Stderr output

<core_client_version>8.2.6</core_client_version>
<![CDATA[
<stderr_txt>
03:54:13 (946060): wrapper (7.7.26015): starting
03:54:13 (946060): wrapper: running run_atlas (--nthreads 4)
[2026-01-24 03:54:13] Arguments: --nthreads 4
[2026-01-24 03:54:13] Threads: 4
[2026-01-24 03:54:13] Checking for CVMFS
[2026-01-24 03:54:13] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-24 03:54:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-24 03:54:13] Running cvmfs_config stat atlas.cern.ch
[2026-01-24 03:54:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-24 03:54:14] 2.13.3.0 80730 5914 47216 155455 2 50 19600020 33554432 0 130560 0 2832173 99.989 169635 197 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://127.0.0.1:25468 1
[2026-01-24 03:54:14] CVMFS is ok
[2026-01-24 03:54:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-24 03:54:14] Checking for apptainer binary...
[2026-01-24 03:54:14] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-24 03:54:14] Running /usr/bin/apptainer --version
[2026-01-24 03:54:14] apptainer version 1.4.5
[2026-01-24 03:54:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-24 03:54:14] INFO: /etc/singularity/ exists; cleanup by system administrator is not complete (see https://apptainer.org/docs/admin/latest/singularity_migration.html) Evangelos-Katikos
[2026-01-24 03:54:14] apptainer works
[2026-01-24 03:54:14] Set ATHENA_PROC_NUMBER=4
[2026-01-24 03:54:14] Set ATHENA_CORE_NUMBER=4
[2026-01-24 03:54:14] Starting ATLAS job with PandaID=6977575596
[2026-01-24 03:54:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/ek/BOINC/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-24 04:50:33]  *** The last 200 lines of the pilot log: ***
[2026-01-24 04:50:33]  filetype=log
[2026-01-24 04:50:33]  guid=f8c55995-f434-48cb-ad2d-b55d564bd7ae
[2026-01-24 04:50:33]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-01-24 04:50:33]  is_altstaged=None
[2026-01-24 04:50:33]  is_tar=False
[2026-01-24 04:50:33]  lfn=log.48301086._007516.job.log.tgz.1
[2026-01-24 04:50:33]  mtime=0
[2026-01-24 04:50:33]  protocol_id=None
[2026-01-24 04:50:33]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-24 04:50:33]  replicas=None
[2026-01-24 04:50:33]  scope=mc23_13p6TeV
[2026-01-24 04:50:33]  status=None
[2026-01-24 04:50:33]  status_code=0
[2026-01-24 04:50:33]  storage_token=
[2026-01-24 04:50:33]  surl=/home/ek/BOINC/slots/1/PanDA_Pilot-6977575596/log.48301086._007516.job.log.tgz.1
[2026-01-24 04:50:33]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/28/a4/log.48301086._007516.job.log.tgz.1
[2026-01-24 04:50:33]  workdir=None
[2026-01-24 04:50:33] ]
[2026-01-24 04:50:33] 2026-01-24 02:49:26,312 | INFO     | transferring file log.48301086._007516.job.log.tgz.1 from /home/ek/BOINC/slots/1/PanDA_Pilot-6977575596/log.48301086._007516.job.log.tgz.1 to /home/ek/BOINC/slots/
[2026-01-24 04:50:33] 2026-01-24 02:49:26,313 | INFO     | executing command: /usr/bin/env mv /home/ek/BOINC/slots/1/PanDA_Pilot-6977575596/log.48301086._007516.job.log.tgz.1 /home/ek/BOINC/slots/1/log.48301086._007516.job
[2026-01-24 04:50:33] 2026-01-24 02:49:26,322 | INFO     | adding to output.list: log.48301086._007516.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/28/a4/log.48301086._007516.job.log.tg
[2026-01-24 04:50:33] 2026-01-24 02:49:26,322 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-24 04:50:33] 2026-01-24 02:49:26,322 | INFO     | summary of transferred files:
[2026-01-24 04:50:33] 2026-01-24 02:49:26,322 | INFO     |  -- lfn=log.48301086._007516.job.log.tgz.1, status_code=0, status=transferred
[2026-01-24 04:50:33] 2026-01-24 02:49:26,322 | INFO     | stage-out finished correctly
[2026-01-24 04:50:33] 2026-01-24 02:49:26,600 | INFO     | monitor loop #254: job 0:6977575596 is in state 'finished'
[2026-01-24 04:50:33] 2026-01-24 02:49:26,600 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2026-01-24 04:50:33] 2026-01-24 02:49:26,626 | INFO     | time since job start (3305s) is within the limit (349056.0s)
[2026-01-24 04:50:33] 2026-01-24 02:49:27,734 | INFO     | PID=949919 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-24 04:50:33] 2026-01-24 02:49:28,699 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-24 04:50:33] 2026-01-24 02:49:28,729 | INFO     | job 6977575596 has state=finished
[2026-01-24 04:50:33] 2026-01-24 02:49:28,729 | INFO     | preparing for final server update for job 6977575596 in state='finished'
[2026-01-24 04:50:33] 2026-01-24 02:49:28,729 | INFO     | reading metadata from: /home/ek/BOINC/slots/1/PanDA_Pilot-6977575596/jobReport.json
[2026-01-24 04:50:33] 2026-01-24 02:49:28,730 | INFO     | added worker_node to metadata from /home/ek/BOINC/slots/1/workernode_map.json
[2026-01-24 04:50:33] 2026-01-24 02:49:28,730 | INFO     | this job has now completed (state=finished)
[2026-01-24 04:50:33] 2026-01-24 02:49:28,730 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-24 04:50:33] 2026-01-24 02:49:28,730 | INFO     | log transfer has been attempted: DONE
[2026-01-24 04:50:33] 2026-01-24 02:49:28,730 | INFO     | job 6977575596 has finished - writing final server update
[2026-01-24 04:50:33] 2026-01-24 02:49:28,730 | INFO     | total number of processed events: 400 (read)
[2026-01-24 04:50:33] 2026-01-24 02:49:28,732 | INFO     | using path: /home/ek/BOINC/slots/1/PanDA_Pilot-6977575596/memory_monitor_summary.json (trf name=prmon)
[2026-01-24 04:50:33] 2026-01-24 02:49:28,732 | INFO     | extracted standard info from prmon json
[2026-01-24 04:50:33] 2026-01-24 02:49:28,732 | INFO     | extracted standard memory fields from prmon json
[2026-01-24 04:50:33] 2026-01-24 02:49:28,732 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-24 04:50:33] 2026-01-24 02:49:28,732 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-24 04:50:33] 2026-01-24 02:49:28,732 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-24 04:50:33] 2026-01-24 02:49:28,733 | INFO     | fitting pss+swap vs Time
[2026-01-24 04:50:33] 2026-01-24 02:49:28,733 | INFO     | sum of square deviations: 32179208.0
[2026-01-24 04:50:33] 2026-01-24 02:49:28,733 | INFO     | sum of deviations: -6612128916.0
[2026-01-24 04:50:33] 2026-01-24 02:49:28,733 | INFO     | mean x: 1769221385.0
[2026-01-24 04:50:33] 2026-01-24 02:49:28,733 | INFO     | mean y: 2542544.0212765955
[2026-01-24 04:50:33] 2026-01-24 02:49:28,733 | INFO     | intersect: 363539142902.98816
[2026-01-24 04:50:33] 2026-01-24 02:49:28,733 | INFO     | chi2: 0.09421625630457868
[2026-01-24 04:50:33] 2026-01-24 02:49:28,733 | INFO     | current memory leak: -205.48 B/s (using 47 data points, chi2=0.09)
[2026-01-24 04:50:33] 2026-01-24 02:49:28,733 | INFO     | could have reported an average CPU frequency of 4025 MHz (5 samples)
[2026-01-24 04:50:33] 2026-01-24 02:49:28,733 | INFO     | ..............................
[2026-01-24 04:50:33] 2026-01-24 02:49:28,733 | INFO     | . Timing measurements:
[2026-01-24 04:50:33] 2026-01-24 02:49:28,733 | INFO     | . get job = 0 s
[2026-01-24 04:50:33] 2026-01-24 02:49:28,733 | INFO     | . initial setup = 3 s
[2026-01-24 04:50:33] 2026-01-24 02:49:28,733 | INFO     | . payload setup = 2 s
[2026-01-24 04:50:33] 2026-01-24 02:49:28,733 | INFO     | . stage-in = 0 s
[2026-01-24 04:50:33] 2026-01-24 02:49:28,733 | INFO     | . payload execution = 3287 s
[2026-01-24 04:50:33] 2026-01-24 02:49:28,733 | INFO     | . stage-out = 0 s
[2026-01-24 04:50:33] 2026-01-24 02:49:28,733 | INFO     | . log creation = 0 s
[2026-01-24 04:50:33] 2026-01-24 02:49:28,733 | INFO     | ..............................
[2026-01-24 04:50:33] 2026-01-24 02:49:28,739 | INFO     | time since job start (3307s) is within the limit (349056.0s)
[2026-01-24 04:50:33] 2026-01-24 02:49:28,760 | INFO     | 
[2026-01-24 04:50:33] 2026-01-24 02:49:28,760 | INFO     | job summary report
[2026-01-24 04:50:33] 2026-01-24 02:49:28,760 | INFO     | --------------------------------------------------
[2026-01-24 04:50:33] 2026-01-24 02:49:28,760 | INFO     | PanDA job id: 6977575596
[2026-01-24 04:50:33] 2026-01-24 02:49:28,760 | INFO     | task id: 48301086
[2026-01-24 04:50:33] 2026-01-24 02:49:28,760 | INFO     | errors: (none)
[2026-01-24 04:50:33] 2026-01-24 02:49:28,760 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-24 04:50:33] 2026-01-24 02:49:28,760 | INFO     | pilot state: finished 
[2026-01-24 04:50:33] 2026-01-24 02:49:28,760 | INFO     | transexitcode: 0
[2026-01-24 04:50:33] 2026-01-24 02:49:28,761 | INFO     | exeerrorcode: 0
[2026-01-24 04:50:33] 2026-01-24 02:49:28,761 | INFO     | exeerrordiag: 
[2026-01-24 04:50:33] 2026-01-24 02:49:28,761 | INFO     | exitcode: 0
[2026-01-24 04:50:33] 2026-01-24 02:49:28,761 | INFO     | exitmsg: OK
[2026-01-24 04:50:33] 2026-01-24 02:49:28,761 | INFO     | cpuconsumptiontime: 12349 s
[2026-01-24 04:50:33] 2026-01-24 02:49:28,761 | INFO     | nevents: 400
[2026-01-24 04:50:33] 2026-01-24 02:49:28,761 | INFO     | neventsw: 0
[2026-01-24 04:50:33] 2026-01-24 02:49:28,761 | INFO     | pid: 954572
[2026-01-24 04:50:33] 2026-01-24 02:49:28,761 | INFO     | pgrp: 954572
[2026-01-24 04:50:33] 2026-01-24 02:49:28,761 | INFO     | corecount: 4
[2026-01-24 04:50:33] 2026-01-24 02:49:28,761 | INFO     | event service: False
[2026-01-24 04:50:33] 2026-01-24 02:49:28,761 | INFO     | sizes: {0: 2284238, 11: 2284238, 3293: 2318957, 3296: 2319183}
[2026-01-24 04:50:33] 2026-01-24 02:49:28,761 | INFO     | --------------------------------------------------
[2026-01-24 04:50:33] 2026-01-24 02:49:28,761 | INFO     | 
[2026-01-24 04:50:33] 2026-01-24 02:49:28,761 | INFO     | executing command: ls -lF /home/ek/BOINC/slots/1
[2026-01-24 04:50:33] 2026-01-24 02:49:28,770 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-24 04:50:33] 2026-01-24 02:49:28,770 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-24 04:50:33] 2026-01-24 02:49:28,770 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-24 04:50:33] 2026-01-24 02:49:28,770 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-24 04:50:33] 2026-01-24 02:49:28,770 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-24 04:50:33] 2026-01-24 02:49:28,770 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-24 04:50:33] 2026-01-24 02:49:28,771 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-24 04:50:33] 2026-01-24 02:49:28,771 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-24 04:50:33] 2026-01-24 02:49:28,771 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-24 04:50:33] 2026-01-24 02:49:28,771 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-24 04:50:33] 2026-01-24 02:49:28,771 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-24 04:50:33] 2026-01-24 02:49:28,771 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-24 04:50:33] 2026-01-24 02:49:28,771 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-24 04:50:33] 2026-01-24 02:49:28,771 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-24 04:50:33] 2026-01-24 02:49:28,771 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-24 04:50:33] 2026-01-24 02:49:28,771 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-24 04:50:33] 2026-01-24 02:49:28,771 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-24 04:50:33] 2026-01-24 02:49:28,771 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-24 04:50:33] 2026-01-24 02:49:28,771 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-24 04:50:33] 2026-01-24 02:49:28,771 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-24 04:50:33] 2026-01-24 02:49:28,771 | INFO     | job 6977575596 has completed (purged errors)
[2026-01-24 04:50:33] 2026-01-24 02:49:28,771 | INFO     | overall cleanup function is called
[2026-01-24 04:50:33] 2026-01-24 02:49:29,777 | INFO     | --- collectZombieJob: --- 10, [954572]
[2026-01-24 04:50:33] 2026-01-24 02:49:29,777 | INFO     | zombie collector waiting for pid 954572
[2026-01-24 04:50:33] 2026-01-24 02:49:29,777 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-24 04:50:33] 2026-01-24 02:49:29,777 | INFO     | collected zombie processes
[2026-01-24 04:50:33] 2026-01-24 02:49:29,777 | INFO     | will attempt to kill all subprocesses of pid=954572
[2026-01-24 04:50:33] 2026-01-24 02:49:29,867 | INFO     | process IDs to be killed: [954572] (in reverse order)
[2026-01-24 04:50:33] 2026-01-24 02:49:29,900 | WARNING  | found no corresponding commands to process id(s)
[2026-01-24 04:50:33] 2026-01-24 02:49:29,900 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-24 04:50:33] 2026-01-24 02:49:29,904 | INFO     | did not find any defunct processes belonging to 954572
[2026-01-24 04:50:33] 2026-01-24 02:49:29,907 | INFO     | did not find any defunct processes belonging to 954572
[2026-01-24 04:50:33] 2026-01-24 02:49:29,907 | INFO     | ready for new job
[2026-01-24 04:50:33] 2026-01-24 02:49:29,907 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-24 04:50:33] 2026-01-24 02:49:29,908 | INFO     | **************************************
[2026-01-24 04:50:33] 2026-01-24 02:49:29,908 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-24 04:50:33] 2026-01-24 02:49:29,908 | INFO     | **************************************
[2026-01-24 04:50:33] 2026-01-24 02:49:29,908 | INFO     | 
[2026-01-24 04:50:33] 2026-01-24 02:49:29,909 | INFO     | architecture information:
[2026-01-24 04:50:33] 2026-01-24 02:49:29,909 | INFO     | executing command: cat /etc/os-release
[2026-01-24 04:50:33] 2026-01-24 02:49:29,916 | INFO     | cat /etc/os-release:
[2026-01-24 04:50:33] NAME="CentOS Linux"
[2026-01-24 04:50:33] VERSION="7 (Core)"
[2026-01-24 04:50:33] ID="centos"
[2026-01-24 04:50:33] ID_LIKE="rhel fedora"
[2026-01-24 04:50:33] VERSION_ID="7"
[2026-01-24 04:50:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-24 04:50:33] ANSI_COLOR="0;31"
[2026-01-24 04:50:33] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-24 04:50:33] HOME_URL="https://www.centos.org/"
[2026-01-24 04:50:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-24 04:50:33] 
[2026-01-24 04:50:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-24 04:50:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-24 04:50:33] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-24 04:50:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-24 04:50:33] 
[2026-01-24 04:50:33] 2026-01-24 02:49:29,916 | INFO     | **************************************
[2026-01-24 04:50:33] 2026-01-24 02:49:30,419 | INFO     | executing command: df -mP /home/ek/BOINC/slots/1
[2026-01-24 04:50:33] 2026-01-24 02:49:30,425 | INFO     | sufficient remaining disk space (66587721728 B)
[2026-01-24 04:50:33] 2026-01-24 02:49:30,426 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-24 04:50:33] 2026-01-24 02:49:30,426 | INFO     | current server update state: UPDATING_FINAL
[2026-01-24 04:50:33] 2026-01-24 02:49:30,426 | INFO     | update_server=False
[2026-01-24 04:50:33] 2026-01-24 02:49:30,426 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-24 04:50:33] 2026-01-24 02:49:30,426 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-24 04:50:33] 2026-01-24 02:49:30,426 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-24 04:50:33] 2026-01-24 02:49:30,426 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-24 04:50:33] 2026-01-24 02:49:30,426 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2026-01-24 04:50:33] 2026-01-24 02:49:30,426 | INFO     | aborting loop
[2026-01-24 04:50:33] 2026-01-24 02:49:30,427 | INFO     | found 0 job(s) in 20 queues
[2026-01-24 04:50:33] 2026-01-24 02:49:30,427 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-24 04:50:33] 2026-01-24 02:49:30,427 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-24 04:50:33] 2026-01-24 02:49:30,934 | INFO     | job.realtimelogging is not enabled
[2026-01-24 04:50:33] 2026-01-24 02:49:30,976 | INFO     | all payload control threads have been joined
[2026-01-24 04:50:33] 2026-01-24 02:49:31,019 | INFO     | all data control threads have been joined
[2026-01-24 04:50:33] 2026-01-24 02:49:31,170 | INFO     | all job control threads have been joined
[2026-01-24 04:50:33] 2026-01-24 02:49:31,431 | INFO     | [job] retrieve thread has finished
[2026-01-24 04:50:33] 2026-01-24 02:49:31,431 | INFO     | [job] job monitor thread has finished
[2026-01-24 04:50:33] 2026-01-24 02:49:31,431 | INFO     | [job] queue monitor thread has finished
[2026-01-24 04:50:33] 2026-01-24 02:49:31,448 | INFO     | [data] copytool_in thread has finished
[2026-01-24 04:50:33] 2026-01-24 02:49:31,735 | INFO     | [payload] validate_post thread has finished
[2026-01-24 04:50:33] 2026-01-24 02:49:31,859 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-24 04:50:33] 2026-01-24 02:49:31,939 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-24 04:50:33] 2026-01-24 02:49:31,982 | INFO     | [payload] control thread has finished
[2026-01-24 04:50:33] 2026-01-24 02:49:32,024 | INFO     | [data] control thread has finished
[2026-01-24 04:50:33] 2026-01-24 02:49:32,175 | INFO     | [job] control thread has finished
[2026-01-24 04:50:33] 2026-01-24 02:49:32,264 | INFO     | [payload] failed_post thread has finished
[2026-01-24 04:50:33] 2026-01-24 02:49:32,728 | INFO     | [job] validate thread has finished
[2026-01-24 04:50:33] 2026-01-24 02:49:32,794 | INFO     | [job] create_data_payload thread has finished
[2026-01-24 04:50:33] 2026-01-24 02:49:32,875 | INFO     | [payload] validate_pre thread has finished
[2026-01-24 04:50:33] 2026-01-24 02:49:32,908 | INFO     | [payload] execute_payloads thread has finished
[2026-01-24 04:50:33] 2026-01-24 02:49:33,864 | INFO     | [data] copytool_out thread has finished
[2026-01-24 04:50:33] 2026-01-24 02:49:34,432 | INFO     | [data] queue_monitor thread has finished
[2026-01-24 04:50:33] 2026-01-24 02:50:26,530 | INFO     | [monitor] cgroup control has ended
[2026-01-24 04:50:33] 2026-01-24 02:50:28,038 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139798269163328)>', '<ExcThread(monitor, started 139797427386112)>']
[2026-01-24 04:50:33] 2026-01-24 02:50:28,713 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-24 04:50:33] 2026-01-24 02:50:28,713 | INFO     | [monitor] control thread has ended
[2026-01-24 04:50:33] 2026-01-24 02:50:33,063 | INFO     | all workflow threads have been joined
[2026-01-24 04:50:33] 2026-01-24 02:50:33,063 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-24 04:50:33] 2026-01-24 02:50:33,063 | INFO     | traces error code: 0
[2026-01-24 04:50:33] 2026-01-24 02:50:33,063 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-24 04:50:33] 2026-01-24 02:50:33,116 [wrapper] ==== pilot stdout END ====
[2026-01-24 04:50:33] 2026-01-24 02:50:33,117 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-24 04:50:33] 2026-01-24 02:50:33,119 [wrapper] pilotpid: 949919
[2026-01-24 04:50:33] 2026-01-24 02:50:33,120 [wrapper] Pilot exit status: 0
[2026-01-24 04:50:33] 2026-01-24 02:50:33,124 [wrapper] pandaids: 6977575596
[2026-01-24 04:50:33] 2026-01-24 02:50:33,146 [wrapper] cleanup supervisor_pilot  988602 949920
[2026-01-24 04:50:33] 2026-01-24 02:50:33,147 [wrapper] Test setup, not cleaning
[2026-01-24 04:50:33] 2026-01-24 02:50:33,148 [wrapper] apfmon messages muted
[2026-01-24 04:50:33] 2026-01-24 02:50:33,150 [wrapper] ==== wrapper stdout END ====
[2026-01-24 04:50:33] 2026-01-24 02:50:33,151 [wrapper] ==== wrapper stderr END ====
[2026-01-24 04:50:33]  *** Error codes and diagnostics ***
[2026-01-24 04:50:33]     "exeErrorCode": 0,
[2026-01-24 04:50:33]     "exeErrorDiag": "",
[2026-01-24 04:50:33]     "pilotErrorCode": 0,
[2026-01-24 04:50:33]     "pilotErrorDiag": "",
[2026-01-24 04:50:33]  *** Listing of results directory ***
[2026-01-24 04:50:33] total 671556
[2026-01-24 04:50:33] -rw-r--r-- 1 ek ek    584422 Jan 22 14:45 pilot3.tar.gz
[2026-01-24 04:50:33] -rwx------ 1 ek ek     36322 Jan 22 14:48 runpilot2-wrapper.sh
[2026-01-24 04:50:33] -rw-r--r-- 1 ek ek      5111 Jan 22 14:52 queuedata.json
[2026-01-24 04:50:33] -rw-rw-r-- 1 ek ek       100 Jan 24 03:54 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-24 04:50:33] -rwxr-xr-x 1 ek ek      7986 Jan 24 03:54 run_atlas
[2026-01-24 04:50:33] -rw-rw-r-- 1 ek ek       105 Jan 24 03:54 job.xml
[2026-01-24 04:50:33] -rw-r--r-- 2 ek ek 501398306 Jan 24 03:54 EVNT.48301084._000166.pool.root.1
[2026-01-24 04:50:33] -rw-r--r-- 2 ek ek    597762 Jan 24 03:54 input.tar.gz
[2026-01-24 04:50:33] -rw-r--r-- 2 ek ek     15845 Jan 24 03:54 start_atlas.sh
[2026-01-24 04:50:33] drwxrwx--x 2 ek ek      4096 Jan 24 03:54 shared
[2026-01-24 04:50:33] -rw-rw-r-- 1 ek ek         0 Jan 24 03:54 boinc_setup_complete
[2026-01-24 04:50:33] -rw-rw-r-- 1 ek ek      9841 Jan 24 03:54 init_data.xml
[2026-01-24 04:50:33] -rw-rw-r-- 1 ek ek         0 Jan 24 03:54 boinc_lockfile
[2026-01-24 04:50:33] -rw-rw-r-- 1 ek ek      2520 Jan 24 03:54 pandaJob.out
[2026-01-24 04:50:33] -rw------- 1 ek ek        50 Jan 24 03:54 setup.sh.local
[2026-01-24 04:50:33] -rw------- 1 ek ek   1004238 Jan 24 03:54 agis_schedconf.cvmfs.json
[2026-01-24 04:50:33] -rw------- 1 ek ek   1516246 Jan 24 03:54 agis_ddmendpoints.agis.ALL.json
[2026-01-24 04:50:33] -rw------- 1 ek ek       433 Jan 24 03:54 workernode_map.json
[2026-01-24 04:50:33] drwx------ 5 ek ek      4096 Jan 24 03:54 pilot3
[2026-01-24 04:50:33] -rw------- 1 ek ek        95 Jan 24 04:48 pilot_heartbeat.json
[2026-01-24 04:50:33] -rw------- 1 ek ek 180826817 Jan 24 04:49 HITS.48301086._007516.pool.root.1
[2026-01-24 04:50:33] -rw-rw-r-- 1 ek ek       530 Jan 24 04:49 boinc_task_state.xml
[2026-01-24 04:50:33] -rw------- 1 ek ek      1028 Jan 24 04:49 memory_monitor_summary.json
[2026-01-24 04:50:33] -rw------- 1 ek ek    249347 Jan 24 04:49 log.48301086._007516.job.log.tgz.1
[2026-01-24 04:50:33] -rw------- 1 ek ek      6335 Jan 24 04:49 heartbeat.json
[2026-01-24 04:50:33] -rw-rw-r-- 1 ek ek      8192 Jan 24 04:50 boinc_mmap_file
[2026-01-24 04:50:33] -rw-rw-r-- 1 ek ek        27 Jan 24 04:50 wrapper_checkpoint.txt
[2026-01-24 04:50:33] -rw------- 1 ek ek      4620 Jan 24 04:50 pilotlog.txt
[2026-01-24 04:50:33] -rw------- 1 ek ek    499349 Jan 24 04:50 log.48301086._007516.job.log.1
[2026-01-24 04:50:33] -rw------- 1 ek ek       357 Jan 24 04:50 output.list
[2026-01-24 04:50:33] -rw-rw-r-- 1 ek ek       620 Jan 24 04:50 runtime_log
[2026-01-24 04:50:33] -rw------- 1 ek ek    768000 Jan 24 04:50 result.tar.gz
[2026-01-24 04:50:33] -rw-rw-r-- 1 ek ek      9501 Jan 24 04:50 runtime_log.err
[2026-01-24 04:50:33] -rw------- 1 ek ek       664 Jan 24 04:50 1j0LDmFI928nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmMd0KDmr6cqqn.diag
[2026-01-24 04:50:33] -rw-rw-r-- 1 ek ek     21100 Jan 24 04:50 stderr.txt
[2026-01-24 04:50:33] HITS file was successfully produced:
[2026-01-24 04:50:33] -rw------- 1 ek ek 180826817 Jan 24 04:49 shared/HITS.pool.root.1
[2026-01-24 04:50:33]  *** Contents of shared directory: ***
[2026-01-24 04:50:33] total 667600
[2026-01-24 04:50:33] -rw-r--r-- 2 ek ek 501398306 Jan 24 03:54 ATLAS.root_0
[2026-01-24 04:50:33] -rw-r--r-- 2 ek ek    597762 Jan 24 03:54 input.tar.gz
[2026-01-24 04:50:33] -rw-r--r-- 2 ek ek     15845 Jan 24 03:54 start_atlas.sh
[2026-01-24 04:50:33] -rw------- 1 ek ek 180826817 Jan 24 04:49 HITS.pool.root.1
[2026-01-24 04:50:33] -rw------- 1 ek ek    768000 Jan 24 04:50 result.tar.gz
04:50:35 (946060): run_atlas exited; CPU time 12380.766337
04:50:35 (946060): called boinc_finish(0)

</stderr_txt>
]]>

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