Stderr output

<core_client_version>8.2.6</core_client_version>
<![CDATA[
<stderr_txt>
04:50:37 (996004): wrapper (7.7.26015): starting
04:50:37 (996004): wrapper: running run_atlas (--nthreads 4)
[2026-01-24 04:50:37] Arguments: --nthreads 4
[2026-01-24 04:50:37] Threads: 4
[2026-01-24 04:50:37] Checking for CVMFS
[2026-01-24 04:50:37] Probing /cvmfs/atlas.cern.ch... OK
[2026-01-24 04:50:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2026-01-24 04:50:37] Running cvmfs_config stat atlas.cern.ch
[2026-01-24 04:50:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2026-01-24 04:50:38] 2.13.3.0 80730 5971 47136 155456 2 50 19610265 33554432 0 130560 0 2871605 99.989 170980 197 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://127.0.0.1:25468 1
[2026-01-24 04:50:38] CVMFS is ok
[2026-01-24 04:50:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2026-01-24 04:50:38] Checking for apptainer binary...
[2026-01-24 04:50:38] Using apptainer found in PATH at /usr/bin/apptainer
[2026-01-24 04:50:38] Running /usr/bin/apptainer --version
[2026-01-24 04:50:38] apptainer version 1.4.5
[2026-01-24 04:50:38] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2026-01-24 04:50:38] INFO: /etc/singularity/ exists; cleanup by system administrator is not complete (see https://apptainer.org/docs/admin/latest/singularity_migration.html) Evangelos-Katikos
[2026-01-24 04:50:38] apptainer works
[2026-01-24 04:50:38] Set ATHENA_PROC_NUMBER=4
[2026-01-24 04:50:38] Set ATHENA_CORE_NUMBER=4
[2026-01-24 04:50:38] Starting ATLAS job with PandaID=6977570841
[2026-01-24 04:50:38] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/ek/BOINC/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2026-01-24 05:47:56]  *** The last 200 lines of the pilot log: ***
[2026-01-24 05:47:56]  filesize=250761
[2026-01-24 05:47:56]  filetype=log
[2026-01-24 05:47:56]  guid=0979252f-d08a-44d9-a85c-550c67a74a2a
[2026-01-24 05:47:56]  inputddms=['NDGF-T1_DATADISK', 'CERN-PROD_DATADISK']
[2026-01-24 05:47:56]  is_altstaged=None
[2026-01-24 05:47:56]  is_tar=False
[2026-01-24 05:47:56]  lfn=log.48301086._006767.job.log.tgz.1
[2026-01-24 05:47:56]  mtime=0
[2026-01-24 05:47:56]  protocol_id=None
[2026-01-24 05:47:56]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2026-01-24 05:47:56]  replicas=None
[2026-01-24 05:47:56]  scope=mc23_13p6TeV
[2026-01-24 05:47:56]  status=None
[2026-01-24 05:47:56]  status_code=0
[2026-01-24 05:47:56]  storage_token=
[2026-01-24 05:47:56]  surl=/home/ek/BOINC/slots/1/PanDA_Pilot-6977570841/log.48301086._006767.job.log.tgz.1
[2026-01-24 05:47:56]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d5/0b/log.48301086._006767.job.log.tgz.1
[2026-01-24 05:47:56]  workdir=None
[2026-01-24 05:47:56] ]
[2026-01-24 05:47:56] 2026-01-24 03:46:57,825 | INFO     | transferring file log.48301086._006767.job.log.tgz.1 from /home/ek/BOINC/slots/1/PanDA_Pilot-6977570841/log.48301086._006767.job.log.tgz.1 to /home/ek/BOINC/slots/
[2026-01-24 05:47:56] 2026-01-24 03:46:57,825 | INFO     | executing command: /usr/bin/env mv /home/ek/BOINC/slots/1/PanDA_Pilot-6977570841/log.48301086._006767.job.log.tgz.1 /home/ek/BOINC/slots/1/log.48301086._006767.job
[2026-01-24 05:47:56] 2026-01-24 03:46:57,834 | INFO     | adding to output.list: log.48301086._006767.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/d5/0b/log.48301086._006767.job.log.tg
[2026-01-24 05:47:56] 2026-01-24 03:46:57,834 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2026-01-24 05:47:56] 2026-01-24 03:46:57,834 | INFO     | summary of transferred files:
[2026-01-24 05:47:56] 2026-01-24 03:46:57,834 | INFO     |  -- lfn=log.48301086._006767.job.log.tgz.1, status_code=0, status=transferred
[2026-01-24 05:47:56] 2026-01-24 03:46:57,834 | INFO     | stage-out finished correctly
[2026-01-24 05:47:56] 2026-01-24 03:46:59,347 | INFO     | time since job start (3374s) is within the limit (349056.0s)
[2026-01-24 05:47:56] 2026-01-24 03:46:59,879 | WARNING  | process 1004663 can no longer be monitored (due to stat problems) - aborting
[2026-01-24 05:47:56] 2026-01-24 03:46:59,879 | INFO     | using path: /home/ek/BOINC/slots/1/PanDA_Pilot-6977570841/memory_monitor_summary.json (trf name=prmon)
[2026-01-24 05:47:56] 2026-01-24 03:46:59,967 | INFO     | number of running child processes to parent process 1004663: 1
[2026-01-24 05:47:56] 2026-01-24 03:46:59,967 | INFO     | maximum number of monitored processes: 6
[2026-01-24 05:47:56] 2026-01-24 03:47:00,193 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2026-01-24 05:47:56] 2026-01-24 03:47:00,221 | INFO     | job 6977570841 has state=finished
[2026-01-24 05:47:56] 2026-01-24 03:47:00,222 | INFO     | preparing for final server update for job 6977570841 in state='finished'
[2026-01-24 05:47:56] 2026-01-24 03:47:00,222 | INFO     | reading metadata from: /home/ek/BOINC/slots/1/PanDA_Pilot-6977570841/jobReport.json
[2026-01-24 05:47:56] 2026-01-24 03:47:00,223 | INFO     | added worker_node to metadata from /home/ek/BOINC/slots/1/workernode_map.json
[2026-01-24 05:47:56] 2026-01-24 03:47:00,223 | INFO     | this job has now completed (state=finished)
[2026-01-24 05:47:56] 2026-01-24 03:47:00,223 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2026-01-24 05:47:56] 2026-01-24 03:47:00,223 | INFO     | log transfer has been attempted: DONE
[2026-01-24 05:47:56] 2026-01-24 03:47:00,223 | INFO     | job 6977570841 has finished - writing final server update
[2026-01-24 05:47:56] 2026-01-24 03:47:00,223 | INFO     | total number of processed events: 400 (read)
[2026-01-24 05:47:56] 2026-01-24 03:47:00,225 | INFO     | using path: /home/ek/BOINC/slots/1/PanDA_Pilot-6977570841/memory_monitor_summary.json (trf name=prmon)
[2026-01-24 05:47:56] 2026-01-24 03:47:00,225 | INFO     | extracted standard info from prmon json
[2026-01-24 05:47:56] 2026-01-24 03:47:00,225 | INFO     | extracted standard memory fields from prmon json
[2026-01-24 05:47:56] 2026-01-24 03:47:00,225 | WARNING  | GPU info not found in prmon json: 'gpu'
[2026-01-24 05:47:56] 2026-01-24 03:47:00,225 | WARNING  | format EVNTtoHITS has no such key: dbData
[2026-01-24 05:47:56] 2026-01-24 03:47:00,225 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2026-01-24 05:47:56] 2026-01-24 03:47:00,225 | INFO     | fitting pss+swap vs Time
[2026-01-24 05:47:56] 2026-01-24 03:47:00,225 | INFO     | sum of square deviations: 34277852.0
[2026-01-24 05:47:56] 2026-01-24 03:47:00,226 | INFO     | sum of deviations: -4523025682.0
[2026-01-24 05:47:56] 2026-01-24 03:47:00,226 | INFO     | mean x: 1769224799.5
[2026-01-24 05:47:56] 2026-01-24 03:47:00,226 | INFO     | mean y: 2461918.0833333335
[2026-01-24 05:47:56] 2026-01-24 03:47:00,226 | INFO     | intersect: 233454931616.879
[2026-01-24 05:47:56] 2026-01-24 03:47:00,226 | INFO     | chi2: 0.1090934001228369
[2026-01-24 05:47:56] 2026-01-24 03:47:00,226 | INFO     | current memory leak: -131.95 B/s (using 48 data points, chi2=0.11)
[2026-01-24 05:47:56] 2026-01-24 03:47:00,226 | INFO     | could have reported an average CPU frequency of 4190 MHz (5 samples)
[2026-01-24 05:47:56] 2026-01-24 03:47:00,226 | INFO     | ..............................
[2026-01-24 05:47:56] 2026-01-24 03:47:00,226 | INFO     | . Timing measurements:
[2026-01-24 05:47:56] 2026-01-24 03:47:00,226 | INFO     | . get job = 0 s
[2026-01-24 05:47:56] 2026-01-24 03:47:00,226 | INFO     | . initial setup = 3 s
[2026-01-24 05:47:56] 2026-01-24 03:47:00,226 | INFO     | . payload setup = 2 s
[2026-01-24 05:47:56] 2026-01-24 03:47:00,226 | INFO     | . stage-in = 0 s
[2026-01-24 05:47:56] 2026-01-24 03:47:00,226 | INFO     | . payload execution = 3354 s
[2026-01-24 05:47:56] 2026-01-24 03:47:00,226 | INFO     | . stage-out = 0 s
[2026-01-24 05:47:56] 2026-01-24 03:47:00,226 | INFO     | . log creation = 0 s
[2026-01-24 05:47:56] 2026-01-24 03:47:00,226 | INFO     | ..............................
[2026-01-24 05:47:56] 2026-01-24 03:47:00,262 | INFO     | 
[2026-01-24 05:47:56] 2026-01-24 03:47:00,262 | INFO     | job summary report
[2026-01-24 05:47:56] 2026-01-24 03:47:00,262 | INFO     | --------------------------------------------------
[2026-01-24 05:47:56] 2026-01-24 03:47:00,262 | INFO     | PanDA job id: 6977570841
[2026-01-24 05:47:56] 2026-01-24 03:47:00,262 | INFO     | task id: 48301086
[2026-01-24 05:47:56] 2026-01-24 03:47:00,262 | INFO     | errors: (none)
[2026-01-24 05:47:56] 2026-01-24 03:47:00,262 | INFO     | status: LOG_TRANSFER = DONE 
[2026-01-24 05:47:56] 2026-01-24 03:47:00,262 | INFO     | pilot state: finished 
[2026-01-24 05:47:56] 2026-01-24 03:47:00,262 | INFO     | transexitcode: 0
[2026-01-24 05:47:56] 2026-01-24 03:47:00,262 | INFO     | exeerrorcode: 0
[2026-01-24 05:47:56] 2026-01-24 03:47:00,262 | INFO     | exeerrordiag: 
[2026-01-24 05:47:56] 2026-01-24 03:47:00,262 | INFO     | exitcode: 0
[2026-01-24 05:47:56] 2026-01-24 03:47:00,262 | INFO     | exitmsg: OK
[2026-01-24 05:47:56] 2026-01-24 03:47:00,262 | INFO     | cpuconsumptiontime: 12620 s
[2026-01-24 05:47:56] 2026-01-24 03:47:00,262 | INFO     | nevents: 400
[2026-01-24 05:47:56] 2026-01-24 03:47:00,262 | INFO     | neventsw: 0
[2026-01-24 05:47:56] 2026-01-24 03:47:00,262 | INFO     | pid: 1004663
[2026-01-24 05:47:56] 2026-01-24 03:47:00,262 | INFO     | pgrp: 1004663
[2026-01-24 05:47:56] 2026-01-24 03:47:00,262 | INFO     | corecount: 4
[2026-01-24 05:47:56] 2026-01-24 03:47:00,262 | INFO     | event service: False
[2026-01-24 05:47:56] 2026-01-24 03:47:00,262 | INFO     | sizes: {0: 2284238, 10: 2284238, 3361: 2309960, 3362: 2318958, 3364: 2319240}
[2026-01-24 05:47:56] 2026-01-24 03:47:00,262 | INFO     | --------------------------------------------------
[2026-01-24 05:47:56] 2026-01-24 03:47:00,262 | INFO     | 
[2026-01-24 05:47:56] 2026-01-24 03:47:00,262 | INFO     | executing command: ls -lF /home/ek/BOINC/slots/1
[2026-01-24 05:47:56] 2026-01-24 03:47:00,271 | INFO     | queue jobs had 0 job(s) [purged]
[2026-01-24 05:47:56] 2026-01-24 03:47:00,271 | INFO     | queue payloads had 0 job(s) [purged]
[2026-01-24 05:47:56] 2026-01-24 03:47:00,271 | INFO     | queue data_in had 0 job(s) [purged]
[2026-01-24 05:47:56] 2026-01-24 03:47:00,271 | INFO     | queue data_out had 0 job(s) [purged]
[2026-01-24 05:47:56] 2026-01-24 03:47:00,271 | INFO     | queue current_data_in had 0 job(s) [purged]
[2026-01-24 05:47:56] 2026-01-24 03:47:00,271 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2026-01-24 05:47:56] 2026-01-24 03:47:00,271 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2026-01-24 05:47:56] 2026-01-24 03:47:00,271 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2026-01-24 05:47:56] 2026-01-24 03:47:00,271 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2026-01-24 05:47:56] 2026-01-24 03:47:00,271 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2026-01-24 05:47:56] 2026-01-24 03:47:00,271 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2026-01-24 05:47:56] 2026-01-24 03:47:00,271 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2026-01-24 05:47:56] 2026-01-24 03:47:00,271 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2026-01-24 05:47:56] 2026-01-24 03:47:00,271 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2026-01-24 05:47:56] 2026-01-24 03:47:00,272 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2026-01-24 05:47:56] 2026-01-24 03:47:00,272 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2026-01-24 05:47:56] 2026-01-24 03:47:00,272 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2026-01-24 05:47:56] 2026-01-24 03:47:00,272 | INFO     | queue completed_jobids has 1 job(s)
[2026-01-24 05:47:56] 2026-01-24 03:47:00,272 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2026-01-24 05:47:56] 2026-01-24 03:47:00,272 | INFO     | queue messages had 0 job(s) [purged]
[2026-01-24 05:47:56] 2026-01-24 03:47:00,272 | INFO     | job 6977570841 has completed (purged errors)
[2026-01-24 05:47:56] 2026-01-24 03:47:00,272 | INFO     | overall cleanup function is called
[2026-01-24 05:47:56] 2026-01-24 03:47:01,278 | INFO     | --- collectZombieJob: --- 10, [1004663]
[2026-01-24 05:47:56] 2026-01-24 03:47:01,279 | INFO     | zombie collector waiting for pid 1004663
[2026-01-24 05:47:56] 2026-01-24 03:47:01,279 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2026-01-24 05:47:56] 2026-01-24 03:47:01,279 | INFO     | collected zombie processes
[2026-01-24 05:47:56] 2026-01-24 03:47:01,279 | INFO     | will attempt to kill all subprocesses of pid=1004663
[2026-01-24 05:47:56] 2026-01-24 03:47:01,368 | INFO     | process IDs to be killed: [1004663] (in reverse order)
[2026-01-24 05:47:56] 2026-01-24 03:47:01,398 | WARNING  | found no corresponding commands to process id(s)
[2026-01-24 05:47:56] 2026-01-24 03:47:01,398 | INFO     | Do not look for orphan processes in BOINC jobs
[2026-01-24 05:47:56] 2026-01-24 03:47:01,401 | INFO     | did not find any defunct processes belonging to 1004663
[2026-01-24 05:47:56] 2026-01-24 03:47:01,403 | INFO     | did not find any defunct processes belonging to 1004663
[2026-01-24 05:47:56] 2026-01-24 03:47:01,404 | INFO     | ready for new job
[2026-01-24 05:47:56] 2026-01-24 03:47:01,404 | INFO     | pilot has finished with previous job - re-establishing logging
[2026-01-24 05:47:56] 2026-01-24 03:47:01,404 | INFO     | **************************************
[2026-01-24 05:47:56] 2026-01-24 03:47:01,404 | INFO     | ***  PanDA Pilot version 3.11.3.9  ***
[2026-01-24 05:47:56] 2026-01-24 03:47:01,404 | INFO     | **************************************
[2026-01-24 05:47:56] 2026-01-24 03:47:01,404 | INFO     | 
[2026-01-24 05:47:56] 2026-01-24 03:47:01,405 | INFO     | architecture information:
[2026-01-24 05:47:56] 2026-01-24 03:47:01,405 | INFO     | executing command: cat /etc/os-release
[2026-01-24 05:47:56] 2026-01-24 03:47:01,410 | INFO     | cat /etc/os-release:
[2026-01-24 05:47:56] NAME="CentOS Linux"
[2026-01-24 05:47:56] VERSION="7 (Core)"
[2026-01-24 05:47:56] ID="centos"
[2026-01-24 05:47:56] ID_LIKE="rhel fedora"
[2026-01-24 05:47:56] VERSION_ID="7"
[2026-01-24 05:47:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2026-01-24 05:47:56] ANSI_COLOR="0;31"
[2026-01-24 05:47:56] CPE_NAME="cpe:/o:centos:centos:7"
[2026-01-24 05:47:56] HOME_URL="https://www.centos.org/"
[2026-01-24 05:47:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2026-01-24 05:47:56] 
[2026-01-24 05:47:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2026-01-24 05:47:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2026-01-24 05:47:56] REDHAT_SUPPORT_PRODUCT="centos"
[2026-01-24 05:47:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2026-01-24 05:47:56] 
[2026-01-24 05:47:56] 2026-01-24 03:47:01,411 | INFO     | **************************************
[2026-01-24 05:47:56] 2026-01-24 03:47:01,913 | INFO     | executing command: df -mP /home/ek/BOINC/slots/1
[2026-01-24 05:47:56] 2026-01-24 03:47:01,920 | INFO     | sufficient remaining disk space (67053289472 B)
[2026-01-24 05:47:56] 2026-01-24 03:47:01,921 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2026-01-24 05:47:56] 2026-01-24 03:47:01,921 | INFO     | current server update state: UPDATING_FINAL
[2026-01-24 05:47:56] 2026-01-24 03:47:01,921 | INFO     | update_server=False
[2026-01-24 05:47:56] 2026-01-24 03:47:01,921 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2026-01-24 05:47:56] 2026-01-24 03:47:01,921 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2026-01-24 05:47:56] 2026-01-24 03:47:01,921 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2026-01-24 05:47:56] 2026-01-24 03:47:01,921 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2026-01-24 05:47:56] 2026-01-24 03:47:01,921 | INFO     | aborting loop
[2026-01-24 05:47:56] 2026-01-24 03:47:02,283 | INFO     | all data control threads have been joined
[2026-01-24 05:47:56] 2026-01-24 03:47:02,680 | INFO     | all payload control threads have been joined
[2026-01-24 05:47:56] 2026-01-24 03:47:02,926 | INFO     | [job] retrieve thread has finished
[2026-01-24 05:47:56] 2026-01-24 03:47:02,926 | INFO     | [job] queue monitor thread has finished
[2026-01-24 05:47:56] 2026-01-24 03:47:02,926 | INFO     | [job] job monitor thread has finished
[2026-01-24 05:47:56] 2026-01-24 03:47:03,049 | INFO     | [payload] run_realtimelog thread has finished
[2026-01-24 05:47:56] 2026-01-24 03:47:03,074 | INFO     | [data] copytool_in thread has finished
[2026-01-24 05:47:56] 2026-01-24 03:47:03,288 | INFO     | [data] control thread has finished
[2026-01-24 05:47:56] 2026-01-24 03:47:03,355 | INFO     | all job control threads have been joined
[2026-01-24 05:47:56] 2026-01-24 03:47:03,370 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2026-01-24 05:47:56] 2026-01-24 03:47:03,551 | INFO     | [payload] failed_post thread has finished
[2026-01-24 05:47:56] 2026-01-24 03:47:03,610 | INFO     | [payload] execute_payloads thread has finished
[2026-01-24 05:47:56] 2026-01-24 03:47:03,685 | INFO     | [payload] control thread has finished
[2026-01-24 05:47:56] 2026-01-24 03:47:04,062 | INFO     | [payload] validate_post thread has finished
[2026-01-24 05:47:56] 2026-01-24 03:47:04,276 | INFO     | [job] validate thread has finished
[2026-01-24 05:47:56] 2026-01-24 03:47:04,361 | INFO     | [job] control thread has finished
[2026-01-24 05:47:56] 2026-01-24 03:47:04,385 | INFO     | [job] create_data_payload thread has finished
[2026-01-24 05:47:56] 2026-01-24 03:47:04,386 | INFO     | [payload] validate_pre thread has finished
[2026-01-24 05:47:56] 2026-01-24 03:47:05,376 | INFO     | [data] copytool_out thread has finished
[2026-01-24 05:47:56] 2026-01-24 03:47:05,923 | INFO     | [data] queue_monitor thread has finished
[2026-01-24 05:47:56] 2026-01-24 03:47:32,517 | INFO     | PID=999835 has CPU usage=2.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2026-01-24 05:47:56] 2026-01-24 03:47:32,518 | INFO     | found 0 job(s) in 20 queues
[2026-01-24 05:47:56] 2026-01-24 03:47:32,518 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2026-01-24 05:47:56] 2026-01-24 03:47:32,518 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2026-01-24 05:47:56] 2026-01-24 03:47:50,483 | INFO     | [monitor] cgroup control has ended
[2026-01-24 05:47:56] 2026-01-24 03:47:50,949 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140455254218560)>', '<ExcThread(monitor, started 140454624491264)>']
[2026-01-24 05:47:56] 2026-01-24 03:47:51,612 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2026-01-24 05:47:56] 2026-01-24 03:47:51,612 | INFO     | [monitor] control thread has ended
[2026-01-24 05:47:56] 2026-01-24 03:47:55,975 | INFO     | all workflow threads have been joined
[2026-01-24 05:47:56] 2026-01-24 03:47:55,975 | INFO     | end of generic workflow (traces error code: 0)
[2026-01-24 05:47:56] 2026-01-24 03:47:55,975 | INFO     | traces error code: 0
[2026-01-24 05:47:56] 2026-01-24 03:47:55,975 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2026-01-24 05:47:56] 2026-01-24 03:47:56,028 [wrapper] ==== pilot stdout END ====
[2026-01-24 05:47:56] 2026-01-24 03:47:56,029 [wrapper] ==== wrapper stdout RESUME ====
[2026-01-24 05:47:56] 2026-01-24 03:47:56,031 [wrapper] pilotpid: 999835
[2026-01-24 05:47:56] 2026-01-24 03:47:56,032 [wrapper] Pilot exit status: 0
[2026-01-24 05:47:56] 2026-01-24 03:47:56,039 [wrapper] pandaids: 6977570841
[2026-01-24 05:47:56] 2026-01-24 03:47:56,060 [wrapper] cleanup supervisor_pilot 1038445 999836
[2026-01-24 05:47:56] 2026-01-24 03:47:56,062 [wrapper] Test setup, not cleaning
[2026-01-24 05:47:56] 2026-01-24 03:47:56,063 [wrapper] apfmon messages muted
[2026-01-24 05:47:56] 2026-01-24 03:47:56,064 [wrapper] ==== wrapper stdout END ====
[2026-01-24 05:47:56] 2026-01-24 03:47:56,066 [wrapper] ==== wrapper stderr END ====
[2026-01-24 05:47:56]  *** Error codes and diagnostics ***
[2026-01-24 05:47:56]     "exeErrorCode": 0,
[2026-01-24 05:47:56]     "exeErrorDiag": "",
[2026-01-24 05:47:56]     "pilotErrorCode": 0,
[2026-01-24 05:47:56]     "pilotErrorDiag": "",
[2026-01-24 05:47:56]  *** Listing of results directory ***
[2026-01-24 05:47:56] total 670488
[2026-01-24 05:47:56] -rw-r--r-- 1 ek ek    584422 Jan 22 14:45 pilot3.tar.gz
[2026-01-24 05:47:56] -rwx------ 1 ek ek     36322 Jan 22 14:48 runpilot2-wrapper.sh
[2026-01-24 05:47:56] -rw-r--r-- 1 ek ek      5111 Jan 22 14:52 queuedata.json
[2026-01-24 05:47:56] -rw-rw-r-- 1 ek ek       100 Jan 24 04:50 wrapper_26015_x86_64-pc-linux-gnu
[2026-01-24 05:47:56] -rwxr-xr-x 1 ek ek      7986 Jan 24 04:50 run_atlas
[2026-01-24 05:47:56] -rw-rw-r-- 1 ek ek       105 Jan 24 04:50 job.xml
[2026-01-24 05:47:56] -rw-r--r-- 2 ek ek 496604504 Jan 24 04:50 EVNT.48301084._000136.pool.root.1
[2026-01-24 05:47:56] drwxrwx--x 2 ek ek      4096 Jan 24 04:50 shared
[2026-01-24 05:47:56] -rw-r--r-- 2 ek ek    597760 Jan 24 04:50 input.tar.gz
[2026-01-24 05:47:56] -rw-r--r-- 2 ek ek     15845 Jan 24 04:50 start_atlas.sh
[2026-01-24 05:47:56] -rw-rw-r-- 1 ek ek         0 Jan 24 04:50 boinc_setup_complete
[2026-01-24 05:47:56] -rw-rw-r-- 1 ek ek      9841 Jan 24 04:50 init_data.xml
[2026-01-24 05:47:56] -rw-rw-r-- 1 ek ek         0 Jan 24 04:50 boinc_lockfile
[2026-01-24 05:47:56] -rw-rw-r-- 1 ek ek      2520 Jan 24 04:50 pandaJob.out
[2026-01-24 05:47:56] -rw------- 1 ek ek        50 Jan 24 04:50 setup.sh.local
[2026-01-24 05:47:56] -rw------- 1 ek ek   1004238 Jan 24 04:50 agis_schedconf.cvmfs.json
[2026-01-24 05:47:56] -rw------- 1 ek ek   1516246 Jan 24 04:50 agis_ddmendpoints.agis.ALL.json
[2026-01-24 05:47:56] -rw------- 1 ek ek       432 Jan 24 04:50 workernode_map.json
[2026-01-24 05:47:56] drwx------ 5 ek ek      4096 Jan 24 04:50 pilot3
[2026-01-24 05:47:56] -rw------- 1 ek ek 184501010 Jan 24 05:46 HITS.48301086._006767.pool.root.1
[2026-01-24 05:47:56] -rw-rw-r-- 1 ek ek       530 Jan 24 05:46 boinc_task_state.xml
[2026-01-24 05:47:56] -rw------- 1 ek ek      1018 Jan 24 05:46 memory_monitor_summary.json
[2026-01-24 05:47:56] -rw------- 1 ek ek    250761 Jan 24 05:46 log.48301086._006767.job.log.tgz.1
[2026-01-24 05:47:56] -rw------- 1 ek ek      6315 Jan 24 05:47 heartbeat.json
[2026-01-24 05:47:56] -rw------- 1 ek ek        95 Jan 24 05:47 pilot_heartbeat.json
[2026-01-24 05:47:56] -rw-rw-r-- 1 ek ek      8192 Jan 24 05:47 boinc_mmap_file
[2026-01-24 05:47:56] -rw-rw-r-- 1 ek ek        27 Jan 24 05:47 wrapper_checkpoint.txt
[2026-01-24 05:47:56] -rw------- 1 ek ek      4743 Jan 24 05:47 pilotlog.txt
[2026-01-24 05:47:56] -rw------- 1 ek ek    509280 Jan 24 05:47 log.48301086._006767.job.log.1
[2026-01-24 05:47:56] -rw------- 1 ek ek       357 Jan 24 05:47 output.list
[2026-01-24 05:47:56] -rw-rw-r-- 1 ek ek       620 Jan 24 05:47 runtime_log
[2026-01-24 05:47:56] -rw------- 1 ek ek    778240 Jan 24 05:47 result.tar.gz
[2026-01-24 05:47:56] -rw-rw-r-- 1 ek ek      9501 Jan 24 05:47 runtime_log.err
[2026-01-24 05:47:56] -rw------- 1 ek ek       660 Jan 24 05:47 9RoKDmuH928nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmMb0KDmOlpo2m.diag
[2026-01-24 05:47:56] -rw-rw-r-- 1 ek ek     21063 Jan 24 05:47 stderr.txt
[2026-01-24 05:47:56] HITS file was successfully produced:
[2026-01-24 05:47:56] -rw------- 1 ek ek 184501010 Jan 24 05:46 shared/HITS.pool.root.1
[2026-01-24 05:47:56]  *** Contents of shared directory: ***
[2026-01-24 05:47:56] total 666516
[2026-01-24 05:47:56] -rw-r--r-- 2 ek ek 496604504 Jan 24 04:50 ATLAS.root_0
[2026-01-24 05:47:56] -rw-r--r-- 2 ek ek    597760 Jan 24 04:50 input.tar.gz
[2026-01-24 05:47:56] -rw-r--r-- 2 ek ek     15845 Jan 24 04:50 start_atlas.sh
[2026-01-24 05:47:56] -rw------- 1 ek ek 184501010 Jan 24 05:46 HITS.pool.root.1
[2026-01-24 05:47:56] -rw------- 1 ek ek    778240 Jan 24 05:47 result.tar.gz
05:47:57 (996004): run_atlas exited; CPU time 12652.529696
05:47:57 (996004): called boinc_finish(0)

</stderr_txt>
]]>

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