Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
23:10:07 (1545567): wrapper (7.7.26015): starting
23:10:07 (1545567): wrapper: running run_atlas (--nthreads 11)
[2026-01-22 23:10:07] Arguments: --nthreads 11
[2026-01-22 23:10:07] Threads: 11
[2026-01-22 23:10:07] Checking for CVMFS
[2026-01-22 23:10:08] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-22 23:10:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-22 23:10:08] Running cvmfs_config stat atlas.cern.ch
[2026-01-22 23:10:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-22 23:10:09] 2.13.3.0 12357 113025 247708 155420 3 853 25412164 32503808 36213 16776704 0 1515724078 99.597 1550996714 48486 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2026-01-22 23:10:09] CVMFS is ok
[2026-01-22 23:10:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-22 23:10:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-22 23:10:09] Further information can be found at the LHC@home message board.
[2026-01-22 23:10:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-22 23:10:09] Checking for apptainer binary...
[2026-01-22 23:10:09] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-22 23:10:09] Running /usr/bin/apptainer --version
[2026-01-22 23:10:09] apptainer version 1.4.5-2.el9
[2026-01-22 23:10:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-22 23:10:10] c8-7-2.aglt2.org
[2026-01-22 23:10:10] apptainer works
[2026-01-22 23:10:10] Set ATHENA_PROC_NUMBER=11
[2026-01-22 23:10:10] Set ATHENA_CORE_NUMBER=11
[2026-01-22 23:10:10] Starting ATLAS job with PandaID=6977571111
[2026-01-22 23:10:10] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-23 00:01:53]  *** The last 200 lines of the pilot log: ***
[2026-01-23 00:01:53]  filetype=log
[2026-01-23 00:01:53]  guid=b4bfe5ac-b295-45e0-b5db-9c0921cc936e
[2026-01-23 00:01:53]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-01-23 00:01:53]  is_altstaged=None
[2026-01-23 00:01:53]  is_tar=False
[2026-01-23 00:01:53]  lfn=log.48301086._007031.job.log.tgz.1
[2026-01-23 00:01:53]  mtime=0
[2026-01-23 00:01:53]  protocol_id=None
[2026-01-23 00:01:53]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-23 00:01:53]  replicas=None
[2026-01-23 00:01:53]  scope=mc23_13p6TeV
[2026-01-23 00:01:53]  status=None
[2026-01-23 00:01:53]  status_code=0
[2026-01-23 00:01:53]  storage_token=
[2026-01-23 00:01:53]  surl=/tmp/boinchome/slots/4/PanDA_Pilot-6977571111/log.48301086._007031.job.log.tgz.1
[2026-01-23 00:01:53]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/34/e9/log.48301086._007031.job.log.tgz.1
[2026-01-23 00:01:53]  workdir=None
[2026-01-23 00:01:53] ]
[2026-01-23 00:01:53] 2026-01-23 05:01:17,265 | INFO     | transferring file log.48301086._007031.job.log.tgz.1 from /tmp/boinchome/slots/4/PanDA_Pilot-6977571111/log.48301086._007031.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-01-23 00:01:53] 2026-01-23 05:01:17,265 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/4/PanDA_Pilot-6977571111/log.48301086._007031.job.log.tgz.1 /tmp/boinchome/slots/4/log.48301086._007031.job
[2026-01-23 00:01:53] 2026-01-23 05:01:17,281 | INFO     | adding to output.list: log.48301086._007031.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/34/e9/log.48301086._007031.job.log.tg
[2026-01-23 00:01:53] 2026-01-23 05:01:17,282 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-23 00:01:53] 2026-01-23 05:01:17,282 | INFO     | summary of transferred files:
[2026-01-23 00:01:53] 2026-01-23 05:01:17,282 | INFO     |  -- lfn=log.48301086._007031.job.log.tgz.1, status_code=0, status=transferred
[2026-01-23 00:01:53] 2026-01-23 05:01:17,282 | INFO     | stage-out finished correctly
[2026-01-23 00:01:53] 2026-01-23 05:01:17,332 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-23 00:01:53] 2026-01-23 05:01:17,439 | INFO     | time since job start (2984s) is within the limit (349056.0s)
[2026-01-23 00:01:53] 2026-01-23 05:01:17,768 | INFO     | monitor loop #212: job 0:6977571111 is in state 'finished'
[2026-01-23 00:01:53] 2026-01-23 05:01:17,768 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-23 00:01:53] 2026-01-23 05:01:19,397 | INFO     | PID=1567226 has CPU usage=9.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-23 00:01:53] 2026-01-23 05:01:19,397 | INFO     | .. there are 34 such processes running
[2026-01-23 00:01:53] 2026-01-23 05:01:20,006 | INFO     | job 6977571111 has state=finished
[2026-01-23 00:01:53] 2026-01-23 05:01:20,006 | INFO     | preparing for final server update for job 6977571111 in state='finished'
[2026-01-23 00:01:53] 2026-01-23 05:01:20,006 | INFO     | reading metadata from: /tmp/boinchome/slots/4/PanDA_Pilot-6977571111/jobReport.json
[2026-01-23 00:01:53] 2026-01-23 05:01:20,008 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/4/workernode_map.json
[2026-01-23 00:01:53] 2026-01-23 05:01:20,008 | INFO     | this job has now completed (state=finished)
[2026-01-23 00:01:53] 2026-01-23 05:01:20,008 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-23 00:01:53] 2026-01-23 05:01:20,008 | INFO     | log transfer has been attempted: DONE
[2026-01-23 00:01:53] 2026-01-23 05:01:20,008 | INFO     | job 6977571111 has finished - writing final server update
[2026-01-23 00:01:53] 2026-01-23 05:01:20,008 | INFO     | total number of processed events: 400 (read)
[2026-01-23 00:01:53] 2026-01-23 05:01:20,031 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-6977571111/memory_monitor_summary.json (trf name=prmon)
[2026-01-23 00:01:53] 2026-01-23 05:01:20,032 | INFO     | extracted standard info from prmon json
[2026-01-23 00:01:53] 2026-01-23 05:01:20,032 | INFO     | extracted standard memory fields from prmon json
[2026-01-23 00:01:53] 2026-01-23 05:01:20,032 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-23 00:01:53] 2026-01-23 05:01:20,032 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-23 00:01:53] 2026-01-23 05:01:20,032 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-23 00:01:53] 2026-01-23 05:01:20,033 | INFO     | fitting pss+swap vs Time
[2026-01-23 00:01:53] 2026-01-23 05:01:20,033 | INFO     | sum of square deviations: 21361839.609756097
[2026-01-23 00:01:53] 2026-01-23 05:01:20,033 | INFO     | sum of deviations: 1087645220.8292685
[2026-01-23 00:01:53] 2026-01-23 05:01:20,033 | INFO     | mean x: 1769143093.097561
[2026-01-23 00:01:53] 2026-01-23 05:01:20,033 | INFO     | mean y: 2650554.2926829266
[2026-01-23 00:01:53] 2026-01-23 05:01:20,033 | INFO     | intersect: -90073862766.77338
[2026-01-23 00:01:53] 2026-01-23 05:01:20,033 | INFO     | chi2: 0.0704817929545255
[2026-01-23 00:01:53] 2026-01-23 05:01:20,033 | INFO     | current memory leak: 50.92 B/s (using 41 data points, chi2=0.07)
[2026-01-23 00:01:53] 2026-01-23 05:01:20,034 | INFO     | could have reported an average CPU frequency of 3794 MHz (5 samples)
[2026-01-23 00:01:53] 2026-01-23 05:01:20,034 | INFO     | ..............................
[2026-01-23 00:01:53] 2026-01-23 05:01:20,034 | INFO     | . Timing measurements:
[2026-01-23 00:01:53] 2026-01-23 05:01:20,034 | INFO     | . get job = 0 s
[2026-01-23 00:01:53] 2026-01-23 05:01:20,034 | INFO     | . initial setup = 28 s
[2026-01-23 00:01:53] 2026-01-23 05:01:20,034 | INFO     | . payload setup = 34 s
[2026-01-23 00:01:53] 2026-01-23 05:01:20,034 | INFO     | . stage-in = 0 s
[2026-01-23 00:01:53] 2026-01-23 05:01:20,034 | INFO     | . payload execution = 2932 s
[2026-01-23 00:01:53] 2026-01-23 05:01:20,034 | INFO     | . stage-out = 0 s
[2026-01-23 00:01:53] 2026-01-23 05:01:20,034 | INFO     | . log creation = 0 s
[2026-01-23 00:01:53] 2026-01-23 05:01:20,034 | INFO     | ..............................
[2026-01-23 00:01:53] 2026-01-23 05:01:20,086 | INFO     | 
[2026-01-23 00:01:53] 2026-01-23 05:01:20,086 | INFO     | job summary report
[2026-01-23 00:01:53] 2026-01-23 05:01:20,086 | INFO     | --------------------------------------------------
[2026-01-23 00:01:53] 2026-01-23 05:01:20,086 | INFO     | PanDA job id: 6977571111
[2026-01-23 00:01:53] 2026-01-23 05:01:20,086 | INFO     | task id: 48301086
[2026-01-23 00:01:53] 2026-01-23 05:01:20,086 | INFO     | errors: (none)
[2026-01-23 00:01:53] 2026-01-23 05:01:20,086 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-23 00:01:53] 2026-01-23 05:01:20,086 | INFO     | pilot state: finished 
[2026-01-23 00:01:53] 2026-01-23 05:01:20,086 | INFO     | transexitcode: 0
[2026-01-23 00:01:53] 2026-01-23 05:01:20,086 | INFO     | exeerrorcode: 0
[2026-01-23 00:01:53] 2026-01-23 05:01:20,086 | INFO     | exeerrordiag: 
[2026-01-23 00:01:53] 2026-01-23 05:01:20,086 | INFO     | exitcode: 0
[2026-01-23 00:01:53] 2026-01-23 05:01:20,086 | INFO     | exitmsg: OK
[2026-01-23 00:01:53] 2026-01-23 05:01:20,086 | INFO     | cpuconsumptiontime: 20259 s
[2026-01-23 00:01:53] 2026-01-23 05:01:20,086 | INFO     | nevents: 400
[2026-01-23 00:01:53] 2026-01-23 05:01:20,087 | INFO     | neventsw: 0
[2026-01-23 00:01:53] 2026-01-23 05:01:20,087 | INFO     | pid: 1582888
[2026-01-23 00:01:53] 2026-01-23 05:01:20,087 | INFO     | pgrp: 1582888
[2026-01-23 00:01:53] 2026-01-23 05:01:20,087 | INFO     | corecount: 11
[2026-01-23 00:01:53] 2026-01-23 05:01:20,087 | INFO     | event service: False
[2026-01-23 00:01:53] 2026-01-23 05:01:20,087 | INFO     | sizes: {0: 2284239, 11: 2284239, 2970: 2309643, 2972: 2318697, 2975: 2318867}
[2026-01-23 00:01:53] 2026-01-23 05:01:20,087 | INFO     | --------------------------------------------------
[2026-01-23 00:01:53] 2026-01-23 05:01:20,087 | INFO     | 
[2026-01-23 00:01:53] 2026-01-23 05:01:20,087 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2026-01-23 00:01:53] 2026-01-23 05:01:20,244 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-23 00:01:53] 2026-01-23 05:01:20,244 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-23 00:01:53] 2026-01-23 05:01:20,245 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-23 00:01:53] 2026-01-23 05:01:20,245 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-23 00:01:53] 2026-01-23 05:01:20,245 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-23 00:01:53] 2026-01-23 05:01:20,245 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-23 00:01:53] 2026-01-23 05:01:20,245 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-23 00:01:53] 2026-01-23 05:01:20,245 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-23 00:01:53] 2026-01-23 05:01:20,245 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-23 00:01:53] 2026-01-23 05:01:20,245 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-23 00:01:53] 2026-01-23 05:01:20,245 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-23 00:01:53] 2026-01-23 05:01:20,245 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-23 00:01:53] 2026-01-23 05:01:20,245 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-23 00:01:53] 2026-01-23 05:01:20,245 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-23 00:01:53] 2026-01-23 05:01:20,245 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-23 00:01:53] 2026-01-23 05:01:20,245 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-23 00:01:53] 2026-01-23 05:01:20,245 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-23 00:01:53] 2026-01-23 05:01:20,245 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-23 00:01:53] 2026-01-23 05:01:20,245 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-23 00:01:53] 2026-01-23 05:01:20,245 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-23 00:01:53] 2026-01-23 05:01:20,245 | INFO     | job 6977571111 has completed (purged errors)
[2026-01-23 00:01:53] 2026-01-23 05:01:20,245 | INFO     | overall cleanup function is called
[2026-01-23 00:01:53] 2026-01-23 05:01:21,253 | INFO     | --- collectZombieJob: --- 10, [1582888]
[2026-01-23 00:01:53] 2026-01-23 05:01:21,253 | INFO     | zombie collector waiting for pid 1582888
[2026-01-23 00:01:53] 2026-01-23 05:01:21,253 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-23 00:01:53] 2026-01-23 05:01:21,253 | INFO     | collected zombie processes
[2026-01-23 00:01:53] 2026-01-23 05:01:21,253 | INFO     | will attempt to kill all subprocesses of pid=1582888
[2026-01-23 00:01:53] 2026-01-23 05:01:22,430 | INFO     | process IDs to be killed: [1582888] (in reverse order)
[2026-01-23 00:01:53] 2026-01-23 05:01:22,679 | WARNING  | found no corresponding commands to process id(s)
[2026-01-23 00:01:53] 2026-01-23 05:01:22,679 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-23 00:01:53] 2026-01-23 05:01:22,705 | INFO     | did not find any defunct processes belonging to 1582888
[2026-01-23 00:01:53] 2026-01-23 05:01:22,730 | INFO     | did not find any defunct processes belonging to 1582888
[2026-01-23 00:01:53] 2026-01-23 05:01:22,730 | INFO     | ready for new job
[2026-01-23 00:01:53] 2026-01-23 05:01:22,730 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-23 00:01:53] 2026-01-23 05:01:22,731 | INFO     | **************************************
[2026-01-23 00:01:53] 2026-01-23 05:01:22,731 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-23 00:01:53] 2026-01-23 05:01:22,731 | INFO     | **************************************
[2026-01-23 00:01:53] 2026-01-23 05:01:22,731 | INFO     | 
[2026-01-23 00:01:53] 2026-01-23 05:01:22,735 | INFO     | architecture information:
[2026-01-23 00:01:53] 2026-01-23 05:01:22,735 | INFO     | executing command: cat /etc/os-release
[2026-01-23 00:01:53] 2026-01-23 05:01:22,746 | INFO     | cat /etc/os-release:
[2026-01-23 00:01:53] NAME="CentOS Linux"
[2026-01-23 00:01:53] VERSION="7 (Core)"
[2026-01-23 00:01:53] ID="centos"
[2026-01-23 00:01:53] ID_LIKE="rhel fedora"
[2026-01-23 00:01:53] VERSION_ID="7"
[2026-01-23 00:01:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-23 00:01:53] ANSI_COLOR="0;31"
[2026-01-23 00:01:53] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-23 00:01:53] HOME_URL="https://www.centos.org/"
[2026-01-23 00:01:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-23 00:01:53] 
[2026-01-23 00:01:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-23 00:01:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-23 00:01:53] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-23 00:01:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-23 00:01:53] 
[2026-01-23 00:01:53] 2026-01-23 05:01:22,746 | INFO     | **************************************
[2026-01-23 00:01:53] 2026-01-23 05:01:23,250 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2026-01-23 00:01:53] 2026-01-23 05:01:23,321 | INFO     | sufficient remaining disk space (91505033216 B)
[2026-01-23 00:01:53] 2026-01-23 05:01:23,321 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-23 00:01:53] 2026-01-23 05:01:23,321 | INFO     | current server update state: UPDATING_FINAL
[2026-01-23 00:01:53] 2026-01-23 05:01:23,321 | INFO     | update_server=False
[2026-01-23 00:01:53] 2026-01-23 05:01:23,321 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-23 00:01:53] 2026-01-23 05:01:23,321 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-23 00:01:53] 2026-01-23 05:01:23,413 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-23 00:01:53] 2026-01-23 05:01:23,477 | INFO     | all job control threads have been joined
[2026-01-23 00:01:53] 2026-01-23 05:01:23,635 | INFO     | all data control threads have been joined
[2026-01-23 00:01:53] 2026-01-23 05:01:23,807 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-23 00:01:53] 2026-01-23 05:01:23,807 | INFO     | aborting loop
[2026-01-23 00:01:53] 2026-01-23 05:01:24,327 | INFO     | [job] retrieve thread has finished
[2026-01-23 00:01:53] 2026-01-23 05:01:24,361 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-23 00:01:53] 2026-01-23 05:01:24,386 | INFO     | all payload control threads have been joined
[2026-01-23 00:01:53] 2026-01-23 05:01:24,483 | INFO     | [job] control thread has finished
[2026-01-23 00:01:53] 2026-01-23 05:01:24,644 | INFO     | [data] control thread has finished
[2026-01-23 00:01:53] 2026-01-23 05:01:24,813 | INFO     | [job] job monitor thread has finished
[2026-01-23 00:01:53] 2026-01-23 05:01:24,860 | INFO     | [payload] validate_pre thread has finished
[2026-01-23 00:01:53] 2026-01-23 05:01:24,988 | INFO     | [payload] execute_payloads thread has finished
[2026-01-23 00:01:53] 2026-01-23 05:01:25,074 | INFO     | [payload] failed_post thread has finished
[2026-01-23 00:01:53] 2026-01-23 05:01:25,099 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-23 00:01:53] 2026-01-23 05:01:25,167 | INFO     | [job] create_data_payload thread has finished
[2026-01-23 00:01:53] 2026-01-23 05:01:25,328 | INFO     | [data] copytool_out thread has finished
[2026-01-23 00:01:53] 2026-01-23 05:01:25,392 | INFO     | [payload] control thread has finished
[2026-01-23 00:01:53] 2026-01-23 05:01:25,472 | INFO     | [data] copytool_in thread has finished
[2026-01-23 00:01:53] 2026-01-23 05:01:25,548 | INFO     | [job] validate thread has finished
[2026-01-23 00:01:53] 2026-01-23 05:01:25,657 | INFO     | [payload] validate_post thread has finished
[2026-01-23 00:01:53] 2026-01-23 05:01:26,105 | INFO     | [job] queue monitor thread has finished
[2026-01-23 00:01:53] 2026-01-23 05:01:27,422 | INFO     | [data] queue_monitor thread has finished
[2026-01-23 00:01:53] 2026-01-23 05:01:37,890 | INFO     | [monitor] cgroup control has ended
[2026-01-23 00:01:53] 2026-01-23 05:01:38,261 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140652931471168)>', '<ExcThread(monitor, started 140652453029632)>']
[2026-01-23 00:01:53] 2026-01-23 05:01:43,287 | INFO     | all workflow threads have been joined
[2026-01-23 00:01:53] 2026-01-23 05:01:43,287 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-23 00:01:53] 2026-01-23 05:01:43,287 | INFO     | traces error code: 0
[2026-01-23 00:01:53] 2026-01-23 05:01:43,287 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-23 00:01:53] 2026-01-23 05:01:52,087 | INFO     | PID=1567226 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-23 00:01:53] 2026-01-23 05:01:52,087 | INFO     | .. there are 34 such processes running
[2026-01-23 00:01:53] 2026-01-23 05:01:52,087 | INFO     | found 0 job(s) in 20 queues
[2026-01-23 00:01:53] 2026-01-23 05:01:52,087 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-23 00:01:53] 2026-01-23 05:01:52,087 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-23 00:01:53] 2026-01-23 05:01:52,087 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-23 00:01:53] 2026-01-23 05:01:52,087 | INFO     | [monitor] control thread has ended
[2026-01-23 00:01:53] 2026-01-23 05:01:52,203 [wrapper] ==== pilot stdout END ====
[2026-01-23 00:01:53] 2026-01-23 05:01:52,221 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-23 00:01:53] 2026-01-23 05:01:52,226 [wrapper] pilotpid: 1567226
[2026-01-23 00:01:53] 2026-01-23 05:01:52,234 [wrapper] Pilot exit status: 0
[2026-01-23 00:01:53] 2026-01-23 05:01:52,470 [wrapper] pandaids: 6977571111
[2026-01-23 00:01:53] 2026-01-23 05:01:52,792 [wrapper] cleanup supervisor_pilot 2021475 1567227
[2026-01-23 00:01:53] 2026-01-23 05:01:52,817 [wrapper] Test setup, not cleaning
[2026-01-23 00:01:53] 2026-01-23 05:01:52,829 [wrapper] apfmon messages muted
[2026-01-23 00:01:53] 2026-01-23 05:01:52,859 [wrapper] ==== wrapper stdout END ====
[2026-01-23 00:01:53] 2026-01-23 05:01:52,899 [wrapper] ==== wrapper stderr END ====
[2026-01-23 00:01:53]  *** Error codes and diagnostics ***
[2026-01-23 00:01:53]     "exeErrorCode": 0,
[2026-01-23 00:01:53]     "exeErrorDiag": "",
[2026-01-23 00:01:53]     "pilotErrorCode": 0,
[2026-01-23 00:01:53]     "pilotErrorDiag": "",
[2026-01-23 00:01:53]  *** Listing of results directory ***
[2026-01-23 00:01:53] total 660576
[2026-01-23 00:01:53] -rw-r--r--. 1 boincer umatlas      5111 Jan 22 07:45 queuedata.json
[2026-01-23 00:01:53] -rw-r--r--. 1 boincer umatlas    584422 Jan 22 07:45 pilot3.tar.gz
[2026-01-23 00:01:53] -rwx------. 1 boincer umatlas     36322 Jan 22 07:45 runpilot2-wrapper.sh
[2026-01-23 00:01:53] -rw-r--r--. 1 boincer umatlas       100 Jan 22 23:10 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-23 00:01:53] -rwxr-xr-x. 1 boincer umatlas      7986 Jan 22 23:10 run_atlas
[2026-01-23 00:01:53] -rw-r--r--. 1 boincer umatlas       105 Jan 22 23:10 job.xml
[2026-01-23 00:01:53] -rw-r--r--. 2 boincer umatlas 494810050 Jan 22 23:10 EVNT.48301084._000156.pool.root.1
[2026-01-23 00:01:53] -rw-r--r--. 2 boincer umatlas     15845 Jan 22 23:10 start_atlas.sh
[2026-01-23 00:01:53] drwxrwx--x. 2 boincer umatlas      4096 Jan 22 23:10 shared
[2026-01-23 00:01:53] -rw-r--r--. 2 boincer umatlas    597758 Jan 22 23:10 input.tar.gz
[2026-01-23 00:01:53] -rw-r--r--. 1 boincer umatlas         0 Jan 22 23:10 boinc_lockfile
[2026-01-23 00:01:53] -rw-r--r--. 1 boincer umatlas      2520 Jan 22 23:10 pandaJob.out
[2026-01-23 00:01:53] -rw-------. 1 boincer umatlas        57 Jan 22 23:10 setup.sh.local
[2026-01-23 00:01:53] -rw-------. 1 boincer umatlas   1003905 Jan 22 23:11 agis_schedconf.cvmfs.json
[2026-01-23 00:01:53] -rw-------. 1 boincer umatlas   1516246 Jan 22 23:11 agis_ddmendpoints.agis.ALL.json
[2026-01-23 00:01:53] -rw-------. 1 boincer umatlas       430 Jan 22 23:11 workernode_map.json
[2026-01-23 00:01:53] drwx------. 5 boincer umatlas      4096 Jan 22 23:11 pilot3
[2026-01-23 00:01:53] -rw-r--r--. 1 boincer umatlas      7169 Jan 22 23:57 init_data.xml
[2026-01-23 00:01:53] -rw-------. 1 boincer umatlas 176054184 Jan 23 00:00 HITS.48301086._007031.pool.root.1
[2026-01-23 00:01:53] -rw-r--r--. 1 boincer umatlas       531 Jan 23 00:00 boinc_task_state.xml
[2026-01-23 00:01:53] -rw-------. 1 boincer umatlas        95 Jan 23 00:00 pilot_heartbeat.json
[2026-01-23 00:01:53] -rw-------. 1 boincer umatlas      1045 Jan 23 00:01 memory_monitor_summary.json
[2026-01-23 00:01:53] -rw-------. 1 boincer umatlas    368883 Jan 23 00:01 log.48301086._007031.job.log.tgz.1
[2026-01-23 00:01:53] -rw-------. 1 boincer umatlas      6350 Jan 23 00:01 heartbeat.json
[2026-01-23 00:01:53] -rw-------. 1 boincer umatlas       823 Jan 23 00:01 pilotlog.txt
[2026-01-23 00:01:53] -rw-r--r--. 1 boincer umatlas        27 Jan 23 00:01 wrapper_checkpoint.txt
[2026-01-23 00:01:53] -rw-r--r--. 1 boincer umatlas      8192 Jan 23 00:01 boinc_mmap_file
[2026-01-23 00:01:53] -rw-------. 1 boincer umatlas    441582 Jan 23 00:01 log.48301086._007031.job.log.1
[2026-01-23 00:01:53] -rw-------. 1 boincer umatlas       357 Jan 23 00:01 output.list
[2026-01-23 00:01:53] -rw-r--r--. 1 boincer umatlas       620 Jan 23 00:01 runtime_log
[2026-01-23 00:01:53] -rw-------. 1 boincer umatlas    829440 Jan 23 00:01 result.tar.gz
[2026-01-23 00:01:53] -rw-------. 1 boincer umatlas       655 Jan 23 00:01 vWJMDmAF928nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmXU0KDm8HPRQn.diag
[2026-01-23 00:01:53] -rw-r--r--. 1 boincer umatlas      9333 Jan 23 00:01 runtime_log.err
[2026-01-23 00:01:53] -rw-r--r--. 1 boincer umatlas     21387 Jan 23 00:01 stderr.txt
[2026-01-23 00:01:53] HITS file was successfully produced:
[2026-01-23 00:01:53] -rw-------. 1 boincer umatlas 176054184 Jan 23 00:00 shared/HITS.pool.root.1
[2026-01-23 00:01:53]  *** Contents of shared directory: ***
[2026-01-23 00:01:53] total 656564
[2026-01-23 00:01:53] -rw-r--r--. 2 boincer umatlas 494810050 Jan 22 23:10 ATLAS.root_0
[2026-01-23 00:01:53] -rw-r--r--. 2 boincer umatlas     15845 Jan 22 23:10 start_atlas.sh
[2026-01-23 00:01:53] -rw-r--r--. 2 boincer umatlas    597758 Jan 22 23:10 input.tar.gz
[2026-01-23 00:01:53] -rw-------. 1 boincer umatlas 176054184 Jan 23 00:00 HITS.pool.root.1
[2026-01-23 00:01:53] -rw-------. 1 boincer umatlas    829440 Jan 23 00:01 result.tar.gz
00:01:55 (1545567): run_atlas exited; CPU time 20356.555744
00:01:55 (1545567): called boinc_finish(0)

</stderr_txt>
]]>

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