Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
22:14:45 (8009): wrapper (7.7.26015): starting
22:14:45 (8009): wrapper: running run_atlas (--nthreads 12)
[2026-01-22 22:14:45] Arguments: --nthreads 12
[2026-01-22 22:14:45] Threads: 12
[2026-01-22 22:14:45] Checking for CVMFS
[2026-01-22 22:14:45] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-22 22:14:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-22 22:14:45] Running cvmfs_config stat atlas.cern.ch
[2026-01-22 22:14:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-22 22:14:45] 2.11.2.0 2981 370602 96004 155419 1 49 12434481 20275200 1 130560 1 157292811 99.952 21942148 16380 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2026-01-22 22:14:45] CVMFS is ok
[2026-01-22 22:14:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-22 22:14:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2026-01-22 22:14:45] Further information can be found at the LHC@home message board.
[2026-01-22 22:14:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-22 22:14:45] Checking for apptainer binary...
[2026-01-22 22:14:45] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-22 22:14:45] Running /usr/bin/apptainer --version
[2026-01-22 22:14:45] apptainer version 1.3.2-1.el7
[2026-01-22 22:14:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-22 22:14:47] c-205-30.aglt2.org
[2026-01-22 22:14:47] apptainer works
[2026-01-22 22:14:47] Set ATHENA_PROC_NUMBER=12
[2026-01-22 22:14:47] Set ATHENA_CORE_NUMBER=12
[2026-01-22 22:14:47] Starting ATLAS job with PandaID=6978068570
[2026-01-22 22:14:47] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-22 23:21:33]  *** The last 200 lines of the pilot log: ***
[2026-01-22 23:21:33]  filetype=log
[2026-01-22 23:21:33]  guid=beac1cba-0c03-481a-9460-c1a987f781a8
[2026-01-22 23:21:33]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-01-22 23:21:33]  is_altstaged=None
[2026-01-22 23:21:33]  is_tar=False
[2026-01-22 23:21:33]  lfn=log.48310670._001161.job.log.tgz.1
[2026-01-22 23:21:33]  mtime=0
[2026-01-22 23:21:33]  protocol_id=None
[2026-01-22 23:21:33]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-22 23:21:33]  replicas=None
[2026-01-22 23:21:33]  scope=mc23_13p6TeV
[2026-01-22 23:21:33]  status=None
[2026-01-22 23:21:33]  status_code=0
[2026-01-22 23:21:33]  storage_token=
[2026-01-22 23:21:33]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6978068570/log.48310670._001161.job.log.tgz.1
[2026-01-22 23:21:33]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/00/cd/log.48310670._001161.job.log.tgz.1
[2026-01-22 23:21:33]  workdir=None
[2026-01-22 23:21:33] ]
[2026-01-22 23:21:33] 2026-01-23 04:21:00,315 | INFO     | transferring file log.48310670._001161.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6978068570/log.48310670._001161.job.log.tgz.1 to /tmp/boinchome/slots/
[2026-01-22 23:21:33] 2026-01-23 04:21:00,315 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6978068570/log.48310670._001161.job.log.tgz.1 /tmp/boinchome/slots/0/log.48310670._001161.job
[2026-01-22 23:21:33] 2026-01-23 04:21:00,336 | INFO     | adding to output.list: log.48310670._001161.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/00/cd/log.48310670._001161.job.log.tg
[2026-01-22 23:21:33] 2026-01-23 04:21:00,337 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-22 23:21:33] 2026-01-23 04:21:00,337 | INFO     | summary of transferred files:
[2026-01-22 23:21:33] 2026-01-23 04:21:00,338 | INFO     |  -- lfn=log.48310670._001161.job.log.tgz.1, status_code=0, status=transferred
[2026-01-22 23:21:33] 2026-01-23 04:21:00,338 | INFO     | stage-out finished correctly
[2026-01-22 23:21:33] 2026-01-23 04:21:00,551 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-22 23:21:33] 2026-01-23 04:21:01,000 | INFO     | job 6978068570 has state=finished
[2026-01-22 23:21:33] 2026-01-23 04:21:01,000 | INFO     | preparing for final server update for job 6978068570 in state='finished'
[2026-01-22 23:21:33] 2026-01-23 04:21:01,001 | INFO     | reading metadata from: /tmp/boinchome/slots/0/PanDA_Pilot-6978068570/jobReport.json
[2026-01-22 23:21:33] 2026-01-23 04:21:01,003 | INFO     | added worker_node to metadata from /tmp/boinchome/slots/0/workernode_map.json
[2026-01-22 23:21:33] 2026-01-23 04:21:01,004 | INFO     | this job has now completed (state=finished)
[2026-01-22 23:21:33] 2026-01-23 04:21:01,004 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-22 23:21:33] 2026-01-23 04:21:01,004 | INFO     | log transfer has been attempted: DONE
[2026-01-22 23:21:33] 2026-01-23 04:21:01,004 | INFO     | job 6978068570 has finished - writing final server update
[2026-01-22 23:21:33] 2026-01-23 04:21:01,005 | INFO     | total number of processed events: 400 (read)
[2026-01-22 23:21:33] 2026-01-23 04:21:01,007 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6978068570/memory_monitor_summary.json (trf name=prmon)
[2026-01-22 23:21:33] 2026-01-23 04:21:01,008 | INFO     | extracted standard info from prmon json
[2026-01-22 23:21:33] 2026-01-23 04:21:01,008 | INFO     | extracted standard memory fields from prmon json
[2026-01-22 23:21:33] 2026-01-23 04:21:01,008 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-22 23:21:33] 2026-01-23 04:21:01,009 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-22 23:21:33] 2026-01-23 04:21:01,009 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-22 23:21:33] 2026-01-23 04:21:01,010 | INFO     | fitting pss+swap vs Time
[2026-01-22 23:21:33] 2026-01-23 04:21:01,010 | INFO     | sum of square deviations: 60482994.5
[2026-01-22 23:21:33] 2026-01-23 04:21:01,011 | INFO     | sum of deviations: 1584512088.0
[2026-01-22 23:21:33] 2026-01-23 04:21:01,011 | INFO     | mean x: 1769140174.5
[2026-01-22 23:21:33] 2026-01-23 04:21:01,011 | INFO     | mean y: 2755869.827586207
[2026-01-22 23:21:33] 2026-01-23 04:21:01,011 | INFO     | intersect: -46344552411.37333
[2026-01-22 23:21:33] 2026-01-23 04:21:01,011 | INFO     | chi2: 0.038862182316983906
[2026-01-22 23:21:33] 2026-01-23 04:21:01,011 | INFO     | current memory leak: 26.20 B/s (using 58 data points, chi2=0.04)
[2026-01-22 23:21:33] 2026-01-23 04:21:01,011 | INFO     | could have reported an average CPU frequency of 1773 MHz (6 samples)
[2026-01-22 23:21:33] 2026-01-23 04:21:01,012 | INFO     | ..............................
[2026-01-22 23:21:33] 2026-01-23 04:21:01,012 | INFO     | . Timing measurements:
[2026-01-22 23:21:33] 2026-01-23 04:21:01,012 | INFO     | . get job = 0 s
[2026-01-22 23:21:33] 2026-01-23 04:21:01,012 | INFO     | . initial setup = 7 s
[2026-01-22 23:21:33] 2026-01-23 04:21:01,012 | INFO     | . payload setup = 6 s
[2026-01-22 23:21:33] 2026-01-23 04:21:01,012 | INFO     | . stage-in = 0 s
[2026-01-22 23:21:33] 2026-01-23 04:21:01,012 | INFO     | . payload execution = 3930 s
[2026-01-22 23:21:33] 2026-01-23 04:21:01,012 | INFO     | . stage-out = 0 s
[2026-01-22 23:21:33] 2026-01-23 04:21:01,012 | INFO     | . log creation = 0 s
[2026-01-22 23:21:33] 2026-01-23 04:21:01,013 | INFO     | ..............................
[2026-01-22 23:21:33] 2026-01-23 04:21:01,089 | INFO     | 
[2026-01-22 23:21:33] 2026-01-23 04:21:01,090 | INFO     | job summary report
[2026-01-22 23:21:33] 2026-01-23 04:21:01,090 | INFO     | --------------------------------------------------
[2026-01-22 23:21:33] 2026-01-23 04:21:01,090 | INFO     | PanDA job id: 6978068570
[2026-01-22 23:21:33] 2026-01-23 04:21:01,090 | INFO     | task id: 48310670
[2026-01-22 23:21:33] 2026-01-23 04:21:01,090 | INFO     | errors: (none)
[2026-01-22 23:21:33] 2026-01-23 04:21:01,090 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-22 23:21:33] 2026-01-23 04:21:01,091 | INFO     | pilot state: finished 
[2026-01-22 23:21:33] 2026-01-23 04:21:01,091 | INFO     | transexitcode: 0
[2026-01-22 23:21:33] 2026-01-23 04:21:01,091 | INFO     | exeerrorcode: 0
[2026-01-22 23:21:33] 2026-01-23 04:21:01,091 | INFO     | exeerrordiag: 
[2026-01-22 23:21:33] 2026-01-23 04:21:01,091 | INFO     | exitcode: 0
[2026-01-22 23:21:33] 2026-01-23 04:21:01,091 | INFO     | exitmsg: OK
[2026-01-22 23:21:33] 2026-01-23 04:21:01,092 | INFO     | cpuconsumptiontime: 42360 s
[2026-01-22 23:21:33] 2026-01-23 04:21:01,092 | INFO     | nevents: 400
[2026-01-22 23:21:33] 2026-01-23 04:21:01,092 | INFO     | neventsw: 0
[2026-01-22 23:21:33] 2026-01-23 04:21:01,092 | INFO     | pid: 16501
[2026-01-22 23:21:33] 2026-01-23 04:21:01,092 | INFO     | pgrp: 16501
[2026-01-22 23:21:33] 2026-01-23 04:21:01,092 | INFO     | corecount: 12
[2026-01-22 23:21:33] 2026-01-23 04:21:01,092 | INFO     | event service: False
[2026-01-22 23:21:33] 2026-01-23 04:21:01,093 | INFO     | sizes: {0: 2284033, 1: 2284239, 11: 2284267, 3941: 2310103, 3942: 2319295}
[2026-01-22 23:21:33] 2026-01-23 04:21:01,093 | INFO     | --------------------------------------------------
[2026-01-22 23:21:33] 2026-01-23 04:21:01,093 | INFO     | 
[2026-01-22 23:21:33] 2026-01-23 04:21:01,093 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2026-01-22 23:21:33] 2026-01-23 04:21:01,118 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-22 23:21:33] 2026-01-23 04:21:01,118 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-22 23:21:33] 2026-01-23 04:21:01,118 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-22 23:21:33] 2026-01-23 04:21:01,119 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-22 23:21:33] 2026-01-23 04:21:01,119 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-22 23:21:33] 2026-01-23 04:21:01,119 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-22 23:21:33] 2026-01-23 04:21:01,119 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-22 23:21:33] 2026-01-23 04:21:01,119 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-22 23:21:33] 2026-01-23 04:21:01,119 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-22 23:21:33] 2026-01-23 04:21:01,120 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-22 23:21:33] 2026-01-23 04:21:01,120 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-22 23:21:33] 2026-01-23 04:21:01,120 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-22 23:21:33] 2026-01-23 04:21:01,120 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-22 23:21:33] 2026-01-23 04:21:01,120 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-22 23:21:33] 2026-01-23 04:21:01,120 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-22 23:21:33] 2026-01-23 04:21:01,121 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-22 23:21:33] 2026-01-23 04:21:01,121 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-22 23:21:33] 2026-01-23 04:21:01,121 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-22 23:21:33] 2026-01-23 04:21:01,121 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-22 23:21:33] 2026-01-23 04:21:01,121 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-22 23:21:33] 2026-01-23 04:21:01,121 | INFO     | job 6978068570 has completed (purged errors)
[2026-01-22 23:21:33] 2026-01-23 04:21:01,121 | INFO     | overall cleanup function is called
[2026-01-22 23:21:33] 2026-01-23 04:21:02,129 | INFO     | --- collectZombieJob: --- 10, [16501]
[2026-01-22 23:21:33] 2026-01-23 04:21:02,130 | INFO     | zombie collector waiting for pid 16501
[2026-01-22 23:21:33] 2026-01-23 04:21:02,130 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-22 23:21:33] 2026-01-23 04:21:02,130 | INFO     | collected zombie processes
[2026-01-22 23:21:33] 2026-01-23 04:21:02,130 | INFO     | will attempt to kill all subprocesses of pid=16501
[2026-01-22 23:21:33] 2026-01-23 04:21:02,224 | INFO     | process IDs to be killed: [16501] (in reverse order)
[2026-01-22 23:21:33] 2026-01-23 04:21:02,278 | WARNING  | found no corresponding commands to process id(s)
[2026-01-22 23:21:33] 2026-01-23 04:21:02,278 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-22 23:21:33] 2026-01-23 04:21:02,281 | INFO     | did not find any defunct processes belonging to 16501
[2026-01-22 23:21:33] 2026-01-23 04:21:02,284 | INFO     | did not find any defunct processes belonging to 16501
[2026-01-22 23:21:33] 2026-01-23 04:21:02,284 | INFO     | ready for new job
[2026-01-22 23:21:33] 2026-01-23 04:21:02,284 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-22 23:21:33] 2026-01-23 04:21:02,285 | INFO     | **************************************
[2026-01-22 23:21:33] 2026-01-23 04:21:02,285 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-22 23:21:33] 2026-01-23 04:21:02,285 | INFO     | **************************************
[2026-01-22 23:21:33] 2026-01-23 04:21:02,285 | INFO     | 
[2026-01-22 23:21:33] 2026-01-23 04:21:02,286 | INFO     | architecture information:
[2026-01-22 23:21:33] 2026-01-23 04:21:02,287 | INFO     | executing command: cat /etc/os-release
[2026-01-22 23:21:33] 2026-01-23 04:21:02,302 | INFO     | cat /etc/os-release:
[2026-01-22 23:21:33] NAME="CentOS Linux"
[2026-01-22 23:21:33] VERSION="7 (Core)"
[2026-01-22 23:21:33] ID="centos"
[2026-01-22 23:21:33] ID_LIKE="rhel fedora"
[2026-01-22 23:21:33] VERSION_ID="7"
[2026-01-22 23:21:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-22 23:21:33] ANSI_COLOR="0;31"
[2026-01-22 23:21:33] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-22 23:21:33] HOME_URL="https://www.centos.org/"
[2026-01-22 23:21:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-22 23:21:33] 
[2026-01-22 23:21:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-22 23:21:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-22 23:21:33] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-22 23:21:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-22 23:21:33] 
[2026-01-22 23:21:33] 2026-01-23 04:21:02,303 | INFO     | **************************************
[2026-01-22 23:21:33] 2026-01-23 04:21:02,806 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2026-01-22 23:21:33] 2026-01-23 04:21:02,822 | INFO     | sufficient remaining disk space (28807528448 B)
[2026-01-22 23:21:33] 2026-01-23 04:21:02,823 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-22 23:21:33] 2026-01-23 04:21:02,823 | INFO     | current server update state: UPDATING_FINAL
[2026-01-22 23:21:33] 2026-01-23 04:21:02,823 | INFO     | update_server=False
[2026-01-22 23:21:33] 2026-01-23 04:21:02,823 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-22 23:21:33] 2026-01-23 04:21:02,824 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-22 23:21:33] 2026-01-23 04:21:02,824 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-22 23:21:33] 2026-01-23 04:21:02,982 | INFO     | all data control threads have been joined
[2026-01-22 23:21:33] 2026-01-23 04:21:03,035 | INFO     | all job control threads have been joined
[2026-01-22 23:21:33] 2026-01-23 04:21:03,037 | INFO     | all payload control threads have been joined
[2026-01-22 23:21:33] 2026-01-23 04:21:03,426 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-22 23:21:33] 2026-01-23 04:21:03,826 | INFO     | [job] queue monitor thread has finished
[2026-01-22 23:21:33] 2026-01-23 04:21:03,829 | INFO     | [job] retrieve thread has finished
[2026-01-22 23:21:33] 2026-01-23 04:21:03,934 | INFO     | [payload] failed_post thread has finished
[2026-01-22 23:21:33] 2026-01-23 04:21:03,983 | INFO     | [data] control thread has finished
[2026-01-22 23:21:33] 2026-01-23 04:21:04,040 | INFO     | [job] control thread has finished
[2026-01-22 23:21:33] 2026-01-23 04:21:04,043 | INFO     | [payload] control thread has finished
[2026-01-22 23:21:33] 2026-01-23 04:21:04,585 | INFO     | [job] validate thread has finished
[2026-01-22 23:21:33] 2026-01-23 04:21:04,818 | INFO     | [job] create_data_payload thread has finished
[2026-01-22 23:21:33] 2026-01-23 04:21:04,831 | INFO     | [payload] validate_pre thread has finished
[2026-01-22 23:21:33] 2026-01-23 04:21:05,007 | INFO     | [data] copytool_in thread has finished
[2026-01-22 23:21:33] 2026-01-23 04:21:05,032 | INFO     | [payload] execute_payloads thread has finished
[2026-01-22 23:21:33] 2026-01-23 04:21:05,208 | INFO     | job.realtimelogging is not enabled
[2026-01-22 23:21:33] 2026-01-23 04:21:05,409 | INFO     | [payload] validate_post thread has finished
[2026-01-22 23:21:33] 2026-01-23 04:21:05,431 | INFO     | [data] copytool_out thread has finished
[2026-01-22 23:21:33] 2026-01-23 04:21:05,691 | WARNING  | process 16501 can no longer be monitored (due to stat problems) - aborting
[2026-01-22 23:21:33] 2026-01-23 04:21:05,765 | INFO     | using path: /tmp/boinchome/slots/0/memory_monitor_summary.json (trf name=prmon)
[2026-01-22 23:21:33] 2026-01-23 04:21:05,852 | INFO     | number of running child processes to parent process 16501: 1
[2026-01-22 23:21:33] 2026-01-23 04:21:05,852 | INFO     | maximum number of monitored processes: 6
[2026-01-22 23:21:33] 2026-01-23 04:21:05,852 | INFO     | aborting job monitoring since job object (job id=6978068570) has expired
[2026-01-22 23:21:33] 2026-01-23 04:21:05,853 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-22 23:21:33] 2026-01-23 04:21:05,853 | INFO     | will abort loop
[2026-01-22 23:21:33] 2026-01-23 04:21:06,213 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-22 23:21:33] 2026-01-23 04:21:06,830 | INFO     | [data] queue_monitor thread has finished
[2026-01-22 23:21:33] 2026-01-23 04:21:06,858 | INFO     | [job] job monitor thread has finished
[2026-01-22 23:21:33] 2026-01-23 04:21:13,471 | INFO     | [monitor] cgroup control has ended
[2026-01-22 23:21:33] 2026-01-23 04:21:13,973 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140163784128320)>', '<ExcThread(monitor, started 140162734470912)>']
[2026-01-22 23:21:33] 2026-01-23 04:21:18,986 | INFO     | all workflow threads have been joined
[2026-01-22 23:21:33] 2026-01-23 04:21:18,986 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-22 23:21:33] 2026-01-23 04:21:18,986 | INFO     | traces error code: 0
[2026-01-22 23:21:33] 2026-01-23 04:21:18,986 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-22 23:21:33] 2026-01-23 04:21:33,302 | INFO     | PID=11981 has CPU usage=4.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2026-01-22 23:21:33] 2026-01-23 04:21:33,302 | INFO     | found 0 job(s) in 20 queues
[2026-01-22 23:21:33] 2026-01-23 04:21:33,302 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-22 23:21:33] 2026-01-23 04:21:33,303 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-22 23:21:33] 2026-01-23 04:21:33,303 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-22 23:21:33] 2026-01-23 04:21:33,303 | INFO     | [monitor] control thread has ended
[2026-01-22 23:21:33] 2026-01-23 04:21:33,387 [wrapper] ==== pilot stdout END ====
[2026-01-22 23:21:33] 2026-01-23 04:21:33,390 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-22 23:21:33] 2026-01-23 04:21:33,394 [wrapper] pilotpid: 11981
[2026-01-22 23:21:33] 2026-01-23 04:21:33,397 [wrapper] Pilot exit status: 0
[2026-01-22 23:21:33] 2026-01-23 04:21:33,413 [wrapper] pandaids: 6978068570
[2026-01-22 23:21:33] 2026-01-23 04:21:33,454 [wrapper] cleanup supervisor_pilot  2327 11982
[2026-01-22 23:21:33] 2026-01-23 04:21:33,458 [wrapper] Test setup, not cleaning
[2026-01-22 23:21:33] 2026-01-23 04:21:33,461 [wrapper] apfmon messages muted
[2026-01-22 23:21:33] 2026-01-23 04:21:33,466 [wrapper] ==== wrapper stdout END ====
[2026-01-22 23:21:33] 2026-01-23 04:21:33,469 [wrapper] ==== wrapper stderr END ====
[2026-01-22 23:21:33]  *** Error codes and diagnostics ***
[2026-01-22 23:21:33]     "exeErrorCode": 0,
[2026-01-22 23:21:33]     "exeErrorDiag": "",
[2026-01-22 23:21:33]     "pilotErrorCode": 0,
[2026-01-22 23:21:33]     "pilotErrorDiag": "",
[2026-01-22 23:21:33]  *** Listing of results directory ***
[2026-01-22 23:21:33] total 665568
[2026-01-22 23:21:33] -rw-r--r-- 1 boincer umatlas    584422 Jan 22 17:19 pilot3.tar.gz
[2026-01-22 23:21:33] -rwx------ 1 boincer umatlas     36322 Jan 22 17:20 runpilot2-wrapper.sh
[2026-01-22 23:21:33] -rw-r--r-- 1 boincer umatlas      5111 Jan 22 17:22 queuedata.json
[2026-01-22 23:21:33] -rw-r--r-- 1 boincer umatlas       100 Jan 22 22:14 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-22 23:21:33] -rwxr-xr-x 1 boincer umatlas      7986 Jan 22 22:14 run_atlas
[2026-01-22 23:21:33] -rw-r--r-- 1 boincer umatlas       105 Jan 22 22:14 job.xml
[2026-01-22 23:21:33] -rw-r--r-- 2 boincer umatlas 495725963 Jan 22 22:14 EVNT.48310665._000024.pool.root.1
[2026-01-22 23:21:33] -rw-r--r-- 2 boincer umatlas     15845 Jan 22 22:14 start_atlas.sh
[2026-01-22 23:21:33] drwxrwx--x 2 boincer umatlas      4096 Jan 22 22:14 shared
[2026-01-22 23:21:33] -rw-r--r-- 2 boincer umatlas    597756 Jan 22 22:14 input.tar.gz
[2026-01-22 23:21:33] -rw-r--r-- 1 boincer umatlas         0 Jan 22 22:14 boinc_lockfile
[2026-01-22 23:21:33] -rw-r--r-- 1 boincer umatlas      2522 Jan 22 22:14 pandaJob.out
[2026-01-22 23:21:33] -rw------- 1 boincer umatlas        57 Jan 22 22:14 setup.sh.local
[2026-01-22 23:21:33] -rw------- 1 boincer umatlas   1003897 Jan 22 22:15 agis_schedconf.cvmfs.json
[2026-01-22 23:21:33] -rw------- 1 boincer umatlas   1516246 Jan 22 22:15 agis_ddmendpoints.agis.ALL.json
[2026-01-22 23:21:33] -rw------- 1 boincer umatlas       445 Jan 22 22:15 workernode_map.json
[2026-01-22 23:21:33] drwx------ 5 boincer umatlas      4096 Jan 22 22:15 pilot3
[2026-01-22 23:21:33] -rw-r--r-- 1 boincer umatlas       531 Jan 22 23:20 boinc_task_state.xml
[2026-01-22 23:21:33] -rw------- 1 boincer umatlas 179961483 Jan 22 23:20 HITS.48310670._001161.pool.root.1
[2026-01-22 23:21:33] -rw-r--r-- 1 boincer umatlas      5952 Jan 22 23:20 init_data.xml
[2026-01-22 23:21:33] -rw------- 1 boincer umatlas        95 Jan 22 23:20 pilot_heartbeat.json
[2026-01-22 23:21:33] -rw------- 1 boincer umatlas      1047 Jan 22 23:20 memory_monitor_summary.json
[2026-01-22 23:21:33] -rw------- 1 boincer umatlas    374254 Jan 22 23:21 log.48310670._001161.job.log.tgz.1
[2026-01-22 23:21:33] -rw------- 1 boincer umatlas      6415 Jan 22 23:21 heartbeat.json
[2026-01-22 23:21:33] -rw-r--r-- 1 boincer umatlas      8192 Jan 22 23:21 boinc_mmap_file
[2026-01-22 23:21:33] -rw-r--r-- 1 boincer umatlas        27 Jan 22 23:21 wrapper_checkpoint.txt
[2026-01-22 23:21:33] -rw------- 1 boincer umatlas       745 Jan 22 23:21 pilotlog.txt
[2026-01-22 23:21:33] -rw------- 1 boincer umatlas    583297 Jan 22 23:21 log.48310670._001161.job.log.1
[2026-01-22 23:21:33] -rw------- 1 boincer umatlas       357 Jan 22 23:21 output.list
[2026-01-22 23:21:33] -rw-r--r-- 1 boincer umatlas       620 Jan 22 23:21 runtime_log
[2026-01-22 23:21:33] -rw------- 1 boincer umatlas    972800 Jan 22 23:21 result.tar.gz
[2026-01-22 23:21:33] -rw-r--r-- 1 boincer umatlas      9343 Jan 22 23:21 runtime_log.err
[2026-01-22 23:21:33] -rw------- 1 boincer umatlas       659 Jan 22 23:21 CmeMDm5DI38nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmPP1KDma7MLcn.diag
[2026-01-22 23:21:33] -rw-r--r-- 1 boincer umatlas     21251 Jan 22 23:21 stderr.txt
[2026-01-22 23:21:33] HITS file was successfully produced:
[2026-01-22 23:21:33] -rw------- 1 boincer umatlas 179961483 Jan 22 23:20 shared/HITS.pool.root.1
[2026-01-22 23:21:33]  *** Contents of shared directory: ***
[2026-01-22 23:21:33] total 661412
[2026-01-22 23:21:33] -rw-r--r-- 2 boincer umatlas 495725963 Jan 22 22:14 ATLAS.root_0
[2026-01-22 23:21:33] -rw-r--r-- 2 boincer umatlas     15845 Jan 22 22:14 start_atlas.sh
[2026-01-22 23:21:33] -rw-r--r-- 2 boincer umatlas    597756 Jan 22 22:14 input.tar.gz
[2026-01-22 23:21:33] -rw------- 1 boincer umatlas 179961483 Jan 22 23:20 HITS.pool.root.1
[2026-01-22 23:21:33] -rw------- 1 boincer umatlas    972800 Jan 22 23:21 result.tar.gz
23:21:35 (8009): run_atlas exited; CPU time 42343.987087
23:21:35 (8009): called boinc_finish(0)

</stderr_txt>
]]>

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