Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:03:43 (971172): wrapper (7.7.26015): starting
00:03:43 (971172): wrapper: running run_atlas (--nthreads 8)
[2026-01-23 00:03:43] Arguments: --nthreads 8
[2026-01-23 00:03:43] Threads: 8
[2026-01-23 00:03:43] Checking for CVMFS
[2026-01-23 00:03:45] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-23 00:03:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-23 00:03:46] Running cvmfs_config stat atlas.cern.ch
[2026-01-23 00:03:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-23 00:03:48] 2.13.3.0 14259 111687 169080 155422 0 310 22015190 32935937 30689 16776704 0 528197239 99.705 383995518 32472 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-23 00:03:48] CVMFS is ok
[2026-01-23 00:03:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-23 00:03:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-23 00:03:48] Further information can be found at the LHC@home message board.
[2026-01-23 00:03:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-23 00:03:48] Checking for apptainer binary...
[2026-01-23 00:03:48] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-23 00:03:48] Running /usr/bin/apptainer --version
[2026-01-23 00:03:48] apptainer version 1.4.5-2.el9
[2026-01-23 00:03:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-23 00:03:51] c-4-36.aglt2.org
[2026-01-23 00:03:51] apptainer works
[2026-01-23 00:03:52] Set ATHENA_PROC_NUMBER=8
[2026-01-23 00:03:52] Set ATHENA_CORE_NUMBER=8
[2026-01-23 00:03:52] Starting ATLAS job with PandaID=6980223746
[2026-01-23 00:03:52] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-24 18:13:54]  *** The last 200 lines of the pilot log: ***
[2026-01-24 18:13:54] 2026-01-24 08:35:29,600 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-24 18:13:54] 2026-01-24 08:35:29,962 | INFO     | time since job start (98838s) is within the limit (349056.0s)
[2026-01-24 18:13:54] 2026-01-24 08:35:30,639 | INFO     | job 6980223746 has state=finished
[2026-01-24 18:13:54] 2026-01-24 08:35:30,640 | INFO     | preparing for final server update for job 6980223746 in state='finished'
[2026-01-24 18:13:54] 2026-01-24 08:35:30,640 | INFO     | reading metadata from: /tmp/boinchome/slots/1/PanDA_Pilot-6980223746/jobReport.json
[2026-01-24 18:13:54] 2026-01-24 08:35:30,643 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/1/workernode_map.json
[2026-01-24 18:13:54] 2026-01-24 08:35:30,643 | INFO     | this job has now completed (state=finished)
[2026-01-24 18:13:54] 2026-01-24 08:35:30,819 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-24 18:13:54] 2026-01-24 08:35:30,820 | INFO     | log transfer has been attempted: DONE
[2026-01-24 18:13:54] 2026-01-24 08:35:30,820 | INFO     | job 6980223746 has finished - writing final server update
[2026-01-24 18:13:54] 2026-01-24 08:35:30,820 | INFO     | total number of processed events: 350 (read)
[2026-01-24 18:13:54] 2026-01-24 08:35:30,955 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6980223746/memory_monitor_summary.json (trf name=prmon)
[2026-01-24 18:13:54] 2026-01-24 08:35:31,149 | INFO     | extracted standard info from prmon json
[2026-01-24 18:13:54] 2026-01-24 08:35:31,149 | INFO     | extracted standard memory fields from prmon json
[2026-01-24 18:13:54] 2026-01-24 08:35:31,149 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-24 18:13:54] 2026-01-24 08:35:31,939 | INFO     | fitting pss+swap vs Time
[2026-01-24 18:13:54] 2026-01-24 08:35:32,107 | INFO     | sum of square deviations: 1309316348130.2976
[2026-01-24 18:13:54] 2026-01-24 08:35:32,453 | INFO     | monitor loop #2782: job 0:6980223746 is in state 'finished'
[2026-01-24 18:13:54] 2026-01-24 08:35:32,454 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-24 18:13:54] 2026-01-24 08:35:32,454 | INFO     | time since job start (98841s) is within the limit (349056.0s)
[2026-01-24 18:13:54] 2026-01-24 08:35:35,217 | INFO     | sum of deviations: 1623614658193.575
[2026-01-24 18:13:54] 2026-01-24 08:35:35,217 | INFO     | mean x: 1769194419.059406
[2026-01-24 18:13:54] 2026-01-24 08:35:35,217 | INFO     | mean y: 2774490.473391089
[2026-01-24 18:13:54] 2026-01-24 08:35:35,217 | INFO     | intersect: -2191110888.015185
[2026-01-24 18:13:54] 2026-01-24 08:35:35,219 | INFO     | chi2: 58.378380152290596
[2026-01-24 18:13:54] 2026-01-24 08:35:35,221 | INFO     | sum of square deviations: 1297211971046.145
[2026-01-24 18:13:54] 2026-01-24 08:35:35,336 | INFO     | sum of deviations: 2146176660512.0845
[2026-01-24 18:13:54] 2026-01-24 08:35:35,337 | INFO     | mean x: 1769194266.5884545
[2026-01-24 18:13:54] 2026-01-24 08:35:35,337 | INFO     | mean y: 2781072.0800744877
[2026-01-24 18:13:54] 2026-01-24 08:35:35,337 | INFO     | intersect: -2924268267.2825723
[2026-01-24 18:13:54] 2026-01-24 08:35:35,356 | INFO     | chi2: 54.88742183594255
[2026-01-24 18:13:54] 2026-01-24 08:35:35,356 | INFO     | current chi2=54.88742183594255 (change=5.979882119444306 %)
[2026-01-24 18:13:54] 2026-01-24 08:35:35,356 | INFO     | right removable region: 1610
[2026-01-24 18:13:54] 2026-01-24 08:35:35,358 | INFO     | sum of square deviations: 1297189825438.318
[2026-01-24 18:13:54] 2026-01-24 08:35:35,513 | INFO     | monitor loop #2783: job 0:6980223746 is in state 'finished'
[2026-01-24 18:13:54] 2026-01-24 08:35:35,514 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-24 18:13:54] 2026-01-24 08:35:35,706 | INFO     | sum of deviations: 964221922354.1447
[2026-01-24 18:13:54] 2026-01-24 08:35:35,706 | INFO     | mean x: 1769194571.6697702
[2026-01-24 18:13:54] 2026-01-24 08:35:35,707 | INFO     | mean y: 2782788.3029174428
[2026-01-24 18:13:54] 2026-01-24 08:35:35,707 | INFO     | intersect: -1312287803.1099656
[2026-01-24 18:13:54] 2026-01-24 08:35:35,752 | INFO     | chi2: 53.72522749403833
[2026-01-24 18:13:54] 2026-01-24 08:35:35,752 | INFO     | current chi2=53.72522749403833 (change=7.970677922398112 %)
[2026-01-24 18:13:54] 2026-01-24 08:35:35,752 | INFO     | left removable region: 10
[2026-01-24 18:13:54] 2026-01-24 08:35:35,840 | INFO     | sum of square deviations: 1270801597492.347
[2026-01-24 18:13:54] 2026-01-24 08:35:36,836 | INFO     | sum of deviations: 994729601966.1606
[2026-01-24 18:13:54] 2026-01-24 08:35:36,837 | INFO     | mean x: 1769194541.316875
[2026-01-24 18:13:54] 2026-01-24 08:35:36,837 | INFO     | mean y: 2798240.60125
[2026-01-24 18:13:54] 2026-01-24 08:35:36,837 | INFO     | intersect: -1382052223.3559592
[2026-01-24 18:13:54] 2026-01-24 08:35:36,997 | INFO     | chi2: 45.88649703000553
[2026-01-24 18:13:54] 2026-01-24 08:35:36,998 | INFO     | current memory leak: 0.78 B/s (using 1600 data points, chi2=45.89)
[2026-01-24 18:13:54] 2026-01-24 08:35:37,025 | INFO     | could have reported an average CPU frequency of 2600 MHz (58 samples)
[2026-01-24 18:13:54] 2026-01-24 08:35:37,025 | INFO     | ..............................
[2026-01-24 18:13:54] 2026-01-24 08:35:37,025 | INFO     | . Timing measurements:
[2026-01-24 18:13:54] 2026-01-24 08:35:37,025 | INFO     | . get job = 1 s
[2026-01-24 18:13:54] 2026-01-24 08:35:37,026 | INFO     | . initial setup = 86 s
[2026-01-24 18:13:54] 2026-01-24 08:35:37,026 | INFO     | . payload setup = 126 s
[2026-01-24 18:13:54] 2026-01-24 08:35:37,026 | INFO     | . stage-in = 0 s
[2026-01-24 18:13:54] 2026-01-24 08:35:37,026 | INFO     | . payload execution = 98636 s
[2026-01-24 18:13:54] 2026-01-24 08:35:37,026 | INFO     | . stage-out = 22 s
[2026-01-24 18:13:54] 2026-01-24 08:35:37,026 | INFO     | . log creation = 4 s
[2026-01-24 18:13:54] 2026-01-24 08:35:37,026 | INFO     | ..............................
[2026-01-24 18:13:54] 2026-01-24 08:35:37,772 | INFO     | 
[2026-01-24 18:13:54] 2026-01-24 08:35:37,955 | INFO     | job summary report
[2026-01-24 18:13:54] 2026-01-24 08:35:37,956 | INFO     | --------------------------------------------------
[2026-01-24 18:13:54] 2026-01-24 08:35:37,956 | INFO     | PanDA job id: 6980223746
[2026-01-24 18:13:54] 2026-01-24 08:35:37,956 | INFO     | task id: 47961985
[2026-01-24 18:13:54] 2026-01-24 08:35:37,956 | INFO     | errors: (none)
[2026-01-24 18:13:54] 2026-01-24 08:35:37,956 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-24 18:13:54] 2026-01-24 08:35:37,956 | INFO     | pilot state: finished 
[2026-01-24 18:13:54] 2026-01-24 08:35:37,956 | INFO     | transexitcode: 0
[2026-01-24 18:13:54] 2026-01-24 08:35:37,956 | INFO     | exeerrorcode: 0
[2026-01-24 18:13:54] 2026-01-24 08:35:37,957 | INFO     | exeerrordiag: 
[2026-01-24 18:13:54] 2026-01-24 08:35:37,957 | INFO     | exitcode: 0
[2026-01-24 18:13:54] 2026-01-24 08:35:37,957 | INFO     | exitmsg: OK
[2026-01-24 18:13:54] 2026-01-24 08:35:37,957 | INFO     | cpuconsumptiontime: 146837 s
[2026-01-24 18:13:54] 2026-01-24 08:35:37,957 | INFO     | nevents: 350
[2026-01-24 18:13:54] 2026-01-24 08:35:37,957 | INFO     | neventsw: 0
[2026-01-24 18:13:54] 2026-01-24 08:35:37,957 | INFO     | pid: 1001704
[2026-01-24 18:13:54] 2026-01-24 08:35:37,957 | INFO     | pgrp: 1001704
[2026-01-24 18:13:54] 2026-01-24 08:35:37,957 | INFO     | corecount: 8
[2026-01-24 18:13:54] 2026-01-24 08:35:37,958 | INFO     | event service: False
[2026-01-24 18:13:54] 2026-01-24 08:35:37,958 | INFO     | sizes: {0: 2283668, 2: 2284269, 4: 2284353, 6: 2284381, 7: 2284782, 8: 2284782, 9: 2285026, 25: 2285026, 98774: 2345943, 98780: 2345942, 98805: 2354992, 98810: 235
[2026-01-24 18:13:54] 2026-01-24 08:35:37,958 | INFO     | --------------------------------------------------
[2026-01-24 18:13:54] 2026-01-24 08:35:37,958 | INFO     | 
[2026-01-24 18:13:54] 2026-01-24 08:35:37,958 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2026-01-24 18:13:54] 2026-01-24 08:35:38,725 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-24 18:13:54] 2026-01-24 08:35:38,726 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-24 18:13:54] 2026-01-24 08:35:38,726 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-24 18:13:54] 2026-01-24 08:35:38,726 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-24 18:13:54] 2026-01-24 08:35:38,726 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-24 18:13:54] 2026-01-24 08:35:38,726 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-24 18:13:54] 2026-01-24 08:35:38,726 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-24 18:13:54] 2026-01-24 08:35:38,726 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-24 18:13:54] 2026-01-24 08:35:38,726 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-24 18:13:54] 2026-01-24 08:35:38,727 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-24 18:13:54] 2026-01-24 08:35:38,727 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-24 18:13:54] 2026-01-24 08:35:38,727 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-24 18:13:54] 2026-01-24 08:35:38,727 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-24 18:13:54] 2026-01-24 08:35:38,727 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-24 18:13:54] 2026-01-24 08:35:38,727 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-24 18:13:54] 2026-01-24 08:35:38,728 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-24 18:13:54] 2026-01-24 08:35:38,728 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-24 18:13:54] 2026-01-24 08:35:38,728 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-24 18:13:54] 2026-01-24 08:35:38,728 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-24 18:13:54] 2026-01-24 08:35:38,728 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-24 18:13:54] 2026-01-24 08:35:38,728 | INFO     | job 6980223746 has completed (purged errors)
[2026-01-24 18:13:54] 2026-01-24 08:35:38,729 | INFO     | overall cleanup function is called
[2026-01-24 18:13:54] 2026-01-24 08:35:39,916 | INFO     | --- collectZombieJob: --- 10, [1001704]
[2026-01-24 18:13:54] 2026-01-24 08:35:39,917 | INFO     | zombie collector waiting for pid 1001704
[2026-01-24 18:13:54] 2026-01-24 08:35:39,917 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-24 18:13:54] 2026-01-24 08:35:39,917 | INFO     | collected zombie processes
[2026-01-24 18:13:54] 2026-01-24 08:35:39,917 | INFO     | will attempt to kill all subprocesses of pid=1001704
[2026-01-24 18:13:54] 2026-01-24 08:35:46,564 | INFO     | PID=982880 has CPU usage=9.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-24 18:13:54] 2026-01-24 08:35:46,564 | INFO     | .. there are 44 such processes running
[2026-01-24 18:13:54] 2026-01-24 08:35:47,853 | INFO     | process IDs to be killed: [1001704] (in reverse order)
[2026-01-24 18:13:54] 2026-01-24 08:35:49,454 | WARNING  | found no corresponding commands to process id(s)
[2026-01-24 18:13:54] 2026-01-24 08:35:49,455 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-24 18:13:54] 2026-01-24 08:35:49,928 | INFO     | did not find any defunct processes belonging to 1001704
[2026-01-24 18:13:54] 2026-01-24 08:35:50,182 | INFO     | did not find any defunct processes belonging to 1001704
[2026-01-24 18:13:54] 2026-01-24 08:35:50,182 | INFO     | ready for new job
[2026-01-24 18:13:54] 2026-01-24 08:35:50,182 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-24 18:13:54] 2026-01-24 08:35:50,236 | INFO     | **************************************
[2026-01-24 18:13:54] 2026-01-24 08:35:50,237 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-24 18:13:54] 2026-01-24 08:35:50,237 | INFO     | **************************************
[2026-01-24 18:13:54] 2026-01-24 08:35:50,237 | INFO     | 
[2026-01-24 18:13:54] 2026-01-24 08:35:50,239 | INFO     | architecture information:
[2026-01-24 18:13:54] 2026-01-24 08:35:50,291 | INFO     | executing command: cat /etc/os-release
[2026-01-24 18:13:54] 2026-01-24 08:35:50,574 | INFO     | cat /etc/os-release:
[2026-01-24 18:13:54] NAME="CentOS Linux"
[2026-01-24 18:13:54] VERSION="7 (Core)"
[2026-01-24 18:13:54] ID="centos"
[2026-01-24 18:13:54] ID_LIKE="rhel fedora"
[2026-01-24 18:13:54] VERSION_ID="7"
[2026-01-24 18:13:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-24 18:13:54] ANSI_COLOR="0;31"
[2026-01-24 18:13:54] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-24 18:13:54] HOME_URL="https://www.centos.org/"
[2026-01-24 18:13:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-24 18:13:54] 
[2026-01-24 18:13:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-24 18:13:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-24 18:13:54] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-24 18:13:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-24 18:13:54] 
[2026-01-24 18:13:54] 2026-01-24 08:35:50,574 | INFO     | **************************************
[2026-01-24 18:13:54] 2026-01-24 08:35:51,081 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2026-01-24 18:13:54] 2026-01-24 08:35:51,303 | INFO     | sufficient remaining disk space (72359084032 B)
[2026-01-24 18:13:54] 2026-01-24 08:35:51,303 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-24 18:13:54] 2026-01-24 08:35:51,303 | INFO     | current server update state: UPDATING_FINAL
[2026-01-24 18:13:54] 2026-01-24 08:35:51,304 | INFO     | update_server=False
[2026-01-24 18:13:54] 2026-01-24 08:35:51,304 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-24 18:13:54] 2026-01-24 08:35:51,324 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-24 18:13:54] 2026-01-24 08:35:51,392 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-24 18:13:54] 2026-01-24 08:35:51,393 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-24 18:13:54] 2026-01-24 08:35:51,393 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-24 18:13:54] 2026-01-24 08:35:51,393 | INFO     | will abort loop
[2026-01-24 18:13:54] 2026-01-24 08:35:51,403 | INFO     | all payload control threads have been joined
[2026-01-24 18:13:54] 2026-01-24 08:35:52,313 | INFO     | all data control threads have been joined
[2026-01-24 18:13:54] 2026-01-24 08:35:52,323 | INFO     | [job] retrieve thread has finished
[2026-01-24 18:13:54] 2026-01-24 08:35:52,333 | INFO     | [job] queue monitor thread has finished
[2026-01-24 18:13:54] 2026-01-24 08:35:52,355 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-24 18:13:54] 2026-01-24 08:35:52,379 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-24 18:13:54] 2026-01-24 08:35:52,388 | INFO     | [job] validate thread has finished
[2026-01-24 18:13:54] 2026-01-24 08:35:52,399 | INFO     | [job] job monitor thread has finished
[2026-01-24 18:13:54] 2026-01-24 08:35:52,428 | INFO     | [payload] control thread has finished
[2026-01-24 18:13:54] 2026-01-24 08:35:52,580 | INFO     | all job control threads have been joined
[2026-01-24 18:13:54] 2026-01-24 08:35:53,284 | INFO     | [payload] validate_pre thread has finished
[2026-01-24 18:13:54] 2026-01-24 08:35:53,319 | INFO     | [data] control thread has finished
[2026-01-24 18:13:54] 2026-01-24 08:35:53,346 | INFO     | [job] create_data_payload thread has finished
[2026-01-24 18:13:54] 2026-01-24 08:35:53,350 | INFO     | [payload] execute_payloads thread has finished
[2026-01-24 18:13:54] 2026-01-24 08:35:53,360 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-24 18:13:54] 2026-01-24 08:35:53,450 | INFO     | [data] copytool_in thread has finished
[2026-01-24 18:13:54] 2026-01-24 08:35:53,483 | INFO     | [payload] failed_post thread has finished
[2026-01-24 18:13:54] 2026-01-24 08:35:53,500 | INFO     | [payload] validate_post thread has finished
[2026-01-24 18:13:54] 2026-01-24 08:35:53,586 | INFO     | [job] control thread has finished
[2026-01-24 18:13:54] 2026-01-24 08:35:54,416 | INFO     | [data] copytool_out thread has finished
[2026-01-24 18:13:54] 2026-01-24 08:35:56,424 | INFO     | [data] queue_monitor thread has finished
[2026-01-24 18:13:54] 2026-01-24 08:35:57,290 | INFO     | [monitor] cgroup control has ended
[2026-01-24 18:13:54] 2026-01-24 08:35:59,291 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140215732180800)>', '<ExcThread(monitor, started 140215096170240)>']
[2026-01-24 18:13:54] 2026-01-24 08:36:04,325 | INFO     | all workflow threads have been joined
[2026-01-24 18:13:54] 2026-01-24 08:36:04,326 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-24 18:13:54] 2026-01-24 08:36:04,326 | INFO     | traces error code: 0
[2026-01-24 18:13:54] 2026-01-24 08:36:04,326 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-24 18:13:54] 2026-01-24 08:36:48,067 | INFO     | PID=982880 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-24 18:13:54] 2026-01-24 08:36:48,068 | INFO     | .. there are 44 such processes running
[2026-01-24 18:13:54] 2026-01-24 08:36:48,410 | INFO     | found 0 job(s) in 20 queues
[2026-01-24 18:13:54] 2026-01-24 08:36:48,410 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-24 18:13:54] 2026-01-24 08:36:48,410 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-24 18:13:54] 2026-01-24 08:36:48,410 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-24 18:13:54] 2026-01-24 08:36:48,411 | INFO     | [monitor] control thread has ended
[2026-01-24 18:13:54] 2026-01-24 08:36:54,070 [wrapper] ==== pilot stdout END ====
[2026-01-24 18:13:54] 2026-01-24 08:36:54,205 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-24 18:13:54] 2026-01-24 08:36:54,231 [wrapper] pilotpid: 982880
[2026-01-24 18:13:54] 2026-01-24 08:36:54,264 [wrapper] Pilot exit status: 0
[2026-01-24 18:13:54] 2026-01-24 08:36:54,468 [wrapper] pandaids: 6980223746
[2026-01-24 18:13:54] 2026-01-24 08:36:55,796 [wrapper] cleanup supervisor_pilot 3445598 982881
[2026-01-24 18:13:54] 2026-01-24 08:36:55,839 [wrapper] Test setup, not cleaning
[2026-01-24 18:13:54] 2026-01-24 08:36:55,869 [wrapper] apfmon messages muted
[2026-01-24 18:13:54] 2026-01-24 08:36:55,912 [wrapper] ==== wrapper stdout END ====
[2026-01-24 18:13:54] 2026-01-24 08:36:55,946 [wrapper] ==== wrapper stderr END ====
[2026-01-24 18:13:54]  *** Error codes and diagnostics ***
[2026-01-24 18:13:54]     "exeErrorCode": 0,
[2026-01-24 18:13:54]     "exeErrorDiag": "",
[2026-01-24 18:13:54]     "pilotErrorCode": 0,
[2026-01-24 18:13:54]     "pilotErrorDiag": "",
[2026-01-24 18:13:54]  *** Listing of results directory ***
[2026-01-24 18:13:54] total 766828
[2026-01-24 18:13:54] -rwx------. 1 boincer umatlas     36322 Jan 22 14:57 runpilot2-wrapper.sh
[2026-01-24 18:13:54] -rw-r--r--. 1 boincer umatlas      5111 Jan 22 14:57 queuedata.json
[2026-01-24 18:13:54] -rw-r--r--. 1 boincer umatlas    584422 Jan 22 14:57 pilot3.tar.gz
[2026-01-24 18:13:54] -rw-r--r--. 1 boincer umatlas       100 Jan 23 00:03 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-24 18:13:54] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 23 00:03 run_atlas
[2026-01-24 18:13:54] -rw-r--r--. 1 boincer umatlas       105 Jan 23 00:03 job.xml
[2026-01-24 18:13:54] -rw-r--r--. 2 boincer umatlas 413762836 Jan 23 00:03 EVNT.47961981._000086.pool.root.1
[2026-01-24 18:13:54] drwxrwx--x. 2 boincer umatlas      4096 Jan 23 00:03 shared
[2026-01-24 18:13:54] -rw-r--r--. 2 boincer umatlas    597953 Jan 23 00:03 input.tar.gz
[2026-01-24 18:13:54] -rw-r--r--. 2 boincer umatlas     15845 Jan 23 00:03 start_atlas.sh
[2026-01-24 18:13:54] -rw-r--r--. 1 boincer umatlas         0 Jan 23 00:03 boinc_lockfile
[2026-01-24 18:13:54] -rw-r--r--. 1 boincer umatlas      2872 Jan 23 00:03 pandaJob.out
[2026-01-24 18:13:54] -rw-------. 1 boincer umatlas        57 Jan 23 00:03 setup.sh.local
[2026-01-24 18:13:54] -rw-------. 1 boincer umatlas       439 Jan 23 00:07 workernode_map.json
[2026-01-24 18:13:54] -rw-------. 1 boincer umatlas   1003905 Jan 23 00:08 agis_schedconf.cvmfs.json
[2026-01-24 18:13:54] drwx------. 5 boincer umatlas      4096 Jan 23 00:08 pilot3
[2026-01-24 18:13:54] -rw-r--r--. 1 boincer umatlas       531 Jan 24 02:09 boinc_task_state.xml
[2026-01-24 18:13:54] -rw-------. 1 boincer umatlas 348145834 Jan 24 03:33 HITS.47961985._003120.pool.root.1
[2026-01-24 18:13:54] -rw-------. 1 boincer umatlas      1060 Jan 24 03:34 memory_monitor_summary.json
[2026-01-24 18:13:54] -rw-------. 1 boincer umatlas   1516246 Jan 24 03:35 agis_ddmendpoints.agis.ALL.json
[2026-01-24 18:13:54] -rw-------. 1 boincer umatlas   2064949 Jan 24 03:35 log.47961985._003120.job.log.tgz.1
[2026-01-24 18:13:54] -rw-------. 1 boincer umatlas      6950 Jan 24 03:35 heartbeat.json
[2026-01-24 18:13:54] -rw-------. 1 boincer umatlas        95 Jan 24 03:36 pilot_heartbeat.json
[2026-01-24 18:13:54] -rw-------. 1 boincer umatlas       822 Jan 24 03:36 pilotlog.txt
[2026-01-24 18:13:54] -rw-------. 1 boincer umatlas   7625356 Jan 24 03:36 log.47961985._003120.job.log.1
[2026-01-24 18:13:54] -rw-------. 1 boincer umatlas       353 Jan 24 03:36 output.list
[2026-01-24 18:13:54] -rw-r--r--. 1 boincer umatlas       620 Jan 24 03:36 runtime_log
[2026-01-24 18:13:54] -rw-------. 1 boincer umatlas   9707520 Jan 24 03:36 result.tar.gz
[2026-01-24 18:13:54] -rw-r--r--. 1 boincer umatlas      9332 Jan 24 03:36 runtime_log.err
[2026-01-24 18:13:54] -rw-------. 1 boincer umatlas       660 Jan 24 03:36 HHqNDm4yF38n9Rq4apOajLDm4fhM0noT9bVo0NGKDmcWuKDmPRCLUo.diag
[2026-01-24 18:13:54] -rw-r--r--. 1 boincer umatlas      6660 Jan 24 18:10 init_data.xml
[2026-01-24 18:13:54] -rw-r--r--. 1 boincer umatlas      8192 Jan 24 18:13 boinc_mmap_file
[2026-01-24 18:13:54] -rw-r--r--. 1 boincer umatlas        27 Jan 24 18:13 wrapper_checkpoint.txt
[2026-01-24 18:13:54] -rw-r--r--. 1 boincer umatlas     21721 Jan 24 18:13 stderr.txt
[2026-01-24 18:13:54] HITS file was successfully produced:
[2026-01-24 18:13:54] -rw-------. 1 boincer umatlas 348145834 Jan 24 03:33 shared/HITS.pool.root.1
[2026-01-24 18:13:54]  *** Contents of shared directory: ***
[2026-01-24 18:13:54] total 754144
[2026-01-24 18:13:54] -rw-r--r--. 2 boincer umatlas 413762836 Jan 23 00:03 ATLAS.root_0
[2026-01-24 18:13:54] -rw-r--r--. 2 boincer umatlas    597953 Jan 23 00:03 input.tar.gz
[2026-01-24 18:13:54] -rw-r--r--. 2 boincer umatlas     15845 Jan 23 00:03 start_atlas.sh
[2026-01-24 18:13:54] -rw-------. 1 boincer umatlas 348145834 Jan 24 03:33 HITS.pool.root.1
[2026-01-24 18:13:54] -rw-------. 1 boincer umatlas   9707520 Jan 24 03:36 result.tar.gz
18:13:56 (971172): run_atlas exited; CPU time 148645.443155
18:13:56 (971172): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN