Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
08:48:04 (1775526): wrapper (7.7.26015): starting
08:48:04 (1775526): wrapper: running run_atlas (--nthreads 12)
[2026-01-23 08:48:04] Arguments: --nthreads 12
[2026-01-23 08:48:04] Threads: 12
[2026-01-23 08:48:04] Checking for CVMFS
[2026-01-23 08:48:04] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-23 08:48:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-23 08:48:05] Running cvmfs_config stat atlas.cern.ch
[2026-01-23 08:48:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-23 08:48:05] 2.13.3.0 2626509 2176 56316 155428 2 50 2733460 4096001 0 130560 0 2046936 99.991 52063 1373 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2026-01-23 08:48:05] CVMFS is ok
[2026-01-23 08:48:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2026-01-23 08:48:05] Small home clusters do not require a local http proxy but it is suggested if
[2026-01-23 08:48:05] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2026-01-23 08:48:05] Further information can be found at the LHC@home message board.
[2026-01-23 08:48:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-23 08:48:05] Checking for apptainer binary...
[2026-01-23 08:48:05] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-23 08:48:05] Running /usr/bin/apptainer --version
[2026-01-23 08:48:05] apptainer version 1.4.5
[2026-01-23 08:48:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-23 08:48:05] BoincUbuntu
[2026-01-23 08:48:05] apptainer works
[2026-01-23 08:48:05] Set ATHENA_PROC_NUMBER=12
[2026-01-23 08:48:05] Set ATHENA_CORE_NUMBER=12
[2026-01-23 08:48:05] Starting ATLAS job with PandaID=6977571645
[2026-01-23 08:48:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-23 09:20:33]  *** The last 200 lines of the pilot log: ***
[2026-01-23 09:20:33]  filetype=log
[2026-01-23 09:20:33]  guid=a40f78b5-1bae-4760-a38a-83c3558fc4cb
[2026-01-23 09:20:33]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-01-23 09:20:33]  is_altstaged=None
[2026-01-23 09:20:33]  is_tar=False
[2026-01-23 09:20:33]  lfn=log.48301086._007309.job.log.tgz.1
[2026-01-23 09:20:33]  mtime=0
[2026-01-23 09:20:33]  protocol_id=None
[2026-01-23 09:20:33]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-23 09:20:33]  replicas=None
[2026-01-23 09:20:33]  scope=mc23_13p6TeV
[2026-01-23 09:20:33]  status=None
[2026-01-23 09:20:33]  status_code=0
[2026-01-23 09:20:33]  storage_token=
[2026-01-23 09:20:33]  surl=/var/lib/boinc-client/slots/1/PanDA_Pilot-6977571645/log.48301086._007309.job.log.tgz.1
[2026-01-23 09:20:33]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/da/4a/log.48301086._007309.job.log.tgz.1
[2026-01-23 09:20:33]  workdir=None
[2026-01-23 09:20:33] ]
[2026-01-23 09:20:33] 2026-01-23 09:19:59,251 | INFO     | transferring file log.48301086._007309.job.log.tgz.1 from /var/lib/boinc-client/slots/1/PanDA_Pilot-6977571645/log.48301086._007309.job.log.tgz.1 to /var/lib/boinc
[2026-01-23 09:20:33] 2026-01-23 09:19:59,252 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/1/PanDA_Pilot-6977571645/log.48301086._007309.job.log.tgz.1 /var/lib/boinc-client/slots/1/log.483010
[2026-01-23 09:20:33] 2026-01-23 09:19:59,261 | INFO     | adding to output.list: log.48301086._007309.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/da/4a/log.48301086._007309.job.log.tg
[2026-01-23 09:20:33] 2026-01-23 09:19:59,261 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-23 09:20:33] 2026-01-23 09:19:59,261 | INFO     | summary of transferred files:
[2026-01-23 09:20:33] 2026-01-23 09:19:59,261 | INFO     |  -- lfn=log.48301086._007309.job.log.tgz.1, status_code=0, status=transferred
[2026-01-23 09:20:33] 2026-01-23 09:19:59,261 | INFO     | stage-out finished correctly
[2026-01-23 09:20:33] 2026-01-23 09:20:00,220 | INFO     | time since job start (1907s) is within the limit (349056.0s)
[2026-01-23 09:20:33] 2026-01-23 09:20:00,272 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-23 09:20:33] 2026-01-23 09:20:01,292 | INFO     | monitor loop #150: job 0:6977571645 is in state 'finished'
[2026-01-23 09:20:33] 2026-01-23 09:20:01,292 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-23 09:20:33] 2026-01-23 09:20:02,128 | INFO     | job 6977571645 has state=finished
[2026-01-23 09:20:33] 2026-01-23 09:20:02,128 | INFO     | preparing for final server update for job 6977571645 in state='finished'
[2026-01-23 09:20:33] 2026-01-23 09:20:02,128 | INFO     | reading metadata from: /var/lib/boinc-client/slots/1/PanDA_Pilot-6977571645/jobReport.json
[2026-01-23 09:20:33] 2026-01-23 09:20:02,130 | INFO     | added worker_node to metadata from /var/lib/boinc-client/slots/1/workernode_map.json
[2026-01-23 09:20:33] 2026-01-23 09:20:02,130 | INFO     | this job has now completed (state=finished)
[2026-01-23 09:20:33] 2026-01-23 09:20:02,130 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-23 09:20:33] 2026-01-23 09:20:02,130 | INFO     | log transfer has been attempted: DONE
[2026-01-23 09:20:33] 2026-01-23 09:20:02,130 | INFO     | job 6977571645 has finished - writing final server update
[2026-01-23 09:20:33] 2026-01-23 09:20:02,130 | INFO     | total number of processed events: 400 (read)
[2026-01-23 09:20:33] 2026-01-23 09:20:02,131 | INFO     | using path: /var/lib/boinc-client/slots/1/PanDA_Pilot-6977571645/memory_monitor_summary.json (trf name=prmon)
[2026-01-23 09:20:33] 2026-01-23 09:20:02,132 | INFO     | extracted standard info from prmon json
[2026-01-23 09:20:33] 2026-01-23 09:20:02,132 | INFO     | extracted standard memory fields from prmon json
[2026-01-23 09:20:33] 2026-01-23 09:20:02,132 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-23 09:20:33] 2026-01-23 09:20:02,132 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-23 09:20:33] 2026-01-23 09:20:02,132 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-23 09:20:33] 2026-01-23 09:20:02,132 | INFO     | fitting pss+swap vs Time
[2026-01-23 09:20:33] 2026-01-23 09:20:02,132 | INFO     | sum of square deviations: 4279150.0
[2026-01-23 09:20:33] 2026-01-23 09:20:02,132 | INFO     | sum of deviations: 80470346.0
[2026-01-23 09:20:33] 2026-01-23 09:20:02,132 | INFO     | mean x: 1769159115.5
[2026-01-23 09:20:33] 2026-01-23 09:20:02,132 | INFO     | mean y: 3136954.6666666665
[2026-01-23 09:20:33] 2026-01-23 09:20:02,132 | INFO     | intersect: -33266284812.118546
[2026-01-23 09:20:33] 2026-01-23 09:20:02,132 | INFO     | chi2: 2.4273567674463016e-05
[2026-01-23 09:20:33] 2026-01-23 09:20:02,132 | INFO     | current memory leak: 18.81 B/s (using 24 data points, chi2=0.00)
[2026-01-23 09:20:33] 2026-01-23 09:20:02,133 | INFO     | could have reported an average CPU frequency of 3408 MHz (5 samples)
[2026-01-23 09:20:33] 2026-01-23 09:20:02,133 | INFO     | ..............................
[2026-01-23 09:20:33] 2026-01-23 09:20:02,133 | INFO     | . Timing measurements:
[2026-01-23 09:20:33] 2026-01-23 09:20:02,133 | INFO     | . get job = 0 s
[2026-01-23 09:20:33] 2026-01-23 09:20:02,133 | INFO     | . initial setup = 2 s
[2026-01-23 09:20:33] 2026-01-23 09:20:02,133 | INFO     | . payload setup = 2 s
[2026-01-23 09:20:33] 2026-01-23 09:20:02,133 | INFO     | . stage-in = 0 s
[2026-01-23 09:20:33] 2026-01-23 09:20:02,133 | INFO     | . payload execution = 1887 s
[2026-01-23 09:20:33] 2026-01-23 09:20:02,133 | INFO     | . stage-out = 0 s
[2026-01-23 09:20:33] 2026-01-23 09:20:02,133 | INFO     | . log creation = 0 s
[2026-01-23 09:20:33] 2026-01-23 09:20:02,133 | INFO     | ..............................
[2026-01-23 09:20:33] 2026-01-23 09:20:02,160 | INFO     | 
[2026-01-23 09:20:33] 2026-01-23 09:20:02,160 | INFO     | job summary report
[2026-01-23 09:20:33] 2026-01-23 09:20:02,160 | INFO     | --------------------------------------------------
[2026-01-23 09:20:33] 2026-01-23 09:20:02,160 | INFO     | PanDA job id: 6977571645
[2026-01-23 09:20:33] 2026-01-23 09:20:02,160 | INFO     | task id: 48301086
[2026-01-23 09:20:33] 2026-01-23 09:20:02,160 | INFO     | errors: (none)
[2026-01-23 09:20:33] 2026-01-23 09:20:02,160 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-23 09:20:33] 2026-01-23 09:20:02,160 | INFO     | pilot state: finished 
[2026-01-23 09:20:33] 2026-01-23 09:20:02,160 | INFO     | transexitcode: 0
[2026-01-23 09:20:33] 2026-01-23 09:20:02,160 | INFO     | exeerrorcode: 0
[2026-01-23 09:20:33] 2026-01-23 09:20:02,160 | INFO     | exeerrordiag: 
[2026-01-23 09:20:33] 2026-01-23 09:20:02,160 | INFO     | exitcode: 0
[2026-01-23 09:20:33] 2026-01-23 09:20:02,160 | INFO     | exitmsg: OK
[2026-01-23 09:20:33] 2026-01-23 09:20:02,160 | INFO     | cpuconsumptiontime: 20911 s
[2026-01-23 09:20:33] 2026-01-23 09:20:02,160 | INFO     | nevents: 400
[2026-01-23 09:20:33] 2026-01-23 09:20:02,160 | INFO     | neventsw: 0
[2026-01-23 09:20:33] 2026-01-23 09:20:02,160 | INFO     | pid: 1784457
[2026-01-23 09:20:33] 2026-01-23 09:20:02,160 | INFO     | pgrp: 1784457
[2026-01-23 09:20:33] 2026-01-23 09:20:02,160 | INFO     | corecount: 12
[2026-01-23 09:20:33] 2026-01-23 09:20:02,160 | INFO     | event service: False
[2026-01-23 09:20:33] 2026-01-23 09:20:02,160 | INFO     | sizes: {0: 2283812, 1: 2284273, 11: 2284273, 1893: 2309235, 1894: 2309234, 1895: 2318302, 1896: 2318486, 1898: 2318712}
[2026-01-23 09:20:33] 2026-01-23 09:20:02,160 | INFO     | --------------------------------------------------
[2026-01-23 09:20:33] 2026-01-23 09:20:02,160 | INFO     | 
[2026-01-23 09:20:33] 2026-01-23 09:20:02,160 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/1
[2026-01-23 09:20:33] 2026-01-23 09:20:02,172 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-23 09:20:33] 2026-01-23 09:20:02,173 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-23 09:20:33] 2026-01-23 09:20:02,173 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-23 09:20:33] 2026-01-23 09:20:02,173 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-23 09:20:33] 2026-01-23 09:20:02,173 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-23 09:20:33] 2026-01-23 09:20:02,173 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-23 09:20:33] 2026-01-23 09:20:02,173 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-23 09:20:33] 2026-01-23 09:20:02,173 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-23 09:20:33] 2026-01-23 09:20:02,173 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-23 09:20:33] 2026-01-23 09:20:02,173 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-23 09:20:33] 2026-01-23 09:20:02,173 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-23 09:20:33] 2026-01-23 09:20:02,173 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-23 09:20:33] 2026-01-23 09:20:02,173 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-23 09:20:33] 2026-01-23 09:20:02,173 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-23 09:20:33] 2026-01-23 09:20:02,173 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-23 09:20:33] 2026-01-23 09:20:02,173 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-23 09:20:33] 2026-01-23 09:20:02,173 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-23 09:20:33] 2026-01-23 09:20:02,173 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-23 09:20:33] 2026-01-23 09:20:02,173 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-23 09:20:33] 2026-01-23 09:20:02,173 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-23 09:20:33] 2026-01-23 09:20:02,173 | INFO     | job 6977571645 has completed (purged errors)
[2026-01-23 09:20:33] 2026-01-23 09:20:02,173 | INFO     | overall cleanup function is called
[2026-01-23 09:20:33] 2026-01-23 09:20:03,180 | INFO     | --- collectZombieJob: --- 10, [1784457]
[2026-01-23 09:20:33] 2026-01-23 09:20:03,180 | INFO     | zombie collector waiting for pid 1784457
[2026-01-23 09:20:33] 2026-01-23 09:20:03,180 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-23 09:20:33] 2026-01-23 09:20:03,180 | INFO     | collected zombie processes
[2026-01-23 09:20:33] 2026-01-23 09:20:03,180 | INFO     | will attempt to kill all subprocesses of pid=1784457
[2026-01-23 09:20:33] 2026-01-23 09:20:03,226 | INFO     | process IDs to be killed: [1784457] (in reverse order)
[2026-01-23 09:20:33] 2026-01-23 09:20:03,250 | WARNING  | found no corresponding commands to process id(s)
[2026-01-23 09:20:33] 2026-01-23 09:20:03,250 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-23 09:20:33] 2026-01-23 09:20:03,252 | INFO     | did not find any defunct processes belonging to 1784457
[2026-01-23 09:20:33] 2026-01-23 09:20:03,253 | INFO     | did not find any defunct processes belonging to 1784457
[2026-01-23 09:20:33] 2026-01-23 09:20:03,253 | INFO     | ready for new job
[2026-01-23 09:20:33] 2026-01-23 09:20:03,253 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-23 09:20:33] 2026-01-23 09:20:03,254 | INFO     | **************************************
[2026-01-23 09:20:33] 2026-01-23 09:20:03,254 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-23 09:20:33] 2026-01-23 09:20:03,254 | INFO     | **************************************
[2026-01-23 09:20:33] 2026-01-23 09:20:03,254 | INFO     | 
[2026-01-23 09:20:33] 2026-01-23 09:20:03,254 | INFO     | architecture information:
[2026-01-23 09:20:33] 2026-01-23 09:20:03,255 | INFO     | executing command: cat /etc/os-release
[2026-01-23 09:20:33] 2026-01-23 09:20:03,261 | INFO     | cat /etc/os-release:
[2026-01-23 09:20:33] NAME="CentOS Linux"
[2026-01-23 09:20:33] VERSION="7 (Core)"
[2026-01-23 09:20:33] ID="centos"
[2026-01-23 09:20:33] ID_LIKE="rhel fedora"
[2026-01-23 09:20:33] VERSION_ID="7"
[2026-01-23 09:20:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-23 09:20:33] ANSI_COLOR="0;31"
[2026-01-23 09:20:33] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-23 09:20:33] HOME_URL="https://www.centos.org/"
[2026-01-23 09:20:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-23 09:20:33] 
[2026-01-23 09:20:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-23 09:20:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-23 09:20:33] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-23 09:20:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-23 09:20:33] 
[2026-01-23 09:20:33] 2026-01-23 09:20:03,261 | INFO     | **************************************
[2026-01-23 09:20:33] 2026-01-23 09:20:03,764 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/1
[2026-01-23 09:20:33] 2026-01-23 09:20:03,772 | INFO     | sufficient remaining disk space (287515344896 B)
[2026-01-23 09:20:33] 2026-01-23 09:20:03,773 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-23 09:20:33] 2026-01-23 09:20:03,773 | INFO     | current server update state: UPDATING_FINAL
[2026-01-23 09:20:33] 2026-01-23 09:20:03,773 | INFO     | update_server=False
[2026-01-23 09:20:33] 2026-01-23 09:20:03,773 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-23 09:20:33] 2026-01-23 09:20:03,773 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-23 09:20:33] 2026-01-23 09:20:03,793 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2026-01-23 09:20:33] 2026-01-23 09:20:03,794 | WARNING  | cannot recover job monitoring - aborting pilot
[2026-01-23 09:20:33] 2026-01-23 09:20:03,794 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-23 09:20:33] 2026-01-23 09:20:03,794 | INFO     | will abort loop
[2026-01-23 09:20:33] 2026-01-23 09:20:04,242 | INFO     | all job control threads have been joined
[2026-01-23 09:20:33] 2026-01-23 09:20:04,341 | INFO     | all data control threads have been joined
[2026-01-23 09:20:33] 2026-01-23 09:20:04,778 | INFO     | [job] retrieve thread has finished
[2026-01-23 09:20:33] 2026-01-23 09:20:04,778 | INFO     | [job] queue monitor thread has finished
[2026-01-23 09:20:33] 2026-01-23 09:20:04,787 | INFO     | [payload] failed_post thread has finished
[2026-01-23 09:20:33] 2026-01-23 09:20:04,795 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-23 09:20:33] 2026-01-23 09:20:04,799 | INFO     | [job] job monitor thread has finished
[2026-01-23 09:20:33] 2026-01-23 09:20:04,896 | INFO     | all payload control threads have been joined
[2026-01-23 09:20:33] 2026-01-23 09:20:05,248 | INFO     | [job] control thread has finished
[2026-01-23 09:20:33] 2026-01-23 09:20:05,289 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-23 09:20:33] 2026-01-23 09:20:05,347 | INFO     | [data] control thread has finished
[2026-01-23 09:20:33] 2026-01-23 09:20:05,357 | INFO     | [payload] validate_post thread has finished
[2026-01-23 09:20:33] 2026-01-23 09:20:05,740 | INFO     | [job] validate thread has finished
[2026-01-23 09:20:33] 2026-01-23 09:20:05,815 | INFO     | [job] create_data_payload thread has finished
[2026-01-23 09:20:33] 2026-01-23 09:20:05,901 | INFO     | [payload] validate_pre thread has finished
[2026-01-23 09:20:33] 2026-01-23 09:20:05,901 | INFO     | [payload] control thread has finished
[2026-01-23 09:20:33] 2026-01-23 09:20:06,008 | INFO     | [data] copytool_in thread has finished
[2026-01-23 09:20:33] 2026-01-23 09:20:06,014 | INFO     | [payload] execute_payloads thread has finished
[2026-01-23 09:20:33] 2026-01-23 09:20:06,304 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-23 09:20:33] 2026-01-23 09:20:06,800 | INFO     | [data] copytool_out thread has finished
[2026-01-23 09:20:33] 2026-01-23 09:20:10,310 | INFO     | [data] queue_monitor thread has finished
[2026-01-23 09:20:33] 2026-01-23 09:20:16,220 | INFO     | [monitor] cgroup control has ended
[2026-01-23 09:20:33] 2026-01-23 09:20:17,722 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 136019816625984)>', '<ExcThread(monitor, started 136019198342912)>']
[2026-01-23 09:20:33] 2026-01-23 09:20:22,748 | INFO     | all workflow threads have been joined
[2026-01-23 09:20:33] 2026-01-23 09:20:22,748 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-23 09:20:33] 2026-01-23 09:20:22,748 | INFO     | traces error code: 0
[2026-01-23 09:20:33] 2026-01-23 09:20:22,748 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-23 09:20:33] 2026-01-23 09:20:33,384 | INFO     | PID=1779732 has CPU usage=0.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2026-01-23 09:20:33] 2026-01-23 09:20:33,385 | INFO     | found 0 job(s) in 20 queues
[2026-01-23 09:20:33] 2026-01-23 09:20:33,385 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-23 09:20:33] 2026-01-23 09:20:33,385 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-23 09:20:33] 2026-01-23 09:20:33,385 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-23 09:20:33] 2026-01-23 09:20:33,385 | CRITICAL | thread 'MainThread' is not alive
[2026-01-23 09:20:33] 2026-01-23 09:20:33,385 | INFO     | [monitor] control thread has ended
[2026-01-23 09:20:33] 2026-01-23 09:20:33,423 [wrapper] ==== pilot stdout END ====
[2026-01-23 09:20:33] 2026-01-23 09:20:33,424 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-23 09:20:33] 2026-01-23 09:20:33,425 [wrapper] pilotpid: 1779732
[2026-01-23 09:20:33] 2026-01-23 09:20:33,427 [wrapper] Pilot exit status: 0
[2026-01-23 09:20:33] 2026-01-23 09:20:33,432 [wrapper] pandaids: 6977571645
[2026-01-23 09:20:33] 2026-01-23 09:20:33,447 [wrapper] cleanup supervisor_pilot 1815212 1779733
[2026-01-23 09:20:33] 2026-01-23 09:20:33,449 [wrapper] Test setup, not cleaning
[2026-01-23 09:20:33] 2026-01-23 09:20:33,450 [wrapper] apfmon messages muted
[2026-01-23 09:20:33] 2026-01-23 09:20:33,451 [wrapper] ==== wrapper stdout END ====
[2026-01-23 09:20:33] 2026-01-23 09:20:33,453 [wrapper] ==== wrapper stderr END ====
[2026-01-23 09:20:33]  *** Error codes and diagnostics ***
[2026-01-23 09:20:33]     "exeErrorCode": 0,
[2026-01-23 09:20:33]     "exeErrorDiag": "",
[2026-01-23 09:20:33]     "pilotErrorCode": 0,
[2026-01-23 09:20:33]     "pilotErrorDiag": "",
[2026-01-23 09:20:33]  *** Listing of results directory ***
[2026-01-23 09:20:33] total 663980
[2026-01-23 09:20:33] -rw-r--r-- 1 boinc boinc    584422 Jan 22 12:45 pilot3.tar.gz
[2026-01-23 09:20:33] -rwx------ 1 boinc boinc     36322 Jan 22 12:48 runpilot2-wrapper.sh
[2026-01-23 09:20:33] -rw-r--r-- 1 boinc boinc      5111 Jan 22 12:52 queuedata.json
[2026-01-23 09:20:33] -rw-r--r-- 1 boinc boinc       100 Jan 23 08:48 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-23 09:20:33] -rwxr-xr-x 1 boinc boinc      7986 Jan 23 08:48 run_atlas
[2026-01-23 09:20:33] -rw-r--r-- 1 boinc boinc       105 Jan 23 08:48 job.xml
[2026-01-23 09:20:33] -rw-r--r-- 2 boinc boinc 490432539 Jan 23 08:48 EVNT.48301084._000162.pool.root.1
[2026-01-23 09:20:33] -rw-r--r-- 1 boinc boinc      9654 Jan 23 08:48 init_data.xml
[2026-01-23 09:20:33] drwxrwx--x 2 boinc boinc      4096 Jan 23 08:48 shared
[2026-01-23 09:20:33] -rw-r--r-- 2 boinc boinc    597757 Jan 23 08:48 input.tar.gz
[2026-01-23 09:20:33] -rw-r--r-- 2 boinc boinc     15845 Jan 23 08:48 start_atlas.sh
[2026-01-23 09:20:33] -rw-r--r-- 1 boinc boinc         0 Jan 23 08:48 boinc_lockfile
[2026-01-23 09:20:33] -rw-r--r-- 1 boinc boinc      2520 Jan 23 08:48 pandaJob.out
[2026-01-23 09:20:33] -rw------- 1 boinc boinc   1003905 Jan 23 08:48 agis_schedconf.cvmfs.json
[2026-01-23 09:20:33] -rw------- 1 boinc boinc   1516246 Jan 23 08:48 agis_ddmendpoints.agis.ALL.json
[2026-01-23 09:20:33] -rw------- 1 boinc boinc       423 Jan 23 08:48 workernode_map.json
[2026-01-23 09:20:33] drwx------ 5 boinc boinc      4096 Jan 23 08:48 pilot3
[2026-01-23 09:20:33] -rw------- 1 boinc boinc 184238273 Jan 23 09:19 HITS.48301086._007309.pool.root.1
[2026-01-23 09:20:33] -rw------- 1 boinc boinc      1024 Jan 23 09:19 memory_monitor_summary.json
[2026-01-23 09:20:33] -rw------- 1 boinc boinc    338973 Jan 23 09:19 log.48301086._007309.job.log.tgz.1
[2026-01-23 09:20:33] -rw------- 1 boinc boinc      6274 Jan 23 09:20 heartbeat.json
[2026-01-23 09:20:33] -rw-r--r-- 1 boinc boinc      8192 Jan 23 09:20 boinc_mmap_file
[2026-01-23 09:20:33] -rw-r--r-- 1 boinc boinc        27 Jan 23 09:20 wrapper_checkpoint.txt
[2026-01-23 09:20:33] -rw-r--r-- 1 boinc boinc       530 Jan 23 09:20 boinc_task_state.xml
[2026-01-23 09:20:33] -rw------- 1 boinc boinc       817 Jan 23 09:20 pilotlog.txt
[2026-01-23 09:20:33] -rw------- 1 boinc boinc        95 Jan 23 09:20 pilot_heartbeat.json
[2026-01-23 09:20:33] -rw------- 1 boinc boinc    313785 Jan 23 09:20 log.48301086._007309.job.log.1
[2026-01-23 09:20:33] -rw------- 1 boinc boinc       357 Jan 23 09:20 output.list
[2026-01-23 09:20:33] -rw-r--r-- 1 boinc boinc       620 Jan 23 09:20 runtime_log
[2026-01-23 09:20:33] -rw------- 1 boinc boinc    665600 Jan 23 09:20 result.tar.gz
[2026-01-23 09:20:33] -rw-r--r-- 1 boinc boinc      8910 Jan 23 09:20 runtime_log.err
[2026-01-23 09:20:33] -rw------- 1 boinc boinc       647 Jan 23 09:20 LvgMDmFI928n9Rq4apOajLDm4fhM0noT9bVo0NGKDmU1tKDmtzRNQn.diag
[2026-01-23 09:20:33] -rw-r--r-- 1 boinc boinc     21401 Jan 23 09:20 stderr.txt
[2026-01-23 09:20:33] HITS file was successfully produced:
[2026-01-23 09:20:33] -rw------- 1 boinc boinc 184238273 Jan 23 09:19 shared/HITS.pool.root.1
[2026-01-23 09:20:33]  *** Contents of shared directory: ***
[2026-01-23 09:20:33] total 660124
[2026-01-23 09:20:33] -rw-r--r-- 2 boinc boinc 490432539 Jan 23 08:48 ATLAS.root_0
[2026-01-23 09:20:33] -rw-r--r-- 2 boinc boinc    597757 Jan 23 08:48 input.tar.gz
[2026-01-23 09:20:33] -rw-r--r-- 2 boinc boinc     15845 Jan 23 08:48 start_atlas.sh
[2026-01-23 09:20:33] -rw------- 1 boinc boinc 184238273 Jan 23 09:19 HITS.pool.root.1
[2026-01-23 09:20:33] -rw------- 1 boinc boinc    665600 Jan 23 09:20 result.tar.gz
09:20:34 (1775526): run_atlas exited; CPU time 20917.787213
09:20:34 (1775526): called boinc_finish(0)

</stderr_txt>
]]>

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