitor_summary.json (trf name=prmon)
[2026-01-24 18:14:02] 2026-01-24 20:38:19,744 | INFO     | extracted standard info from prmon json
[2026-01-24 18:14:02] 2026-01-24 20:38:19,745 | INFO     | extracted standard memory fields from prmon json
[2026-01-24 18:14:02] 2026-01-24 20:38:19,745 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-24 18:14:02] 2026-01-24 20:38:19,745 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-24 18:14:02] 2026-01-24 20:38:19,745 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-24 18:14:02] 2026-01-24 20:38:20,083 | INFO     | fitting pss+swap vs Time
[2026-01-24 18:14:02] 2026-01-24 20:38:20,100 | INFO     | sum of square deviations: 3912115392845.4497
[2026-01-24 18:14:02] 2026-01-24 20:38:20,658 | INFO     | monitor loop #6384: job 0:6978070215 is in state 'finished'
[2026-01-24 18:14:02] 2026-01-24 20:38:20,659 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-24 18:14:02] 2026-01-24 20:38:21,043 | INFO     | time since job start (142196s) is within the limit (349056.0s)
[2026-01-24 18:14:02] 2026-01-24 20:38:21,244 | INFO     | sum of deviations: 5766567136772.119
[2026-01-24 18:14:02] 2026-01-24 20:38:21,244 | INFO     | mean x: 1769216078.420962
[2026-01-24 18:14:02] 2026-01-24 20:38:21,244 | INFO     | mean y: 2481212.7152061854
[2026-01-24 18:14:02] 2026-01-24 20:38:21,245 | INFO     | intersect: -2605392602.6454883
[2026-01-24 18:14:02] 2026-01-24 20:38:21,304 | INFO     | chi2: 14.680386581469238
[2026-01-24 18:14:02] 2026-01-24 20:38:21,347 | INFO     | sum of square deviations: 3886963588059.472
[2026-01-24 18:14:02] 2026-01-24 20:38:22,783 | INFO     | sum of deviations: 6341464973679.383
[2026-01-24 18:14:02] 2026-01-24 20:38:22,783 | INFO     | mean x: 1769215925.9268188
[2026-01-24 18:14:02] 2026-01-24 20:38:22,783 | INFO     | mean y: 2484696.672836849
[2026-01-24 18:14:02] 2026-01-24 20:38:22,783 | INFO     | intersect: -2883938232.424331
[2026-01-24 18:14:02] 2026-01-24 20:38:22,810 | INFO     | chi2: 11.898049303647126
[2026-01-24 18:14:02] 2026-01-24 20:38:22,810 | INFO     | current chi2=11.898049303647126 (change=18.952752111679413 %)
[2026-01-24 18:14:02] 2026-01-24 20:38:22,810 | INFO     | right removable region: 2322
[2026-01-24 18:14:02] 2026-01-24 20:38:22,839 | INFO     | sum of square deviations: 3886959724075.47
[2026-01-24 18:14:02] 2026-01-24 20:38:23,113 | INFO     | time since job start (142198s) is within the limit (349056.0s)
[2026-01-24 18:14:02] 2026-01-24 20:38:23,308 | INFO     | monitor loop #6385: job 0:6978070215 is in state 'finished'
[2026-01-24 18:14:02] 2026-01-24 20:38:23,309 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-24 18:14:02] 2026-01-24 20:38:24,305 | INFO     | sum of deviations: 4993823511120.15
[2026-01-24 18:14:02] 2026-01-24 20:38:24,305 | INFO     | mean x: 1769216230.9268188
[2026-01-24 18:14:02] 2026-01-24 20:38:24,305 | INFO     | mean y: 2485896.8420146364
[2026-01-24 18:14:02] 2026-01-24 20:38:24,306 | INFO     | intersect: -2270538327.086419
[2026-01-24 18:14:02] 2026-01-24 20:38:24,355 | INFO     | chi2: 10.719731701703058
[2026-01-24 18:14:02] 2026-01-24 20:38:24,356 | INFO     | current chi2=10.719731701703058 (change=26.97922740512594 %)
[2026-01-24 18:14:02] 2026-01-24 20:38:24,407 | INFO     | sum of square deviations: 3861912386892.7344
[2026-01-24 18:14:02] 2026-01-24 20:38:25,230 | INFO     | time since job start (142200s) is within the limit (349056.0s)
[2026-01-24 18:14:02] 2026-01-24 20:38:25,927 | INFO     | sum of deviations: 4384171074377.011
[2026-01-24 18:14:02] 2026-01-24 20:38:25,927 | INFO     | mean x: 1769216383.4318378
[2026-01-24 18:14:02] 2026-01-24 20:38:25,927 | INFO     | mean y: 2489608.6013805005
[2026-01-24 18:14:02] 2026-01-24 20:38:25,927 | INFO     | intersect: -2005983529.9610999
[2026-01-24 18:14:02] 2026-01-24 20:38:25,952 | INFO     | monitor loop #6386: job 0:6978070215 is in state 'finished'
[2026-01-24 18:14:02] 2026-01-24 20:38:25,953 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-24 18:14:02] 2026-01-24 20:38:25,960 | INFO     | chi2: 8.344021308143311
[2026-01-24 18:14:02] 2026-01-24 20:38:25,960 | INFO     | current chi2=8.344021308143311 (change=22.162032219354092 %)
[2026-01-24 18:14:02] 2026-01-24 20:38:25,960 | INFO     | left removable region: 20
[2026-01-24 18:14:02] 2026-01-24 20:38:25,990 | INFO     | sum of square deviations: 3782489314066.8228
[2026-01-24 18:14:02] 2026-01-24 20:38:26,884 | INFO     | sum of deviations: 4022438995971.7734
[2026-01-24 18:14:02] 2026-01-24 20:38:26,884 | INFO     | mean x: 1769216505.4461339
[2026-01-24 18:14:02] 2026-01-24 20:38:26,884 | INFO     | mean y: 2498866.086880973
[2026-01-24 18:14:02] 2026-01-24 20:38:26,884 | INFO     | intersect: -1878951383.450483
[2026-01-24 18:14:02] 2026-01-24 20:38:26,917 | INFO     | chi2: 2.7609073784161176
[2026-01-24 18:14:02] 2026-01-24 20:38:26,917 | INFO     | current memory leak: 1.06 B/s (using 2302 data points, chi2=2.76)
[2026-01-24 18:14:02] 2026-01-24 20:38:26,942 | INFO     | could have reported an average CPU frequency of 2600 MHz (82 samples)
[2026-01-24 18:14:02] 2026-01-24 20:38:26,943 | INFO     | ..............................
[2026-01-24 18:14:02] 2026-01-24 20:38:26,943 | INFO     | . Timing measurements:
[2026-01-24 18:14:02] 2026-01-24 20:38:26,943 | INFO     | . get job = 0 s
[2026-01-24 18:14:02] 2026-01-24 20:38:26,943 | INFO     | . initial setup = 100 s
[2026-01-24 18:14:02] 2026-01-24 20:38:26,943 | INFO     | . payload setup = 100 s
[2026-01-24 18:14:02] 2026-01-24 20:38:26,943 | INFO     | . stage-in = 2 s
[2026-01-24 18:14:02] 2026-01-24 20:38:26,943 | INFO     | . payload execution = 142056 s
[2026-01-24 18:14:02] 2026-01-24 20:38:26,944 | INFO     | . stage-out = 13 s
[2026-01-24 18:14:02] 2026-01-24 20:38:26,944 | INFO     | . log creation = 3 s
[2026-01-24 18:14:02] 2026-01-24 20:38:26,944 | INFO     | ..............................
[2026-01-24 18:14:02] 2026-01-24 20:38:27,385 | INFO     | time since job start (142202s) is within the limit (349056.0s)
[2026-01-24 18:14:02] 2026-01-24 20:38:27,962 | INFO     | 
[2026-01-24 18:14:02] 2026-01-24 20:38:27,963 | INFO     | job summary report
[2026-01-24 18:14:02] 2026-01-24 20:38:27,963 | INFO     | --------------------------------------------------
[2026-01-24 18:14:02] 2026-01-24 20:38:27,963 | INFO     | PanDA job id: 6978070215
[2026-01-24 18:14:02] 2026-01-24 20:38:27,963 | INFO     | task id: 48310670
[2026-01-24 18:14:02] 2026-01-24 20:38:27,963 | INFO     | errors: (none)
[2026-01-24 18:14:02] 2026-01-24 20:38:27,963 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-24 18:14:02] 2026-01-24 20:38:27,963 | INFO     | pilot state: finished 
[2026-01-24 18:14:02] 2026-01-24 20:38:27,963 | INFO     | transexitcode: 0
[2026-01-24 18:14:02] 2026-01-24 20:38:27,964 | INFO     | exeerrorcode: 0
[2026-01-24 18:14:02] 2026-01-24 20:38:27,964 | INFO     | exeerrordiag: 
[2026-01-24 18:14:02] 2026-01-24 20:38:27,964 | INFO     | exitcode: 0
[2026-01-24 18:14:02] 2026-01-24 20:38:27,964 | INFO     | exitmsg: OK
[2026-01-24 18:14:02] 2026-01-24 20:38:27,964 | INFO     | cpuconsumptiontime: 46483 s
[2026-01-24 18:14:02] 2026-01-24 20:38:27,964 | INFO     | nevents: 400
[2026-01-24 18:14:02] 2026-01-24 20:38:27,964 | INFO     | neventsw: 0
[2026-01-24 18:14:02] 2026-01-24 20:38:27,964 | INFO     | pid: 998226
[2026-01-24 18:14:02] 2026-01-24 20:38:27,964 | INFO     | pgrp: 998226
[2026-01-24 18:14:02] 2026-01-24 20:38:27,964 | INFO     | corecount: 8
[2026-01-24 18:14:02] 2026-01-24 20:38:27,964 | INFO     | event service: False
[2026-01-24 18:14:02] 2026-01-24 20:38:27,965 | INFO     | sizes: {0: 2283149, 1: 2283750, 3: 2283834, 7: 2283862, 8: 2283890, 11: 2283890, 12: 2284507, 142163: 2370315, 142179: 2379313, 142180: 2379369, 142189: 2379563}
[2026-01-24 18:14:02] 2026-01-24 20:38:27,965 | INFO     | --------------------------------------------------
[2026-01-24 18:14:02] 2026-01-24 20:38:27,965 | INFO     | 
[2026-01-24 18:14:02] 2026-01-24 20:38:27,965 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2026-01-24 18:14:02] 2026-01-24 20:38:27,989 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-24 18:14:02] 2026-01-24 20:38:27,989 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-24 18:14:02] 2026-01-24 20:38:27,989 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-24 18:14:02] 2026-01-24 20:38:27,989 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-24 18:14:02] 2026-01-24 20:38:27,989 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-24 18:14:02] 2026-01-24 20:38:27,990 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-24 18:14:02] 2026-01-24 20:38:27,990 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-24 18:14:02] 2026-01-24 20:38:27,990 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-24 18:14:02] 2026-01-24 20:38:27,990 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-24 18:14:02] 2026-01-24 20:38:27,990 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-24 18:14:02] 2026-01-24 20:38:27,990 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-24 18:14:02] 2026-01-24 20:38:27,990 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-24 18:14:02] 2026-01-24 20:38:27,990 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-24 18:14:02] 2026-01-24 20:38:27,990 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-24 18:14:02] 2026-01-24 20:38:27,990 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-24 18:14:02] 2026-01-24 20:38:27,991 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-24 18:14:02] 2026-01-24 20:38:27,991 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-24 18:14:02] 2026-01-24 20:38:27,991 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-24 18:14:02] 2026-01-24 20:38:27,991 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-24 18:14:02] 2026-01-24 20:38:27,991 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-24 18:14:02] 2026-01-24 20:38:27,991 | INFO     | job 6978070215 has completed (purged errors)
[2026-01-24 18:14:02] 2026-01-24 20:38:27,992 | INFO     | overall cleanup function is called
[2026-01-24 18:14:02] 2026-01-24 20:38:29,007 | INFO     | --- collectZombieJob: --- 10, [998226]
[2026-01-24 18:14:02] 2026-01-24 20:38:29,008 | INFO     | zombie collector waiting for pid 998226
[2026-01-24 18:14:02] 2026-01-24 20:38:29,008 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-24 18:14:02] 2026-01-24 20:38:29,008 | INFO     | collected zombie processes
[2026-01-24 18:14:02] 2026-01-24 20:38:29,008 | INFO     | will attempt to kill all subprocesses of pid=998226
[2026-01-24 18:14:02] 2026-01-24 20:38:30,279 | INFO     | process IDs to be killed: [998226] (in reverse order)
[2026-01-24 18:14:02] 2026-01-24 20:38:31,300 | WARNING  | found no corresponding commands to process id(s)
[2026-01-24 18:14:02] 2026-01-24 20:38:31,301 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-24 18:14:02] 2026-01-24 20:38:31,453 | INFO     | did not find any defunct processes belonging to 998226
[2026-01-24 18:14:02] 2026-01-24 20:38:31,550 | INFO     | did not find any defunct processes belonging to 998226
[2026-01-24 18:14:02] 2026-01-24 20:38:31,550 | INFO     | ready for new job
[2026-01-24 18:14:02] 2026-01-24 20:38:31,550 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-24 18:14:02] 2026-01-24 20:38:31,610 | INFO     | **************************************
[2026-01-24 18:14:02] 2026-01-24 20:38:31,620 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-24 18:14:02] 2026-01-24 20:38:31,620 | INFO     | **************************************
[2026-01-24 18:14:02] 2026-01-24 20:38:31,620 | INFO     | 
[2026-01-24 18:14:02] 2026-01-24 20:38:31,645 | INFO     | architecture information:
[2026-01-24 18:14:02] 2026-01-24 20:38:31,645 | INFO     | executing command: cat /etc/os-release
[2026-01-24 18:14:02] 2026-01-24 20:38:31,882 | INFO     | cat /etc/os-release:
[2026-01-24 18:14:02] NAME="CentOS Linux"
[2026-01-24 18:14:02] VERSION="7 (Core)"
[2026-01-24 18:14:02] ID="centos"
[2026-01-24 18:14:02] ID_LIKE="rhel fedora"
[2026-01-24 18:14:02] VERSION_ID="7"
[2026-01-24 18:14:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-24 18:14:02] ANSI_COLOR="0;31"
[2026-01-24 18:14:02] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-24 18:14:02] HOME_URL="https://www.centos.org/"
[2026-01-24 18:14:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-24 18:14:02] 
[2026-01-24 18:14:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-24 18:14:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-24 18:14:02] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-24 18:14:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-24 18:14:02] 
[2026-01-24 18:14:02] 2026-01-24 20:38:31,882 | INFO     | **************************************
[2026-01-24 18:14:02] 2026-01-24 20:38:32,387 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2026-01-24 18:14:02] 2026-01-24 20:38:32,515 | INFO     | sufficient remaining disk space (72099037184 B)
[2026-01-24 18:14:02] 2026-01-24 20:38:32,515 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-24 18:14:02] 2026-01-24 20:38:32,515 | INFO     | current server update state: UPDATING_FINAL
[2026-01-24 18:14:02] 2026-01-24 20:38:32,516 | INFO     | update_server=False
[2026-01-24 18:14:02] 2026-01-24 20:38:32,516 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-24 18:14:02] 2026-01-24 20:38:32,540 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-24 18:14:02] 2026-01-24 20:38:32,541 | INFO     | aborting loop
[2026-01-24 18:14:02] 2026-01-24 20:38:32,740 | INFO     | all job control threads have been joined
[2026-01-24 18:14:02] 2026-01-24 20:38:33,000 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-24 18:14:02] 2026-01-24 20:38:33,240 | INFO     | all data control threads have been joined
[2026-01-24 18:14:02] 2026-01-24 20:38:33,522 | INFO     | [job] retrieve thread has finished
[2026-01-24 18:14:02] 2026-01-24 20:38:33,547 | INFO     | [job] job monitor thread has finished
[2026-01-24 18:14:02] 2026-01-24 20:38:33,578 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-24 18:14:02] 2026-01-24 20:38:33,746 | INFO     | [job] control thread has finished
[2026-01-24 18:14:02] 2026-01-24 20:38:33,803 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-24 18:14:02] 2026-01-24 20:38:33,884 | INFO     | [payload] failed_post thread has finished
[2026-01-24 18:14:02] 2026-01-24 20:38:33,962 | INFO     | all payload control threads have been joined
[2026-01-24 18:14:02] 2026-01-24 20:38:34,006 | INFO     | [job] queue monitor thread has finished
[2026-01-24 18:14:02] 2026-01-24 20:38:34,234 | INFO     | [payload] execute_payloads thread has finished
[2026-01-24 18:14:02] 2026-01-24 20:38:34,235 | INFO     | [job] validate thread has finished
[2026-01-24 18:14:02] 2026-01-24 20:38:34,246 | INFO     | [data] control thread has finished
[2026-01-24 18:14:02] 2026-01-24 20:38:34,327 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-24 18:14:02] 2026-01-24 20:38:34,576 | INFO     | [payload] validate_post thread has finished
[2026-01-24 18:14:02] 2026-01-24 20:38:34,978 | INFO     | [job] create_data_payload thread has finished
[2026-01-24 18:14:02] 2026-01-24 20:38:34,988 | INFO     | [data] copytool_in thread has finished
[2026-01-24 18:14:02] 2026-01-24 20:38:35,013 | INFO     | [payload] validate_pre thread has finished
[2026-01-24 18:14:02] 2026-01-24 20:38:34,989 | INFO     | [payload] control thread has finished
[2026-01-24 18:14:02] 2026-01-24 20:38:35,810 | INFO     | [data] copytool_out thread has finished
[2026-01-24 18:14:02] 2026-01-24 20:38:38,336 | INFO     | [data] queue_monitor thread has finished
[2026-01-24 18:14:02] 2026-01-24 20:39:04,280 | INFO     | PID=982606 has CPU usage=5.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-24 18:14:02] 2026-01-24 20:39:04,283 | INFO     | .. there are 41 such processes running
[2026-01-24 18:14:02] 2026-01-24 20:39:04,285 | INFO     | found 0 job(s) in 20 queues
[2026-01-24 18:14:02] 2026-01-24 20:39:04,285 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-24 18:14:02] 2026-01-24 20:39:04,285 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-24 18:14:02] 2026-01-24 20:39:12,878 | INFO     | [monitor] cgroup control has ended
[2026-01-24 18:14:02] 2026-01-24 20:39:14,856 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140585009526592)>', '<ExcThread(monitor, started 140584496895744)>']
[2026-01-24 18:14:02] 2026-01-24 20:39:15,349 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-24 18:14:02] 2026-01-24 20:39:15,350 | INFO     | [monitor] control thread has ended
[2026-01-24 18:14:02] 2026-01-24 20:39:19,888 | INFO     | all workflow threads have been joined
[2026-01-24 18:14:02] 2026-01-24 20:39:19,894 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-24 18:14:02] 2026-01-24 20:39:19,895 | INFO     | traces error code: 0
[2026-01-24 18:14:02] 2026-01-24 20:39:19,895 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-24 18:14:02] 2026-01-24 20:39:22,194 [wrapper] ==== pilot stdout END ====
[2026-01-24 18:14:02] 2026-01-24 20:39:22,361 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-24 18:14:02] 2026-01-24 20:39:22,406 [wrapper] pilotpid: 982606
[2026-01-24 18:14:02] 2026-01-24 20:39:22,472 [wrapper] Pilot exit status: 0
[2026-01-24 18:14:02] 2026-01-24 20:39:22,767 [wrapper] pandaids: 6978070215
[2026-01-24 18:14:02] 2026-01-24 20:39:25,274 [wrapper] cleanup supervisor_pilot 1834605 982607
[2026-01-24 18:14:02] 2026-01-24 20:39:25,337 [wrapper] Test setup, not cleaning
[2026-01-24 18:14:02] 2026-01-24 20:39:25,382 [wrapper] apfmon messages muted
[2026-01-24 18:14:02] 2026-01-24 20:39:25,446 [wrapper] ==== wrapper stdout END ====
[2026-01-24 18:14:02] 2026-01-24 20:39:25,517 [wrapper] ==== wrapper stderr END ====
[2026-01-24 18:14:02]  *** Error codes and diagnostics ***
[2026-01-24 18:14:02]     "exeErrorCode": 0,
[2026-01-24 18:14:02]     "exeErrorDiag": "",
[2026-01-24 18:14:02]     "pilotErrorCode": 0,
[2026-01-24 18:14:02]     "pilotErrorDiag": "",
[2026-01-24 18:14:02]  *** Listing of results directory ***
[2026-01-24 18:14:02] total 691964
[2026-01-24 18:14:02] -rw-r--r--. 1 boincer umatlas    584422 Jan 22 19:29 pilot3.tar.gz
[2026-01-24 18:14:02] -rwx------. 1 boincer umatlas     36322 Jan 22 19:30 runpilot2-wrapper.sh
[2026-01-24 18:14:02] -rw-r--r--. 1 boincer umatlas      5111 Jan 22 19:30 queuedata.json
[2026-01-24 18:14:02] -rw-r--r--. 1 boincer umatlas       100 Jan 23 00:03 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-24 18:14:02] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 23 00:03 run_atlas
[2026-01-24 18:14:02] -rw-r--r--. 1 boincer umatlas       105 Jan 23 00:03 job.xml
[2026-01-24 18:14:02] -rw-r--r--. 2 boincer umatlas 491445821 Jan 23 00:03 EVNT.48310665._000044.pool.root.1
[2026-01-24 18:14:02] -rw-r--r--. 2 boincer umatlas     15845 Jan 23 00:03 start_atlas.sh
[2026-01-24 18:14:02] drwxrwx--x. 2 boincer umatlas      4096 Jan 23 00:03 shared
[2026-01-24 18:14:02] -rw-r--r--. 2 boincer umatlas    597749 Jan 23 00:03 input.tar.gz
[2026-01-24 18:14:02] -rw-r--r--. 1 boincer umatlas         0 Jan 23 00:03 boinc_lockfile
[2026-01-24 18:14:02] -rw-r--r--. 1 boincer umatlas      2522 Jan 23 00:03 pandaJob.out
[2026-01-24 18:14:02] -rw-------. 1 boincer umatlas        57 Jan 23 00:04 setup.sh.local
[2026-01-24 18:14:02] -rw-------. 1 boincer umatlas       440 Jan 23 00:08 workernode_map.json
[2026-01-24 18:14:02] -rw-------. 1 boincer umatlas   1003905 Jan 23 00:08 agis_schedconf.cvmfs.json
[2026-01-24 18:14:02] drwx------. 5 boincer umatlas      4096 Jan 23 00:08 pilot3
[2026-01-24 18:14:02] -rw-------. 1 boincer umatlas 180078331 Jan 24 15:33 HITS.48310670._002157.pool.root.1
[2026-01-24 18:14:02] -rw-r--r--. 1 boincer umatlas       530 Jan 24 15:34 boinc_task_state.xml
[2026-01-24 18:14:02] -rw-------. 1 boincer umatlas      1053 Jan 24 15:37 memory_monitor_summary.json
[2026-01-24 18:14:02] -rw-------. 1 boincer umatlas   1516246 Jan 24 15:38 agis_ddmendpoints.agis.ALL.json
[2026-01-24 18:14:02] -rw-------. 1 boincer umatlas   1843100 Jan 24 15:38 log.48310670._002157.job.log.tgz.1
[2026-01-24 18:14:02] -rw-------. 1 boincer umatlas      6404 Jan 24 15:38 heartbeat.json
[2026-01-24 18:14:02] -rw-------. 1 boincer umatlas        95 Jan 24 15:39 pilot_heartbeat.json
[2026-01-24 18:14:02] -rw-------. 1 boincer umatlas      4819 Jan 24 15:39 pilotlog.txt
[2026-01-24 18:14:02] -rw-------. 1 boincer umatlas  14711543 Jan 24 15:39 log.48310670._002157.job.log.1
[2026-01-24 18:14:02] -rw-------. 1 boincer umatlas       357 Jan 24 15:39 output.list
[2026-01-24 18:14:02] -rw-r--r--. 1 boincer umatlas       620 Jan 24 15:39 runtime_log
[2026-01-24 18:14:02] -rw-------. 1 boincer umatlas  16568320 Jan 24 15:39 result.tar.gz
[2026-01-24 18:14:02] -rw-r--r--. 1 boincer umatlas      9333 Jan 24 15:39 runtime_log.err
[2026-01-24 18:14:02] -rw-------. 1 boincer umatlas       660 Jan 24 15:39 ElNMDm4EK38n9Rq4apOajLDm4fhM0noT9bVo0NGKDmIyuKDmnyo1hn.diag
[2026-01-24 18:14:02] -rw-r--r--. 1 boincer umatlas      6659 Jan 24 18:10 init_data.xml
[2026-01-24 18:14:02] -rw-r--r--. 1 boincer umatlas      8192 Jan 24 18:14 boinc_mmap_file
[2026-01-24 18:14:02] -rw-r--r--. 1 boincer umatlas        26 Jan 24 18:14 wrapper_checkpoint.txt
[2026-01-24 18:14:02] -rw-r--r--. 1 boincer umatlas     21382 Jan 24 18:14 stderr.txt
[2026-01-24 18:14:02] HITS file was successfully produced:
[2026-01-24 18:14:02] -rw-------. 1 boincer umatlas 180078331 Jan 24 15:33 shared/HITS.pool.root.1
[2026-01-24 18:14:02]  *** Contents of shared directory: ***
[2026-01-24 18:14:02] total 672576
[2026-01-24 18:14:02] -rw-r--r--. 2 boincer umatlas 491445821 Jan 23 00:03 ATLAS.root_0
[2026-01-24 18:14:02] -rw-r--r--. 2 boincer umatlas     15845 Jan 23 00:03 start_atlas.sh
[2026-01-24 18:14:02] -rw-r--r--. 2 boincer umatlas    597749 Jan 23 00:03 input.tar.gz
[2026-01-24 18:14:02] -rw-------. 1 boincer umatlas 180078331 Jan 24 15:33 HITS.pool.root.1
[2026-01-24 18:14:02] -rw-------. 1 boincer umatlas  16568320 Jan 24 15:39 result.tar.gz
18:14:04 (971366): run_atlas exited; CPU time 53854.435927
18:14:04 (971366): called boinc_finish(0)

</stderr_txt>
]]>

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