Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
16:15:09 (747646): wrapper (7.7.26015): starting
16:15:09 (747646): wrapper: running run_atlas (--nthreads 4)
[2026-01-23 16:15:09] Arguments: --nthreads 4
[2026-01-23 16:15:09] Threads: 4
[2026-01-23 16:15:09] Checking for CVMFS
[2026-01-23 16:15:09] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-23 16:15:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-23 16:15:09] Running cvmfs_config stat atlas.cern.ch
[2026-01-23 16:15:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-23 16:15:09] 2.9.2.0 41542 4299 104092 155438 3 50 22038755 36864000 0 130560 0 2009462 99.988 113912 10573 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-01-23 16:15:09] CVMFS is ok
[2026-01-23 16:15:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-23 16:15:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-23 16:15:09] Further information can be found at the LHC@home message board.
[2026-01-23 16:15:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-23 16:15:09] Checking for apptainer binary...
[2026-01-23 16:15:09] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-23 16:15:09] Running /usr/bin/apptainer --version
[2026-01-23 16:15:09] apptainer version 1.4.1-1.1
[2026-01-23 16:15:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-23 16:15:09] thA332a
[2026-01-23 16:15:09] apptainer works
[2026-01-23 16:15:09] Set ATHENA_PROC_NUMBER=4
[2026-01-23 16:15:09] Set ATHENA_CORE_NUMBER=4
[2026-01-23 16:15:09] Starting ATLAS job with PandaID=6978070197
[2026-01-23 16:15:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-23 17:20:33]  *** The last 200 lines of the pilot log: ***
[2026-01-23 17:20:33] 2026-01-23 16:20:06,097 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-23 17:20:33] 2026-01-23 16:20:06,097 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-23 17:20:33] 2026-01-23 16:20:06,097 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-23 17:20:33] 2026-01-23 16:20:06,097 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-23 17:20:33] 2026-01-23 16:20:06,097 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-23 17:20:33] 2026-01-23 16:20:06,097 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-23 17:20:33] 2026-01-23 16:20:06,097 | INFO     | job 6978070197 has completed (purged errors)
[2026-01-23 17:20:33] 2026-01-23 16:20:06,097 | INFO     | overall cleanup function is called
[2026-01-23 17:20:33] 2026-01-23 16:20:07,104 | INFO     | --- collectZombieJob: --- 10, [756281]
[2026-01-23 17:20:33] 2026-01-23 16:20:07,104 | INFO     | zombie collector waiting for pid 756281
[2026-01-23 17:20:33] 2026-01-23 16:20:07,104 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-23 17:20:33] 2026-01-23 16:20:07,104 | INFO     | collected zombie processes
[2026-01-23 17:20:33] 2026-01-23 16:20:07,104 | INFO     | will attempt to kill all subprocesses of pid=756281
[2026-01-23 17:20:33] 2026-01-23 16:20:07,147 | INFO     | process IDs to be killed: [756281] (in reverse order)
[2026-01-23 17:20:33] 2026-01-23 16:20:07,181 | WARNING  | found no corresponding commands to process id(s)
[2026-01-23 17:20:33] 2026-01-23 16:20:07,181 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-23 17:20:33] 2026-01-23 16:20:07,183 | INFO     | did not find any defunct processes belonging to 756281
[2026-01-23 17:20:33] 2026-01-23 16:20:07,184 | INFO     | did not find any defunct processes belonging to 756281
[2026-01-23 17:20:33] 2026-01-23 16:20:07,184 | INFO     | ready for new job
[2026-01-23 17:20:33] 2026-01-23 16:20:07,184 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-23 17:20:33] 2026-01-23 16:20:07,185 | INFO     | **************************************
[2026-01-23 17:20:33] 2026-01-23 16:20:07,185 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-23 17:20:33] 2026-01-23 16:20:07,185 | INFO     | **************************************
[2026-01-23 17:20:33] 2026-01-23 16:20:07,185 | INFO     | 
[2026-01-23 17:20:33] 2026-01-23 16:20:07,186 | INFO     | architecture information:
[2026-01-23 17:20:33] 2026-01-23 16:20:07,186 | INFO     | executing command: cat /etc/os-release
[2026-01-23 17:20:33] 2026-01-23 16:20:07,200 | INFO     | cat /etc/os-release:
[2026-01-23 17:20:33] NAME="CentOS Linux"
[2026-01-23 17:20:33] VERSION="7 (Core)"
[2026-01-23 17:20:33] ID="centos"
[2026-01-23 17:20:33] ID_LIKE="rhel fedora"
[2026-01-23 17:20:33] VERSION_ID="7"
[2026-01-23 17:20:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-23 17:20:33] ANSI_COLOR="0;31"
[2026-01-23 17:20:33] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-23 17:20:33] HOME_URL="https://www.centos.org/"
[2026-01-23 17:20:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-23 17:20:33] 
[2026-01-23 17:20:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-23 17:20:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-23 17:20:33] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-23 17:20:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-23 17:20:33] 
[2026-01-23 17:20:33] 2026-01-23 16:20:07,200 | INFO     | **************************************
[2026-01-23 17:20:33] 2026-01-23 16:20:07,703 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-01-23 17:20:33] 2026-01-23 16:20:07,722 | INFO     | sufficient remaining disk space (334892105728 B)
[2026-01-23 17:20:33] 2026-01-23 16:20:07,722 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-23 17:20:33] 2026-01-23 16:20:07,722 | INFO     | current server update state: UPDATING_FINAL
[2026-01-23 17:20:33] 2026-01-23 16:20:07,722 | INFO     | update_server=False
[2026-01-23 17:20:33] 2026-01-23 16:20:07,722 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-23 17:20:33] 2026-01-23 16:20:07,723 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-23 17:20:33] 2026-01-23 16:20:07,723 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-01-23 17:20:33] 2026-01-23 16:20:07,723 | INFO     | found 0 job(s) in 20 queues
[2026-01-23 17:20:33] 2026-01-23 16:20:07,723 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-23 17:20:33] 2026-01-23 16:20:07,723 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-23 17:20:33] 2026-01-23 16:20:07,723 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-23 17:20:33] 2026-01-23 16:20:07,905 | INFO     | all payload control threads have been joined
[2026-01-23 17:20:33] 2026-01-23 16:20:07,917 | INFO     | all job control threads have been joined
[2026-01-23 17:20:33] 2026-01-23 16:20:08,209 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-23 17:20:33] 2026-01-23 16:20:08,210 | INFO     | aborting loop
[2026-01-23 17:20:33] 2026-01-23 16:20:08,320 | INFO     | all data control threads have been joined
[2026-01-23 17:20:33] 2026-01-23 16:20:08,568 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-23 17:20:33] 2026-01-23 16:20:08,728 | INFO     | [job] retrieve thread has finished
[2026-01-23 17:20:33] 2026-01-23 16:20:08,728 | INFO     | [job] queue monitor thread has finished
[2026-01-23 17:20:33] 2026-01-23 16:20:08,911 | INFO     | [payload] control thread has finished
[2026-01-23 17:20:33] 2026-01-23 16:20:08,923 | INFO     | [job] control thread has finished
[2026-01-23 17:20:33] 2026-01-23 16:20:09,062 | INFO     | [payload] failed_post thread has finished
[2026-01-23 17:20:33] 2026-01-23 16:20:09,215 | INFO     | [job] job monitor thread has finished
[2026-01-23 17:20:33] 2026-01-23 16:20:09,325 | INFO     | [data] control thread has finished
[2026-01-23 17:20:33] 2026-01-23 16:20:09,407 | INFO     | [payload] execute_payloads thread has finished
[2026-01-23 17:20:33] 2026-01-23 16:20:09,440 | INFO     | [job] validate thread has finished
[2026-01-23 17:20:33] 2026-01-23 16:20:09,544 | INFO     | [payload] validate_pre thread has finished
[2026-01-23 17:20:33] 2026-01-23 16:20:09,544 | INFO     | [job] create_data_payload thread has finished
[2026-01-23 17:20:33] 2026-01-23 16:20:09,771 | INFO     | [data] copytool_in thread has finished
[2026-01-23 17:20:33] 2026-01-23 16:20:09,843 | INFO     | [payload] validate_post thread has finished
[2026-01-23 17:20:33] 2026-01-23 16:20:10,573 | INFO     | [data] copytool_out thread has finished
[2026-01-23 17:20:33] 2026-01-23 16:20:11,730 | INFO     | [data] queue_monitor thread has finished
[2026-01-23 17:20:33] 2026-01-23 16:20:18,645 | INFO     | job.realtimelogging is not enabled
[2026-01-23 17:20:33] 2026-01-23 16:20:19,651 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-23 17:20:33] 2026-01-23 16:20:26,572 | INFO     | [monitor] cgroup control has ended
[2026-01-23 17:20:33] 2026-01-23 16:20:27,811 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140594435823424)>', '<ExcThread(monitor, started 140593128793856)>']
[2026-01-23 17:20:33] 2026-01-23 16:20:27,830 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-23 17:20:33] 2026-01-23 16:20:27,830 | INFO     | [monitor] control thread has ended
[2026-01-23 17:20:33] 2026-01-23 16:20:32,837 | INFO     | all workflow threads have been joined
[2026-01-23 17:20:33] 2026-01-23 16:20:32,837 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-23 17:20:33] 2026-01-23 16:20:32,837 | INFO     | traces error code: 0
[2026-01-23 17:20:33] 2026-01-23 16:20:32,837 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-23 17:20:33] 2026-01-23 16:20:32,918 [wrapper] ==== pilot stdout END ====
[2026-01-23 17:20:33] 2026-01-23 16:20:32,923 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-23 17:20:33] 2026-01-23 16:20:32,927 [wrapper] pilotpid: 751761
[2026-01-23 17:20:33] 2026-01-23 16:20:32,931 [wrapper] Pilot exit status: 0
[2026-01-23 17:20:33] 2026-01-23 16:20:32,943 [wrapper] pandaids: 6978070197
[2026-01-23 17:20:33] 2026-01-23 16:20:32,966 [wrapper] cleanup supervisor_pilot  761357 751762
[2026-01-23 17:20:33] 2026-01-23 16:20:32,970 [wrapper] Test setup, not cleaning
[2026-01-23 17:20:33] 2026-01-23 16:20:32,974 [wrapper] apfmon messages muted
[2026-01-23 17:20:33] 2026-01-23 16:20:32,978 [wrapper] ==== wrapper stdout END ====
[2026-01-23 17:20:33] 2026-01-23 16:20:32,982 [wrapper] ==== wrapper stderr END ====
[2026-01-23 17:20:33]  *** Error codes and diagnostics ***
[2026-01-23 17:20:33]     "exeErrorCode": 0,
[2026-01-23 17:20:33]     "exeErrorDiag": "",
[2026-01-23 17:20:33]     "pilotErrorCode": 0,
[2026-01-23 17:20:33]     "pilotErrorDiag": "",
[2026-01-23 17:20:33]  *** Listing of results directory ***
[2026-01-23 17:20:33] total 662940
[2026-01-23 17:20:33] -rw-r--r-- 1 boinc boinc    584422 Jan 23 01:29 pilot3.tar.gz
[2026-01-23 17:20:33] -rwx------ 1 boinc boinc     36322 Jan 23 01:30 runpilot2-wrapper.sh
[2026-01-23 17:20:33] -rw-r--r-- 1 boinc boinc      5111 Jan 23 01:30 queuedata.json
[2026-01-23 17:20:33] -rw-r--r-- 1 boinc boinc       100 Jan 23 16:15 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-23 17:20:33] -rwxr-xr-x 1 boinc boinc      7986 Jan 23 16:15 run_atlas
[2026-01-23 17:20:33] -rw-r--r-- 1 boinc boinc       105 Jan 23 16:15 job.xml
[2026-01-23 17:20:33] -rw-r--r-- 2 boinc boinc 496990186 Jan 23 16:15 EVNT.48310665._000043.pool.root.1
[2026-01-23 17:20:33] -rw-r--r-- 2 boinc boinc    597748 Jan 23 16:15 input.tar.gz
[2026-01-23 17:20:33] -rw-r--r-- 2 boinc boinc     15845 Jan 23 16:15 start_atlas.sh
[2026-01-23 17:20:33] drwxrwx--x 2 boinc boinc      4096 Jan 23 16:15 shared
[2026-01-23 17:20:33] -rw-r--r-- 1 boinc boinc         0 Jan 23 16:15 boinc_setup_complete
[2026-01-23 17:20:33] -rw-r--r-- 1 boinc boinc      6370 Jan 23 16:15 init_data.xml
[2026-01-23 17:20:33] -rw-r--r-- 1 boinc boinc         0 Jan 23 16:15 boinc_lockfile
[2026-01-23 17:20:33] -rw-r--r-- 1 boinc boinc      2523 Jan 23 16:15 pandaJob.out
[2026-01-23 17:20:33] -rw------- 1 boinc boinc   1004230 Jan 23 16:15 agis_schedconf.cvmfs.json
[2026-01-23 17:20:33] -rw------- 1 boinc boinc   1516246 Jan 23 16:15 agis_ddmendpoints.agis.ALL.json
[2026-01-23 17:20:33] -rw------- 1 boinc boinc       428 Jan 23 16:15 workernode_map.json
[2026-01-23 17:20:33] drwx------ 5 boinc boinc      4096 Jan 23 16:15 pilot3
[2026-01-23 17:20:33] -rw------- 1 boinc boinc        95 Jan 23 17:19 pilot_heartbeat.json
[2026-01-23 17:20:33] -rw------- 1 boinc boinc 176202101 Jan 23 17:19 HITS.48310670._002139.pool.root.1
[2026-01-23 17:20:33] -rw-r--r-- 1 boinc boinc       530 Jan 23 17:19 boinc_task_state.xml
[2026-01-23 17:20:33] -rw------- 1 boinc boinc      1022 Jan 23 17:19 memory_monitor_summary.json
[2026-01-23 17:20:33] -rw------- 1 boinc boinc    285156 Jan 23 17:20 log.48310670._002139.job.log.tgz.1
[2026-01-23 17:20:33] -rw------- 1 boinc boinc      6307 Jan 23 17:20 heartbeat.json
[2026-01-23 17:20:33] -rw-r--r-- 1 boinc boinc      8192 Jan 23 17:20 boinc_mmap_file
[2026-01-23 17:20:33] -rw-r--r-- 1 boinc boinc        27 Jan 23 17:20 wrapper_checkpoint.txt
[2026-01-23 17:20:33] -rw------- 1 boinc boinc      4624 Jan 23 17:20 pilotlog.txt
[2026-01-23 17:20:33] -rw------- 1 boinc boinc    580773 Jan 23 17:20 log.48310670._002139.job.log.1
[2026-01-23 17:20:33] -rw------- 1 boinc boinc       357 Jan 23 17:20 output.list
[2026-01-23 17:20:33] -rw-r--r-- 1 boinc boinc       620 Jan 23 17:20 runtime_log
[2026-01-23 17:20:33] -rw------- 1 boinc boinc    880640 Jan 23 17:20 result.tar.gz
[2026-01-23 17:20:33] -rw-r--r-- 1 boinc boinc      8901 Jan 23 17:20 runtime_log.err
[2026-01-23 17:20:33] -rw------- 1 boinc boinc       658 Jan 23 17:20 XY8LDm4EK38n9Rq4apOajLDm4fhM0noT9bVo0NGKDmAyuKDm9Z7A5n.diag
[2026-01-23 17:20:33] -rw-r--r-- 1 boinc boinc     11421 Jan 23 17:20 stderr.txt
[2026-01-23 17:20:33] HITS file was successfully produced:
[2026-01-23 17:20:33] -rw------- 1 boinc boinc 176202101 Jan 23 17:19 shared/HITS.pool.root.1
[2026-01-23 17:20:33]  *** Contents of shared directory: ***
[2026-01-23 17:20:33] total 658888
[2026-01-23 17:20:33] -rw-r--r-- 2 boinc boinc 496990186 Jan 23 16:15 ATLAS.root_0
[2026-01-23 17:20:33] -rw-r--r-- 2 boinc boinc    597748 Jan 23 16:15 input.tar.gz
[2026-01-23 17:20:33] -rw-r--r-- 2 boinc boinc     15845 Jan 23 16:15 start_atlas.sh
[2026-01-23 17:20:33] -rw------- 1 boinc boinc 176202101 Jan 23 17:19 HITS.pool.root.1
[2026-01-23 17:20:33] -rw------- 1 boinc boinc    880640 Jan 23 17:20 result.tar.gz
17:20:34 (747646): run_atlas exited; CPU time 14579.588869
17:20:34 (747646): called boinc_finish(0)

</stderr_txt>
]]>

©2026 CERN