Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
17:20:38 (761584): wrapper (7.7.26015): starting
17:20:38 (761584): wrapper: running run_atlas (--nthreads 4)
[2026-01-23 17:20:38] Arguments: --nthreads 4
[2026-01-23 17:20:38] Threads: 4
[2026-01-23 17:20:38] Checking for CVMFS
[2026-01-23 17:20:38] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-23 17:20:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-23 17:20:38] Running cvmfs_config stat atlas.cern.ch
[2026-01-23 17:20:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-23 17:20:38] 2.9.2.0 41542 4364 105392 155442 2 49 22047024 36864000 0 130560 0 2049133 99.988 117705 10363 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2026-01-23 17:20:38] CVMFS is ok
[2026-01-23 17:20:38] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-23 17:20:38] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-23 17:20:38] Further information can be found at the LHC@home message board.
[2026-01-23 17:20:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-23 17:20:38] Checking for apptainer binary...
[2026-01-23 17:20:38] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-23 17:20:38] Running /usr/bin/apptainer --version
[2026-01-23 17:20:38] apptainer version 1.4.1-1.1
[2026-01-23 17:20:38] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-23 17:20:38] thA332a
[2026-01-23 17:20:38] apptainer works
[2026-01-23 17:20:38] Set ATHENA_PROC_NUMBER=4
[2026-01-23 17:20:38] Set ATHENA_CORE_NUMBER=4
[2026-01-23 17:20:38] Starting ATLAS job with PandaID=6978070203
[2026-01-23 17:20:38] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-23 18:26:12]  *** The last 200 lines of the pilot log: ***
[2026-01-23 18:26:12] 2026-01-23 17:25:39,996 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-23 18:26:12] 2026-01-23 17:25:39,996 | INFO     | job 6978070203 has completed (purged errors)
[2026-01-23 18:26:12] 2026-01-23 17:25:39,996 | INFO     | overall cleanup function is called
[2026-01-23 18:26:12] 2026-01-23 17:25:41,003 | INFO     | --- collectZombieJob: --- 10, [770227]
[2026-01-23 18:26:12] 2026-01-23 17:25:41,003 | INFO     | zombie collector waiting for pid 770227
[2026-01-23 18:26:12] 2026-01-23 17:25:41,003 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-23 18:26:12] 2026-01-23 17:25:41,003 | INFO     | collected zombie processes
[2026-01-23 18:26:12] 2026-01-23 17:25:41,003 | INFO     | will attempt to kill all subprocesses of pid=770227
[2026-01-23 18:26:12] 2026-01-23 17:25:41,046 | INFO     | process IDs to be killed: [770227] (in reverse order)
[2026-01-23 18:26:12] 2026-01-23 17:25:41,080 | WARNING  | found no corresponding commands to process id(s)
[2026-01-23 18:26:12] 2026-01-23 17:25:41,081 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-23 18:26:12] 2026-01-23 17:25:41,082 | INFO     | did not find any defunct processes belonging to 770227
[2026-01-23 18:26:12] 2026-01-23 17:25:41,083 | INFO     | did not find any defunct processes belonging to 770227
[2026-01-23 18:26:12] 2026-01-23 17:25:41,084 | INFO     | ready for new job
[2026-01-23 18:26:12] 2026-01-23 17:25:41,084 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-23 18:26:12] 2026-01-23 17:25:41,084 | INFO     | **************************************
[2026-01-23 18:26:12] 2026-01-23 17:25:41,084 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-23 18:26:12] 2026-01-23 17:25:41,084 | INFO     | **************************************
[2026-01-23 18:26:12] 2026-01-23 17:25:41,084 | INFO     | 
[2026-01-23 18:26:12] 2026-01-23 17:25:41,085 | INFO     | architecture information:
[2026-01-23 18:26:12] 2026-01-23 17:25:41,085 | INFO     | executing command: cat /etc/os-release
[2026-01-23 18:26:12] 2026-01-23 17:25:41,099 | INFO     | cat /etc/os-release:
[2026-01-23 18:26:12] NAME="CentOS Linux"
[2026-01-23 18:26:12] VERSION="7 (Core)"
[2026-01-23 18:26:12] ID="centos"
[2026-01-23 18:26:12] ID_LIKE="rhel fedora"
[2026-01-23 18:26:12] VERSION_ID="7"
[2026-01-23 18:26:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-23 18:26:12] ANSI_COLOR="0;31"
[2026-01-23 18:26:12] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-23 18:26:12] HOME_URL="https://www.centos.org/"
[2026-01-23 18:26:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-23 18:26:12] 
[2026-01-23 18:26:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-23 18:26:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-23 18:26:12] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-23 18:26:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-23 18:26:12] 
[2026-01-23 18:26:12] 2026-01-23 17:25:41,099 | INFO     | **************************************
[2026-01-23 18:26:12] 2026-01-23 17:25:41,603 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2026-01-23 18:26:12] 2026-01-23 17:25:41,621 | INFO     | sufficient remaining disk space (335381790720 B)
[2026-01-23 18:26:12] 2026-01-23 17:25:41,621 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-23 18:26:12] 2026-01-23 17:25:41,621 | INFO     | current server update state: UPDATING_FINAL
[2026-01-23 18:26:12] 2026-01-23 17:25:41,621 | INFO     | update_server=False
[2026-01-23 18:26:12] 2026-01-23 17:25:41,621 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-23 18:26:12] 2026-01-23 17:25:41,621 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-23 18:26:12] 2026-01-23 17:25:41,621 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-23 18:26:12] 2026-01-23 17:25:41,622 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-23 18:26:12] 2026-01-23 17:25:41,741 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-23 18:26:12] 2026-01-23 17:25:41,742 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-23 18:26:12] 2026-01-23 17:25:41,742 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-23 18:26:12] 2026-01-23 17:25:41,742 | INFO     | will abort loop
[2026-01-23 18:26:12] 2026-01-23 17:25:41,929 | INFO     | all payload control threads have been joined
[2026-01-23 18:26:12] 2026-01-23 17:25:42,226 | INFO     | all data control threads have been joined
[2026-01-23 18:26:12] 2026-01-23 17:25:42,627 | INFO     | [job] retrieve thread has finished
[2026-01-23 18:26:12] 2026-01-23 17:25:42,627 | INFO     | [job] queue monitor thread has finished
[2026-01-23 18:26:12] 2026-01-23 17:25:42,640 | INFO     | all job control threads have been joined
[2026-01-23 18:26:12] 2026-01-23 17:25:42,748 | INFO     | [job] job monitor thread has finished
[2026-01-23 18:26:12] 2026-01-23 17:25:42,935 | INFO     | [payload] control thread has finished
[2026-01-23 18:26:12] 2026-01-23 17:25:43,232 | INFO     | [data] control thread has finished
[2026-01-23 18:26:12] 2026-01-23 17:25:43,341 | INFO     | [payload] failed_post thread has finished
[2026-01-23 18:26:12] 2026-01-23 17:25:43,367 | INFO     | [job] validate thread has finished
[2026-01-23 18:26:12] 2026-01-23 17:25:43,430 | INFO     | [payload] execute_payloads thread has finished
[2026-01-23 18:26:12] 2026-01-23 17:25:43,432 | INFO     | [job] create_data_payload thread has finished
[2026-01-23 18:26:12] 2026-01-23 17:25:43,533 | INFO     | [payload] validate_pre thread has finished
[2026-01-23 18:26:12] 2026-01-23 17:25:43,628 | INFO     | [data] copytool_out thread has finished
[2026-01-23 18:26:12] 2026-01-23 17:25:43,645 | INFO     | [job] control thread has finished
[2026-01-23 18:26:12] 2026-01-23 17:25:43,653 | INFO     | [data] copytool_in thread has finished
[2026-01-23 18:26:12] 2026-01-23 17:25:43,796 | INFO     | job.realtimelogging is not enabled
[2026-01-23 18:26:12] 2026-01-23 17:25:43,861 | INFO     | [payload] validate_post thread has finished
[2026-01-23 18:26:12] 2026-01-23 17:25:44,802 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-23 18:26:12] 2026-01-23 17:25:45,628 | INFO     | [data] queue_monitor thread has finished
[2026-01-23 18:26:12] 2026-01-23 17:25:56,645 | INFO     | [monitor] cgroup control has ended
[2026-01-23 18:26:12] 2026-01-23 17:25:57,651 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139761667532608)>', '<ExcThread(monitor, started 139761012418304)>']
[2026-01-23 18:26:12] 2026-01-23 17:26:02,677 | INFO     | all workflow threads have been joined
[2026-01-23 18:26:12] 2026-01-23 17:26:02,677 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-23 18:26:12] 2026-01-23 17:26:02,677 | INFO     | traces error code: 0
[2026-01-23 18:26:12] 2026-01-23 17:26:02,677 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-23 18:26:12] 2026-01-23 17:26:12,282 | INFO     | PID=765702 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-23 18:26:12] 2026-01-23 17:26:12,283 | INFO     | found 0 job(s) in 20 queues
[2026-01-23 18:26:12] 2026-01-23 17:26:12,283 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-23 18:26:12] 2026-01-23 17:26:12,283 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-23 18:26:12] 2026-01-23 17:26:12,283 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-23 18:26:12] 2026-01-23 17:26:12,283 | INFO     | [monitor] control thread has ended
[2026-01-23 18:26:12] 2026-01-23 17:26:12,359 [wrapper] ==== pilot stdout END ====
[2026-01-23 18:26:12] 2026-01-23 17:26:12,364 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-23 18:26:12] 2026-01-23 17:26:12,368 [wrapper] pilotpid: 765702
[2026-01-23 18:26:12] 2026-01-23 17:26:12,372 [wrapper] Pilot exit status: 0
[2026-01-23 18:26:12] 2026-01-23 17:26:12,384 [wrapper] pandaids: 6978070203
[2026-01-23 18:26:12] 2026-01-23 17:26:12,406 [wrapper] cleanup supervisor_pilot  775302 765703
[2026-01-23 18:26:12] 2026-01-23 17:26:12,410 [wrapper] Test setup, not cleaning
[2026-01-23 18:26:12] 2026-01-23 17:26:12,414 [wrapper] apfmon messages muted
[2026-01-23 18:26:12] 2026-01-23 17:26:12,418 [wrapper] ==== wrapper stdout END ====
[2026-01-23 18:26:12] 2026-01-23 17:26:12,422 [wrapper] ==== wrapper stderr END ====
[2026-01-23 18:26:12]  *** Error codes and diagnostics ***
[2026-01-23 18:26:12]     "exeErrorCode": 0,
[2026-01-23 18:26:12]     "exeErrorDiag": "",
[2026-01-23 18:26:12]     "pilotErrorCode": 0,
[2026-01-23 18:26:12]     "pilotErrorDiag": "",
[2026-01-23 18:26:12]  *** Listing of results directory ***
[2026-01-23 18:26:12] total 661220
[2026-01-23 18:26:12] -rw-r--r-- 1 boinc boinc    584422 Jan 23 01:29 pilot3.tar.gz
[2026-01-23 18:26:12] -rwx------ 1 boinc boinc     36322 Jan 23 01:30 runpilot2-wrapper.sh
[2026-01-23 18:26:12] -rw-r--r-- 1 boinc boinc      5111 Jan 23 01:30 queuedata.json
[2026-01-23 18:26:12] -rw-r--r-- 1 boinc boinc       100 Jan 23 17:20 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-23 18:26:12] -rwxr-xr-x 1 boinc boinc      7986 Jan 23 17:20 run_atlas
[2026-01-23 18:26:12] -rw-r--r-- 1 boinc boinc       105 Jan 23 17:20 job.xml
[2026-01-23 18:26:12] -rw-r--r-- 2 boinc boinc 496990186 Jan 23 17:20 EVNT.48310665._000043.pool.root.1
[2026-01-23 18:26:12] -rw-r--r-- 2 boinc boinc    597751 Jan 23 17:20 input.tar.gz
[2026-01-23 18:26:12] -rw-r--r-- 2 boinc boinc     15845 Jan 23 17:20 start_atlas.sh
[2026-01-23 18:26:12] drwxrwx--x 2 boinc boinc      4096 Jan 23 17:20 shared
[2026-01-23 18:26:12] -rw-r--r-- 1 boinc boinc         0 Jan 23 17:20 boinc_setup_complete
[2026-01-23 18:26:12] -rw-r--r-- 1 boinc boinc      6370 Jan 23 17:20 init_data.xml
[2026-01-23 18:26:12] -rw-r--r-- 1 boinc boinc         0 Jan 23 17:20 boinc_lockfile
[2026-01-23 18:26:12] -rw-r--r-- 1 boinc boinc      2523 Jan 23 17:20 pandaJob.out
[2026-01-23 18:26:12] -rw------- 1 boinc boinc   1004246 Jan 23 17:20 agis_schedconf.cvmfs.json
[2026-01-23 18:26:12] -rw------- 1 boinc boinc   1516246 Jan 23 17:20 agis_ddmendpoints.agis.ALL.json
[2026-01-23 18:26:12] -rw------- 1 boinc boinc       428 Jan 23 17:20 workernode_map.json
[2026-01-23 18:26:12] drwx------ 5 boinc boinc      4096 Jan 23 17:20 pilot3
[2026-01-23 18:26:12] -rw------- 1 boinc boinc 174424130 Jan 23 18:25 HITS.48310670._002145.pool.root.1
[2026-01-23 18:26:12] -rw-r--r-- 1 boinc boinc       530 Jan 23 18:25 boinc_task_state.xml
[2026-01-23 18:26:12] -rw------- 1 boinc boinc      1020 Jan 23 18:25 memory_monitor_summary.json
[2026-01-23 18:26:12] -rw------- 1 boinc boinc    291555 Jan 23 18:25 log.48310670._002145.job.log.tgz.1
[2026-01-23 18:26:12] -rw------- 1 boinc boinc      6312 Jan 23 18:25 heartbeat.json
[2026-01-23 18:26:12] -rw-r--r-- 1 boinc boinc        27 Jan 23 18:26 wrapper_checkpoint.txt
[2026-01-23 18:26:12] -rw-r--r-- 1 boinc boinc      8192 Jan 23 18:26 boinc_mmap_file
[2026-01-23 18:26:12] -rw------- 1 boinc boinc       746 Jan 23 18:26 pilotlog.txt
[2026-01-23 18:26:12] -rw------- 1 boinc boinc        95 Jan 23 18:26 pilot_heartbeat.json
[2026-01-23 18:26:12] -rw------- 1 boinc boinc    581187 Jan 23 18:26 log.48310670._002145.job.log.1
[2026-01-23 18:26:12] -rw------- 1 boinc boinc       357 Jan 23 18:26 output.list
[2026-01-23 18:26:12] -rw-r--r-- 1 boinc boinc       620 Jan 23 18:26 runtime_log
[2026-01-23 18:26:12] -rw------- 1 boinc boinc    890880 Jan 23 18:26 result.tar.gz
[2026-01-23 18:26:12] -rw-r--r-- 1 boinc boinc      8901 Jan 23 18:26 runtime_log.err
[2026-01-23 18:26:12] -rw------- 1 boinc boinc       658 Jan 23 18:26 YKEMDm4EK38n9Rq4apOajLDm4fhM0noT9bVo0NGKDmDyuKDmHVFmum.diag
[2026-01-23 18:26:12] -rw-r--r-- 1 boinc boinc     11219 Jan 23 18:26 stderr.txt
[2026-01-23 18:26:12] HITS file was successfully produced:
[2026-01-23 18:26:12] -rw------- 1 boinc boinc 174424130 Jan 23 18:25 shared/HITS.pool.root.1
[2026-01-23 18:26:12]  *** Contents of shared directory: ***
[2026-01-23 18:26:12] total 657164
[2026-01-23 18:26:12] -rw-r--r-- 2 boinc boinc 496990186 Jan 23 17:20 ATLAS.root_0
[2026-01-23 18:26:12] -rw-r--r-- 2 boinc boinc    597751 Jan 23 17:20 input.tar.gz
[2026-01-23 18:26:12] -rw-r--r-- 2 boinc boinc     15845 Jan 23 17:20 start_atlas.sh
[2026-01-23 18:26:12] -rw------- 1 boinc boinc 174424130 Jan 23 18:25 HITS.pool.root.1
[2026-01-23 18:26:12] -rw------- 1 boinc boinc    890880 Jan 23 18:26 result.tar.gz
18:26:13 (761584): run_atlas exited; CPU time 14360.857944
18:26:13 (761584): called boinc_finish(0)

</stderr_txt>
]]>

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